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Acta Crystallographica Section E: Structure Reports Online logoLink to Acta Crystallographica Section E: Structure Reports Online
. 2011 Mar 9;67(Pt 4):o828. doi: 10.1107/S1600536811008270

5-Chloro-3-cyclo­hexyl­sulfonyl-2-methyl-1-benzofuran

Hong Dae Choi a, Pil Ja Seo a, Byeng Wha Son b, Uk Lee b,*
PMCID: PMC3099810  PMID: 21754112

Abstract

In the title compound, C15H17ClO3S, the cyclo­hexyl ring adopts a chair conformation. In the crystal, mol­ecules are linked through weak inter­molecular C—H⋯O and C—H⋯π inter­actions.

Related literature

For the pharmacological activity of benzofuran compounds, see: Aslam et al. (2006); Galal et al. (2009); Khan et al. (2005). For natural products with benzofuran rings, see: Akgul & Anil (2003); Soekamto et al. (2003). For structural studies of related 3-aryl­sulfonyl-5-chloro-2-methyl-1-benzofuran derivatives, see: Choi et al. (2008, 2010).graphic file with name e-67-0o828-scheme1.jpg

Experimental

Crystal data

  • C15H17ClO3S

  • M r = 312.80

  • Monoclinic, Inline graphic

  • a = 14.3135 (2) Å

  • b = 9.2829 (2) Å

  • c = 11.3433 (2) Å

  • β = 107.566 (1)°

  • V = 1436.91 (4) Å3

  • Z = 4

  • Mo Kα radiation

  • μ = 0.42 mm−1

  • T = 173 K

  • 0.29 × 0.18 × 0.11 mm

Data collection

  • Bruker SMART APEXII CCD diffractometer

  • Absorption correction: multi-scan (SADABS; Bruker, 2009) T min = 0.891, T max = 0.954

  • 13251 measured reflections

  • 3287 independent reflections

  • 2856 reflections with I > 2σ(I)

  • R int = 0.027

Refinement

  • R[F 2 > 2σ(F 2)] = 0.034

  • wR(F 2) = 0.093

  • S = 1.07

  • 3287 reflections

  • 182 parameters

  • H-atom parameters constrained

  • Δρmax = 0.49 e Å−3

  • Δρmin = −0.37 e Å−3

Data collection: APEX2 (Bruker, 2009); cell refinement: SAINT (Bruker, 2009); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: ORTEP-3 (Farrugia, 1997) and DIAMOND (Brandenburg, 1998); software used to prepare material for publication: SHELXL97.

Supplementary Material

Crystal structure: contains datablocks global, I. DOI: 10.1107/S1600536811008270/bh2340sup1.cif

e-67-0o828-sup1.cif (18.2KB, cif)

Structure factors: contains datablocks I. DOI: 10.1107/S1600536811008270/bh2340Isup2.hkl

e-67-0o828-Isup2.hkl (161.3KB, hkl)

Additional supplementary materials: crystallographic information; 3D view; checkCIF report

Table 1. Hydrogen-bond geometry (Å, °).

Cg is the centroid of the benzene ring.

D—H⋯A D—H H⋯A DA D—H⋯A
C6—H6⋯O3i 0.95 2.54 3.2630 (19) 133
C10—H10⋯O2ii 1.00 2.42 3.3899 (19) 162
C9—H9CCgiii 0.98 2.69 3.577 (2) 151

Symmetry codes: (i) Inline graphic; (ii) Inline graphic; (iii) Inline graphic.

supplementary crystallographic information

Comment

Many compounds containing a benzofuran ring exhibit interesting pharmacological properties such as antifungal, antitumor and antiviral, and antimicrobial activities (Aslam et al., 2006; Galal et al., 2009; Khan et al., 2005). These compounds occur in a wide range of natural products (Akgul & Anil, 2003; Soekamto et al., 2003). As a part of our ongoing study of the substituent effect on the solid state structures of 3-arylsulfonyl-5-chloro-2-methyl-1-benzofuran analogues (Choi et al., 2008, 2010), we report herein the crystal structure of the title compound.

In the title molecule (Fig. 1), the benzofuran unit is essentially planar, with a mean deviation of 0.009 (1) Å from the least-squares plane defined by the nine constituent atoms. The cyclohexyl ring is in the chair form. The molecular packing (Fig. 2) is stabilized by weak intermolecular C–H···O hydrogen bonds; the first one between a benzene H atom and the O atom of the sulfonyl unit (Table 1: C6–H6···O3i), and the second one between a cyclohexyl H atom and the O atom of the sulfonyl unit (Table 1: C10–H10···O2ii). The crystal packing (Fig. 2) is further stabilized by intermolecular C–H···π interactions between a methyl H atoms and the benzene rings (Table 1: C9–H9C···Cgiii, Cg is the centroid of the C2···C7 benzene ring).

Experimental

77% 3-chloroperoxybenzoic acid (515 mg, 2.3 mmol) was added in small portions to a stirred solution of 5-chloro-3-cyclohexylsulfanyl-2-methyl-1-benzofuran (389 mg, 1.1 mmol) in dichloromethane (40 mL) at 273 K. After being stirred at room temperature for 5 h, the mixture was washed with saturated sodium bicarbonate solution and the organic layer was separated, dried over magnesium sulfate, filtered and concentrated at reduced pressure. The residue was purified by column chromatography (hexane-ethyl acetate, 4:1 v/v) to afford the title compound as a colorless solid [yield 73%, m.p. 440-441 K; Rf = 0.63 (hexane-ethyl acetate, 4:1 v/v)]. Single crystals suitable for X-ray diffraction were prepared by slow evaporation of a solution of the title compound in ethyl acetate at room temperature.

Refinement

All H atoms were positioned geometrically and refined using a riding model, with C–H = 0.95 Å for aryl, 1.00 Å for methine, 0.99 Å for methylene and 0.98 Å for methyl H atoms, respectively. Uiso(H) = 1.2Ueq(C) for aryl, methine and methylene, and 1.5Ueq(C) for methyl H atoms.

Figures

Fig. 1.

Fig. 1.

The molecular structure of the title compound. Displacement ellipsoids are drawn at the 50% probability level and H atoms are presented as small spheres of arbitrary radius.

Fig. 2.

Fig. 2.

A view of the C–H···O and C–H···π interactions (dotted lines) in the crystal structure of the title compound [Symmetry codes: (i) x, y-1, z; (ii) x, -y+3/2, z-1/2; (iii) -x+1, -y+1, -z+1; (iv) x, -y+3/2, z+1/2; (v) x, y+1, z].

Crystal data

C15H17ClO3S F(000) = 656
Mr = 312.80 Dx = 1.446 Mg m3
Monoclinic, P21/c Melting point: 440 K
Hall symbol: -P 2ybc Mo Kα radiation, λ = 0.71073 Å
a = 14.3135 (2) Å Cell parameters from 5109 reflections
b = 9.2829 (2) Å θ = 2.7–27.5°
c = 11.3433 (2) Å µ = 0.42 mm1
β = 107.566 (1)° T = 173 K
V = 1436.91 (4) Å3 Block, colourless
Z = 4 0.29 × 0.18 × 0.11 mm

Data collection

Bruker SMART APEXII CCD diffractometer 3287 independent reflections
Radiation source: rotating anode 2856 reflections with I > 2σ(I)
graphite multilayer Rint = 0.027
Detector resolution: 10.0 pixels mm-1 θmax = 27.5°, θmin = 1.5°
φ and ω scans h = −18→18
Absorption correction: multi-scan (SADABS; Bruker, 2009) k = −12→10
Tmin = 0.891, Tmax = 0.954 l = −14→14
13251 measured reflections

Refinement

Refinement on F2 Primary atom site location: structure-invariant direct methods
Least-squares matrix: full Secondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.034 Hydrogen site location: difference Fourier map
wR(F2) = 0.093 H-atom parameters constrained
S = 1.07 w = 1/[σ2(Fo2) + (0.0479P)2 + 0.5583P] where P = (Fo2 + 2Fc2)/3
3287 reflections (Δ/σ)max = 0.001
182 parameters Δρmax = 0.49 e Å3
0 restraints Δρmin = −0.36 e Å3
0 constraints

Fractional atomic coordinates and isotropic or equivalent isotropic displacement parameters (Å2)

x y z Uiso*/Ueq
S 0.31521 (3) 0.72877 (4) 0.40822 (3) 0.02105 (11)
Cl 0.18841 (3) 0.20832 (5) 0.64837 (4) 0.03919 (13)
O2 0.28307 (9) 0.73602 (12) 0.51704 (10) 0.0298 (3)
O1 0.43749 (7) 0.36827 (12) 0.34930 (10) 0.0255 (2)
O3 0.38824 (8) 0.82960 (12) 0.39699 (11) 0.0320 (3)
C1 0.35822 (10) 0.55463 (15) 0.40040 (13) 0.0208 (3)
C2 0.33118 (10) 0.42681 (15) 0.45538 (13) 0.0209 (3)
C3 0.27018 (10) 0.39605 (17) 0.52741 (14) 0.0242 (3)
H3 0.2347 0.4694 0.5537 0.029*
C4 0.26403 (11) 0.25316 (18) 0.55855 (15) 0.0266 (3)
C5 0.31494 (11) 0.14251 (17) 0.52184 (15) 0.0294 (3)
H5 0.3075 0.0459 0.5452 0.035*
C6 0.37639 (11) 0.17320 (17) 0.45146 (15) 0.0284 (3)
H6 0.4125 0.1000 0.4260 0.034*
C7 0.38230 (10) 0.31567 (16) 0.42022 (14) 0.0230 (3)
C8 0.42122 (10) 0.51346 (16) 0.33784 (13) 0.0226 (3)
C9 0.47360 (11) 0.59044 (18) 0.26251 (15) 0.0292 (3)
H9A 0.4262 0.6427 0.1956 0.044*
H9B 0.5091 0.5208 0.2272 0.044*
H9C 0.5201 0.6588 0.3148 0.044*
C10 0.21039 (10) 0.74609 (15) 0.27476 (13) 0.0208 (3)
H10 0.2316 0.7276 0.1998 0.025*
C11 0.13094 (11) 0.63719 (17) 0.27601 (15) 0.0285 (3)
H11A 0.1104 0.6511 0.3511 0.034*
H11B 0.1570 0.5382 0.2778 0.034*
C12 0.04281 (12) 0.6570 (2) 0.16061 (17) 0.0362 (4)
H12A 0.0626 0.6364 0.0859 0.043*
H12B −0.0094 0.5880 0.1628 0.043*
C13 0.00340 (12) 0.8095 (2) 0.15363 (18) 0.0367 (4)
H13A −0.0523 0.8209 0.0773 0.044*
H13B −0.0209 0.8278 0.2253 0.044*
C14 0.08265 (12) 0.91795 (19) 0.15367 (16) 0.0338 (4)
H14A 0.0561 1.0166 0.1522 0.041*
H14B 0.1027 0.9049 0.0781 0.041*
C15 0.17212 (11) 0.90049 (16) 0.26764 (15) 0.0274 (3)
H15A 0.2241 0.9684 0.2627 0.033*
H15B 0.1539 0.9231 0.3431 0.033*

Atomic displacement parameters (Å2)

U11 U22 U33 U12 U13 U23
S 0.02279 (18) 0.01684 (18) 0.02228 (19) 0.00067 (12) 0.00493 (14) −0.00147 (13)
Cl 0.0382 (2) 0.0426 (3) 0.0397 (3) −0.00341 (17) 0.01619 (19) 0.01558 (19)
O2 0.0390 (6) 0.0287 (6) 0.0215 (5) 0.0062 (5) 0.0088 (5) −0.0033 (4)
O1 0.0275 (5) 0.0225 (5) 0.0282 (6) 0.0036 (4) 0.0111 (4) −0.0011 (4)
O3 0.0265 (5) 0.0208 (5) 0.0445 (7) −0.0038 (4) 0.0044 (5) 0.0007 (5)
C1 0.0219 (6) 0.0188 (7) 0.0213 (7) 0.0000 (5) 0.0057 (5) 0.0003 (5)
C2 0.0213 (6) 0.0183 (7) 0.0206 (7) 0.0006 (5) 0.0027 (5) 0.0004 (5)
C3 0.0239 (7) 0.0243 (7) 0.0241 (7) 0.0019 (6) 0.0068 (6) 0.0015 (6)
C4 0.0235 (7) 0.0300 (8) 0.0246 (7) −0.0025 (6) 0.0047 (6) 0.0063 (6)
C5 0.0329 (8) 0.0203 (7) 0.0302 (8) −0.0011 (6) 0.0025 (6) 0.0050 (6)
C6 0.0305 (8) 0.0197 (7) 0.0318 (8) 0.0037 (6) 0.0045 (6) −0.0012 (6)
C7 0.0226 (7) 0.0221 (7) 0.0227 (7) 0.0011 (5) 0.0045 (5) −0.0011 (6)
C8 0.0220 (6) 0.0221 (7) 0.0220 (7) −0.0001 (5) 0.0039 (5) −0.0005 (6)
C9 0.0282 (7) 0.0339 (9) 0.0274 (8) −0.0029 (6) 0.0114 (6) 0.0012 (7)
C10 0.0214 (7) 0.0206 (7) 0.0196 (7) 0.0007 (5) 0.0052 (5) 0.0002 (5)
C11 0.0274 (7) 0.0225 (7) 0.0326 (8) −0.0035 (6) 0.0047 (6) 0.0011 (6)
C12 0.0282 (8) 0.0351 (9) 0.0387 (10) −0.0083 (7) 0.0000 (7) −0.0002 (8)
C13 0.0231 (8) 0.0417 (10) 0.0403 (10) 0.0006 (7) 0.0022 (7) 0.0053 (8)
C14 0.0286 (8) 0.0321 (9) 0.0363 (9) 0.0039 (6) 0.0030 (7) 0.0096 (7)
C15 0.0264 (7) 0.0211 (7) 0.0319 (8) 0.0014 (6) 0.0046 (6) 0.0030 (6)

Geometric parameters (Å, °)

S—O3 1.4372 (11) C9—H9B 0.9800
S—O2 1.4431 (12) C9—H9C 0.9800
S—C1 1.7416 (15) C10—C11 1.525 (2)
S—C10 1.7882 (14) C10—C15 1.528 (2)
Cl—C4 1.7461 (16) C10—H10 1.0000
O1—C8 1.3673 (18) C11—C12 1.530 (2)
O1—C7 1.3760 (18) C11—H11A 0.9900
C1—C8 1.360 (2) C11—H11B 0.9900
C1—C2 1.447 (2) C12—C13 1.517 (3)
C2—C7 1.391 (2) C12—H12A 0.9900
C2—C3 1.393 (2) C12—H12B 0.9900
C3—C4 1.382 (2) C13—C14 1.516 (2)
C3—H3 0.9500 C13—H13A 0.9900
C4—C5 1.394 (2) C13—H13B 0.9900
C5—C6 1.384 (2) C14—C15 1.529 (2)
C5—H5 0.9500 C14—H14A 0.9900
C6—C7 1.378 (2) C14—H14B 0.9900
C6—H6 0.9500 C15—H15A 0.9900
C8—C9 1.480 (2) C15—H15B 0.9900
C9—H9A 0.9800
O3—S—O2 118.27 (7) C11—C10—C15 111.46 (12)
O3—S—C1 108.80 (7) C11—C10—S 111.72 (10)
O2—S—C1 107.20 (7) C15—C10—S 108.96 (10)
O3—S—C10 108.26 (7) C11—C10—H10 108.2
O2—S—C10 108.50 (7) C15—C10—H10 108.2
C1—S—C10 105.04 (7) S—C10—H10 108.2
C8—O1—C7 107.10 (11) C10—C11—C12 109.68 (13)
C8—C1—C2 107.48 (13) C10—C11—H11A 109.7
C8—C1—S 126.00 (11) C12—C11—H11A 109.7
C2—C1—S 126.49 (11) C10—C11—H11B 109.7
C7—C2—C3 119.53 (13) C12—C11—H11B 109.7
C7—C2—C1 104.62 (13) H11A—C11—H11B 108.2
C3—C2—C1 135.84 (13) C13—C12—C11 110.76 (14)
C4—C3—C2 116.49 (14) C13—C12—H12A 109.5
C4—C3—H3 121.8 C11—C12—H12A 109.5
C2—C3—H3 121.8 C13—C12—H12B 109.5
C3—C4—C5 123.47 (15) C11—C12—H12B 109.5
C3—C4—Cl 118.45 (13) H12A—C12—H12B 108.1
C5—C4—Cl 118.08 (12) C14—C13—C12 110.68 (14)
C6—C5—C4 120.08 (15) C14—C13—H13A 109.5
C6—C5—H5 120.0 C12—C13—H13A 109.5
C4—C5—H5 120.0 C14—C13—H13B 109.5
C7—C6—C5 116.40 (14) C12—C13—H13B 109.5
C7—C6—H6 121.8 H13A—C13—H13B 108.1
C5—C6—H6 121.8 C13—C14—C15 111.43 (14)
O1—C7—C6 125.55 (14) C13—C14—H14A 109.3
O1—C7—C2 110.42 (13) C15—C14—H14A 109.3
C6—C7—C2 124.03 (14) C13—C14—H14B 109.3
C1—C8—O1 110.38 (13) C15—C14—H14B 109.3
C1—C8—C9 134.19 (14) H14A—C14—H14B 108.0
O1—C8—C9 115.43 (13) C10—C15—C14 109.85 (13)
C8—C9—H9A 109.5 C10—C15—H15A 109.7
C8—C9—H9B 109.5 C14—C15—H15A 109.7
H9A—C9—H9B 109.5 C10—C15—H15B 109.7
C8—C9—H9C 109.5 C14—C15—H15B 109.7
H9A—C9—H9C 109.5 H15A—C15—H15B 108.2
H9B—C9—H9C 109.5
O3—S—C1—C8 −29.39 (15) C3—C2—C7—C6 0.5 (2)
O2—S—C1—C8 −158.38 (13) C1—C2—C7—C6 −178.90 (14)
C10—S—C1—C8 86.33 (14) C2—C1—C8—O1 −0.51 (16)
O3—S—C1—C2 152.86 (12) S—C1—C8—O1 −178.61 (10)
O2—S—C1—C2 23.87 (14) C2—C1—C8—C9 179.31 (15)
C10—S—C1—C2 −91.41 (13) S—C1—C8—C9 1.2 (3)
C8—C1—C2—C7 0.17 (16) C7—O1—C8—C1 0.64 (16)
S—C1—C2—C7 178.26 (11) C7—O1—C8—C9 −179.21 (12)
C8—C1—C2—C3 −179.09 (16) O3—S—C10—C11 177.11 (11)
S—C1—C2—C3 −1.0 (2) O2—S—C10—C11 −53.37 (12)
C7—C2—C3—C4 −0.6 (2) C1—S—C10—C11 61.01 (12)
C1—C2—C3—C4 178.57 (15) O3—S—C10—C15 −59.29 (12)
C2—C3—C4—C5 0.0 (2) O2—S—C10—C15 70.23 (12)
C2—C3—C4—Cl −179.83 (11) C1—S—C10—C15 −175.40 (10)
C3—C4—C5—C6 0.7 (2) C15—C10—C11—C12 57.47 (17)
Cl—C4—C5—C6 −179.44 (12) S—C10—C11—C12 179.64 (12)
C4—C5—C6—C7 −0.8 (2) C10—C11—C12—C13 −57.59 (19)
C8—O1—C7—C6 178.58 (14) C11—C12—C13—C14 57.6 (2)
C8—O1—C7—C2 −0.52 (16) C12—C13—C14—C15 −56.9 (2)
C5—C6—C7—O1 −178.78 (14) C11—C10—C15—C14 −56.53 (17)
C5—C6—C7—C2 0.2 (2) S—C10—C15—C14 179.73 (11)
C3—C2—C7—O1 179.63 (12) C13—C14—C15—C10 55.92 (19)
C1—C2—C7—O1 0.21 (16)

Hydrogen-bond geometry (Å, °)

Cg is the centroid of the benzene ring.
D—H···A D—H H···A D···A D—H···A
C6—H6···O3i 0.95 2.54 3.2630 (19) 133
C10—H10···O2ii 1.00 2.42 3.3899 (19) 162
C9—H9C···Cgiii 0.98 2.69 3.577 (2) 151

Symmetry codes: (i) x, y−1, z; (ii) x, −y+3/2, z−1/2; (iii) −x+1, −y+1, −z+1.

Footnotes

Supplementary data and figures for this paper are available from the IUCr electronic archives (Reference: BH2340).

References

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  3. Brandenburg, K. (1998). DIAMOND Crystal Impact GbR, Bonn, Germany.
  4. Bruker (2009). APEX2, SADABS and SAINT Bruker AXS Inc., Madison, Wisconsin, USA.
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  7. Farrugia, L. J. (1997). J. Appl. Cryst. 30, 565.
  8. Galal, S. A., Abd El-All, A. S., Abdallah, M. M. & El-Diwani, H. I. (2009). Bioorg. Med. Chem. Lett 19, 2420–2428. [DOI] [PubMed]
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Associated Data

This section collects any data citations, data availability statements, or supplementary materials included in this article.

Supplementary Materials

Crystal structure: contains datablocks global, I. DOI: 10.1107/S1600536811008270/bh2340sup1.cif

e-67-0o828-sup1.cif (18.2KB, cif)

Structure factors: contains datablocks I. DOI: 10.1107/S1600536811008270/bh2340Isup2.hkl

e-67-0o828-Isup2.hkl (161.3KB, hkl)

Additional supplementary materials: crystallographic information; 3D view; checkCIF report


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