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Acta Crystallographica Section E: Structure Reports Online logoLink to Acta Crystallographica Section E: Structure Reports Online
. 2011 Apr 16;67(Pt 5):o1140. doi: 10.1107/S1600536811013316

(Z)-N-{3-[(6-Chloro­pyridin-3-yl)meth­yl]-1,3-thia­zolidin-2-yl­idene}cyanamide

Jin-Sheng Gao a,b,*, Jun Qiao a, Ying-Hui Yu a, Guang-Feng Hou b
PMCID: PMC3089287  PMID: 21754449

Abstract

The asymmetric unit of the title compound, C10H9ClN4S, common name thia­cloprid, comprises two mol­ecules. In both mol­ecules, the thia­zolidine rings are almost planar (with r.m.s. deviations of 0.016 and 0.065 Å) and form dihedral angles of 73.36 (6) and 70.25 (8)° with the 2-chloro­pyridine rings. In the crystal, inter­molecular C—H⋯N hydrogen bonds links the mol­ecules into chains propagating in [Inline graphic01].

Related literature

For background to the title compound, a member of the neonicotinoide class of insecticides, see Maienfisch et al. (2003). For the synthesis, see Ishimitsu et al., (1991)graphic file with name e-67-o1140-scheme1.jpg

Experimental

Crystal data

  • C10H9ClN4S

  • M r = 252.73

  • Monoclinic, Inline graphic

  • a = 7.1294 (14) Å

  • b = 35.469 (7) Å

  • c = 9.0211 (18) Å

  • β = 97.80 (3)°

  • V = 2260.1 (8) Å3

  • Z = 8

  • Mo Kα radiation

  • μ = 0.50 mm−1

  • T = 293 K

  • 0.31 × 0.29 × 0.20 mm

Data collection

  • Rigaku R-AXIS RAPID diffractometer

  • Absorption correction: multi-scan (ABSCOR; Higashi, 1995) T min = 0.863, T max = 0.909

  • 21869 measured reflections

  • 5151 independent reflections

  • 3505 reflections with I > 2σ(I)

  • R int = 0.046

Refinement

  • R[F 2 > 2σ(F 2)] = 0.048

  • wR(F 2) = 0.137

  • S = 1.08

  • 5151 reflections

  • 289 parameters

  • H-atom parameters constrained

  • Δρmax = 0.21 e Å−3

  • Δρmin = −0.29 e Å−3

Data collection: RAPID-AUTO (Rigaku, 1998); cell refinement: RAPID-AUTO; data reduction: CrystalClear (Rigaku/MSC, 2002); program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: SHELXTL (Sheldrick, 2008); software used to prepare material for publication: SHELXL97.

Supplementary Material

Crystal structure: contains datablocks I, global. DOI: 10.1107/S1600536811013316/kp2319sup1.cif

e-67-o1140-sup1.cif (19.3KB, cif)

Structure factors: contains datablocks I. DOI: 10.1107/S1600536811013316/kp2319Isup2.hkl

e-67-o1140-Isup2.hkl (252.3KB, hkl)

Additional supplementary materials: crystallographic information; 3D view; checkCIF report

Table 1. Hydrogen-bond geometry (Å, °).

D—H⋯A D—H H⋯A DA D—H⋯A
C3—H3⋯N5i 0.93 2.55 3.459 (4) 167
C13—H13⋯N1ii 0.93 2.49 3.408 (4) 169

Symmetry codes: (i) Inline graphic; (ii) Inline graphic.

Acknowledgments

The authors thank the Special Funds for the Research of Scientific and Technological Innovative Talents of Harbin Municipal Science and Technology Bureau (2009RFXXG027), the Science and Technology Planning Project of Heilongjiang Province (GZ08A401) and Heilongjiang University for supporting this study.

supplementary crystallographic information

Comment

Thiacloprid is the common name of the title compound, which is neonicotinoide class of insecticide. High efficacy and flexible application methods make it well suited for modern integrated pest management programs in many cropping systems (Ishimitsu et al., 1991; Maienfisch et al., 2003). We report here the synthesis and crystal structure of thiacloprid.

The asymmetric unit comprises two molecules; the thiazolidine rings are almost planar, and form the dihedral angles with 2-chloropyridine rings of 73.36 (6) and 70.25 (8)°, respectively (Fig. 1).

In the crystal, the intermolecular C—H···N hydrogen bonds link the molecules to form a chain (Fig. 2, Table 1).

Experimental

The title compound was synthesised according the reference (Ishimitsu et al., 1991). A mixture of 2-cyanoiminothiazolidine (12.7 g, 0.1 mol), 2-chloro-5-pyridylmethyl-chloride (17.4 g, 0.1 mol), and K2CO3 (41.4 g, 0.3 mol) in 150 mL of DMF was heated to 323 K and kept stirring for 7 h. After filtered under reduced pressure, the DMF solution was distilled off. A total of 20.2 g (80.2%) title compound was obtained after the recrystallisation from ethyl acetate (15 mL). The suitable colourless block crystal was picked out for the single crystal X-ray diffaction measurement.

Refinement

H atoms bound to C atoms were placed in calculated positions and treated as riding on their parent atoms, with C—H = 0.93 Å (aromatic); C—H = 0.97 Å (methylene), and with Uiso(H) = 1.2Ueq(C).

Figures

Fig. 1.

Fig. 1.

The molecular structure of the title compound showing displacement ellipsoids at the 50% probability level for non-H atoms.

Fig. 2.

Fig. 2.

A partial packing view, showing the hydrogen bonding chain. Dashed lines indicate the hydrogen bonds, no involving H atoms have been omitted for clarity.

Crystal data

C10H9ClN4S F(000) = 1040
Mr = 252.73 Dx = 1.486 Mg m3
Monoclinic, P21/c Mo Kα radiation, λ = 0.71073 Å
Hall symbol: -P 2ybc Cell parameters from 12991 reflections
a = 7.1294 (14) Å θ = 3.1–27.5°
b = 35.469 (7) Å µ = 0.50 mm1
c = 9.0211 (18) Å T = 293 K
β = 97.80 (3)° Block, colourless
V = 2260.1 (8) Å3 0.31 × 0.29 × 0.20 mm
Z = 8

Data collection

Rigaku R-AXIS RAPID diffractometer 5151 independent reflections
Radiation source: fine-focus sealed tube 3505 reflections with I > 2σ(I)
graphite Rint = 0.046
ω scans θmax = 27.5°, θmin = 3.1°
Absorption correction: multi-scan (ABSCOR; Higashi, 1995) h = −8→9
Tmin = 0.863, Tmax = 0.909 k = −45→45
21869 measured reflections l = −11→11

Refinement

Refinement on F2 Primary atom site location: structure-invariant direct methods
Least-squares matrix: full Secondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.048 Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.137 H-atom parameters constrained
S = 1.08 w = 1/[σ2(Fo2) + (0.0595P)2 + 0.4995P] where P = (Fo2 + 2Fc2)/3
5151 reflections (Δ/σ)max < 0.001
289 parameters Δρmax = 0.21 e Å3
0 restraints Δρmin = −0.29 e Å3

Special details

Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.

Fractional atomic coordinates and isotropic or equivalent isotropic displacement parameters (Å2)

x y z Uiso*/Ueq
C1 0.8652 (3) 0.04805 (6) 0.2994 (3) 0.0528 (6)
C2 0.7778 (4) 0.05431 (7) 0.4241 (3) 0.0564 (6)
H2 0.8315 0.0461 0.5183 0.068*
C3 0.6087 (4) 0.07309 (7) 0.4038 (3) 0.0541 (6)
H3 0.5443 0.0777 0.4850 0.065*
C4 0.5334 (3) 0.08520 (5) 0.2624 (3) 0.0417 (5)
C5 0.6313 (4) 0.07628 (6) 0.1459 (3) 0.0525 (6)
H5 0.5795 0.0835 0.0500 0.063*
C6 0.3545 (3) 0.10860 (6) 0.2362 (3) 0.0486 (5)
H6A 0.2856 0.1025 0.1390 0.058*
H6B 0.2744 0.1024 0.3115 0.058*
C7 0.4452 (4) 0.16785 (7) 0.3852 (3) 0.0586 (6)
H7A 0.5677 0.1592 0.4331 0.070*
H7B 0.3516 0.1622 0.4507 0.070*
C8 0.4506 (6) 0.20899 (8) 0.3572 (4) 0.0831 (10)
H8A 0.5573 0.2202 0.4200 0.100*
H8B 0.3354 0.2207 0.3811 0.100*
C9 0.4189 (3) 0.16902 (6) 0.1222 (3) 0.0422 (5)
C10 0.4177 (3) 0.17589 (7) −0.1287 (3) 0.0545 (6)
C11 1.3337 (3) 0.05498 (7) 0.7709 (3) 0.0558 (6)
C12 1.2138 (4) 0.04665 (8) 0.8736 (3) 0.0618 (6)
H12 1.2387 0.0268 0.9406 0.074*
C13 1.0549 (4) 0.06898 (8) 0.8737 (3) 0.0609 (7)
H13 0.9712 0.0646 0.9423 0.073*
C14 1.0214 (3) 0.09783 (7) 0.7712 (3) 0.0523 (6)
C15 1.1509 (4) 0.10300 (8) 0.6735 (3) 0.0665 (7)
H15 1.1280 0.1222 0.6033 0.080*
C16 0.8483 (3) 0.12283 (9) 0.7672 (4) 0.0678 (8)
H16A 0.7818 0.1234 0.6660 0.081*
H16B 0.7636 0.1121 0.8315 0.081*
C17 0.8939 (5) 0.19245 (10) 0.7102 (4) 0.0840 (10)
H17A 0.7664 0.1963 0.6595 0.101*
H17B 0.9753 0.1866 0.6353 0.101*
C18 0.9605 (6) 0.22673 (9) 0.7904 (4) 0.0853 (10)
H18A 0.8799 0.2478 0.7556 0.102*
H18B 1.0887 0.2325 0.7728 0.102*
C19 0.9155 (3) 0.17075 (7) 0.9595 (3) 0.0464 (5)
C20 0.9267 (3) 0.15741 (8) 1.2059 (3) 0.0593 (6)
Cl1 1.08715 (10) 0.02601 (2) 0.31970 (11) 0.0811 (3)
Cl2 1.53924 (11) 0.02813 (2) 0.76846 (10) 0.0809 (2)
N1 0.7967 (3) 0.05776 (6) 0.1620 (3) 0.0592 (5)
N2 0.3963 (2) 0.14899 (5) 0.2425 (2) 0.0432 (4)
N3 0.4000 (3) 0.15412 (5) −0.0121 (2) 0.0504 (5)
N4 0.4288 (4) 0.19221 (7) −0.2375 (3) 0.0777 (7)
N5 1.3080 (3) 0.08234 (7) 0.6720 (3) 0.0658 (6)
N6 0.8957 (3) 0.16118 (6) 0.8155 (2) 0.0540 (5)
N7 0.9051 (3) 0.14604 (6) 1.0652 (2) 0.0551 (5)
N8 0.9439 (4) 0.16423 (9) 1.3319 (3) 0.0864 (8)
S1 0.47264 (10) 0.216369 (16) 0.16494 (8) 0.05802 (19)
S2 0.95422 (12) 0.21907 (2) 0.98475 (9) 0.0698 (2)

Atomic displacement parameters (Å2)

U11 U22 U33 U12 U13 U23
C1 0.0496 (12) 0.0361 (10) 0.0750 (18) 0.0031 (10) 0.0159 (12) 0.0066 (11)
C2 0.0653 (14) 0.0536 (13) 0.0499 (15) 0.0087 (12) 0.0069 (12) 0.0066 (11)
C3 0.0656 (14) 0.0505 (12) 0.0483 (14) 0.0063 (11) 0.0159 (11) 0.0021 (11)
C4 0.0476 (11) 0.0336 (9) 0.0458 (13) −0.0015 (9) 0.0138 (9) 0.0020 (8)
C5 0.0664 (14) 0.0486 (12) 0.0450 (14) 0.0081 (11) 0.0160 (11) 0.0053 (10)
C6 0.0465 (11) 0.0424 (11) 0.0580 (15) −0.0045 (9) 0.0113 (10) 0.0002 (10)
C7 0.0753 (16) 0.0539 (13) 0.0462 (14) −0.0019 (12) 0.0061 (12) −0.0049 (11)
C8 0.133 (3) 0.0574 (16) 0.060 (2) 0.0008 (18) 0.0185 (19) −0.0117 (14)
C9 0.0367 (10) 0.0416 (10) 0.0476 (13) 0.0033 (8) 0.0029 (9) 0.0007 (9)
C10 0.0555 (13) 0.0566 (13) 0.0501 (15) 0.0046 (11) 0.0032 (11) 0.0001 (12)
C11 0.0568 (13) 0.0556 (13) 0.0579 (16) −0.0027 (11) 0.0177 (12) −0.0152 (12)
C12 0.0708 (16) 0.0605 (15) 0.0575 (17) −0.0074 (13) 0.0214 (13) −0.0025 (12)
C13 0.0601 (14) 0.0736 (16) 0.0541 (16) −0.0178 (13) 0.0257 (12) −0.0177 (13)
C14 0.0495 (12) 0.0619 (14) 0.0465 (14) −0.0090 (11) 0.0106 (10) −0.0205 (11)
C15 0.0728 (17) 0.0727 (17) 0.0591 (18) 0.0088 (14) 0.0279 (14) 0.0006 (13)
C16 0.0482 (13) 0.0861 (19) 0.0685 (19) −0.0033 (13) 0.0062 (12) −0.0297 (15)
C17 0.096 (2) 0.112 (3) 0.0459 (17) 0.009 (2) 0.0141 (15) 0.0145 (17)
C18 0.106 (2) 0.0733 (19) 0.080 (2) 0.0222 (18) 0.0239 (19) 0.0220 (17)
C19 0.0389 (10) 0.0567 (13) 0.0438 (13) 0.0051 (10) 0.0068 (9) −0.0056 (10)
C20 0.0484 (12) 0.0786 (17) 0.0525 (16) 0.0114 (12) 0.0125 (11) 0.0098 (13)
Cl1 0.0568 (4) 0.0582 (4) 0.1311 (8) 0.0141 (3) 0.0232 (4) 0.0113 (4)
Cl2 0.0785 (5) 0.0756 (5) 0.0938 (6) 0.0180 (4) 0.0307 (4) −0.0044 (4)
N1 0.0684 (13) 0.0531 (11) 0.0623 (15) 0.0100 (10) 0.0310 (11) 0.0084 (10)
N2 0.0454 (9) 0.0407 (9) 0.0437 (11) 0.0020 (8) 0.0068 (8) −0.0008 (8)
N3 0.0559 (11) 0.0496 (10) 0.0450 (12) 0.0029 (9) 0.0045 (9) −0.0002 (9)
N4 0.0968 (18) 0.0831 (17) 0.0537 (15) 0.0063 (14) 0.0119 (13) 0.0126 (13)
N5 0.0701 (14) 0.0680 (13) 0.0662 (15) 0.0064 (11) 0.0349 (12) −0.0018 (11)
N6 0.0504 (10) 0.0702 (13) 0.0413 (11) 0.0095 (10) 0.0058 (8) −0.0082 (9)
N7 0.0581 (11) 0.0601 (12) 0.0485 (13) 0.0040 (10) 0.0129 (9) 0.0025 (9)
N8 0.0813 (17) 0.133 (2) 0.0470 (15) 0.0174 (16) 0.0147 (12) 0.0044 (15)
S1 0.0681 (4) 0.0420 (3) 0.0615 (4) −0.0052 (3) −0.0003 (3) 0.0019 (3)
S2 0.0892 (5) 0.0566 (4) 0.0649 (5) 0.0004 (3) 0.0145 (4) −0.0053 (3)

Geometric parameters (Å, °)

C1—N1 1.314 (3) C11—N5 1.314 (4)
C1—C2 1.376 (4) C11—C12 1.375 (4)
C1—Cl1 1.752 (2) C11—Cl2 1.750 (3)
C2—C3 1.368 (3) C12—C13 1.383 (4)
C2—H2 0.9300 C12—H12 0.9300
C3—C4 1.383 (3) C13—C14 1.378 (4)
C3—H3 0.9300 C13—H13 0.9300
C4—C5 1.375 (3) C14—C15 1.373 (4)
C4—C6 1.513 (3) C14—C16 1.516 (4)
C5—N1 1.340 (3) C15—N5 1.340 (4)
C5—H5 0.9300 C15—H15 0.9300
C6—N2 1.463 (3) C16—N6 1.454 (3)
C6—H6A 0.9700 C16—H16A 0.9700
C6—H6B 0.9700 C16—H16B 0.9700
C7—N2 1.451 (3) C17—N6 1.459 (4)
C7—C8 1.482 (4) C17—C18 1.461 (5)
C7—H7A 0.9700 C17—H17A 0.9700
C7—H7B 0.9700 C17—H17B 0.9700
C8—S1 1.782 (3) C18—S2 1.781 (4)
C8—H8A 0.9700 C18—H18A 0.9700
C8—H8B 0.9700 C18—H18B 0.9700
C9—N3 1.312 (3) C19—N7 1.305 (3)
C9—N2 1.325 (3) C19—N6 1.331 (3)
C9—S1 1.754 (2) C19—S2 1.746 (2)
C10—N4 1.152 (3) C20—N8 1.152 (4)
C10—N3 1.324 (3) C20—N7 1.321 (3)
N1—C1—C2 125.2 (2) C14—C13—C12 119.5 (2)
N1—C1—Cl1 115.5 (2) C14—C13—H13 120.2
C2—C1—Cl1 119.3 (2) C12—C13—H13 120.2
C3—C2—C1 117.2 (2) C15—C14—C13 117.3 (2)
C3—C2—H2 121.4 C15—C14—C16 121.5 (3)
C1—C2—H2 121.4 C13—C14—C16 121.1 (3)
C2—C3—C4 120.0 (2) N5—C15—C14 124.7 (3)
C2—C3—H3 120.0 N5—C15—H15 117.6
C4—C3—H3 120.0 C14—C15—H15 117.6
C5—C4—C3 117.4 (2) N6—C16—C14 112.62 (19)
C5—C4—C6 120.7 (2) N6—C16—H16A 109.1
C3—C4—C6 121.9 (2) C14—C16—H16A 109.1
N1—C5—C4 124.1 (2) N6—C16—H16B 109.1
N1—C5—H5 118.0 C14—C16—H16B 109.1
C4—C5—H5 118.0 H16A—C16—H16B 107.8
N2—C6—C4 111.60 (17) N6—C17—C18 109.7 (3)
N2—C6—H6A 109.3 N6—C17—H17A 109.7
C4—C6—H6A 109.3 C18—C17—H17A 109.7
N2—C6—H6B 109.3 N6—C17—H17B 109.7
C4—C6—H6B 109.3 C18—C17—H17B 109.7
H6A—C6—H6B 108.0 H17A—C17—H17B 108.2
N2—C7—C8 108.2 (2) C17—C18—S2 108.1 (2)
N2—C7—H7A 110.1 C17—C18—H18A 110.1
C8—C7—H7A 110.1 S2—C18—H18A 110.1
N2—C7—H7B 110.1 C17—C18—H18B 110.1
C8—C7—H7B 110.1 S2—C18—H18B 110.1
H7A—C7—H7B 108.4 H18A—C18—H18B 108.4
C7—C8—S1 108.5 (2) N7—C19—N6 122.2 (2)
C7—C8—H8A 110.0 N7—C19—S2 125.99 (19)
S1—C8—H8A 110.0 N6—C19—S2 111.81 (18)
C7—C8—H8B 110.0 N8—C20—N7 174.3 (3)
S1—C8—H8B 110.0 C1—N1—C5 116.1 (2)
H8A—C8—H8B 108.4 C9—N2—C7 116.01 (19)
N3—C9—N2 122.1 (2) C9—N2—C6 122.68 (19)
N3—C9—S1 125.52 (18) C7—N2—C6 120.61 (19)
N2—C9—S1 112.34 (17) C9—N3—C10 119.3 (2)
N4—C10—N3 174.2 (3) C11—N5—C15 115.9 (2)
N5—C11—C12 125.0 (2) C19—N6—C16 121.3 (2)
N5—C11—Cl2 115.7 (2) C19—N6—C17 115.6 (2)
C12—C11—Cl2 119.3 (2) C16—N6—C17 122.3 (2)
C11—C12—C13 117.5 (3) C19—N7—C20 119.1 (2)
C11—C12—H12 121.3 C9—S1—C8 91.61 (12)
C13—C12—H12 121.3 C19—S2—C18 92.62 (14)

Hydrogen-bond geometry (Å, °)

D—H···A D—H H···A D···A D—H···A
C3—H3···N5i 0.93 2.55 3.459 (4) 167
C13—H13···N1ii 0.93 2.49 3.408 (4) 169

Symmetry codes: (i) x−1, y, z; (ii) x, y, z+1.

Footnotes

Supplementary data and figures for this paper are available from the IUCr electronic archives (Reference: KP2319).

References

  1. Higashi, T. (1995). ABSCOR Rigaku Corporation, Tokyo, Japan.
  2. Ishimitsu, K., Suzuki, J., Ohishi, H., Yamada, T., Hatano, R., Takakusa, N. & Mitsui, J. (1991). WO Patent 91/04965.
  3. Maienfisch, P., Haettenschwiler, J., Rindlisbacher, A., Decock, A., Wellmann, H. & Kayser, H. (2003). Chimia, 57, 710–714.
  4. Rigaku (1998). RAPID-AUTO Rigaku Corporation, Tokyo, Japan.
  5. Rigaku/MSC (2002). CrystalClear Rigaku/MSC Inc., The Woodlands, Texas, USA.
  6. Sheldrick, G. M. (2008). Acta Cryst. A64, 112–122. [DOI] [PubMed]

Associated Data

This section collects any data citations, data availability statements, or supplementary materials included in this article.

Supplementary Materials

Crystal structure: contains datablocks I, global. DOI: 10.1107/S1600536811013316/kp2319sup1.cif

e-67-o1140-sup1.cif (19.3KB, cif)

Structure factors: contains datablocks I. DOI: 10.1107/S1600536811013316/kp2319Isup2.hkl

e-67-o1140-Isup2.hkl (252.3KB, hkl)

Additional supplementary materials: crystallographic information; 3D view; checkCIF report


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