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Acta Crystallographica Section E: Structure Reports Online logoLink to Acta Crystallographica Section E: Structure Reports Online
. 2011 Apr 22;67(Pt 5):m624–m625. doi: 10.1107/S1600536811014462

A dinuclear zinc complex with (E)-4-dimethyl­amino-N′-(2-hy­droxy­benzyl­idene)benzohydrazide

Jie Ma a, Wei-Zhen Fan a, Li-Rong Lin a,*
PMCID: PMC3089200  PMID: 21754335

Abstract

The title compound, bis­[μ-(E)-2-({2-[4-(dimethyl­amino)­benzo­yl]hydrazinyl­idene}meth­yl)phenolato]bis­[formato­zinc], [Zn2(C16H16N3O2)2(CHO2)2], is a dinuclear ZnII complex containing two ZnII cations, two monovalent anions of a Schiff base ligand, 4-dimethyl­amino-N′-(2-hy­droxy­benzyl­idene)benzohydrazide (L), and two formate ions. Each ZnII atom chelates with the hy­droxy O atom of salicyl­aldehyde, the imine N atom, the carbonyl O atom, the formate carboxyl­ate O atom and the hy­droxy O atom of the salicyl­aldehyde moiety in a symmetry-related unit. The five-coordinate ZnII atoms form a dimeric centrosymmetric unit with a central parallelepiped Zn2O2 core and parallel faces derived from the Schiff base ligands. The crystal packing is stabilized by inter­molecular N—H⋯O hydrogen bonds between the amide N atom and the formate carboxyl­ate O atom.

Related literature

For details of Zn complexes and related applications, see: Shamsipur et al. (2001 ▶); Cametti et al. (2008 ▶); Winter et al. (2009 ▶); Shi et al. (2009 ▶); Rai et al. (2009 ▶). For potential applications in luminescence materials, see: Erxleben (2001 ▶). For recent advances in biosensory and medicinal therapeutic applications of ZnII complexes, see: Drewry & Gunning (2011 ▶). For other applications of Schiff base–zinc complexes, see: Costamagna et al. (1992 ▶); Sunatsuki et al. (2002 ▶); Jiang et al. (2010 ▶); Li et al. (2010 ▶). For details of the synthesis of the Schiff base ligand, see: Pouralimardan et al. (2007 ▶). For related literature on zinc complex applications, see: Consiglio et al. (2010 ▶); Kwok et al. (2004 ▶).graphic file with name e-67-0m624-scheme1.jpg

Experimental

Crystal data

  • [Zn2(C16H16N3O2)2(CHO2)2]

  • M r = 785.41

  • Monoclinic, Inline graphic

  • a = 14.556 (3) Å

  • b = 6.7607 (14) Å

  • c = 17.085 (3) Å

  • β = 101.63 (3)°

  • V = 1646.8 (6) Å3

  • Z = 2

  • Mo Kα radiation

  • μ = 1.52 mm−1

  • T = 173 K

  • 0.10 × 0.10 × 0.08 mm

Data collection

  • Rigaku R-AXIS RAPID diffractometer

  • Absorption correction: multi-scan (ABSCOR; Higashi, 1995 ▶) T min = 0.863, T max = 0.888

  • 13433 measured reflections

  • 3213 independent reflections

  • 2679 reflections with I > 2σ(I)

  • R int = 0.032

Refinement

  • R[F 2 > 2σ(F 2)] = 0.028

  • wR(F 2) = 0.077

  • S = 1.07

  • 3213 reflections

  • 228 parameters

  • H-atom parameters constrained

  • Δρmax = 0.33 e Å−3

  • Δρmin = −0.30 e Å−3

Data collection: RAPID-AUTO (Rigaku, 2004 ▶); cell refinement: RAPID-AUTO; data reduction: RAPID-AUTO; program(s) used to solve structure: SHELXS97 (Sheldrick,2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: SHELXTL (Sheldrick, 2008 ▶); software used to prepare material for publication: SHELXL97.

Supplementary Material

Crystal structure: contains datablocks I, global. DOI: 10.1107/S1600536811014462/jj2088sup1.cif

e-67-0m624-sup1.cif (24.9KB, cif)

Structure factors: contains datablocks I. DOI: 10.1107/S1600536811014462/jj2088Isup2.hkl

e-67-0m624-Isup2.hkl (157.6KB, hkl)

Supplementary material file. DOI: 10.1107/S1600536811014462/jj2088Isup3.cdx

Additional supplementary materials: crystallographic information; 3D view; checkCIF report

Table 1. Hydrogen-bond geometry (Å, °).

D—H⋯A D—H H⋯A D⋯A D—H⋯A
N2—H8⋯O3i 0.88 2.00 2.838 (2) 158

Symmetry code: (i) Inline graphic.

Acknowledgments

This work was supported financially by the Natural Science Foundation of Fujian Province (grant Nos. 2009S0063 and 2010J01048).

supplementary crystallographic information

Comment

Zinc(II) Schiff base compounds, which are thermally stable, structurally diverse and easily modified, have attracted great interest due to their potential applications in luminescence materials (Andrea, 2001), biosensory and medicinal therapeutic (Drewry & Gunning, 2011). As part of our ongoing work in the biosensory area, the title Zn-Schiff base complex was synthesized by solvothermal methods and the crystal structure is herein reported. The title molecule consists of two subparallel, tridentate Schiff base ligands, two five coodinate zinc cations and two formyl groups (from the decomposion of dimethylformamide (DMF)). The center plane assumes a parallelogram geometry which is comprised of the alternate atoms of Zn and O atoms (Fig. 1). Crystal packing is stabilized by weak N—H···O intermolecular hydrogen bonds between the amide nitrogen atom and the formate carboxyl oxygen atom (Table 1).

Experimental

A mixture of ethyl-4-(dimethylamino) benzoate(10 mmol) and hydrazinium hydroxide (50%, 70ml) was stirred at 120 °C for 3h and then filtered. The resulting white residues were recrystallization by ethanol. Then, 2-hydroxybenzaldehyde (2 mmol) was added to the solution of the above powder (2 mmol) in 50 ml ethanol and refluxed for 3h to obtain the crude product. The crude product was purified by recrystallization with the ethanol and dichloromethane mixed solvent(v/v=2:1) to give white solid Schiff base ligand (N-(2-hydroxybenzylidene)-4-(dimethylamino)benzohydrazide, HL) with 85% yield. A DMF solution containing HL (0.2 mmol) and Zn(ClO4)2.6H2O (0.1 mmol) was stirred at room temperature for 5h and then was sealed in a 20 ml Teflon-lined stainless-steel autoclave, which was heated to 110o and kept at this temperature for 35h. Yellow block crystals were obtained after the reactor was cooled to room temperature in about 40h.

Refinement

H atoms were placed at calculated positions with C—H = 0.95 (aromatic), 0.98 (methyl) Å and were refined with Uiso(H)= 1.5 Ueq(C) for methyl H atoms and 1.2 Ueq(C) for aromatic moieties.

Figures

Fig. 1.

Fig. 1.

Thermal ellipsoid plot of the title compound at the 30% probability level. Hydrogen atoms are removed for clarity.

Crystal data

[Zn2(C16H16N3O2)2(CHO2)2] F(000) = 808
Mr = 785.41 Dx = 1.584 Mg m−3
Monoclinic, P21/n Mo Kα radiation, λ = 0.71073 Å
Hall symbol: -P 2yn Cell parameters from 11481 reflections
a = 14.556 (3) Å θ = 6.1–55.0°
b = 6.7607 (14) Å µ = 1.52 mm−1
c = 17.085 (3) Å T = 173 K
β = 101.63 (3)° Block, yellow
V = 1646.8 (6) Å3 0.10 × 0.10 × 0.08 mm
Z = 2

Data collection

Rigaku R-AXIS RAPID diffractometer 3213 independent reflections
Radiation source: Rotating anode 2679 reflections with I > 2σ(I)
graphite Rint = 0.032
ω scans θmax = 26.0°, θmin = 3.3°
Absorption correction: multi-scan (ABSCOR; Higashi, 1995) h = −17→17
Tmin = 0.863, Tmax = 0.888 k = −8→8
13433 measured reflections l = −21→21

Refinement

Refinement on F2 Primary atom site location: structure-invariant direct methods
Least-squares matrix: full Secondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.028 Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.077 H-atom parameters constrained
S = 1.07 w = 1/[σ2(Fo2) + (0.0452P)2 + 0.0838P] where P = (Fo2 + 2Fc2)/3
3213 reflections (Δ/σ)max = 0.002
228 parameters Δρmax = 0.33 e Å−3
0 restraints Δρmin = −0.30 e Å−3

Special details

Geometry. All esds (except the esd in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell esds are taken into account individually in the estimation of esds in distances, angles and torsion angles; correlations between esds in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell esds is used for estimating esds involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > 2sigma(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.

Fractional atomic coordinates and isotropic or equivalent isotropic displacement parameters (Å2)

x y z Uiso*/Ueq
Zn1 0.604524 (15) 0.57545 (3) 0.527904 (16) 0.03564 (10)
O1 0.47575 (10) 0.5761 (2) 0.56269 (10) 0.0401 (4)
N2 0.68239 (11) 0.9705 (2) 0.53175 (12) 0.0381 (4)
H8 0.6959 1.0948 0.5444 0.046*
N1 0.60914 (11) 0.8734 (2) 0.55588 (11) 0.0344 (4)
O2 0.71192 (10) 0.6870 (2) 0.47370 (10) 0.0436 (4)
C11 0.90778 (14) 1.2366 (3) 0.44114 (14) 0.0418 (5)
H11 0.9247 1.3710 0.4520 0.050*
C9 0.80890 (13) 0.9595 (3) 0.45818 (13) 0.0339 (5)
C12 0.95679 (14) 1.1247 (3) 0.39372 (14) 0.0378 (5)
C13 0.92810 (15) 0.9259 (3) 0.37917 (15) 0.0419 (5)
H13 0.9591 0.8446 0.3472 0.050*
C8 0.73176 (13) 0.8649 (3) 0.48804 (13) 0.0347 (5)
C6 0.48425 (14) 0.8912 (3) 0.62988 (14) 0.0378 (5)
N3 1.02861 (13) 1.2013 (3) 0.36293 (13) 0.0476 (5)
C10 0.83602 (14) 1.1570 (3) 0.47224 (14) 0.0385 (5)
H10 0.8042 1.2374 0.5039 0.046*
C1 0.44444 (13) 0.7007 (3) 0.61235 (13) 0.0355 (5)
C7 0.56179 (15) 0.9695 (3) 0.59851 (15) 0.0414 (5)
H7 0.5789 1.1034 0.6106 0.050*
C14 0.85623 (15) 0.8488 (3) 0.41056 (15) 0.0418 (5)
H14 0.8383 0.7151 0.3993 0.050*
C15 1.08257 (17) 1.0784 (4) 0.31949 (17) 0.0560 (7)
H15A 1.1347 1.1554 0.3068 0.084*
H15B 1.0422 1.0322 0.2699 0.084*
H15C 1.1074 0.9642 0.3524 0.084*
C16 1.06386 (17) 1.3985 (3) 0.38441 (18) 0.0547 (6)
H16A 1.0112 1.4911 0.3788 0.082*
H16B 1.1058 1.4389 0.3490 0.082*
H16C 1.0985 1.3987 0.4399 0.082*
C2 0.37002 (15) 0.6489 (4) 0.64826 (15) 0.0461 (6)
H2 0.3428 0.5212 0.6387 0.055*
C3 0.33486 (16) 0.7778 (4) 0.69733 (16) 0.0540 (6)
H3 0.2835 0.7380 0.7202 0.065*
C5 0.44609 (16) 1.0176 (4) 0.68003 (16) 0.0504 (6)
H5 0.4723 1.1458 0.6909 0.060*
C4 0.37272 (17) 0.9632 (4) 0.71382 (16) 0.0559 (7)
H4 0.3483 1.0512 0.7479 0.067*
O3 0.68177 (10) 0.3641 (2) 0.58935 (10) 0.0429 (4)
O4 0.71583 (15) 0.5810 (3) 0.68721 (13) 0.0722 (6)
C17 0.72061 (16) 0.4179 (3) 0.65971 (16) 0.0455 (6)
H17 0.7563 0.3216 0.6933 0.055*

Atomic displacement parameters (Å2)

U11 U22 U33 U12 U13 U23
Zn1 0.03384 (15) 0.02593 (14) 0.04950 (19) −0.00573 (9) 0.01398 (11) −0.00385 (10)
O1 0.0353 (7) 0.0404 (8) 0.0478 (10) −0.0092 (6) 0.0162 (7) −0.0117 (7)
N2 0.0372 (9) 0.0266 (8) 0.0540 (13) −0.0070 (7) 0.0180 (9) −0.0025 (8)
N1 0.0336 (8) 0.0281 (8) 0.0432 (11) −0.0063 (7) 0.0117 (8) 0.0007 (7)
O2 0.0469 (8) 0.0292 (7) 0.0604 (11) −0.0115 (6) 0.0246 (8) −0.0085 (7)
C11 0.0446 (11) 0.0323 (10) 0.0517 (15) −0.0104 (9) 0.0171 (10) −0.0037 (10)
C9 0.0335 (10) 0.0320 (10) 0.0368 (13) −0.0043 (8) 0.0084 (9) 0.0010 (8)
C12 0.0349 (10) 0.0399 (11) 0.0396 (14) −0.0026 (9) 0.0097 (9) 0.0037 (9)
C13 0.0449 (11) 0.0382 (11) 0.0469 (15) −0.0002 (9) 0.0194 (11) −0.0060 (10)
C8 0.0329 (9) 0.0319 (10) 0.0389 (13) −0.0036 (8) 0.0067 (9) 0.0014 (9)
C6 0.0371 (10) 0.0364 (10) 0.0416 (14) −0.0006 (9) 0.0124 (9) −0.0042 (9)
N3 0.0465 (10) 0.0476 (10) 0.0548 (14) −0.0094 (9) 0.0250 (10) −0.0018 (9)
C10 0.0410 (11) 0.0333 (10) 0.0443 (14) −0.0055 (9) 0.0159 (10) −0.0053 (9)
C1 0.0315 (9) 0.0402 (11) 0.0347 (13) −0.0008 (9) 0.0065 (9) −0.0020 (9)
C7 0.0427 (11) 0.0305 (10) 0.0536 (16) −0.0054 (9) 0.0161 (11) −0.0061 (10)
C14 0.0459 (11) 0.0307 (10) 0.0511 (15) −0.0066 (9) 0.0150 (11) −0.0037 (10)
C15 0.0486 (13) 0.0675 (16) 0.0584 (18) −0.0044 (12) 0.0259 (13) −0.0030 (13)
C16 0.0475 (12) 0.0561 (14) 0.0650 (19) −0.0153 (11) 0.0220 (12) −0.0036 (13)
C2 0.0411 (11) 0.0556 (13) 0.0436 (15) −0.0127 (10) 0.0138 (10) −0.0057 (11)
C3 0.0392 (11) 0.0807 (18) 0.0466 (16) −0.0074 (12) 0.0191 (11) −0.0078 (13)
C5 0.0490 (13) 0.0467 (12) 0.0576 (17) −0.0018 (11) 0.0154 (12) −0.0139 (12)
C4 0.0472 (13) 0.0709 (17) 0.0537 (17) 0.0033 (12) 0.0196 (12) −0.0178 (13)
O3 0.0489 (8) 0.0299 (7) 0.0510 (11) −0.0020 (6) 0.0125 (8) −0.0009 (7)
O4 0.1017 (16) 0.0525 (11) 0.0617 (14) −0.0037 (10) 0.0148 (12) −0.0154 (9)
C17 0.0452 (12) 0.0419 (12) 0.0513 (17) −0.0026 (10) 0.0144 (11) 0.0063 (11)

Geometric parameters (Å, °)

Zn1—O3 1.9829 (16) C6—C7 1.444 (3)
Zn1—O1i 2.0204 (16) N3—C15 1.447 (3)
Zn1—N1 2.0681 (17) N3—C16 1.449 (3)
Zn1—O1 2.0776 (15) C10—H10 0.9500
Zn1—O2 2.1104 (15) C1—C2 1.393 (3)
O1—C1 1.339 (2) C7—H7 0.9500
O1—Zn1i 2.0204 (16) C14—H14 0.9500
N2—C8 1.342 (3) C15—H15A 0.9800
N2—N1 1.384 (2) C15—H15B 0.9800
N2—H8 0.8800 C15—H15C 0.9800
N1—C7 1.277 (3) C16—H16A 0.9800
O2—C8 1.250 (2) C16—H16B 0.9800
C11—C10 1.374 (3) C16—H16C 0.9800
C11—C12 1.404 (3) C2—C3 1.378 (3)
C11—H11 0.9500 C2—H2 0.9500
C9—C14 1.387 (3) C3—C4 1.375 (4)
C9—C10 1.399 (3) C3—H3 0.9500
C9—C8 1.470 (3) C5—C4 1.363 (3)
C12—N3 1.364 (3) C5—H5 0.9500
C12—C13 1.415 (3) C4—H4 0.9500
C13—C14 1.371 (3) O3—C17 1.274 (3)
C13—H13 0.9500 O4—C17 1.206 (3)
C6—C5 1.402 (3) C17—H17 0.9500
C6—C1 1.419 (3)
O3—Zn1—O1i 102.64 (7) C11—C10—C9 121.2 (2)
O3—Zn1—N1 126.22 (7) C11—C10—H10 119.4
O1i—Zn1—N1 131.13 (7) C9—C10—H10 119.4
O3—Zn1—O1 107.34 (6) O1—C1—C2 120.97 (18)
O1i—Zn1—O1 78.72 (7) O1—C1—C6 121.88 (18)
N1—Zn1—O1 85.47 (6) C2—C1—C6 117.1 (2)
O3—Zn1—O2 95.66 (6) N1—C7—C6 125.24 (19)
O1i—Zn1—O2 102.13 (6) N1—C7—H7 117.4
N1—Zn1—O2 76.17 (6) C6—C7—H7 117.4
O1—Zn1—O2 156.30 (6) C13—C14—C9 122.20 (19)
C1—O1—Zn1i 125.90 (12) C13—C14—H14 118.9
C1—O1—Zn1 128.65 (12) C9—C14—H14 118.9
Zn1i—O1—Zn1 101.28 (7) N3—C15—H15A 109.5
C8—N2—N1 116.42 (16) N3—C15—H15B 109.5
C8—N2—H8 121.8 H15A—C15—H15B 109.5
N1—N2—H8 121.8 N3—C15—H15C 109.5
C7—N1—N2 117.73 (17) H15A—C15—H15C 109.5
C7—N1—Zn1 129.16 (14) H15B—C15—H15C 109.5
N2—N1—Zn1 112.60 (12) N3—C16—H16A 109.5
C8—O2—Zn1 114.85 (13) N3—C16—H16B 109.5
C10—C11—C12 121.76 (19) H16A—C16—H16B 109.5
C10—C11—H11 119.1 N3—C16—H16C 109.5
C12—C11—H11 119.1 H16A—C16—H16C 109.5
C14—C9—C10 117.34 (18) H16B—C16—H16C 109.5
C14—C9—C8 118.27 (18) C3—C2—C1 121.7 (2)
C10—C9—C8 124.35 (19) C3—C2—H2 119.1
N3—C12—C11 122.44 (19) C1—C2—H2 119.1
N3—C12—C13 121.0 (2) C4—C3—C2 121.3 (2)
C11—C12—C13 116.57 (18) C4—C3—H3 119.4
C14—C13—C12 120.9 (2) C2—C3—H3 119.4
C14—C13—H13 119.5 C4—C5—C6 122.4 (2)
C12—C13—H13 119.5 C4—C5—H5 118.8
O2—C8—N2 119.51 (18) C6—C5—H5 118.8
O2—C8—C9 120.87 (19) C5—C4—C3 118.3 (2)
N2—C8—C9 119.62 (17) C5—C4—H4 120.8
C5—C6—C1 119.1 (2) C3—C4—H4 120.8
C5—C6—C7 116.03 (19) C17—O3—Zn1 112.98 (14)
C1—C6—C7 124.82 (19) O4—C17—O3 125.4 (2)
C12—N3—C15 121.18 (19) O4—C17—H17 117.3
C12—N3—C16 120.76 (19) O3—C17—H17 117.3
C15—N3—C16 117.20 (18)

Symmetry codes: (i) −x+1, −y+1, −z+1.

Hydrogen-bond geometry (Å, °)

D—H···A D—H H···A D···A D—H···A
N2—H8···O3ii 0.88 2.00 2.838 (2) 158.

Symmetry codes: (ii) x, y+1, z.

Footnotes

Supplementary data and figures for this paper are available from the IUCr electronic archives (Reference: JJ2088).

References

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Associated Data

This section collects any data citations, data availability statements, or supplementary materials included in this article.

Supplementary Materials

Crystal structure: contains datablocks I, global. DOI: 10.1107/S1600536811014462/jj2088sup1.cif

e-67-0m624-sup1.cif (24.9KB, cif)

Structure factors: contains datablocks I. DOI: 10.1107/S1600536811014462/jj2088Isup2.hkl

e-67-0m624-Isup2.hkl (157.6KB, hkl)

Supplementary material file. DOI: 10.1107/S1600536811014462/jj2088Isup3.cdx

Additional supplementary materials: crystallographic information; 3D view; checkCIF report


Articles from Acta Crystallographica Section E: Structure Reports Online are provided here courtesy of International Union of Crystallography

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