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. 1993 Jul 1;21(13):3021–3023. doi: 10.1093/nar/21.13.3021

The ribosomal database project.

N Larsen 1, G J Olsen 1, B L Maidak 1, M J McCaughey 1, R Overbeek 1, T J Macke 1, T L Marsh 1, C R Woese 1
PMCID: PMC309730  PMID: 8332524

Abstract

The Ribosomal Database Project (RDP) is a curated database that offers ribosome data along with related programs and services. The offerings include phylogenetically ordered alignments of ribosomal RNA (rRNA) sequences, derived phylogenetic trees, rRNA secondary structure diagrams and various software packages for handling, analyzing and displaying alignments and trees. The data are available via ftp and electronic mail. Certain analytic services are also provided by the electronic mail server.

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Selected References

These references are in PubMed. This may not be the complete list of references from this article.

  1. Burks C., Cinkosky M. J., Fischer W. M., Gilna P., Hayden J. E., Keen G. M., Kelly M., Kristofferson D., Lawrence J. GenBank. Nucleic Acids Res. 1992 May 11;20 (Suppl):2065–2069. doi: 10.1093/nar/20.suppl.2065. [DOI] [PMC free article] [PubMed] [Google Scholar]
  2. De Rijk P., Neefs J. M., Van de Peer Y., De Wachter R. Compilation of small ribosomal subunit RNA sequences. Nucleic Acids Res. 1992 May 11;20 (Suppl):2075–2089. doi: 10.1093/nar/20.suppl.2075. [DOI] [PMC free article] [PubMed] [Google Scholar]
  3. Felsenstein J. Evolutionary trees from DNA sequences: a maximum likelihood approach. J Mol Evol. 1981;17(6):368–376. doi: 10.1007/BF01734359. [DOI] [PubMed] [Google Scholar]
  4. Higgins D. G., Fuchs R., Stoehr P. J., Cameron G. N. The EMBL Data Library. Nucleic Acids Res. 1992 May 11;20 (Suppl):2071–2074. doi: 10.1093/nar/20.suppl.2071. [DOI] [PMC free article] [PubMed] [Google Scholar]
  5. Maddison W. P., Maddison D. R. Interactive analysis of phylogeny and character evolution using the computer program MacClade. Folia Primatol (Basel) 1989;53(1-4):190–202. doi: 10.1159/000156416. [DOI] [PubMed] [Google Scholar]

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