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Acta Crystallographica Section E: Structure Reports Online logoLink to Acta Crystallographica Section E: Structure Reports Online
. 2011 Apr 29;67(Pt 5):o1279. doi: 10.1107/S160053681101539X

5-Bromo-3-cyclo­hexyl­sulfonyl-2,7-dimethyl-1-benzofuran

Hong Dae Choi a, Pil Ja Seo a, Byeng Wha Son b, Uk Lee b,*
PMCID: PMC3089243  PMID: 21754561

Abstract

In the title compound, C16H19BrO3S, the cyclo­hexyl ring adopts a chair conformation. In the crystal, mol­ecules are linked through weak C—H⋯O hydrogen bonds and Br⋯O contacts [3.211 (1) Å].

Related literature

For the pharmacological activity of benzofuran compounds, see: Aslam et al. (2009); Galal et al. (2009); Khan et al. (2005). For natural products with benzofuran rings, see: Akgul & Anil (2003); Soekamto et al. (2003). For structural studies of related 3-cyclo­hexyl­sulfonyl-5-halo-2-methyl-1-benzofuran derivatives, see: Choi et al. (2011a,b ). For a review of halogen bonding, see: Politzer et al. (2007).graphic file with name e-67-o1279-scheme1.jpg

Experimental

Crystal data

  • C16H19BrO3S

  • M r = 371.28

  • Triclinic, Inline graphic

  • a = 6.6992 (2) Å

  • b = 8.4654 (2) Å

  • c = 14.1065 (3) Å

  • α = 101.773 (1)°

  • β = 99.283 (1)°

  • γ = 92.067 (1)°

  • V = 770.94 (3) Å3

  • Z = 2

  • Mo Kα radiation

  • μ = 2.81 mm−1

  • T = 173 K

  • 0.26 × 0.25 × 0.21 mm

Data collection

  • Bruker SMART APEXII CCD diffractometer

  • Absorption correction: multi-scan (SADABS; Bruker, 2009) T min = 0.525, T max = 0.591

  • 13840 measured reflections

  • 3542 independent reflections

  • 3247 reflections with I > 2σ(I)

  • R int = 0.032

Refinement

  • R[F 2 > 2σ(F 2)] = 0.025

  • wR(F 2) = 0.066

  • S = 1.10

  • 3542 reflections

  • 192 parameters

  • H-atom parameters constrained

  • Δρmax = 0.27 e Å−3

  • Δρmin = −0.59 e Å−3

Data collection: APEX2 (Bruker, 2009); cell refinement: SAINT (Bruker, 2009); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: ORTEP-3 (Farrugia, 1997) and DIAMOND (Brandenburg, 1998); software used to prepare material for publication: SHELXL97.

Supplementary Material

Crystal structure: contains datablocks global, I. DOI: 10.1107/S160053681101539X/lr2008sup1.cif

e-67-o1279-sup1.cif (19.4KB, cif)

Structure factors: contains datablocks I. DOI: 10.1107/S160053681101539X/lr2008Isup2.hkl

e-67-o1279-Isup2.hkl (173.7KB, hkl)

Supplementary material file. DOI: 10.1107/S160053681101539X/lr2008Isup3.cml

Additional supplementary materials: crystallographic information; 3D view; checkCIF report

Table 1. Hydrogen-bond geometry (Å, °).

D—H⋯A D—H H⋯A DA D—H⋯A
C10—H10B⋯O2i 0.98 2.55 3.384 (2) 143

Symmetry code: (i) Inline graphic.

supplementary crystallographic information

Comment

Many compounds containing a benzofuran skeleton have drawn much attention owing to diverse pharmacological properties such as antibacterial and antifungal, antitumor and antiviral, and antimicrobial activities (Aslam et al., 2009, Galal et al., 2009, Khan et al., 2005). These compounds occur in a wide range of natural products (Akgul & Anil, 2003; Soekamto et al., 2003). As a part of our ongoing study of the substituent effect on the solid state structures of 3-cyclohexylsulfonyl-5-halo-2-methyl-1-benzofuran analogues (Choi et al., 2011a,b), we report herein the crystal structure of the title compound.

In the title molecule (Fig. 1), the benzofuran unit is essentially planar, with a mean deviation of 0.004 (1) Å from the least-squares plane defined by the nine constituent atoms. The cyclohexyl ring is in the chair form. The molecular packing (Fig. 2) is stabilized by weak intermolecular C—H···O hydrogen bonds between a methyl H atom and the O atom of the sulfonyl group (Table 1; C10—H10B···O2ii). The crystal packing (Fig. 2) is further stabilized by a Br···O halogen-bonding between the bromine and the O atom of the sulfonyl group [Br1···O2i = 3.211 (1) Å, C4—Br1···O2i = 168.13 (6)°] (Politzer et al., 2007).

Experimental

77% 3-chloroperoxybenzoic acid (448 mg, 2.0 mmol) was added in small portions to a stirred solution of 5-bromo-3-cyclohexylsulfanyl-2,7-dimethyl-1-benzofuran (305 mg, 0.9 mmol) in dichloromethane (40 mL) at 273 K. After being stirred at room temperature for 5h, the mixture was washed with saturated sodium bicarbonate solution and the organic layer was separated, dried over magnesium sulfate, filtered and concentrated at reduced pressure. The residue was purified by column chromatography (hexane-ethyl acetate, 4:1 v/v) to afford the title compound as a colorless solid [yield 72%, m.p. 440–441 K; Rf = 0.55 (hexane–ethyl acetate, 4:1 v/v)]. Single crystals suitable for X-ray diffraction were prepared by slow evaporation of a solution of the title compound in acetone at room temperature.

Refinement

All H atoms were positioned geometrically and refined using a riding model, with C—H = 0.95 Å for aryl, 1.00 Å for methine, 0.99 Å for methylene and 0.98 Å for methyl H atoms, respectively. Uiso(H) = 1.2Ueq(C) for aryl, methine and methylene, and 1.5Ueq(C) for methyl H atoms.

Figures

Fig. 1.

Fig. 1.

The molecular structure of the title compound. Displacement ellipsoids are drawn at the 50% probability level.H atoms are presented as a small spheres of arbitrary radius.

Fig. 2.

Fig. 2.

A view of the Br···O and C—H···O interactions (dotted lines) in the crystal structure of the title compound. [Symmetry codes: (i) - x, - y + 1, - z + 1; (ii) x + 1, y, z; (iii) x - 1, y, z.]

Crystal data

C16H19BrO3S Z = 2
Mr = 371.28 F(000) = 380
Triclinic, P1 Dx = 1.599 Mg m3
Hall symbol: -P 1 Mo Kα radiation, λ = 0.71073 Å
a = 6.6992 (2) Å Cell parameters from 7893 reflections
b = 8.4654 (2) Å θ = 2.5–27.5°
c = 14.1065 (3) Å µ = 2.81 mm1
α = 101.773 (1)° T = 173 K
β = 99.283 (1)° Block, colourless
γ = 92.067 (1)° 0.26 × 0.25 × 0.21 mm
V = 770.94 (3) Å3

Data collection

Bruker SMART APEXII CCD diffractometer 3542 independent reflections
Radiation source: rotating anode 3247 reflections with I > 2σ(I)
graphite multilayer Rint = 0.032
Detector resolution: 10.0 pixels mm-1 θmax = 27.5°, θmin = 1.5°
φ and ω scans h = −8→8
Absorption correction: multi-scan (SADABS; Bruker, 2009) k = −10→11
Tmin = 0.525, Tmax = 0.591 l = −18→18
13840 measured reflections

Refinement

Refinement on F2 Primary atom site location: structure-invariant direct methods
Least-squares matrix: full Secondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.025 Hydrogen site location: difference Fourier map
wR(F2) = 0.066 H-atom parameters constrained
S = 1.10 w = 1/[σ2(Fo2) + (0.0331P)2 + 0.2732P] where P = (Fo2 + 2Fc2)/3
3542 reflections (Δ/σ)max = 0.001
192 parameters Δρmax = 0.27 e Å3
0 restraints Δρmin = −0.59 e Å3

Special details

Geometry. All esds (except the esd in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell esds are taken into account individually in the estimation of esds in distances, angles and torsion angles; correlations between esds in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell esds is used for estimating esds involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > 2sigma(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.

Fractional atomic coordinates and isotropic or equivalent isotropic displacement parameters (Å2)

x y z Uiso*/Ueq
Br1 0.23387 (3) 0.56750 (2) 0.639762 (13) 0.02642 (7)
S1 0.18306 (6) 0.68046 (5) 0.21799 (3) 0.02179 (10)
O1 0.68271 (17) 0.88970 (14) 0.39103 (9) 0.0209 (2)
O2 0.00575 (19) 0.67623 (17) 0.26350 (10) 0.0308 (3)
O3 0.1772 (2) 0.76300 (17) 0.13792 (10) 0.0319 (3)
C1 0.3856 (3) 0.7638 (2) 0.31083 (12) 0.0199 (3)
C2 0.4083 (2) 0.7416 (2) 0.41070 (12) 0.0186 (3)
C3 0.2943 (2) 0.6642 (2) 0.46471 (12) 0.0205 (3)
H3 0.1661 0.6086 0.4362 0.025*
C4 0.3779 (3) 0.6731 (2) 0.56194 (13) 0.0205 (3)
C5 0.5655 (3) 0.7538 (2) 0.60597 (12) 0.0207 (3)
H5 0.6147 0.7562 0.6733 0.025*
C6 0.6817 (2) 0.8306 (2) 0.55345 (12) 0.0193 (3)
C7 0.5946 (2) 0.8214 (2) 0.45637 (12) 0.0187 (3)
C8 0.5527 (3) 0.8528 (2) 0.30300 (12) 0.0210 (3)
C9 0.8873 (3) 0.9137 (2) 0.59697 (14) 0.0259 (4)
H9A 0.9904 0.8546 0.5652 0.039*
H9B 0.9150 0.9161 0.6676 0.039*
H9C 0.8910 1.0246 0.5865 0.039*
C10 0.6222 (3) 0.9166 (2) 0.22308 (13) 0.0278 (4)
H10A 0.5172 0.8903 0.1641 0.042*
H10B 0.7471 0.8677 0.2085 0.042*
H10C 0.6483 1.0343 0.2435 0.042*
C11 0.2440 (3) 0.4760 (2) 0.17876 (12) 0.0212 (3)
H11 0.2926 0.4334 0.2389 0.025*
C12 0.0529 (3) 0.3725 (2) 0.12283 (14) 0.0305 (4)
H12A −0.0521 0.3788 0.1652 0.037*
H12B −0.0016 0.4137 0.0637 0.037*
C13 0.1038 (3) 0.1970 (3) 0.09238 (17) 0.0399 (5)
H13A 0.1455 0.1532 0.1519 0.048*
H13B −0.0187 0.1316 0.0534 0.048*
C14 0.2727 (3) 0.1828 (3) 0.03208 (16) 0.0386 (5)
H14A 0.2253 0.2152 −0.0309 0.046*
H14B 0.3069 0.0686 0.0169 0.046*
C15 0.4616 (3) 0.2888 (2) 0.08642 (15) 0.0321 (4)
H15A 0.5648 0.2825 0.0431 0.039*
H15B 0.5189 0.2477 0.1452 0.039*
C16 0.4139 (3) 0.4651 (2) 0.11810 (14) 0.0277 (4)
H16A 0.5368 0.5293 0.1576 0.033*
H16B 0.3723 0.5107 0.0592 0.033*

Atomic displacement parameters (Å2)

U11 U22 U33 U12 U13 U23
Br1 0.02483 (10) 0.02977 (12) 0.02630 (10) −0.00189 (7) 0.00582 (7) 0.00932 (8)
S1 0.0202 (2) 0.0225 (2) 0.0199 (2) 0.00190 (16) −0.00183 (15) 0.00234 (17)
O1 0.0188 (6) 0.0227 (6) 0.0203 (6) −0.0014 (5) 0.0035 (5) 0.0031 (5)
O2 0.0196 (6) 0.0361 (8) 0.0324 (7) 0.0021 (5) 0.0016 (5) −0.0002 (6)
O3 0.0372 (8) 0.0301 (7) 0.0265 (7) 0.0024 (6) −0.0058 (6) 0.0103 (6)
C1 0.0199 (8) 0.0190 (8) 0.0187 (8) 0.0020 (6) 0.0012 (6) 0.0007 (6)
C2 0.0190 (8) 0.0149 (8) 0.0196 (8) 0.0025 (6) 0.0017 (6) −0.0005 (6)
C3 0.0177 (8) 0.0186 (8) 0.0228 (8) −0.0010 (6) 0.0024 (6) 0.0004 (7)
C4 0.0205 (8) 0.0177 (8) 0.0235 (8) 0.0008 (6) 0.0056 (6) 0.0038 (7)
C5 0.0216 (8) 0.0196 (8) 0.0193 (8) 0.0035 (6) 0.0008 (6) 0.0019 (7)
C6 0.0169 (7) 0.0169 (8) 0.0216 (8) 0.0016 (6) 0.0012 (6) −0.0003 (6)
C7 0.0187 (8) 0.0164 (8) 0.0209 (8) 0.0016 (6) 0.0051 (6) 0.0024 (6)
C8 0.0231 (8) 0.0189 (8) 0.0191 (8) 0.0044 (6) 0.0020 (6) 0.0003 (7)
C9 0.0190 (8) 0.0286 (10) 0.0270 (9) −0.0014 (7) −0.0007 (7) 0.0027 (8)
C10 0.0284 (9) 0.0320 (10) 0.0245 (9) 0.0009 (8) 0.0060 (7) 0.0085 (8)
C11 0.0235 (8) 0.0198 (8) 0.0176 (8) −0.0012 (7) 0.0003 (6) 0.0010 (7)
C12 0.0256 (9) 0.0335 (11) 0.0267 (9) −0.0072 (8) 0.0036 (7) −0.0043 (8)
C13 0.0410 (12) 0.0302 (11) 0.0400 (12) −0.0125 (9) 0.0069 (9) −0.0095 (9)
C14 0.0407 (12) 0.0329 (11) 0.0334 (11) 0.0007 (9) 0.0038 (9) −0.0107 (9)
C15 0.0304 (10) 0.0286 (10) 0.0339 (10) 0.0035 (8) 0.0047 (8) −0.0008 (8)
C16 0.0258 (9) 0.0266 (10) 0.0300 (9) 0.0005 (7) 0.0068 (7) 0.0032 (8)

Geometric parameters (Å, °)

Br1—C4 1.9011 (17) C9—H9C 0.9800
Br1—O2i 3.2114 (14) C10—H10A 0.9800
S1—O3 1.4406 (13) C10—H10B 0.9800
S1—O2 1.4410 (14) C10—H10C 0.9800
S1—C1 1.7420 (17) C11—C16 1.525 (3)
S1—C11 1.7891 (18) C11—C12 1.530 (2)
O1—C8 1.368 (2) C11—H11 1.0000
O1—C7 1.379 (2) C12—C13 1.526 (3)
C1—C8 1.359 (2) C12—H12A 0.9900
C1—C2 1.444 (2) C12—H12B 0.9900
C2—C7 1.390 (2) C13—C14 1.515 (3)
C2—C3 1.396 (2) C13—H13A 0.9900
C3—C4 1.381 (2) C13—H13B 0.9900
C3—H3 0.9500 C14—C15 1.523 (3)
C4—C5 1.395 (2) C14—H14A 0.9900
C5—C6 1.387 (2) C14—H14B 0.9900
C5—H5 0.9500 C15—C16 1.529 (3)
C6—C7 1.385 (2) C15—H15A 0.9900
C6—C9 1.500 (2) C15—H15B 0.9900
C8—C10 1.476 (2) C16—H16A 0.9900
C9—H9A 0.9800 C16—H16B 0.9900
C9—H9B 0.9800
C4—Br1—O2i 168.13 (6) H10A—C10—H10B 109.5
O3—S1—O2 118.36 (9) C8—C10—H10C 109.5
O3—S1—C1 109.59 (8) H10A—C10—H10C 109.5
O2—S1—C1 107.06 (8) H10B—C10—H10C 109.5
O3—S1—C11 109.54 (8) C16—C11—C12 111.87 (15)
O2—S1—C11 107.55 (8) C16—C11—S1 111.84 (12)
C1—S1—C11 103.73 (8) C12—C11—S1 109.74 (13)
C8—O1—C7 107.00 (13) C16—C11—H11 107.7
C8—C1—C2 107.69 (15) C12—C11—H11 107.7
C8—C1—S1 127.55 (14) S1—C11—H11 107.7
C2—C1—S1 124.69 (13) C13—C12—C11 109.64 (16)
C7—C2—C3 119.34 (15) C13—C12—H12A 109.7
C7—C2—C1 104.60 (15) C11—C12—H12A 109.7
C3—C2—C1 136.06 (15) C13—C12—H12B 109.7
C4—C3—C2 116.33 (15) C11—C12—H12B 109.7
C4—C3—H3 121.8 H12A—C12—H12B 108.2
C2—C3—H3 121.8 C14—C13—C12 111.54 (18)
C3—C4—C5 123.20 (16) C14—C13—H13A 109.3
C3—C4—Br1 118.84 (12) C12—C13—H13A 109.3
C5—C4—Br1 117.95 (13) C14—C13—H13B 109.3
C6—C5—C4 121.37 (15) C12—C13—H13B 109.3
C6—C5—H5 119.3 H13A—C13—H13B 108.0
C4—C5—H5 119.3 C13—C14—C15 111.59 (17)
C7—C6—C5 114.55 (15) C13—C14—H14A 109.3
C7—C6—C9 122.37 (16) C15—C14—H14A 109.3
C5—C6—C9 123.07 (16) C13—C14—H14B 109.3
O1—C7—C6 124.35 (15) C15—C14—H14B 109.3
O1—C7—C2 110.43 (14) H14A—C14—H14B 108.0
C6—C7—C2 125.21 (15) C14—C15—C16 111.47 (17)
C1—C8—O1 110.27 (15) C14—C15—H15A 109.3
C1—C8—C10 134.88 (16) C16—C15—H15A 109.3
O1—C8—C10 114.85 (15) C14—C15—H15B 109.3
C6—C9—H9A 109.5 C16—C15—H15B 109.3
C6—C9—H9B 109.5 H15A—C15—H15B 108.0
H9A—C9—H9B 109.5 C11—C16—C15 110.14 (16)
C6—C9—H9C 109.5 C11—C16—H16A 109.6
H9A—C9—H9C 109.5 C15—C16—H16A 109.6
H9B—C9—H9C 109.5 C11—C16—H16B 109.6
C8—C10—H10A 109.5 C15—C16—H16B 109.6
C8—C10—H10B 109.5 H16A—C16—H16B 108.1
O3—S1—C1—C8 −20.06 (19) C9—C6—C7—C2 177.58 (17)
O2—S1—C1—C8 −149.60 (16) C3—C2—C7—O1 −179.90 (14)
C11—S1—C1—C8 96.84 (17) C1—C2—C7—O1 0.31 (18)
O3—S1—C1—C2 163.32 (14) C3—C2—C7—C6 0.7 (3)
O2—S1—C1—C2 33.78 (17) C1—C2—C7—C6 −179.11 (16)
C11—S1—C1—C2 −79.78 (16) C2—C1—C8—O1 0.13 (19)
C8—C1—C2—C7 −0.26 (19) S1—C1—C8—O1 −176.95 (12)
S1—C1—C2—C7 176.92 (13) C2—C1—C8—C10 −179.71 (19)
C8—C1—C2—C3 179.99 (19) S1—C1—C8—C10 3.2 (3)
S1—C1—C2—C3 −2.8 (3) C7—O1—C8—C1 0.06 (18)
C7—C2—C3—C4 −0.2 (2) C7—O1—C8—C10 179.94 (15)
C1—C2—C3—C4 179.56 (18) O3—S1—C11—C16 43.02 (15)
C2—C3—C4—C5 0.0 (3) O2—S1—C11—C16 172.87 (12)
C2—C3—C4—Br1 −178.90 (12) C1—S1—C11—C16 −73.92 (14)
O2i—Br1—C4—C3 56.5 (3) O3—S1—C11—C12 −81.75 (14)
O2i—Br1—C4—C5 −122.5 (3) O2—S1—C11—C12 48.11 (14)
C3—C4—C5—C6 −0.4 (3) C1—S1—C11—C12 161.32 (13)
Br1—C4—C5—C6 178.57 (13) C16—C11—C12—C13 57.1 (2)
C4—C5—C6—C7 0.8 (2) S1—C11—C12—C13 −178.14 (14)
C4—C5—C6—C9 −177.76 (17) C11—C12—C13—C14 −56.2 (2)
C8—O1—C7—C6 179.18 (16) C12—C13—C14—C15 55.8 (2)
C8—O1—C7—C2 −0.24 (18) C13—C14—C15—C16 −55.0 (3)
C5—C6—C7—O1 179.69 (15) C12—C11—C16—C15 −56.6 (2)
C9—C6—C7—O1 −1.8 (3) S1—C11—C16—C15 179.81 (12)
C5—C6—C7—C2 −1.0 (3) C14—C15—C16—C11 54.9 (2)

Symmetry codes: (i) −x, −y+1, −z+1.

Hydrogen-bond geometry (Å, °)

D—H···A D—H H···A D···A D—H···A
C10—H10B···O2ii 0.98 2.55 3.384 (2) 143

Symmetry codes: (ii) x+1, y, z.

Footnotes

Supplementary data and figures for this paper are available from the IUCr electronic archives (Reference: LR2008).

References

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Associated Data

This section collects any data citations, data availability statements, or supplementary materials included in this article.

Supplementary Materials

Crystal structure: contains datablocks global, I. DOI: 10.1107/S160053681101539X/lr2008sup1.cif

e-67-o1279-sup1.cif (19.4KB, cif)

Structure factors: contains datablocks I. DOI: 10.1107/S160053681101539X/lr2008Isup2.hkl

e-67-o1279-Isup2.hkl (173.7KB, hkl)

Supplementary material file. DOI: 10.1107/S160053681101539X/lr2008Isup3.cml

Additional supplementary materials: crystallographic information; 3D view; checkCIF report


Articles from Acta Crystallographica Section E: Structure Reports Online are provided here courtesy of International Union of Crystallography

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