Abstract
In the title compound, [ZnI2(C13H19N3O)], the ZnII ion is five-coordinated in a distorted square-pyramidal geometry, in which the basal plane is defined by three N atoms from the Schiff base ligand and one iodide ion. A second iodide ligand, situated in the apical position, completes the coordination geometry. In the crystal structure, C—H⋯O hydrogen bonds link a pair of molecules around an inversion centre into a dimer.
Related literature
For the structure of an analogous ZnCl2 complex, see: Ikmal Hisham et al. (2011 ▶). For square-pyramidal ZnI2 complexes with N,N′,N′′-tridentate ligands, see: Drew & Hollis (1978 ▶); Yousefi (2010 ▶). For a description of the geometry of complexes with five-coordinated metal ions, see: Addison et al. (1984 ▶).
Experimental
Crystal data
[ZnI2(C13H19N3O)]
M r = 552.48
Triclinic,
a = 8.8874 (3) Å
b = 10.3117 (4) Å
c = 10.3643 (4) Å
α = 68.8810 (18)°
β = 81.959 (2)°
γ = 66.3990 (17)°
V = 811.91 (6) Å3
Z = 2
Mo Kα radiation
μ = 5.31 mm−1
T = 100 K
0.17 × 0.13 × 0.09 mm
Data collection
Bruker APEXII CCD diffractometer
Absorption correction: multi-scan (SADABS; Sheldrick, 1996 ▶) T min = 0.465, T max = 0.646
7292 measured reflections
3517 independent reflections
3260 reflections with I > 2σ(I)
R int = 0.013
Refinement
R[F 2 > 2σ(F 2)] = 0.018
wR(F 2) = 0.045
S = 1.05
3517 reflections
182 parameters
H-atom parameters constrained
Δρmax = 0.85 e Å−3
Δρmin = −1.23 e Å−3
Data collection: APEX2 (Bruker, 2007 ▶); cell refinement: SAINT (Bruker, 2007 ▶); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: X-SEED (Barbour, 2001 ▶); software used to prepare material for publication: SHELXL97 and publCIF (Westrip, 2010 ▶).
Supplementary Material
Crystal structure: contains datablocks I, global. DOI: 10.1107/S1600536811014656/hy2422sup1.cif
Structure factors: contains datablocks I. DOI: 10.1107/S1600536811014656/hy2422Isup2.hkl
Additional supplementary materials: crystallographic information; 3D view; checkCIF report
Table 1. Selected bond lengths (Å).
| Zn1—N1 | 2.205 (2) |
| Zn1—N2 | 2.093 (2) |
| Zn1—N3 | 2.269 (2) |
| Zn1—I1 | 2.6018 (4) |
| Zn1—I2 | 2.6506 (4) |
Table 2. Hydrogen-bond geometry (Å, °).
| D—H⋯A | D—H | H⋯A | D⋯A | D—H⋯A |
|---|---|---|---|---|
| C13—H13A⋯O1i | 0.99 | 2.55 | 3.491 (3) | 159 |
Symmetry code: (i)
.
Acknowledgments
The authors thank the University of Malaya for funding this study (FRGS grant No. FP004/2010B).
supplementary crystallographic information
Comment
The title compound (Fig. 1) was obtained via the complexation of ZnII ion with the in situ prepared Schiff base, 2-morpholino-N-[1-(2-pyridyl)ethylidene]ethanamine, and two iodide ions. Similar to what was observed in an analogous ZnCl2 complex (Ikmal Hisham et al., 2011), the Schiff base acts as an N,N',N''-tridentate chelate ligand, along with two halide ligands, make a distorted square-pyramidal geometry around the metal ion (τ = 0.24, Addison et al., 1984). The Zn—I and Zn—N interatomic distances (Table 1) are comparable to the values reported for similar structures (Drew & Hollis, 1978; Yousefi, 2010). In the crystal, a pair of the molecules, related by a symmetry operation -x + 1, -y + 2, -z + 2, are linked through C—H···O hydrogen bonds into a centrosymmetric dimer (Table 2).
Experimental
A mixture of 2-acetylpyridine (0.20 g, 1.65 mmol) and 4-(2-aminoethyl)morpholine (0.21 g, 1.65 mmol) in ethanol (20 ml) was refluxed for 2 h, followed by addition of a solution of zinc(II) acetate dihydrate (0.36 g, 1.65 mmol) and potassium iodide (0.54 g, 3.3 mmol) in a minimum amount of water. The resulting solution was refluxed for 30 min and then left at room temperature. Brown crystals of the title complex were obtained in a few days.
Refinement
H atoms were placed at calculated positions and refined as riding atoms, with C—H = 0.95 (aryl), 0.98 (methyl) and 0.99 (methylene) Å and with Uiso(H) = 1.2(1.5 for methyl)Ueq(C).
Figures
Fig. 1.
Molecular structure of the title compound. Displacement ellipsoids are drawn at the 50% probability level.
Crystal data
| [ZnI2(C13H19N3O)] | Z = 2 |
| Mr = 552.48 | F(000) = 524 |
| Triclinic, P1 | Dx = 2.260 Mg m−3 |
| Hall symbol: -P 1 | Mo Kα radiation, λ = 0.71073 Å |
| a = 8.8874 (3) Å | Cell parameters from 6030 reflections |
| b = 10.3117 (4) Å | θ = 2.3–30.4° |
| c = 10.3643 (4) Å | µ = 5.31 mm−1 |
| α = 68.8810 (18)° | T = 100 K |
| β = 81.959 (2)° | Block, brown |
| γ = 66.3990 (17)° | 0.17 × 0.13 × 0.09 mm |
| V = 811.91 (6) Å3 |
Data collection
| Bruker APEXII CCD diffractometer | 3517 independent reflections |
| Radiation source: fine-focus sealed tube | 3260 reflections with I > 2σ(I) |
| graphite | Rint = 0.013 |
| φ and ω scans | θmax = 27.0°, θmin = 2.1° |
| Absorption correction: multi-scan (SADABS; Sheldrick, 1996) | h = −11→11 |
| Tmin = 0.465, Tmax = 0.646 | k = −13→13 |
| 7292 measured reflections | l = −13→13 |
Refinement
| Refinement on F2 | Primary atom site location: structure-invariant direct methods |
| Least-squares matrix: full | Secondary atom site location: difference Fourier map |
| R[F2 > 2σ(F2)] = 0.018 | Hydrogen site location: inferred from neighbouring sites |
| wR(F2) = 0.045 | H-atom parameters constrained |
| S = 1.05 | w = 1/[σ2(Fo2) + (0.0197P)2 + 1.3278P] where P = (Fo2 + 2Fc2)/3 |
| 3517 reflections | (Δ/σ)max = 0.002 |
| 182 parameters | Δρmax = 0.85 e Å−3 |
| 0 restraints | Δρmin = −1.23 e Å−3 |
Fractional atomic coordinates and isotropic or equivalent isotropic displacement parameters (Å2)
| x | y | z | Uiso*/Ueq | ||
| Zn1 | 0.77476 (4) | 0.81170 (3) | 0.66161 (3) | 0.01267 (7) | |
| I1 | 0.64389 (2) | 1.103488 (18) | 0.584395 (17) | 0.01508 (5) | |
| I2 | 1.05998 (2) | 0.694938 (19) | 0.791314 (17) | 0.01566 (5) | |
| O1 | 0.3717 (2) | 0.8562 (2) | 1.0506 (2) | 0.0212 (4) | |
| N1 | 0.8699 (3) | 0.8016 (2) | 0.4558 (2) | 0.0135 (4) | |
| N2 | 0.7235 (3) | 0.6403 (2) | 0.6380 (2) | 0.0137 (4) | |
| N3 | 0.6122 (3) | 0.7619 (2) | 0.8469 (2) | 0.0137 (4) | |
| C1 | 0.9527 (3) | 0.8810 (3) | 0.3702 (3) | 0.0161 (5) | |
| H1 | 0.9697 | 0.9537 | 0.3959 | 0.019* | |
| C2 | 1.0153 (3) | 0.8615 (3) | 0.2446 (3) | 0.0181 (5) | |
| H2 | 1.0767 | 0.9176 | 0.1868 | 0.022* | |
| C3 | 0.9859 (3) | 0.7587 (3) | 0.2062 (3) | 0.0190 (6) | |
| H3 | 1.0239 | 0.7455 | 0.1197 | 0.023* | |
| C4 | 0.9002 (3) | 0.6744 (3) | 0.2951 (3) | 0.0165 (5) | |
| H4 | 0.8797 | 0.6024 | 0.2709 | 0.020* | |
| C5 | 0.8456 (3) | 0.6981 (3) | 0.4199 (3) | 0.0145 (5) | |
| C6 | 0.7574 (3) | 0.6108 (3) | 0.5253 (3) | 0.0139 (5) | |
| C7 | 0.7137 (3) | 0.5006 (3) | 0.4920 (3) | 0.0181 (5) | |
| H7A | 0.6732 | 0.4412 | 0.5754 | 0.027* | |
| H7B | 0.8112 | 0.4336 | 0.4582 | 0.027* | |
| H7C | 0.6280 | 0.5547 | 0.4204 | 0.027* | |
| C8 | 0.6366 (3) | 0.5663 (3) | 0.7513 (3) | 0.0161 (5) | |
| H8A | 0.6837 | 0.4566 | 0.7693 | 0.019* | |
| H8B | 0.5189 | 0.6052 | 0.7275 | 0.019* | |
| C9 | 0.6557 (3) | 0.5993 (3) | 0.8785 (3) | 0.0150 (5) | |
| H9A | 0.5839 | 0.5643 | 0.9531 | 0.018* | |
| H9B | 0.7707 | 0.5435 | 0.9119 | 0.018* | |
| C10 | 0.4339 (3) | 0.8512 (3) | 0.8159 (3) | 0.0157 (5) | |
| H10A | 0.4008 | 0.8254 | 0.7440 | 0.019* | |
| H10B | 0.4152 | 0.9594 | 0.7782 | 0.019* | |
| C11 | 0.3273 (3) | 0.8231 (3) | 0.9429 (3) | 0.0177 (5) | |
| H11A | 0.2107 | 0.8864 | 0.9174 | 0.021* | |
| H11B | 0.3391 | 0.7166 | 0.9766 | 0.021* | |
| C12 | 0.5400 (3) | 0.7684 (3) | 1.0885 (3) | 0.0188 (6) | |
| H12A | 0.5561 | 0.6608 | 1.1276 | 0.023* | |
| H12B | 0.5690 | 0.7960 | 1.1610 | 0.023* | |
| C13 | 0.6531 (3) | 0.7918 (3) | 0.9652 (3) | 0.0168 (5) | |
| H13A | 0.6466 | 0.8967 | 0.9338 | 0.020* | |
| H13B | 0.7676 | 0.7247 | 0.9950 | 0.020* |
Atomic displacement parameters (Å2)
| U11 | U22 | U33 | U12 | U13 | U23 | |
| Zn1 | 0.01377 (14) | 0.01207 (14) | 0.01168 (14) | −0.00432 (11) | 0.00086 (11) | −0.00440 (11) |
| I1 | 0.01607 (9) | 0.01218 (8) | 0.01448 (9) | −0.00349 (6) | 0.00078 (6) | −0.00401 (6) |
| I2 | 0.01406 (9) | 0.01676 (9) | 0.01511 (9) | −0.00421 (7) | −0.00121 (6) | −0.00553 (7) |
| O1 | 0.0184 (10) | 0.0264 (11) | 0.0200 (10) | −0.0062 (8) | 0.0039 (8) | −0.0130 (9) |
| N1 | 0.0131 (10) | 0.0134 (10) | 0.0120 (10) | −0.0034 (8) | 0.0003 (8) | −0.0039 (8) |
| N2 | 0.0130 (10) | 0.0110 (10) | 0.0147 (11) | −0.0028 (8) | −0.0011 (8) | −0.0033 (8) |
| N3 | 0.0150 (11) | 0.0130 (10) | 0.0116 (10) | −0.0047 (9) | 0.0001 (8) | −0.0032 (8) |
| C1 | 0.0148 (12) | 0.0163 (12) | 0.0164 (13) | −0.0051 (10) | −0.0007 (10) | −0.0051 (10) |
| C2 | 0.0142 (12) | 0.0194 (13) | 0.0178 (13) | −0.0053 (11) | 0.0010 (10) | −0.0047 (11) |
| C3 | 0.0171 (13) | 0.0214 (14) | 0.0138 (13) | −0.0024 (11) | 0.0017 (10) | −0.0067 (11) |
| C4 | 0.0153 (13) | 0.0178 (13) | 0.0160 (13) | −0.0034 (10) | −0.0007 (10) | −0.0084 (11) |
| C5 | 0.0108 (12) | 0.0140 (12) | 0.0160 (13) | −0.0014 (10) | −0.0011 (9) | −0.0053 (10) |
| C6 | 0.0116 (12) | 0.0123 (12) | 0.0159 (13) | −0.0012 (10) | −0.0012 (9) | −0.0057 (10) |
| C7 | 0.0187 (13) | 0.0189 (13) | 0.0185 (14) | −0.0070 (11) | 0.0010 (10) | −0.0085 (11) |
| C8 | 0.0176 (13) | 0.0155 (12) | 0.0165 (13) | −0.0077 (10) | 0.0038 (10) | −0.0064 (10) |
| C9 | 0.0167 (13) | 0.0123 (12) | 0.0135 (13) | −0.0048 (10) | 0.0009 (10) | −0.0028 (10) |
| C10 | 0.0145 (12) | 0.0169 (12) | 0.0148 (13) | −0.0042 (10) | 0.0003 (10) | −0.0061 (10) |
| C11 | 0.0151 (13) | 0.0192 (13) | 0.0186 (14) | −0.0055 (11) | 0.0020 (10) | −0.0079 (11) |
| C12 | 0.0183 (13) | 0.0256 (14) | 0.0123 (13) | −0.0071 (11) | 0.0008 (10) | −0.0076 (11) |
| C13 | 0.0181 (13) | 0.0197 (13) | 0.0124 (13) | −0.0064 (11) | 0.0018 (10) | −0.0067 (10) |
Geometric parameters (Å, °)
| Zn1—N1 | 2.205 (2) | C4—H4 | 0.9500 |
| Zn1—N2 | 2.093 (2) | C5—C6 | 1.495 (4) |
| Zn1—N3 | 2.269 (2) | C6—C7 | 1.495 (4) |
| Zn1—I1 | 2.6018 (4) | C7—H7A | 0.9800 |
| Zn1—I2 | 2.6506 (4) | C7—H7B | 0.9800 |
| O1—C11 | 1.423 (3) | C7—H7C | 0.9800 |
| O1—C12 | 1.426 (3) | C8—C9 | 1.521 (4) |
| N1—C1 | 1.332 (3) | C8—H8A | 0.9900 |
| N1—C5 | 1.349 (3) | C8—H8B | 0.9900 |
| N2—C6 | 1.277 (3) | C9—H9A | 0.9900 |
| N2—C8 | 1.459 (3) | C9—H9B | 0.9900 |
| N3—C9 | 1.479 (3) | C10—C11 | 1.521 (4) |
| N3—C13 | 1.490 (3) | C10—H10A | 0.9900 |
| N3—C10 | 1.491 (3) | C10—H10B | 0.9900 |
| C1—C2 | 1.394 (4) | C11—H11A | 0.9900 |
| C1—H1 | 0.9500 | C11—H11B | 0.9900 |
| C2—C3 | 1.380 (4) | C12—C13 | 1.521 (4) |
| C2—H2 | 0.9500 | C12—H12A | 0.9900 |
| C3—C4 | 1.394 (4) | C12—H12B | 0.9900 |
| C3—H3 | 0.9500 | C13—H13A | 0.9900 |
| C4—C5 | 1.387 (4) | C13—H13B | 0.9900 |
| N2—Zn1—N1 | 74.71 (8) | C6—C7—H7B | 109.5 |
| N2—Zn1—N3 | 78.31 (8) | H7A—C7—H7B | 109.5 |
| N1—Zn1—N3 | 151.54 (8) | C6—C7—H7C | 109.5 |
| N2—Zn1—I1 | 137.01 (6) | H7A—C7—H7C | 109.5 |
| N1—Zn1—I1 | 95.53 (6) | H7B—C7—H7C | 109.5 |
| N3—Zn1—I1 | 98.03 (6) | N2—C8—C9 | 107.5 (2) |
| N2—Zn1—I2 | 109.52 (6) | N2—C8—H8A | 110.2 |
| N1—Zn1—I2 | 98.21 (6) | C9—C8—H8A | 110.2 |
| N3—Zn1—I2 | 99.18 (6) | N2—C8—H8B | 110.2 |
| I1—Zn1—I2 | 113.325 (12) | C9—C8—H8B | 110.2 |
| C11—O1—C12 | 110.8 (2) | H8A—C8—H8B | 108.5 |
| C1—N1—C5 | 118.9 (2) | N3—C9—C8 | 111.1 (2) |
| C1—N1—Zn1 | 126.70 (18) | N3—C9—H9A | 109.4 |
| C5—N1—Zn1 | 114.34 (17) | C8—C9—H9A | 109.4 |
| C6—N2—C8 | 122.6 (2) | N3—C9—H9B | 109.4 |
| C6—N2—Zn1 | 120.65 (18) | C8—C9—H9B | 109.4 |
| C8—N2—Zn1 | 116.61 (16) | H9A—C9—H9B | 108.0 |
| C9—N3—C13 | 111.1 (2) | N3—C10—C11 | 112.5 (2) |
| C9—N3—C10 | 112.5 (2) | N3—C10—H10A | 109.1 |
| C13—N3—C10 | 107.4 (2) | C11—C10—H10A | 109.1 |
| C9—N3—Zn1 | 100.98 (15) | N3—C10—H10B | 109.1 |
| C13—N3—Zn1 | 111.80 (16) | C11—C10—H10B | 109.1 |
| C10—N3—Zn1 | 113.10 (15) | H10A—C10—H10B | 107.8 |
| N1—C1—C2 | 122.6 (3) | O1—C11—C10 | 111.4 (2) |
| N1—C1—H1 | 118.7 | O1—C11—H11A | 109.3 |
| C2—C1—H1 | 118.7 | C10—C11—H11A | 109.3 |
| C3—C2—C1 | 118.3 (3) | O1—C11—H11B | 109.3 |
| C3—C2—H2 | 120.8 | C10—C11—H11B | 109.3 |
| C1—C2—H2 | 120.8 | H11A—C11—H11B | 108.0 |
| C2—C3—C4 | 119.6 (3) | O1—C12—C13 | 111.7 (2) |
| C2—C3—H3 | 120.2 | O1—C12—H12A | 109.3 |
| C4—C3—H3 | 120.2 | C13—C12—H12A | 109.3 |
| C5—C4—C3 | 118.4 (3) | O1—C12—H12B | 109.3 |
| C5—C4—H4 | 120.8 | C13—C12—H12B | 109.3 |
| C3—C4—H4 | 120.8 | H12A—C12—H12B | 107.9 |
| N1—C5—C4 | 122.1 (2) | N3—C13—C12 | 113.3 (2) |
| N1—C5—C6 | 114.8 (2) | N3—C13—H13A | 108.9 |
| C4—C5—C6 | 123.1 (2) | C12—C13—H13A | 108.9 |
| N2—C6—C5 | 115.4 (2) | N3—C13—H13B | 108.9 |
| N2—C6—C7 | 125.4 (2) | C12—C13—H13B | 108.9 |
| C5—C6—C7 | 119.2 (2) | H13A—C13—H13B | 107.7 |
| C6—C7—H7A | 109.5 |
Hydrogen-bond geometry (Å, °)
| D—H···A | D—H | H···A | D···A | D—H···A |
| C13—H13A···O1i | 0.99 | 2.55 | 3.491 (3) | 159 |
Symmetry codes: (i) −x+1, −y+2, −z+2.
Footnotes
Supplementary data and figures for this paper are available from the IUCr electronic archives (Reference: HY2422).
References
- Addison, A. W., Rao, T. N., Reedijk, J., Rijn, V. J. & Verschoor, G. C. (1984). J. Chem. Soc. Dalton Trans. pp. 1349–1356.
- Barbour, L. J. (2001). J. Supramol. Chem. 1, 189–191.
- Bruker (2007). APEX2 and SAINT Bruker AXS Inc., Madison, Wisconsin, USA.
- Drew, M. G. B. & Hollis, S. (1978). J. Chem. Soc. Dalton Trans. pp. 511–516.
- Ikmal Hisham, N. A., Suleiman Gwaram, N., Khaledi, H. & Mohd Ali, H. (2011). Acta Cryst. E67, m55. [DOI] [PMC free article] [PubMed]
- Sheldrick, G. M. (1996). SADABS University of Göttingen, Germany.
- Sheldrick, G. M. (2008). Acta Cryst. A64, 112–122. [DOI] [PubMed]
- Westrip, S. P. (2010). J. Appl. Cryst. 43, 920–925.
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Associated Data
This section collects any data citations, data availability statements, or supplementary materials included in this article.
Supplementary Materials
Crystal structure: contains datablocks I, global. DOI: 10.1107/S1600536811014656/hy2422sup1.cif
Structure factors: contains datablocks I. DOI: 10.1107/S1600536811014656/hy2422Isup2.hkl
Additional supplementary materials: crystallographic information; 3D view; checkCIF report

