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. 1993 Jul 1;21(13):3125–3137. doi: 10.1093/nar/21.13.3125

REBASE--restriction enzymes and methylases.

R J Roberts 1, D Macelis 1
PMCID: PMC309742  PMID: 8392714

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Selected References

These references are in PubMed. This may not be the complete list of references from this article.

  1. Degtyarev S. Kh, Abdurashitov M. A., Kolyhalov A. A., Rechkunova N. I. AclI, a new restriction endonuclease from Acinetobacter calcoaceticus recognizing 5'-A decreases CGTT-3'. Nucleic Acids Res. 1992 Jul 25;20(14):3787–3787. doi: 10.1093/nar/20.14.3787. [DOI] [PMC free article] [PubMed] [Google Scholar]
  2. Degtyarev S. Kh, Kolyhalov A. A., Rechkunova N. I., Abdurashitov M. A. AcsI, a new restriction endonuclease from Arthrobacter citreus 310 recognizing 5'-Pu decreases AATTPy-3'. Nucleic Acids Res. 1992 Jul 25;20(14):3789–3789. doi: 10.1093/nar/20.14.3789. [DOI] [PMC free article] [PubMed] [Google Scholar]
  3. Denjmuchametov M. M., Ruban N. M., Zakharova M. V., Beletzkaja I. V., Kravetz A. N., Solonin A. S. Eco27kI, a new isoschizomer of AvaI from Escherichia coli. Nucleic Acids Res. 1992 Apr 25;20(8):1992–1992. doi: 10.1093/nar/20.8.1992. [DOI] [PMC free article] [PubMed] [Google Scholar]
  4. Denjmuchametov M. M., Ruban N. M., Zakharova M. V., Beletzkaja I. V., Kravetz A. N., Solonin A. S. Eco27kI, a new isoschizomer of AvaI from Escherichia coli. Nucleic Acids Res. 1992 Apr 25;20(8):1992–1992. doi: 10.1093/nar/20.8.1992. [DOI] [PMC free article] [PubMed] [Google Scholar]
  5. Frey B., Kaluza K., Auer J., Stratidakis I., Rina M., Bouriotis V., Schmitz G. AspEI, a novel Eam11051 isoschizomer from Aureobacterium species recognizing 5'-GACnnn/nnGTC-3'. Nucleic Acids Res. 1992 Jul 25;20(14):3782–3782. doi: 10.1093/nar/20.14.3782. [DOI] [PMC free article] [PubMed] [Google Scholar]
  6. Geck P., Molnár A., Nász I. Identification of ATGCAT sequence at sites of SmuC I restriction endonuclease by computer and physical mapping of adenovirus type 1 DNA. Acta Microbiol Hung. 1991;38(1):47–53. [PubMed] [Google Scholar]
  7. Geier G. E., Modrich P. Recognition sequence of the dam methylase of Escherichia coli K12 and mode of cleavage of Dpn I endonuclease. J Biol Chem. 1979 Feb 25;254(4):1408–1413. [PubMed] [Google Scholar]
  8. Hattman S., Brooks J. E., Masurekar M. Sequence specificity of the P1 modification methylase (M.Eco P1) and the DNA methylase (M.Eco dam) controlled by the Escherichia coli dam gene. J Mol Biol. 1978 Dec 15;126(3):367–380. doi: 10.1016/0022-2836(78)90046-3. [DOI] [PubMed] [Google Scholar]
  9. Knoblich I. M., Sellmann E., Kaluza K., Frey B., Auer J., Schmitz G. G., Westermann P. Ssp5230I, a novel isoschizomer of AatII from Streptomyces recognizing 5'-GACGT/C-3'. Nucleic Acids Res. 1992 May 11;20(9):2378–2378. doi: 10.1093/nar/20.9.2378. [DOI] [PMC free article] [PubMed] [Google Scholar]
  10. Kovalevskaia N. P., Zheleznaia L. A., Matvienko N. I. BspLS2I--novaia sait-spetsificheskaia éndonukleaza iz termofil'noi bakterii Bacillus species LS2. Bioorg Khim. 1992 Dec;18(12):1473–1477. [PubMed] [Google Scholar]
  11. Kravetz A. N., Zakharova M. V., Beljetzkaja I. V., Pertzev A. V., Spivak O. I., Solonin A. S. Two novel restriction endonucleases from Klebsiella pneumoniae. Nucleic Acids Res. 1993 Mar 25;21(6):1501–1501. doi: 10.1093/nar/21.6.1501. [DOI] [PMC free article] [PubMed] [Google Scholar]
  12. Kravetz A. N., Zakharova M. V., Beljetzkaja I. V., Pertzev A. V., Spivak O. I., Solonin A. S. Two novel restriction endonucleases from Klebsiella pneumoniae. Nucleic Acids Res. 1993 Mar 25;21(6):1501–1501. doi: 10.1093/nar/21.6.1501. [DOI] [PMC free article] [PubMed] [Google Scholar]
  13. Labbé D., Höltke H. J., Lau P. C. Cloning and characterization of two tandemly arranged DNA methyltransferase genes of Neisseria lactamica: an adenine-specific M.NlaIII and a cytosine-type methylase. Mol Gen Genet. 1990 Oct;224(1):101–110. doi: 10.1007/BF00259456. [DOI] [PubMed] [Google Scholar]
  14. Lacks S., Greenberg B. Complementary specificity of restriction endonucleases of Diplococcus pneumoniae with respect to DNA methylation. J Mol Biol. 1977 Jul;114(1):153–168. doi: 10.1016/0022-2836(77)90289-3. [DOI] [PubMed] [Google Scholar]
  15. Lange C., Noyer-Weidner M., Trautner T. A., Weiner M., Zahler S. A. M.H2I, a multispecific 5C-DNA methyltransferase encoded by Bacillus amyloliquefaciens phage H2. Gene. 1991 Apr;100:213–218. doi: 10.1016/0378-1119(91)90369-m. [DOI] [PubMed] [Google Scholar]
  16. Lee K. F., Shi S. D., Kam K. M., Shaw P. C. Restriction endonuclease from thermophilic bacterial species III. Isolation and characterization of BsiHKA I. Nucleic Acids Res. 1992 Feb 25;20(4):921–921. doi: 10.1093/nar/20.4.921. [DOI] [PMC free article] [PubMed] [Google Scholar]
  17. Lobos C., Vásquez C. Purification and characterisation of Bst LVI restriction endonuclease, a thermostable isoschizomer of ClaI from Bacillus stearothermophilus LV. Biochim Biophys Acta. 1993 Jan 23;1171(3):295–298. doi: 10.1016/0167-4781(93)90068-o. [DOI] [PubMed] [Google Scholar]
  18. Marinus M. G., Morris N. R. Isolation of deoxyribonucleic acid methylase mutants of Escherichia coli K-12. J Bacteriol. 1973 Jun;114(3):1143–1150. doi: 10.1128/jb.114.3.1143-1150.1973. [DOI] [PMC free article] [PubMed] [Google Scholar]
  19. Matvienko N. N., Kramarov V. M., Ivanov LYu, Matvienko N. I. Bce83I, a restriction endonuclease from Bacillus cereus 83 which recognizes novel nonpalindromic sequence 5'-CTTGAG-3' and is stimulated by S-adenosylmethionine. Nucleic Acids Res. 1992 Apr 11;20(7):1803–1803. doi: 10.1093/nar/20.7.1803. [DOI] [PMC free article] [PubMed] [Google Scholar]
  20. Matvienko N. N., Zeleznaja L. A., Matvienko N. I. BspLU11l, a novel site specific endonuclease which cleaves 5'-ACATGT-3'. Nucleic Acids Res. 1993 Mar 25;21(6):1495–1495. doi: 10.1093/nar/21.6.1495. [DOI] [PMC free article] [PubMed] [Google Scholar]
  21. Mermelstein L. D., Welker N. E., Bennett G. N., Papoutsakis E. T. Expression of cloned homologous fermentative genes in Clostridium acetobutylicum ATCC 824. Biotechnology (N Y) 1992 Feb;10(2):190–195. doi: 10.1038/nbt0292-190. [DOI] [PubMed] [Google Scholar]
  22. Molnár A., Geck P., Orosz A., Kulcsár P., Nász I. Purification of a new restriction endonuclease from Streptococcus mutans and identification of its recognition sequence. Acta Microbiol Hung. 1991;38(1):55–60. [PubMed] [Google Scholar]
  23. Moriya S., Yanagawa S., Aoki N., Iwabuchi M., Inoue T., Ando T. Isolation and characterization of a restriction enzyme BspO4I from an alkalophilic bacterium. Nucleic Acids Res. 1992 Jul 25;20(14):3781–3781. doi: 10.1093/nar/20.14.3781. [DOI] [PMC free article] [PubMed] [Google Scholar]
  24. Morrison M., Mackie R. I., White B. A. Partial purification and characterization of Ral8I, a class-IIS restriction endonuclease from Ruminococcus albus 8 which recognizes 5'-GGATC. Gene. 1992 Feb 1;111(1):105–108. doi: 10.1016/0378-1119(92)90609-s. [DOI] [PubMed] [Google Scholar]
  25. Nölling J., de Vos W. M. Characterization of the archaeal, plasmid-encoded type II restriction-modification system MthTI from Methanobacterium thermoformicicum THF: homology to the bacterial NgoPII system from Neisseria gonorrhoeae. J Bacteriol. 1992 Sep;174(17):5719–5726. doi: 10.1128/jb.174.17.5719-5726.1992. [DOI] [PMC free article] [PubMed] [Google Scholar]
  26. Nölling J., de Vos W. M. Identification of the CTAG-recognizing restriction-modification systems MthZI and MthFI from Methanobacterium thermoformicicum and characterization of the plasmid-encoded mthZIM gene. Nucleic Acids Res. 1992 Oct 11;20(19):5047–5052. doi: 10.1093/nar/20.19.5047. [DOI] [PMC free article] [PubMed] [Google Scholar]
  27. Pertzev A. V., Ruban N. M., Zakharova M. V., Beletzkaja I. V., Petrov S. I., Kravetz A. N., Solonin A. S. Eco29kI, a novel plasmid encoded restriction endonuclease from Escherichia coli. Nucleic Acids Res. 1992 Apr 25;20(8):1991–1991. doi: 10.1093/nar/20.8.1991. [DOI] [PMC free article] [PubMed] [Google Scholar]
  28. Piechula S., Kur J., Bielawski K., Podhajska A. J. Isolation and identification of the restriction endonuclease PtaI from Phormidium tadzschicicum, an isoschizomer of BspMII. Nucleic Acids Res. 1992 Dec 25;20(24):6738–6738. doi: 10.1093/nar/20.24.6738. [DOI] [PMC free article] [PubMed] [Google Scholar]
  29. Piechula S., Kur J., Bielawski K., Podhajska A. J. Isolation and identification of the restriction endonuclease PtaI from Phormidium tadzschicicum, an isoschizomer of BspMII. Nucleic Acids Res. 1992 Dec 25;20(24):6738–6738. doi: 10.1093/nar/20.24.6738. [DOI] [PMC free article] [PubMed] [Google Scholar]
  30. Pogge von Strandmann R., Städtler P., Walter T., Frey B., Kaluza K., Hengstenberg W., Schmitz G. BpuAI, a novel BbsI and BbvII isoschizomer from Bacillus pumilus recognizing 5'-GAAGAC-3'. Nucleic Acids Res. 1992 Sep 11;20(17):4664–4664. doi: 10.1093/nar/20.17.4664. [DOI] [PMC free article] [PubMed] [Google Scholar]
  31. Pristas P., Godány A., Sevcíková B., Oktavcová B., Farkasovská J. Characterization of restriction endonuclease activities in tetracycline producing strains of Streptomyces aureofaciens. Nucleic Acids Res. 1992 Aug 25;20(16):4364–4364. doi: 10.1093/nar/20.16.4364. [DOI] [PMC free article] [PubMed] [Google Scholar]
  32. Rina M., Dialektakis D., Clark D., Pagomenou M., Bouriotis V. Isolation and identification of restriction endonuclease BseCI. Nucleic Acids Res. 1992 Apr 11;20(7):1807–1807. doi: 10.1093/nar/20.7.1807. [DOI] [PMC free article] [PubMed] [Google Scholar]
  33. Rina M., Tzanodaskalaki M., Karagouni A., Pagomenou M., Bouriotis V. Isolation and identification of restriction endonuclease MspCI. Nucleic Acids Res. 1992 Apr 11;20(7):1806–1806. doi: 10.1093/nar/20.7.1806. [DOI] [PMC free article] [PubMed] [Google Scholar]
  34. Rina M., Tzanodaskalaki M., Karagouni A., Pagomenou M., Bouriotis V. Isolation and identification of restriction endonuclease SseBI. Nucleic Acids Res. 1992 Apr 11;20(7):1808–1808. doi: 10.1093/nar/20.7.1808. [DOI] [PMC free article] [PubMed] [Google Scholar]
  35. Shankar S., Tyagi A. K. MhaAI, a novel isoschizomer of PstI from Mycobacterium habana recognizing 5'-CTGCA/G-3'. Nucleic Acids Res. 1992 Jun 11;20(11):2891–2891. doi: 10.1093/nar/20.11.2891. [DOI] [PMC free article] [PubMed] [Google Scholar]
  36. Shapovalova N. I., Ivanov L. Iu, Matvienko N. I. Sait-spetsificheskaia éndonukleaza BSTM6I iz Bacillus stearothermophilus M6. Bioorg Khim. 1992 Sep;18(9):1186–1189. [PubMed] [Google Scholar]
  37. Zhang Y., Nelson M., Nietfeldt J. W., Burbank D. E., Van Etten J. L. Characterization of Chlorella virus PBCV-1 CviAII restriction and modification system. Nucleic Acids Res. 1992 Oct 25;20(20):5351–5356. doi: 10.1093/nar/20.20.5351. [DOI] [PMC free article] [PubMed] [Google Scholar]
  38. Zhang Y., Nelson M., Van Etten J. L. A single amino acid change restores DNA cytosine methyltransferase activity in a cloned chlorella virus pseudogene. Nucleic Acids Res. 1992 Apr 11;20(7):1637–1642. doi: 10.1093/nar/20.7.1637. [DOI] [PMC free article] [PubMed] [Google Scholar]
  39. Zhao Z. H., Yung M. H., Cui T., Wang Y. Z., Shaw P. C. Restriction endonuclease from thermophilic bacterial species. IV. Isolation and characterization of BpuB5I. Nucleic Acids Res. 1992 Mar 11;20(5):1156–1156. doi: 10.1093/nar/20.5.1156. [DOI] [PMC free article] [PubMed] [Google Scholar]

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