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Acta Crystallographica Section E: Structure Reports Online logoLink to Acta Crystallographica Section E: Structure Reports Online
. 2011 Mar 31;67(Pt 4):m511. doi: 10.1107/S1600536811011081

(2-Oxido-1-naphthaldehyde benzoyl­hydrazonato-κ3 N,N′,O)pyridine­copper(II)

Li-Fei Zou a, Xiu-Yun Yang a, Ying Gao a, Hai-Bo Yao a, Yun-Hui Li a,*
PMCID: PMC3099804  PMID: 21754015

Abstract

In the mononuclear title compound, [CuII(C18H12N2O2)(C5H5N)], the CuII ion is coordinated by two O atoms and one N atom from the dianionic tridentate L 2− ligand (H2 L is 2-hy­droxy-1-naphthaldehyde benzoyl­hydrazide) and one N atom from a pyridine mol­ecule in a CuN2O2 distorted square-planar coordination environment.

Related literature

For the preparation of the Schiff base, see: Qiao et al. (2010 ▶). For chemically related applications arising from Schiff base compounds, see: Ando et al. (2004 ▶); Anford et al. (1998 ▶); Guo et al. (2010 ▶). For related structures, see: Ali et al. (2004 ▶); Sun et al. (2011 ▶); Xu et al. (2006 ▶); Yu et al. (2010 ▶).graphic file with name e-67-0m511-scheme1.jpg

Experimental

Crystal data

  • [Cu(C18H12N2O2)(C5H5N)]

  • M r = 430.94

  • Monoclinic, Inline graphic

  • a = 11.6196 (6) Å

  • b = 8.4254 (4) Å

  • c = 19.6194 (10) Å

  • β = 106.247 (1)°

  • V = 1844.03 (16) Å3

  • Z = 4

  • Mo Kα radiation

  • μ = 1.21 mm−1

  • T = 185 K

  • 0.14 × 0.12 × 0.10 mm

Data collection

  • Bruker APEXII CCD area detector diffractometer

  • Absorption correction: multi-scan (SADABS; Bruker, 2004 ▶) T min = 0.849, T max = 0.889

  • 8559 measured reflections

  • 3619 independent reflections

  • 2860 reflections with I > 2σ(I)

  • R int = 0.031

Refinement

  • R[F 2 > 2σ(F 2)] = 0.036

  • wR(F 2) = 0.086

  • S = 1.03

  • 3619 reflections

  • 262 parameters

  • H-atom parameters constrained

  • Δρmax = 0.46 e Å−3

  • Δρmin = −0.29 e Å−3

Data collection: APEX2 (Bruker, 2004 ▶); cell refinement: SAINT (Bruker, 2004 ▶); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: DIAMOND (Brandenburg, 1999 ▶); software used to prepare material for publication: SHELXL97 and publCIF (Westrip, 2010 ▶).

Supplementary Material

Crystal structure: contains datablocks I, global. DOI: 10.1107/S1600536811011081/zq2095sup1.cif

e-67-0m511-sup1.cif (19.1KB, cif)

Structure factors: contains datablocks I. DOI: 10.1107/S1600536811011081/zq2095Isup2.hkl

e-67-0m511-Isup2.hkl (177.5KB, hkl)

Additional supplementary materials: crystallographic information; 3D view; checkCIF report

Table 1. Selected geometric parameters (Å, °).

Cu1—O1 1.8853 (17)
Cu1—N1 1.902 (2)
Cu1—O2 1.9243 (17)
Cu1—N3 2.001 (2)
O1—Cu1—N1 93.17 (8)
O1—Cu1—O2 172.59 (7)
N1—Cu1—O2 81.30 (8)
O1—Cu1—N3 93.65 (8)
N1—Cu1—N3 171.07 (8)
O2—Cu1—N3 92.37 (8)

Acknowledgments

We thank the project supported by Jilin Provincial Science & Technology Department (20090535) and Changchun University of Science and Technology for financial support.

supplementary crystallographic information

Comment

Interest in the chemistry of Schiff base arises from their ability to bind to metal ions (Yu et al., 2010) as well as their antitumor activities and magnetochemistry (Ando et al., 2004; Guo et al., 2010). In fact, with some acylhydrazone ligands, their metal compounds are endowed with significantly improved industrial processes (Anford et al., 1998). We selected the 2-hydroxy-1-naphthaldehyde benzoylhydrazide (H2L) Schiff base ligand to construct coordination polymers with defined geometry, due to its combination of nitrogen and oxygen donor atoms. We report here the preparation and crystal structure of the Schiff base CuII title compound.

The present compound, [CuII(C18H12N2O2)(C5H5N)], together with the atom-numbering scheme, is illustrated in Fig. 1. Selected bond lengths and angles are given in Table 1. The CuII ion is coordinated by two O atoms and one N atom from the dianionic tridentate ligand L2- ligand (H2L is 2-hydroxy-1-naphthaldehyde benzoylhydrazide), and one N atom from a pyridine molecule. The CuII ion adopts a CuN2O2 distorted square-planar coordination environment. The Cu—O and Cu—N bond distances are similar to the corresponding bond distances observed in related compounds (Ali et al., 2004; Xu et al., 2006; Sun et al., 2011). There is no significant deviation of the metal centre from the N2O2 equatorial plane. The maximum displacements from the least-squares plane through N1, N3, O1, and O2 (rms deviation = 0.0895 Å) are 0.096 (1) and -0.094 (1) Å for atoms N1 and O2; Cu1 is -0.013 (1) Å below the mean plane. The coordinated pyridine molecule is almost coplanar with the previous N2O2 plane, the dihedral angle between the mean planes is 7.2 (1)°.

Experimental

The 2-hydroxy-1-naphthaldehyde benzoylhydrazide ligand (H2L) was prepared in a similar manner to the reported procedures (Qiao et al., 2010). The title compound was synthesized by adding pyridine (0.2 mL) to a solution of H2L (0.1 mmol) and Cu(OAc)2 (0.1 mmol) in methanol/dichloromethane (1:1, 20 mL), and the resulting mixture was stirred for about 6 h to afford a green solution. A week later, brown crystals of the title compound were isolated from the solution.

Refinement

All H atoms were placed in calculated positions and refined using a riding model [C–H = 0.95 Å and Uiso(H) = 1.5Ueq(C)].

Figures

Fig. 1.

Fig. 1.

A view of the title compound, showing the atomic numbering scheme. Displacement ellipsoids are drawn at the 40% probability level.

Crystal data

[Cu(C18H12N2O2)(C5H5N)] F(000) = 884
Mr = 430.94 Dx = 1.552 Mg m−3
Monoclinic, P21/c Mo Kα radiation, λ = 0.71073 Å
Hall symbol: -P 2ybc Cell parameters from 9033 reflections
a = 11.6196 (6) Å θ = 4.8–51.9°
b = 8.4254 (4) Å µ = 1.21 mm−1
c = 19.6194 (10) Å T = 185 K
β = 106.247 (1)° Block, brown
V = 1844.03 (16) Å3 0.14 × 0.12 × 0.10 mm
Z = 4

Data collection

Bruker APEXII CCD area detector diffractometer 3619 independent reflections
Radiation source: fine-focus sealed tube 2860 reflections with I > 2σ(I)
graphite Rint = 0.031
phi and ω scans θmax = 26.0°, θmin = 1.8°
Absorption correction: multi-scan (SADABS; Bruker, 2004) h = −14→14
Tmin = 0.849, Tmax = 0.889 k = −6→10
8559 measured reflections l = −18→24

Refinement

Refinement on F2 Primary atom site location: structure-invariant direct methods
Least-squares matrix: full Secondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.036 Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.086 H-atom parameters constrained
S = 1.03 w = 1/[σ2(Fo2) + (0.0353P)2 + 1.0945P] where P = (Fo2 + 2Fc2)/3
3619 reflections (Δ/σ)max = 0.001
262 parameters Δρmax = 0.46 e Å−3
0 restraints Δρmin = −0.29 e Å−3

Special details

Geometry. All esds (except the esd in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell esds are taken into account individually in the estimation of esds in distances, angles and torsion angles; correlations between esds in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell esds is used for estimating esds involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > 2sigma(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.

Fractional atomic coordinates and isotropic or equivalent isotropic displacement parameters (Å2)

x y z Uiso*/Ueq
Cu1 0.86976 (3) 0.13588 (4) 0.539632 (16) 0.02191 (11)
N1 0.89789 (18) 0.1188 (2) 0.44895 (11) 0.0200 (5)
N2 0.99966 (18) 0.1976 (3) 0.44156 (11) 0.0216 (5)
N3 0.86766 (19) 0.1483 (2) 0.64115 (11) 0.0226 (5)
O1 0.72604 (15) 0.0186 (2) 0.51138 (9) 0.0247 (4)
O2 1.00963 (15) 0.2688 (2) 0.55668 (9) 0.0238 (4)
C1 0.7084 (2) −0.1291 (3) 0.26471 (14) 0.0265 (6)
H1 0.7807 −0.0755 0.2655 0.032*
C2 0.6465 (3) −0.2069 (3) 0.20399 (14) 0.0300 (6)
H2 0.6762 −0.2046 0.1635 0.036*
C3 0.5411 (3) −0.2891 (3) 0.20059 (15) 0.0306 (6)
H3 0.4997 −0.3440 0.1586 0.037*
C4 0.4982 (3) −0.2894 (3) 0.25876 (15) 0.0313 (7)
H4 0.4259 −0.3444 0.2567 0.038*
C5 0.5588 (2) −0.2100 (3) 0.32154 (14) 0.0261 (6)
C6 0.5135 (2) −0.2110 (3) 0.38178 (15) 0.0295 (6)
H6 0.4416 −0.2672 0.3794 0.035*
C7 0.5702 (2) −0.1339 (3) 0.44258 (14) 0.0267 (6)
H7 0.5366 −0.1366 0.4815 0.032*
C8 0.6791 (2) −0.0489 (3) 0.44957 (13) 0.0221 (6)
C9 0.7276 (2) −0.0447 (3) 0.39116 (13) 0.0205 (5)
C10 0.6671 (2) −0.1266 (3) 0.32608 (13) 0.0225 (6)
C11 0.8363 (2) 0.0379 (3) 0.39455 (13) 0.0216 (6)
H11 0.8658 0.0333 0.3541 0.026*
C12 1.0481 (2) 0.2750 (3) 0.50057 (13) 0.0213 (6)
C13 1.1522 (2) 0.3790 (3) 0.50397 (14) 0.0219 (6)
C14 1.1922 (3) 0.4090 (3) 0.44463 (15) 0.0329 (7)
H14 1.1537 0.3597 0.4006 0.039*
C15 1.2877 (3) 0.5103 (4) 0.44947 (16) 0.0385 (7)
H15 1.3142 0.5301 0.4086 0.046*
C16 1.3449 (3) 0.5828 (3) 0.51292 (17) 0.0361 (7)
H16 1.4105 0.6522 0.5158 0.043*
C17 1.3063 (2) 0.5537 (3) 0.57197 (16) 0.0328 (7)
H17 1.3455 0.6032 0.6158 0.039*
C18 1.2107 (2) 0.4527 (3) 0.56769 (14) 0.0262 (6)
H18 1.1847 0.4334 0.6087 0.031*
C19 0.9510 (2) 0.2352 (3) 0.68806 (15) 0.0323 (7)
H19 1.0071 0.2946 0.6714 0.039*
C20 0.9577 (3) 0.2408 (4) 0.75936 (15) 0.0350 (7)
H20 1.0176 0.3027 0.7911 0.042*
C21 0.8762 (3) 0.1554 (3) 0.78380 (14) 0.0313 (7)
H21 0.8795 0.1564 0.8327 0.038*
C22 0.7900 (3) 0.0686 (4) 0.73614 (15) 0.0332 (7)
H22 0.7319 0.0101 0.7515 0.040*
C23 0.7889 (2) 0.0676 (3) 0.66537 (14) 0.0275 (6)
H23 0.7294 0.0067 0.6328 0.033*

Atomic displacement parameters (Å2)

U11 U22 U33 U12 U13 U23
Cu1 0.02087 (18) 0.02664 (19) 0.01893 (17) −0.00342 (14) 0.00672 (13) −0.00051 (14)
N1 0.0180 (11) 0.0199 (11) 0.0215 (11) −0.0023 (9) 0.0045 (9) 0.0025 (9)
N2 0.0180 (11) 0.0242 (11) 0.0227 (11) −0.0027 (9) 0.0062 (9) 0.0032 (9)
N3 0.0222 (11) 0.0258 (12) 0.0204 (11) −0.0017 (10) 0.0069 (9) −0.0012 (9)
O1 0.0248 (10) 0.0274 (10) 0.0233 (10) −0.0047 (8) 0.0092 (8) −0.0023 (8)
O2 0.0240 (10) 0.0289 (10) 0.0201 (9) −0.0047 (8) 0.0085 (8) −0.0025 (8)
C1 0.0250 (14) 0.0242 (14) 0.0281 (14) 0.0001 (12) 0.0037 (12) 0.0004 (12)
C2 0.0352 (16) 0.0268 (15) 0.0262 (15) 0.0026 (13) 0.0053 (13) −0.0006 (12)
C3 0.0333 (16) 0.0248 (15) 0.0277 (15) 0.0017 (13) −0.0016 (13) −0.0075 (12)
C4 0.0269 (15) 0.0256 (15) 0.0353 (16) −0.0040 (12) −0.0011 (13) −0.0040 (13)
C5 0.0266 (15) 0.0196 (14) 0.0296 (15) −0.0009 (11) 0.0038 (12) 0.0018 (12)
C6 0.0249 (15) 0.0262 (15) 0.0367 (17) −0.0071 (12) 0.0073 (13) 0.0012 (13)
C7 0.0243 (14) 0.0267 (15) 0.0298 (15) −0.0027 (12) 0.0086 (12) 0.0036 (12)
C8 0.0223 (13) 0.0189 (13) 0.0235 (14) 0.0012 (11) 0.0039 (11) 0.0027 (11)
C9 0.0202 (13) 0.0175 (13) 0.0217 (13) 0.0002 (10) 0.0025 (11) 0.0018 (10)
C10 0.0219 (13) 0.0178 (13) 0.0249 (14) 0.0031 (11) 0.0018 (11) 0.0029 (11)
C11 0.0248 (14) 0.0208 (13) 0.0201 (13) 0.0033 (11) 0.0076 (11) 0.0037 (11)
C12 0.0221 (14) 0.0214 (14) 0.0208 (13) 0.0040 (11) 0.0067 (11) 0.0038 (11)
C13 0.0199 (13) 0.0195 (13) 0.0261 (14) 0.0014 (11) 0.0061 (11) 0.0034 (11)
C14 0.0372 (17) 0.0342 (16) 0.0293 (16) −0.0103 (13) 0.0127 (13) −0.0024 (13)
C15 0.0434 (19) 0.0386 (18) 0.0400 (18) −0.0107 (15) 0.0222 (15) 0.0020 (14)
C16 0.0311 (16) 0.0264 (15) 0.054 (2) −0.0115 (13) 0.0172 (15) −0.0010 (14)
C17 0.0294 (16) 0.0286 (16) 0.0384 (17) −0.0077 (13) 0.0063 (13) −0.0087 (13)
C18 0.0271 (15) 0.0243 (14) 0.0284 (15) −0.0013 (12) 0.0096 (12) −0.0040 (12)
C19 0.0306 (16) 0.0393 (17) 0.0291 (15) −0.0132 (14) 0.0119 (13) −0.0048 (13)
C20 0.0385 (17) 0.0398 (18) 0.0264 (15) −0.0112 (14) 0.0087 (13) −0.0066 (13)
C21 0.0429 (17) 0.0316 (16) 0.0214 (14) −0.0048 (13) 0.0120 (13) −0.0026 (12)
C22 0.0374 (17) 0.0374 (17) 0.0287 (15) −0.0117 (14) 0.0156 (13) −0.0043 (13)
C23 0.0268 (15) 0.0327 (15) 0.0235 (14) −0.0072 (12) 0.0075 (12) −0.0031 (12)

Geometric parameters (Å, °)

Cu1—O1 1.8853 (17) C8—C9 1.412 (3)
Cu1—N1 1.902 (2) C9—C11 1.428 (3)
Cu1—O2 1.9243 (17) C9—C10 1.449 (3)
Cu1—N3 2.001 (2) C11—H11 0.9500
N1—C11 1.300 (3) C12—C13 1.480 (3)
N1—N2 1.398 (3) C13—C18 1.391 (4)
N2—C12 1.311 (3) C13—C14 1.392 (4)
N3—C23 1.331 (3) C14—C15 1.381 (4)
N3—C19 1.349 (3) C14—H14 0.9500
O1—C8 1.312 (3) C15—C16 1.379 (4)
O2—C12 1.300 (3) C15—H15 0.9500
C1—C2 1.374 (4) C16—C17 1.376 (4)
C1—C10 1.415 (4) C16—H16 0.9500
C1—H1 0.9500 C17—C18 1.384 (4)
C2—C3 1.392 (4) C17—H17 0.9500
C2—H2 0.9500 C18—H18 0.9500
C3—C4 1.367 (4) C19—C20 1.380 (4)
C3—H3 0.9500 C19—H19 0.9500
C4—C5 1.405 (4) C20—C21 1.378 (4)
C4—H4 0.9500 C20—H20 0.9500
C5—C6 1.422 (4) C21—C22 1.374 (4)
C5—C10 1.423 (4) C21—H21 0.9500
C6—C7 1.356 (4) C22—C23 1.385 (4)
C6—H6 0.9500 C22—H22 0.9500
C7—C8 1.427 (4) C23—H23 0.9500
C7—H7 0.9500
O1—Cu1—N1 93.17 (8) C1—C10—C5 116.4 (2)
O1—Cu1—O2 172.59 (7) C1—C10—C9 124.1 (2)
N1—Cu1—O2 81.30 (8) C5—C10—C9 119.6 (2)
O1—Cu1—N3 93.65 (8) N1—C11—C9 124.8 (2)
N1—Cu1—N3 171.07 (8) N1—C11—H11 117.6
O2—Cu1—N3 92.37 (8) C9—C11—H11 117.6
C11—N1—N2 116.8 (2) O2—C12—N2 124.3 (2)
C11—N1—Cu1 127.48 (17) O2—C12—C13 117.2 (2)
N2—N1—Cu1 115.64 (15) N2—C12—C13 118.6 (2)
C12—N2—N1 108.15 (19) C18—C13—C14 118.5 (2)
C23—N3—C19 117.9 (2) C18—C13—C12 119.5 (2)
C23—N3—Cu1 121.99 (18) C14—C13—C12 122.0 (2)
C19—N3—Cu1 120.08 (17) C15—C14—C13 120.3 (3)
C8—O1—Cu1 127.16 (16) C15—C14—H14 119.9
C12—O2—Cu1 110.51 (16) C13—C14—H14 119.9
C2—C1—C10 121.7 (3) C16—C15—C14 120.7 (3)
C2—C1—H1 119.2 C16—C15—H15 119.6
C10—C1—H1 119.2 C14—C15—H15 119.6
C1—C2—C3 121.3 (3) C17—C16—C15 119.5 (3)
C1—C2—H2 119.4 C17—C16—H16 120.2
C3—C2—H2 119.4 C15—C16—H16 120.2
C4—C3—C2 118.8 (3) C16—C17—C18 120.2 (3)
C4—C3—H3 120.6 C16—C17—H17 119.9
C2—C3—H3 120.6 C18—C17—H17 119.9
C3—C4—C5 121.4 (3) C17—C18—C13 120.7 (3)
C3—C4—H4 119.3 C17—C18—H18 119.6
C5—C4—H4 119.3 C13—C18—H18 119.6
C4—C5—C6 121.0 (3) N3—C19—C20 122.5 (3)
C4—C5—C10 120.5 (3) N3—C19—H19 118.8
C6—C5—C10 118.5 (2) C20—C19—H19 118.8
C7—C6—C5 121.8 (2) C21—C20—C19 119.0 (3)
C7—C6—H6 119.1 C21—C20—H20 120.5
C5—C6—H6 119.1 C19—C20—H20 120.5
C6—C7—C8 121.7 (2) C22—C21—C20 118.8 (3)
C6—C7—H7 119.2 C22—C21—H21 120.6
C8—C7—H7 119.2 C20—C21—H21 120.6
O1—C8—C9 125.6 (2) C21—C22—C23 119.1 (3)
O1—C8—C7 115.8 (2) C21—C22—H22 120.4
C9—C8—C7 118.6 (2) C23—C22—H22 120.4
C8—C9—C11 121.6 (2) N3—C23—C22 122.7 (3)
C8—C9—C10 119.9 (2) N3—C23—H23 118.6
C11—C9—C10 118.6 (2) C22—C23—H23 118.6

Footnotes

Supplementary data and figures for this paper are available from the IUCr electronic archives (Reference: ZQ2095).

References

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Associated Data

This section collects any data citations, data availability statements, or supplementary materials included in this article.

Supplementary Materials

Crystal structure: contains datablocks I, global. DOI: 10.1107/S1600536811011081/zq2095sup1.cif

e-67-0m511-sup1.cif (19.1KB, cif)

Structure factors: contains datablocks I. DOI: 10.1107/S1600536811011081/zq2095Isup2.hkl

e-67-0m511-Isup2.hkl (177.5KB, hkl)

Additional supplementary materials: crystallographic information; 3D view; checkCIF report


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