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Acta Crystallographica Section E: Structure Reports Online logoLink to Acta Crystallographica Section E: Structure Reports Online
. 2011 Mar 19;67(Pt 4):o921. doi: 10.1107/S1600536811009809

1,4-Bis[(2-pyridyl­eth­yl)imino­meth­yl]benzene

Haleden Chiririwa a, John R Moss a, Hong Su a,*, Denver Hendricks b, Reinout Meijboom c
PMCID: PMC3099859  PMID: 21754192

Abstract

In the title compound, C22H22N4, the centroid of the benzene ring is located on an inversion centre. The dihedral angle between the benzene and pyridine rings is 10.94 (5)°. The crystal structure displays weak inter­molecular C—H⋯N hydrogen bonding and C—H⋯π inter­actions.

Related literature

For related compounds, see: Chakraborty et al. (1999); Haga et al. (1985). graphic file with name e-67-0o921-scheme1.jpg

Experimental

Crystal data

  • C22H22N4

  • M r = 342.44

  • Monoclinic, Inline graphic

  • a = 6.0078 (6) Å

  • b = 26.023 (3) Å

  • c = 6.1319 (7) Å

  • β = 106.009 (2)°

  • V = 921.47 (17) Å3

  • Z = 2

  • Mo Kα radiation

  • μ = 0.08 mm−1

  • T = 173 K

  • 0.26 × 0.24 × 0.17 mm

Data collection

  • Bruker Kappa DUO APEXII diffractometer

  • 11941 measured reflections

  • 2288 independent reflections

  • 1945 reflections with I > 2σ(I)

  • R int = 0.024

Refinement

  • R[F 2 > 2σ(F 2)] = 0.040

  • wR(F 2) = 0.110

  • S = 1.06

  • 2288 reflections

  • 118 parameters

  • H-atom parameters constrained

  • Δρmax = 0.28 e Å−3

  • Δρmin = −0.20 e Å−3

Data collection: APEX2 (Bruker, 2006); cell refinement: SAINT (Bruker, 2006); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: X-SEED (Barbour, 2001); software used to prepare material for publication: publCIF (Westrip, 2010).

Supplementary Material

Crystal structure: contains datablocks I, global. DOI: 10.1107/S1600536811009809/go2006sup1.cif

e-67-0o921-sup1.cif (16KB, cif)

Structure factors: contains datablocks I. DOI: 10.1107/S1600536811009809/go2006Isup2.hkl

e-67-0o921-Isup2.hkl (112.5KB, hkl)

Additional supplementary materials: crystallographic information; 3D view; checkCIF report

Table 1. Hydrogen-bond geometry (Å, °).

Cg1 and Cg2 are the centroids of the C1–C5/N1 and C9–C11/C9′–C11′ rings, respectively.

D—H⋯A D—H H⋯A DA D—H⋯A
C3—H3⋯N1i 0.95 2.74 3.544 (3) 143 (3)
C4—H4⋯N2i 0.95 2.69 3.593 (2) 159 (4)
C7—H7A⋯N1ii 0.99 2.87 3.847 (2) 171 (5)
C2—H2⋯Cg1iii 0.95 2.88 3.826 (4) 172 (5)
C6—H6ACg2iv 0.99 2.90 3.508 (3) 120 (2)

Symmetry codes: (i) Inline graphic; (ii) Inline graphic; (iii) Inline graphic; (iv) Inline graphic.

Acknowledgments

We gratefully acknowledge Mintek and Project AuTEK for funding this project.

supplementary crystallographic information

Comment

This work originates from our interest in developing a new class of tetradentate ligands. To the best of our knowledge, this work demonstrates the first example of neutral pyridinyldimine-based bridging ligand. The title compound might be expected to behave as a tetradentate chelating agent, in which both of the N atoms from the imine might coordinate, along with the two pyridinyl N atoms. Chakraborty et al. (1999) reported coordination of similar ligands to ruthenium whilst Haga and Koizumi (1985) reported their coordination to molybdenum. The structure of the title compound crystallized in space group P21/n with Z = 2. The molecule, shown in Fig. 1, has a center of inversion at the centroid of the benzene ring and was located in special positions at Wyckoff positon a. The conformation of the molecule is best described by the dihedral angle of the central ring and pyridyl ring of 10.94 (5)°. The structure is stabilized by weak hydrogen bonds of the type C—H···N and C—H···π, the metrics of which are given in Table 1. The C—H···N intermolecular interactions, as well as C6—H6A···Ring 1 (of C10—C9—C11—C10'-C9'-C11'), connect the parallel neighbouring molecules into 2-dimentional layers. And these layers are then linked along the b axis into 3-dimentional herringbone packing via C2—H2···Ring 2 (of C1—C2—C3—C4—C5—N1) interactions, as shown in Fig.2.

Experimental

The title compound was synthesized as follows: a solution of benzene 1,4-dicarboxaldehyde (0.50 g, 3.73 mmol) in methanol (10 ml) was added dropwise to a stirred solution of 2-(pyridin-2-yl)ethanamine(0.91 g, 7.42 mmol) in methanol (10 ml). The mixture was stirred at room temperature for ca 16 h. The precipitate was filtered off and washed with diethylether and dried under vacuum for 4 h affording a fine shiny white powder in 85% yield. M.p.: does not melt below 260 °C. Recrystallization by slow diffusion of Et2O into a concentrated CH2Cl2 of the solution gave colorless crystals suitable for X-ray structure analysis.

Refinement

All non-hydrogen atoms were refined anisotropically and all hydrogen atoms were placed in idealized positions and refined with a riding model with Uiso set at 1.2 or 1.5 times Ueq of their parent atoms and fixed C—H bond lengths.

Figures

Fig. 1.

Fig. 1.

Molecular structure of titled compound showing the atomic numbering scheme. All non-hydrogen atoms were presented with ellipsoidal model with probability level 40%. Half of the molecule without atomic labels was generated via centre of symmetry (symmetry code: -x, -y, -z).

Fig. 2.

Fig. 2.

Projection viewed along [100] showing 3-D herringbone packing. Only the hydrogen atoms that invloved in C—H···N and C—H···π intermolecular interactions (see the list in Table 1) are shown and labelled. The red dotted lines represent the weak interactions.

Crystal data

C22H22N4 F(000) = 364
Mr = 342.44 Dx = 1.234 Mg m3
Monoclinic, P21/n Mo Kα radiation, λ = 0.71073 Å
Hall symbol: -P 2yn Cell parameters from 11941 reflections
a = 6.0078 (6) Å θ = 3.1–28.3°
b = 26.023 (3) Å µ = 0.08 mm1
c = 6.1319 (7) Å T = 173 K
β = 106.009 (2)° Plate, colourless
V = 921.47 (17) Å3 0.26 × 0.24 × 0.17 mm
Z = 2

Data collection

Bruker Kappa DUO APEXII diffractometer 1945 reflections with I > 2σ(I)
Radiation source: fine-focus sealed tube Rint = 0.024
graphite θmax = 28.3°, θmin = 3.1°
0.5° φ scans and ω h = −8→8
11941 measured reflections k = −34→33
2288 independent reflections l = −8→8

Refinement

Refinement on F2 Primary atom site location: structure-invariant direct methods
Least-squares matrix: full Secondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.040 Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.110 H-atom parameters constrained
S = 1.06 w = 1/[σ2(Fo2) + (0.0506P)2 + 0.2363P] where P = (Fo2 + 2Fc2)/3
2288 reflections (Δ/σ)max < 0.001
118 parameters Δρmax = 0.28 e Å3
0 restraints Δρmin = −0.20 e Å3

Special details

Experimental. Data for (I):IR (KBr): 1610 cm-1 (C=N, imine) 1HNMR:(CDCl3) δH 8.55(ddd, 2H, J =0.8 Hz, J = 1.7 Hz, J = 4.8 Hz) 8.21 (t, 2H, J = 1.3 Hz) 7.69 (s, 2H) 7.55 (dt, 2H, J = 1.9 Hz, J = 7.7 Hz) 7.11 (m, 2H) 4.03 (dt, 8H, J = 1.2 Hz, J = 7.2 Hz) 3.19(t, 4H, J = 7.2 Hz); 13CNMR: (400 MHz, CDCl3) δ 161.05, 159.45, 149.37, 138.88, 136.13, 128.21, 123.67, 121.24, 61.18, 39.61; Analysis calculated for C22H22N4:C, 77.16%; H, 6.48%; N, 16.36%; Found: C, 77.19%; H, 6.22%; N, 16.52%; EI—MS: m/z 249.90[M – C7H6N]+.Half sphere of data collected using SAINT strategy (Bruker, 2006). Crystal to detector distance = 50 mm; combination of φ and ω scans of 0.5°, 40 s per °, 2 iterations.
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.

Fractional atomic coordinates and isotropic or equivalent isotropic displacement parameters (Å2)

x y z Uiso*/Ueq
N1 1.01974 (18) 0.16910 (4) 0.82099 (17) 0.0365 (3)
C1 1.1434 (2) 0.20288 (5) 0.9711 (2) 0.0431 (3)
H1 1.2675 0.2201 0.9339 0.052*
N2 0.40565 (16) 0.09448 (4) 0.35620 (15) 0.0282 (2)
C2 1.1022 (2) 0.21422 (5) 1.1750 (2) 0.0406 (3)
H2 1.1936 0.2389 1.2748 0.049*
C3 0.9248 (2) 0.18885 (5) 1.2306 (2) 0.0381 (3)
H3 0.8928 0.1952 1.3715 0.046*
C4 0.7937 (2) 0.15394 (4) 1.07884 (19) 0.0312 (3)
H4 0.6689 0.1363 1.1130 0.037*
C5 0.84667 (18) 0.14496 (4) 0.87569 (18) 0.0252 (2)
C6 0.7121 (2) 0.10708 (4) 0.7047 (2) 0.0327 (3)
H6A 0.6662 0.0778 0.7860 0.039*
H6B 0.8134 0.0936 0.6152 0.039*
C7 0.49617 (19) 0.13015 (4) 0.54368 (19) 0.0283 (2)
H7A 0.3778 0.1365 0.6254 0.034*
H7B 0.5346 0.1634 0.4844 0.034*
C8 0.21489 (18) 0.07288 (4) 0.34628 (17) 0.0251 (2)
H8 0.1384 0.0810 0.4584 0.030*
C9 0.10603 (17) 0.03556 (4) 0.16772 (17) 0.0231 (2)
C10 −0.10072 (18) 0.01157 (4) 0.17194 (18) 0.0259 (2)
H10 −0.1702 0.0196 0.2894 0.031*
C11 0.20546 (18) 0.02380 (4) −0.00674 (18) 0.0254 (2)
H11 0.3453 0.0401 −0.0122 0.030*

Atomic displacement parameters (Å2)

U11 U22 U33 U12 U13 U23
N1 0.0364 (6) 0.0409 (6) 0.0340 (5) −0.0050 (4) 0.0129 (4) 0.0008 (4)
C1 0.0345 (6) 0.0402 (7) 0.0532 (8) −0.0114 (5) 0.0095 (6) 0.0025 (6)
N2 0.0260 (5) 0.0295 (5) 0.0272 (5) −0.0033 (4) 0.0044 (4) −0.0064 (4)
C2 0.0428 (7) 0.0273 (6) 0.0400 (7) −0.0030 (5) −0.0081 (5) −0.0037 (5)
C3 0.0552 (8) 0.0312 (6) 0.0266 (6) 0.0043 (5) 0.0089 (5) −0.0037 (5)
C4 0.0354 (6) 0.0288 (5) 0.0317 (6) −0.0010 (5) 0.0131 (5) −0.0008 (4)
C5 0.0249 (5) 0.0240 (5) 0.0242 (5) 0.0031 (4) 0.0025 (4) 0.0002 (4)
C6 0.0342 (6) 0.0275 (6) 0.0311 (6) 0.0025 (5) 0.0000 (5) −0.0061 (4)
C7 0.0257 (5) 0.0278 (5) 0.0296 (5) −0.0019 (4) 0.0045 (4) −0.0074 (4)
C8 0.0244 (5) 0.0252 (5) 0.0250 (5) 0.0007 (4) 0.0056 (4) −0.0027 (4)
C9 0.0219 (5) 0.0217 (5) 0.0239 (5) 0.0004 (4) 0.0034 (4) −0.0009 (4)
C10 0.0252 (5) 0.0284 (5) 0.0252 (5) −0.0010 (4) 0.0088 (4) −0.0026 (4)
C11 0.0214 (5) 0.0262 (5) 0.0289 (5) −0.0030 (4) 0.0073 (4) −0.0014 (4)

Geometric parameters (Å, °)

N1—C5 1.3344 (15) C6—C7 1.5204 (16)
N1—C1 1.3395 (17) C6—H6A 0.9900
C1—C2 1.372 (2) C6—H6B 0.9900
C1—H1 0.9500 C7—H7A 0.9900
N2—C8 1.2628 (14) C7—H7B 0.9900
N2—C7 1.4609 (13) C8—C9 1.4748 (14)
C2—C3 1.3739 (19) C8—H8 0.9500
C2—H2 0.9500 C9—C11 1.3954 (14)
C3—C4 1.3811 (17) C9—C10 1.3968 (14)
C3—H3 0.9500 C10—C11i 1.3848 (14)
C4—C5 1.3880 (15) C10—H10 0.9500
C4—H4 0.9500 C11—C10i 1.3848 (14)
C5—C6 1.5023 (15) C11—H11 0.9500
C5—N1—C1 117.33 (10) C7—C6—H6B 109.0
N1—C1—C2 124.19 (12) H6A—C6—H6B 107.8
N1—C1—H1 117.9 N2—C7—C6 109.03 (9)
C2—C1—H1 117.9 N2—C7—H7A 109.9
C8—N2—C7 117.17 (9) C6—C7—H7A 109.9
C1—C2—C3 118.02 (11) N2—C7—H7B 109.9
C1—C2—H2 121.0 C6—C7—H7B 109.9
C3—C2—H2 121.0 H7A—C7—H7B 108.3
C2—C3—C4 119.10 (11) N2—C8—C9 122.66 (9)
C2—C3—H3 120.4 N2—C8—H8 118.7
C4—C3—H3 120.4 C9—C8—H8 118.7
C3—C4—C5 119.07 (11) C11—C9—C10 119.15 (9)
C3—C4—H4 120.5 C11—C9—C8 121.17 (9)
C5—C4—H4 120.5 C10—C9—C8 119.68 (9)
N1—C5—C4 122.27 (10) C11i—C10—C9 120.70 (9)
N1—C5—C6 116.12 (10) C11i—C10—H10 119.6
C4—C5—C6 121.60 (10) C9—C10—H10 119.6
C5—C6—C7 113.13 (9) C10i—C11—C9 120.15 (9)
C5—C6—H6A 109.0 C10i—C11—H11 119.9
C7—C6—H6A 109.0 C9—C11—H11 119.9
C5—C6—H6B 109.0
C5—N1—C1—C2 −0.4 (2) C8—N2—C7—C6 111.41 (11)
N1—C1—C2—C3 0.9 (2) C5—C6—C7—N2 167.84 (9)
C1—C2—C3—C4 −1.10 (19) C7—N2—C8—C9 −179.14 (9)
C2—C3—C4—C5 0.83 (18) N2—C8—C9—C11 −2.76 (16)
C1—N1—C5—C4 0.06 (17) N2—C8—C9—C10 177.48 (10)
C1—N1—C5—C6 −179.64 (10) C11—C9—C10—C11i 0.57 (17)
C3—C4—C5—N1 −0.30 (17) C8—C9—C10—C11i −179.67 (9)
C3—C4—C5—C6 179.39 (10) C10—C9—C11—C10i −0.57 (17)
N1—C5—C6—C7 −94.33 (12) C8—C9—C11—C10i 179.68 (9)
C4—C5—C6—C7 85.97 (13)

Symmetry codes: (i) −x, −y, −z.

Hydrogen-bond geometry (Å, °)

Cg1 and Cg2 are the centroids of the C1–C5/N1 and C9–C11/C9'–C11' rings, respectively.
D—H···A D—H H···A D···A D—H···A
C3—H3···N1ii 0.95 2.74 3.544 (3) 143 (3)
C4—H4···N2ii 0.95 2.69 3.593 (2) 159 (4)
C7—H7A···N1iii 0.99 2.87 3.847 (2) 171 (5)
C2—H2···Cg1iv 0.95 2.88 3.826 (4) 172 (5)
C6—H6A···Cg2v 0.99 2.90 3.508 (3) 120 (2)

Symmetry codes: (ii) x, y, z+1; (iii) x−1, y, z; (iv) x+1/2, −y+1/2, z+1/2; (v) x+1, y, z+1.

Footnotes

Supplementary data and figures for this paper are available from the IUCr electronic archives (Reference: GO2006).

References

  1. Barbour, L. J. (2001). J. Supramol. Chem. 1, 189–191.
  2. Bruker (2006). APEX2 and SAINT Bruker AXS Inc., Madison, Wisconsin, USA.
  3. Chakraborty, S., Munshi, P. & Lahiri, G. K. (1999). Polyhedron, 18, 1437–1444.
  4. Haga, M. & Koizumi, K. (1985). Inorg. Chim. Acta, 104, 47–50.
  5. Sheldrick, G. M. (2008). Acta Cryst. A64, 112–122. [DOI] [PubMed]
  6. Westrip, S. P. (2010). J. Appl. Cryst. 43, 920–925.

Associated Data

This section collects any data citations, data availability statements, or supplementary materials included in this article.

Supplementary Materials

Crystal structure: contains datablocks I, global. DOI: 10.1107/S1600536811009809/go2006sup1.cif

e-67-0o921-sup1.cif (16KB, cif)

Structure factors: contains datablocks I. DOI: 10.1107/S1600536811009809/go2006Isup2.hkl

e-67-0o921-Isup2.hkl (112.5KB, hkl)

Additional supplementary materials: crystallographic information; 3D view; checkCIF report


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