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Acta Crystallographica Section E: Structure Reports Online logoLink to Acta Crystallographica Section E: Structure Reports Online
. 2011 Mar 26;67(Pt 4):m493. doi: 10.1107/S1600536811010579

Bis(2,4-dichloro­phen­oxy­acetato-κ2 O 1,O 1′)(5,5′-dimethyl-2,2′-bipyridine-κ2 N,N′)cobalt(II)

Li-Li Ji a, Jian-She Liu a,*, Wen-Dong Song b
PMCID: PMC3099758  PMID: 21754003

Abstract

In the title compound, [Co(C8H5Cl2O3)(C12H12N2)], the CoII atom, lying on a twofold rotation axis, is coordinated by four O atoms from two chelating 2,4-dichloro­phen­oxy­acetate ligands and two N atoms from a 5,5′-dimethyl-2,2′-bipyridine ligand, displaying a distorted octa­hedral geometry. A three-dimensional supra­molecular structure is formed through inter­molecular C—H⋯O hydrogen bonds and π–π stacking inter­actions between the pyridine and benzene rings [centroid–centroid distance = 3.779 (2) Å].

Related literature

For related structures with 2,4-dichloro­phen­oxy­acetate ligands, see: Liu (2010 ▶); Song & Xi (2006 ▶).graphic file with name e-67-0m493-scheme1.jpg

Experimental

Crystal data

  • [Co(C8H5Cl2O3)(C12H12N2)]

  • M r = 683.21

  • Monoclinic, Inline graphic

  • a = 13.397 (2) Å

  • b = 8.4152 (14) Å

  • c = 13.752 (2) Å

  • β = 112.570 (3)°

  • V = 1431.7 (4) Å3

  • Z = 2

  • Mo Kα radiation

  • μ = 1.02 mm−1

  • T = 296 K

  • 0.30 × 0.28 × 0.21 mm

Data collection

  • Bruker APEXII CCD diffractometer

  • Absorption correction: multi-scan (SADABS; Sheldrick, 1996 ▶) T min = 0.756, T max = 0.819

  • 10343 measured reflections

  • 2567 independent reflections

  • 2229 reflections with I > 2σ(I)

  • R int = 0.028

Refinement

  • R[F 2 > 2σ(F 2)] = 0.034

  • wR(F 2) = 0.106

  • S = 1.14

  • 2567 reflections

  • 187 parameters

  • H-atom parameters constrained

  • Δρmax = 0.28 e Å−3

  • Δρmin = −0.37 e Å−3

Data collection: APEX2 (Bruker, 2007 ▶); cell refinement: SAINT (Bruker, 2007 ▶); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: SHELXTL (Sheldrick, 2008 ▶) and DIAMOND (Brandenburg, 1999 ▶); software used to prepare material for publication: SHELXTL.

Supplementary Material

Crystal structure: contains datablocks I, global. DOI: 10.1107/S1600536811010579/hy2417sup1.cif

e-67-0m493-sup1.cif (16KB, cif)

Structure factors: contains datablocks I. DOI: 10.1107/S1600536811010579/hy2417Isup2.hkl

e-67-0m493-Isup2.hkl (126.1KB, hkl)

Additional supplementary materials: crystallographic information; 3D view; checkCIF report

Table 1. Hydrogen-bond geometry (Å, °).

D—H⋯A D—H H⋯A D⋯A D—H⋯A
C7—H7B⋯O3i 0.97 2.49 3.391 (3) 154
C12—H12⋯O2ii 0.93 2.40 3.157 (4) 139

Symmetry codes: (i) Inline graphic; (ii) Inline graphic.

Acknowledgments

The authors acknowledge Donghua University for supporting this work.

supplementary crystallographic information

Comment

In the structural investigation of 2,4-dichlorophenoxyacetate complexes, it has been found that 2,4-dichlorophenoxyacetic acid functions as a multidentate ligand (Liu, 2010; Song & Xi, 2006), with versatile binding and coordination modes. In this paper, we report the crystal structure of the title compound, a new Co(II) complex obtained by the reaction of 2,4-dichlorophenoxyacetic acid, 5,5'-dimethyl-2,2'-bipyridine and cobalt nitrate hexahydrate in an alkaline aqueous solution.

As illustrated in Fig. 1, the CoII atom, lying on a twofold rotation axis, exists in an distorted octahedral environment defined by four carboxylate O atoms from two different bidentate 2,4-dichlorophenoxyacetate ligands and two N atoms from one 5,5'-dimethyl-2,2'-bipyridine ligand. Intermolecular C—H···O hydrogen bonds (Table 1) and π–π stacking interactions are observed (Fig. 2). The centroid–centroid distance between a pyridine ring and a benzene ring at (1-x, 1-y, -z) is 3.779 (2) Å, thus indicating a weak π–π stacking interaction.

Experimental

A mixture of 2,4-dichlorophenoxyacetic acid (0.110 g, 0.5 mmol), 5,5'-dimethyl-2,2'-bipyridine (0.092 g, 0.5 mmol), cobalt nitrate hexahydrate (0.145 g, 0.5 mmol), NaOH (0.08 g, 0.2 mmol) and H2O (10 ml) was placed in a 23 ml Teflon-lined reactor, which was heated to 423 K for 3 days, and then cooled to room temperature at a rate of 10 K h-1. The block purple crystals obtained were washed with water and dried in air (yield: 45% based on Co).

Refinement

H atoms were positioned geometrically and treated as riding atoms, with C—H = 0.93 (atomatic), 0.96 (CH3) and 0.97 (CH2) Å and with Uiso(H) = 1.2(1.5 for methyl)Ueq(C). The hightest peak is located 0.86 Å from Cl1 and the deepest hole is located 0.73 Å from Cl1.

Figures

Fig. 1.

Fig. 1.

The molecular structure of the title compound, showing 50% probability displacement ellipsoids. [Symmetry code: (i) 1-x, y, 1/2-z.]

Fig. 2.

Fig. 2.

Packing diagram of the title compound. C—H···O hydrogen bonds and π–π interactions are shown as dashed lines. H atoms not involved in hydrogen bonds have been omitted for clarity.

Crystal data

[Co(C8H5Cl2O3)(C12H12N2)] F(000) = 694
Mr = 683.21 Dx = 1.585 Mg m−3
Monoclinic, P2/c Mo Kα radiation, λ = 0.71073 Å
Hall symbol: -P 2yc Cell parameters from 5837 reflections
a = 13.397 (2) Å θ = 2.8–27.9°
b = 8.4152 (14) Å µ = 1.02 mm−1
c = 13.752 (2) Å T = 296 K
β = 112.570 (3)° Block, purple
V = 1431.7 (4) Å3 0.30 × 0.28 × 0.21 mm
Z = 2

Data collection

Bruker APEXII CCD diffractometer 2567 independent reflections
Radiation source: fine-focus sealed tube 2229 reflections with I > 2σ(I)
graphite Rint = 0.028
φ and ω scans θmax = 25.2°, θmin = 1.7°
Absorption correction: multi-scan (SADABS; Sheldrick, 1996) h = −16→16
Tmin = 0.756, Tmax = 0.819 k = −10→9
10343 measured reflections l = −16→16

Refinement

Refinement on F2 Primary atom site location: structure-invariant direct methods
Least-squares matrix: full Secondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.034 Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.106 H-atom parameters constrained
S = 1.14 w = 1/[σ2(Fo2) + (0.0443P)2 + 1.0781P] where P = (Fo2 + 2Fc2)/3
2567 reflections (Δ/σ)max = 0.001
187 parameters Δρmax = 0.28 e Å−3
0 restraints Δρmin = −0.37 e Å−3

Fractional atomic coordinates and isotropic or equivalent isotropic displacement parameters (Å2)

x y z Uiso*/Ueq
C1 0.7163 (2) 0.1694 (3) 0.0470 (2) 0.0440 (7)
C2 0.7908 (3) 0.0498 (4) 0.0494 (2) 0.0514 (7)
C3 0.8966 (3) 0.0881 (5) 0.0701 (3) 0.0670 (10)
H3 0.9462 0.0089 0.0732 0.080*
C4 0.9289 (3) 0.2447 (5) 0.0861 (3) 0.0689 (10)
C5 0.8566 (3) 0.3634 (5) 0.0807 (3) 0.0693 (10)
H5 0.8790 0.4689 0.0900 0.083*
C6 0.7503 (3) 0.3250 (4) 0.0612 (3) 0.0563 (8)
H6 0.7013 0.4052 0.0577 0.068*
C7 0.5307 (2) 0.2314 (3) 0.0072 (2) 0.0426 (6)
H7A 0.4623 0.1799 −0.0321 0.051*
H7B 0.5408 0.3142 −0.0373 0.051*
C8 0.5240 (2) 0.3081 (3) 0.1036 (2) 0.0363 (6)
C9 0.2940 (3) 0.6310 (4) 0.2236 (2) 0.0543 (8)
H9 0.2643 0.5303 0.2203 0.065*
C10 0.2281 (3) 0.7617 (5) 0.2140 (3) 0.0638 (9)
C11 0.2754 (4) 0.9083 (5) 0.2190 (3) 0.0766 (12)
H11 0.2344 0.9995 0.2134 0.092*
C12 0.3815 (4) 0.9229 (4) 0.2320 (2) 0.0644 (10)
H12 0.4123 1.0226 0.2343 0.077*
C13 0.4424 (3) 0.7856 (3) 0.2417 (2) 0.0446 (7)
C14 0.1122 (3) 0.7418 (6) 0.2007 (4) 0.0932 (14)
H14A 0.0665 0.7517 0.1276 0.140*
H14B 0.0937 0.8222 0.2404 0.140*
H14C 0.1025 0.6387 0.2257 0.140*
Cl1 0.74751 (8) −0.14382 (10) 0.02104 (8) 0.0675 (3)
Cl2 1.06334 (9) 0.28906 (19) 0.11140 (13) 0.1133 (5)
Co1 0.5000 0.45028 (5) 0.2500 0.03575 (17)
N1 0.3975 (2) 0.6418 (3) 0.23719 (18) 0.0429 (6)
O1 0.61468 (16) 0.1179 (2) 0.02776 (17) 0.0482 (5)
O2 0.59131 (17) 0.2812 (2) 0.19438 (15) 0.0471 (5)
O3 0.44679 (16) 0.4039 (2) 0.08733 (15) 0.0460 (5)

Atomic displacement parameters (Å2)

U11 U22 U33 U12 U13 U23
C1 0.0543 (17) 0.0405 (15) 0.0426 (15) 0.0081 (13) 0.0248 (13) −0.0017 (12)
C2 0.0608 (19) 0.0482 (17) 0.0496 (17) 0.0134 (15) 0.0261 (15) 0.0016 (14)
C3 0.055 (2) 0.081 (3) 0.067 (2) 0.0212 (18) 0.0251 (17) 0.0001 (19)
C4 0.0500 (19) 0.084 (3) 0.074 (2) −0.0019 (18) 0.0245 (17) −0.013 (2)
C5 0.064 (2) 0.071 (2) 0.080 (3) −0.0110 (19) 0.0352 (19) −0.019 (2)
C6 0.061 (2) 0.0475 (18) 0.069 (2) 0.0053 (15) 0.0347 (17) −0.0076 (16)
C7 0.0504 (16) 0.0378 (14) 0.0447 (15) 0.0063 (12) 0.0239 (13) −0.0020 (12)
C8 0.0499 (15) 0.0237 (12) 0.0429 (15) −0.0003 (11) 0.0262 (13) 0.0016 (11)
C9 0.0608 (19) 0.0546 (19) 0.0493 (17) 0.0114 (15) 0.0232 (15) −0.0006 (14)
C10 0.079 (2) 0.067 (2) 0.0501 (19) 0.0319 (19) 0.0292 (17) 0.0086 (16)
C11 0.110 (3) 0.068 (3) 0.057 (2) 0.049 (2) 0.038 (2) 0.0093 (18)
C12 0.110 (3) 0.0374 (17) 0.0464 (18) 0.0194 (18) 0.0307 (19) 0.0019 (13)
C13 0.0789 (19) 0.0252 (13) 0.0302 (13) 0.0057 (12) 0.0217 (14) −0.0008 (10)
C14 0.079 (3) 0.116 (4) 0.087 (3) 0.045 (3) 0.035 (2) 0.009 (3)
Cl1 0.0849 (6) 0.0432 (5) 0.0889 (7) 0.0162 (4) 0.0495 (5) 0.0002 (4)
Cl2 0.0555 (6) 0.1306 (11) 0.1526 (12) −0.0124 (6) 0.0388 (7) −0.0322 (9)
Co1 0.0512 (3) 0.0227 (3) 0.0400 (3) 0.000 0.0248 (2) 0.000
N1 0.0590 (15) 0.0341 (13) 0.0390 (13) 0.0066 (11) 0.0225 (11) −0.0005 (10)
O1 0.0547 (12) 0.0372 (10) 0.0628 (13) 0.0063 (9) 0.0338 (10) −0.0038 (9)
O2 0.0657 (13) 0.0352 (10) 0.0421 (11) 0.0102 (9) 0.0227 (10) 0.0026 (8)
O3 0.0540 (11) 0.0430 (11) 0.0456 (11) 0.0099 (9) 0.0242 (9) −0.0030 (9)

Geometric parameters (Å, °)

C1—O1 1.355 (4) C9—H9 0.9300
C1—C6 1.375 (4) C10—C11 1.377 (6)
C1—C2 1.408 (4) C10—C14 1.500 (6)
C2—C3 1.374 (5) C11—C12 1.368 (6)
C2—Cl1 1.723 (3) C11—H11 0.9300
C3—C4 1.378 (6) C12—C13 1.391 (4)
C3—H3 0.9300 C12—H12 0.9300
C4—C5 1.372 (5) C13—N1 1.342 (4)
C4—Cl2 1.739 (4) C13—C13i 1.470 (6)
C5—C6 1.383 (5) C14—H14A 0.9600
C5—H5 0.9300 C14—H14B 0.9600
C6—H6 0.9300 C14—H14C 0.9600
C7—O1 1.419 (3) Co1—N1i 2.080 (2)
C7—C8 1.508 (4) Co1—N1 2.080 (2)
C7—H7A 0.9700 Co1—O3 2.1073 (19)
C7—H7B 0.9700 Co1—O3i 2.1074 (19)
C8—O2 1.249 (3) Co1—O2 2.1963 (19)
C8—O3 1.262 (3) Co1—O2i 2.1963 (19)
C9—N1 1.329 (4) Co1—C8i 2.467 (3)
C9—C10 1.385 (4)
O1—C1—C6 125.8 (3) C13—C12—H12 120.7
O1—C1—C2 115.2 (3) N1—C13—C12 120.5 (3)
C6—C1—C2 119.0 (3) N1—C13—C13i 115.62 (16)
C3—C2—C1 120.2 (3) C12—C13—C13i 123.9 (2)
C3—C2—Cl1 120.0 (3) C10—C14—H14A 109.5
C1—C2—Cl1 119.8 (2) C10—C14—H14B 109.5
C2—C3—C4 119.5 (3) H14A—C14—H14B 109.5
C2—C3—H3 120.3 C10—C14—H14C 109.5
C4—C3—H3 120.3 H14A—C14—H14C 109.5
C5—C4—C3 121.1 (3) H14B—C14—H14C 109.5
C5—C4—Cl2 120.6 (3) N1i—Co1—N1 78.44 (14)
C3—C4—Cl2 118.3 (3) N1i—Co1—O3 100.17 (8)
C4—C5—C6 119.5 (4) N1—Co1—O3 96.32 (8)
C4—C5—H5 120.2 N1i—Co1—O3i 96.32 (8)
C6—C5—H5 120.2 N1—Co1—O3i 100.17 (8)
C1—C6—C5 120.7 (3) O3—Co1—O3i 158.67 (11)
C1—C6—H6 119.7 N1i—Co1—O2 95.37 (9)
C5—C6—H6 119.7 N1—Co1—O2 155.51 (8)
O1—C7—C8 115.0 (2) O3—Co1—O2 61.12 (7)
O1—C7—H7A 108.5 O3i—Co1—O2 104.07 (8)
C8—C7—H7A 108.5 N1i—Co1—O2i 155.51 (8)
O1—C7—H7B 108.5 N1—Co1—O2i 95.37 (9)
C8—C7—H7B 108.5 O3—Co1—O2i 104.07 (8)
H7A—C7—H7B 107.5 O3i—Co1—O2i 61.12 (7)
O2—C8—O3 121.4 (2) O2—Co1—O2i 99.27 (11)
O2—C8—C7 122.5 (2) N1i—Co1—C8i 126.52 (9)
O3—C8—C7 116.1 (2) N1—Co1—C8i 98.99 (9)
N1—C9—C10 123.5 (3) O3—Co1—C8i 132.83 (9)
N1—C9—H9 118.2 O3i—Co1—C8i 30.76 (8)
C10—C9—H9 118.2 O2—Co1—C8i 103.57 (8)
C11—C10—C9 116.2 (4) O2i—Co1—C8i 30.36 (8)
C11—C10—C14 122.8 (3) C9—N1—C13 119.5 (3)
C9—C10—C14 121.0 (4) C9—N1—Co1 125.3 (2)
C12—C11—C10 121.5 (3) C13—N1—Co1 115.1 (2)
C12—C11—H11 119.2 C1—O1—C7 118.9 (2)
C10—C11—H11 119.2 C8—O2—Co1 86.89 (15)
C11—C12—C13 118.7 (3) C8—O3—Co1 90.57 (16)
C11—C12—H12 120.7

Symmetry codes: (i) −x+1, y, −z+1/2.

Hydrogen-bond geometry (Å, °)

D—H···A D—H H···A D···A D—H···A
C7—H7B···O3ii 0.97 2.49 3.391 (3) 154
C12—H12···O2iii 0.93 2.40 3.157 (4) 139

Symmetry codes: (ii) −x+1, −y+1, −z; (iii) −x+1, y+1, −z+1/2.

Footnotes

Supplementary data and figures for this paper are available from the IUCr electronic archives (Reference: HY2417).

References

  1. Brandenburg, K. (1999). DIAMOND Crystal Impact GbR, Bonn, Germany.
  2. Bruker (2007). APEX2 and SAINT Bruker AXS Inc., Madison, Wisconsin, USA.
  3. Liu, S.-Z. (2010). Acta Cryst. E66, m199. [DOI] [PMC free article] [PubMed]
  4. Sheldrick, G. M. (1996). SADABS University of Göttingen, Germany.
  5. Sheldrick, G. M. (2008). Acta Cryst. A64, 112–122. [DOI] [PubMed]
  6. Song, W.-D. & Xi, D.-L. (2006). Acta Cryst. E62, m2594–m2596.

Associated Data

This section collects any data citations, data availability statements, or supplementary materials included in this article.

Supplementary Materials

Crystal structure: contains datablocks I, global. DOI: 10.1107/S1600536811010579/hy2417sup1.cif

e-67-0m493-sup1.cif (16KB, cif)

Structure factors: contains datablocks I. DOI: 10.1107/S1600536811010579/hy2417Isup2.hkl

e-67-0m493-Isup2.hkl (126.1KB, hkl)

Additional supplementary materials: crystallographic information; 3D view; checkCIF report


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