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Acta Crystallographica Section E: Structure Reports Online logoLink to Acta Crystallographica Section E: Structure Reports Online
. 2011 Mar 19;67(Pt 4):o906. doi: 10.1107/S1600536811009561

7-Hy­droxy-8-isopropyl-1,1,4a-trimethyl-4a,9,10,10a-tetra­hydro-phenanthren-2(1H)-one

Ahmed Benharref a, Essêdiya Lassaba a,*, Noureddine Mazoir a, Jean-Claude Daran b, Moha Berraho a
PMCID: PMC3099889  PMID: 21754180

Abstract

The title compound, C20H26O2, was isolated from a chloro­form extract of Tetra­clinis articulata wood. The mol­ecule contains three fused rings which exhibit different conformations. The non-aromatic oxo-substituted ring has a screw-boat conformation, while the central ring has a half-chair conformation. In the crystal, mol­ecules are linked to each other by inter­molecular O—H⋯O hydrogen bonds involving the carbonyl and hy­droxy groups.

Related literature

For background to the biological activity of diterpenoids, see: Atta-ur-Rahman & Choudhary (1999 ▶); Azucena & Mobashery (2001 ▶); Panter et al. (2002 ▶); Ulusu et al. (2002 ▶). For their use in traditional medicine, see: Bellakhdar (1997 ▶) and for their medicinal properties, see: Barrero et al. (2003 ▶); Comte et al. (1995 ▶); Evidente et al. (1997 ▶). For the synthesis see: Zeroual et al. (2007 ▶). For conformational analysis, see: Cremer & Pople (1975 ▶).graphic file with name e-67-0o906-scheme1.jpg

Experimental

Crystal data

  • C20H26O2

  • M r = 298.41

  • Monoclinic, Inline graphic

  • a = 11.6731 (8) Å

  • b = 6.4314 (4) Å

  • c = 12.1488 (10) Å

  • β = 111.592 (9)°

  • V = 848.06 (11) Å3

  • Z = 2

  • Mo Kα radiation

  • μ = 0.07 mm−1

  • T = 180 K

  • 0.48 × 0.36 × 0.29 mm

Data collection

  • Agilent Xcalibur Eos Gemini ultra diffractometer

  • 9252 measured reflections

  • 1893 independent reflections

  • 1591 reflections with I > 2σ(I)

  • R int = 0.066

Refinement

  • R[F 2 > 2σ(F 2)] = 0.047

  • wR(F 2) = 0.128

  • S = 1.03

  • 1893 reflections

  • 207 parameters

  • 1 restraint

  • H-atom parameters constrained

  • Δρmax = 0.18 e Å−3

  • Δρmin = −0.22 e Å−3

Data collection: CrysAlis PRO (Agilent, 2010 ▶); cell refinement: CrysAlis PRO; data reduction: CrysAlis PRO; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: ORTEP-3 for Windows (Farrugia, 1997 ▶) and PLATON (Spek, 2009 ▶); software used to prepare material for publication: WinGX (Farrugia, 1999 ▶).

Supplementary Material

Crystal structure: contains datablocks global, I. DOI: 10.1107/S1600536811009561/fj2405sup1.cif

e-67-0o906-sup1.cif (18.9KB, cif)

Structure factors: contains datablocks I. DOI: 10.1107/S1600536811009561/fj2405Isup2.hkl

e-67-0o906-Isup2.hkl (91.2KB, hkl)

Additional supplementary materials: crystallographic information; 3D view; checkCIF report

Table 1. Hydrogen-bond geometry (Å, °).

D—H⋯A D—H H⋯A D⋯A D—H⋯A
O2—H2⋯O1i 0.84 2.03 2.791 (3) 150

Symmetry code: (i) Inline graphic.

Acknowledgments

We thank the National Center of Scientific and Technol­ogical Research (CNRST) for supporting our scientific research.

supplementary crystallographic information

Comment

Among the diterpenoids, the class with the phenantrene skeleton may have biological activities which have been recently reported (Atta-ur-Rahman et al.,1999; Azucena et al.,2001; Panter et al., 2002; Ulusu et al., 2002). These diterpenoids are often isolated from the medicinal plants. In our study, we were interested to the medicinal plant, Tetraclinis articulata which is used in Moroccan traditional medicine (Bellakhdar, 1997). Some of its oxygenated compounds are effective as an antifongic (Evidente et al., 1997), cytotoxic (Comte et al., 1995) and inhibit various human leukocyte functions(Barrero et al., 2003). In order to isolate similar compounds, we have studied the chloroform extract of Tetraclinis articulata wood. Thus, the extraction with chloroform using a soxhlet apparatus allow us isolate the totarolenone (7-hydroxy-8-isporpyl-1,1,4a-trimethyl- 4a,9,10,10a- tetrahydro-1H-phenanthren-3-one) a derivative of totarolone (7-hydroxy-8-isporpyl-1,1,4a-trimethyl-3,4,4a,9,10,10a- hexahydophenantren-2-one) (Zeroual et al., 2007). The structure of this new product was determined by NMR spectral analysis of 1H, 13 C and mass spectroscopy and confirmed by its single-crystal X-ray structure. The molecule (I) is built up from three fused six-membered rings. The non aromatic oxo-substituted ring has a screw boat conformation, as indicated by the total puckering amplitude QT = 0.490 (3)Å and spherical polar angle θ =67.1 (4)° with φ = 272.2 (3)°. While the central ring has a half chair conformation with QT = 0.545 (3) Å, θ =53.4 (3)°, φ = 278.5 (3)° (Cremer & Pople, 1975). Molecules are linked by intermolecular O—H···O hydrogen bonds (Table 1, Figure 2) involving the carbonyl and the hydroxy groups and propagate in chain parallel to the a axis.

Experimental

50 g of wood powder Tetraclinis articulata was extracted with chloroform in Soxhlet apparatus during 24 h. After evaporating the solvent under reduced pressure, a residue of 3.2 g was obtained. Chromatography on a column of silica gel of this residue eluting with hexan - ethyl acetate (94 / 4), allowed us to isolate in pure form 640 mg of 7-hydroxy-8-isporpyl- 1, 1,4 a-trimethyl-4a, 9,10,10 a-tetrahydro-1H-phenanthrene-3-one. Crystallization of this product was performed at room temperature in a solution of ethyl acetate.

Refinement

All H atoms were fixed geometrically and treated as riding with C—H = 0.96 Å (methyl), 0.97 Å (methylene), 0.98Å (methine) with Uiso(H) = 1.2Ueq (methylene, methine) or Uiso(H) = 1.5Ueq (methyl). In the absence of significant anomalous scattering, the absolute configuration could not be reliably determined and thus 1554 Friedel pairs were merged and any references to the Flack parameter were removed.

Figures

Fig. 1.

Fig. 1.

: Molecular structure of the title compound with the atom-labelling scheme. Displacement ellipsoids are drawn at the 30% probability. level. H atoms are represented as small spheres of arbitrary radii.

Fig. 2.

Fig. 2.

: Partial packing view showing the O—H···O interactions (dashed lines) and the formation of a chain parallel to the b axis. H atoms not involved in hydrogen bonding have been omitted for clarity. [Symmetry code:(i) x + 1, y, z]

Crystal data

C20H26O2 F(000) = 324
Mr = 298.41 Dx = 1.169 Mg m−3
Monoclinic, P21 Mo Kα radiation, λ = 0.71073 Å
Hall symbol: P 2yb Cell parameters from 3905 reflections
a = 11.6731 (8) Å θ = 3.6–29.2°
b = 6.4314 (4) Å µ = 0.07 mm−1
c = 12.1488 (10) Å T = 180 K
β = 111.592 (9)° Prism, colourless
V = 848.06 (11) Å3 0.48 × 0.36 × 0.29 mm
Z = 2

Data collection

Agilent Xcalibur Eos Gemini ultra diffractometer 1591 reflections with I > 2σ(I)
Radiation source: Enhance (Mo) X-ray Source Rint = 0.066
graphite θmax = 26.4°, θmin = 3.7°
Detector resolution: 16.1978 pixels mm-1 h = −14→14
ω scans k = −8→8
9252 measured reflections l = −15→15
1893 independent reflections

Refinement

Refinement on F2 Primary atom site location: structure-invariant direct methods
Least-squares matrix: full Secondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.047 Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.128 H-atom parameters constrained
S = 1.03 w = 1/[σ2(Fo2) + (0.0659P)2 + 0.2266P] where P = (Fo2 + 2Fc2)/3
1893 reflections (Δ/σ)max < 0.001
207 parameters Δρmax = 0.18 e Å−3
1 restraint Δρmin = −0.22 e Å−3

Special details

Geometry. All s.u.'s (except the s.u. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell s.u.'s are taken into account individually in the estimation of s.u.'s in distances, angles and torsion angles; correlations between s.u.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell s.u.'s is used for estimating s.u.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.

Fractional atomic coordinates and isotropic or equivalent isotropic displacement parameters (Å2)

x y z Uiso*/Ueq
C1 −0.3286 (2) 0.3531 (5) 0.7146 (2) 0.0290 (6)
C2 −0.4104 (2) 0.3898 (5) 0.5849 (3) 0.0314 (7)
C3 −0.3525 (3) 0.4063 (6) 0.4963 (3) 0.0364 (7)
H3 −0.4016 0.3822 0.4154 0.045 (10)*
C4 −0.2337 (3) 0.4540 (5) 0.5251 (3) 0.0324 (7)
H4 −0.2019 0.4667 0.4638 0.047 (10)*
C4A −0.1473 (2) 0.4886 (5) 0.6526 (2) 0.0283 (6)
C4B −0.0133 (2) 0.4386 (4) 0.6696 (2) 0.0274 (6)
C5 0.0337 (2) 0.5177 (5) 0.5876 (3) 0.0296 (6)
H5 −0.0179 0.6000 0.5237 0.036*
C6 0.1537 (2) 0.4788 (5) 0.5974 (3) 0.0303 (7)
H6 0.1846 0.5371 0.5420 0.036*
C7 0.2287 (2) 0.3544 (5) 0.6887 (2) 0.0299 (6)
C8 0.1866 (2) 0.2729 (5) 0.7742 (2) 0.0287 (6)
C8A 0.0651 (2) 0.3211 (5) 0.7647 (2) 0.0273 (6)
C9 0.0224 (2) 0.2470 (6) 0.8626 (3) 0.0351 (7)
H9A 0.0867 0.2814 0.9402 0.042*
H9B 0.0136 0.0938 0.8579 0.042*
C10 −0.0995 (2) 0.3422 (6) 0.8568 (2) 0.0336 (7)
H10A −0.1329 0.2626 0.9079 0.040*
H10B −0.0861 0.4875 0.8856 0.040*
C10A −0.1905 (2) 0.3373 (5) 0.7292 (2) 0.0282 (6)
H10 −0.1817 0.1953 0.6997 0.034*
C11 0.2702 (3) 0.1345 (6) 0.8719 (3) 0.0383 (8)
H11 0.2229 0.0978 0.9231 0.046*
C12 0.3000 (3) −0.0718 (6) 0.8246 (4) 0.0526 (9)
H12A 0.3534 −0.0452 0.7800 0.079*
H12B 0.2233 −0.1371 0.7725 0.079*
H21A 0.3421 −0.1649 0.8911 0.079*
C13 0.3870 (3) 0.2455 (7) 0.9521 (3) 0.0474 (9)
H13A 0.4396 0.2761 0.9071 0.071*
H13B 0.4317 0.1559 1.0195 0.071*
H13C 0.3646 0.3757 0.9810 0.071*
C15 −0.3538 (3) 0.5228 (6) 0.7922 (3) 0.0422 (8)
H15A −0.4422 0.5272 0.7773 0.063*
H15B −0.3274 0.6580 0.7727 0.063*
H15C −0.3079 0.4913 0.8758 0.063*
C16 −0.3680 (3) 0.1419 (5) 0.7484 (3) 0.0371 (7)
H16A −0.3634 0.0355 0.6925 0.056*
H16B −0.4528 0.1515 0.7457 0.056*
H16C −0.3130 0.1042 0.8286 0.056*
C18 −0.1553 (3) 0.7207 (5) 0.6809 (3) 0.0427 (8)
H18A −0.1174 0.8047 0.6362 0.064*
H18B −0.1117 0.7442 0.7658 0.064*
H18C −0.2419 0.7606 0.6587 0.064*
O1 −0.52293 (18) 0.4045 (4) 0.5543 (2) 0.0440 (6)
O2 0.34674 (17) 0.3068 (4) 0.69940 (18) 0.0396 (6)
H2 0.3623 0.3635 0.6442 0.059*

Atomic displacement parameters (Å2)

U11 U22 U33 U12 U13 U23
C1 0.0193 (12) 0.0352 (16) 0.0359 (15) 0.0034 (12) 0.0140 (11) 0.0023 (13)
C2 0.0210 (13) 0.0368 (17) 0.0389 (15) 0.0037 (12) 0.0138 (11) 0.0033 (13)
C3 0.0240 (14) 0.056 (2) 0.0299 (14) 0.0060 (14) 0.0106 (11) 0.0032 (14)
C4 0.0247 (14) 0.0416 (18) 0.0355 (15) 0.0089 (12) 0.0165 (12) 0.0062 (13)
C4A 0.0213 (13) 0.0343 (16) 0.0338 (14) 0.0029 (12) 0.0153 (11) 0.0026 (13)
C4B 0.0208 (13) 0.0313 (16) 0.0338 (14) −0.0026 (11) 0.0145 (11) −0.0017 (12)
C5 0.0245 (14) 0.0317 (15) 0.0345 (14) 0.0003 (12) 0.0129 (11) 0.0013 (12)
C6 0.0258 (14) 0.0365 (17) 0.0346 (14) −0.0068 (13) 0.0182 (12) −0.0015 (13)
C7 0.0166 (12) 0.0403 (17) 0.0354 (15) −0.0036 (13) 0.0126 (11) −0.0034 (14)
C8 0.0204 (13) 0.0335 (15) 0.0335 (14) −0.0016 (12) 0.0115 (11) 0.0003 (12)
C8A 0.0180 (12) 0.0329 (15) 0.0334 (14) −0.0017 (11) 0.0125 (11) 0.0000 (12)
C9 0.0195 (14) 0.0533 (19) 0.0340 (15) −0.0013 (13) 0.0117 (11) 0.0041 (14)
C10 0.0235 (13) 0.0494 (19) 0.0310 (14) −0.0024 (14) 0.0136 (11) 0.0025 (14)
C10A 0.0171 (12) 0.0396 (16) 0.0309 (14) 0.0030 (12) 0.0124 (10) 0.0005 (13)
C11 0.0193 (13) 0.055 (2) 0.0408 (16) 0.0001 (14) 0.0119 (12) 0.0067 (15)
C12 0.0414 (19) 0.049 (2) 0.061 (2) 0.0066 (16) 0.0101 (17) 0.0116 (18)
C13 0.0300 (17) 0.069 (3) 0.0414 (18) −0.0075 (16) 0.0115 (14) 0.0022 (18)
C15 0.0279 (16) 0.053 (2) 0.054 (2) −0.0006 (15) 0.0258 (15) −0.0119 (17)
C16 0.0241 (14) 0.0423 (18) 0.0495 (18) 0.0017 (13) 0.0187 (13) 0.0097 (15)
C18 0.0426 (19) 0.0361 (19) 0.061 (2) 0.0025 (14) 0.0327 (17) 0.0003 (16)
O1 0.0197 (10) 0.0687 (17) 0.0459 (12) 0.0077 (10) 0.0146 (9) 0.0109 (12)
O2 0.0212 (10) 0.0626 (16) 0.0409 (12) 0.0021 (10) 0.0184 (9) 0.0044 (11)

Geometric parameters (Å, °)

C1—C2 1.531 (4) C9—H9A 0.9900
C1—C16 1.538 (4) C9—H9B 0.9900
C1—C15 1.539 (4) C10—C10A 1.523 (4)
C1—C10A 1.559 (3) C10—H10A 0.9900
C2—O1 1.230 (3) C10—H10B 0.9900
C2—C3 1.471 (4) C10A—H10 1.0000
C3—C4 1.336 (4) C11—C13 1.530 (5)
C3—H3 0.9500 C11—C12 1.536 (5)
C4—C4A 1.522 (4) C11—H11 1.0000
C4—H4 0.9500 C12—H12A 0.9800
C4A—C4B 1.535 (4) C12—H12B 0.9800
C4A—C18 1.542 (4) C12—H21A 0.9800
C4A—C10A 1.554 (4) C13—H13A 0.9800
C4B—C5 1.397 (4) C13—H13B 0.9800
C4B—C8A 1.401 (4) C13—H13C 0.9800
C5—C6 1.385 (4) C15—H15A 0.9800
C5—H5 0.9500 C15—H15B 0.9800
C6—C7 1.386 (4) C15—H15C 0.9800
C6—H6 0.9500 C16—H16A 0.9800
C7—O2 1.371 (3) C16—H16B 0.9800
C7—C8 1.403 (4) C16—H16C 0.9800
C8—C8A 1.414 (4) C18—H18A 0.9800
C8—C11 1.517 (4) C18—H18B 0.9800
C8A—C9 1.526 (4) C18—H18C 0.9800
C9—C10 1.526 (4) O2—H2 0.8400
C2—C1—C16 106.1 (2) C9—C10—H10A 109.8
C2—C1—C15 109.5 (2) C10A—C10—H10B 109.8
C16—C1—C15 108.7 (2) C9—C10—H10B 109.8
C2—C1—C10A 110.7 (2) H10A—C10—H10B 108.3
C16—C1—C10A 108.1 (2) C10—C10A—C4A 109.7 (2)
C15—C1—C10A 113.5 (2) C10—C10A—C1 114.8 (2)
O1—C2—C3 120.0 (3) C4A—C10A—C1 116.2 (2)
O1—C2—C1 121.0 (2) C10—C10A—H10 104.9
C3—C2—C1 119.0 (2) C4A—C10A—H10 104.9
C4—C3—C2 122.5 (3) C1—C10A—H10 104.9
C4—C3—H3 118.8 C8—C11—C13 113.0 (3)
C2—C3—H3 118.8 C8—C11—C12 112.5 (3)
C3—C4—C4A 122.4 (2) C13—C11—C12 111.7 (3)
C3—C4—H4 118.8 C8—C11—H11 106.3
C4A—C4—H4 118.8 C13—C11—H11 106.3
C4—C4A—C4B 111.5 (2) C12—C11—H11 106.3
C4—C4A—C18 107.3 (3) C11—C12—H12A 109.5
C4B—C4A—C18 108.4 (3) C11—C12—H12B 109.5
C4—C4A—C10A 106.2 (2) H12A—C12—H12B 109.5
C4B—C4A—C10A 109.2 (2) C11—C12—H21A 109.5
C18—C4A—C10A 114.4 (2) H12A—C12—H21A 109.5
C5—C4B—C8A 118.4 (2) H12B—C12—H21A 109.5
C5—C4B—C4A 118.4 (2) C11—C13—H13A 109.5
C8A—C4B—C4A 123.2 (2) C11—C13—H13B 109.5
C6—C5—C4B 121.5 (3) H13A—C13—H13B 109.5
C6—C5—H5 119.2 C11—C13—H13C 109.5
C4B—C5—H5 119.2 H13A—C13—H13C 109.5
C5—C6—C7 119.6 (2) H13B—C13—H13C 109.5
C5—C6—H6 120.2 C1—C15—H15A 109.5
C7—C6—H6 120.2 C1—C15—H15B 109.5
O2—C7—C6 121.4 (2) H15A—C15—H15B 109.5
O2—C7—C8 117.4 (2) C1—C15—H15C 109.5
C6—C7—C8 121.2 (2) H15A—C15—H15C 109.5
C7—C8—C8A 118.1 (3) H15B—C15—H15C 109.5
C7—C8—C11 119.9 (2) C1—C16—H16A 109.5
C8A—C8—C11 122.0 (2) C1—C16—H16B 109.5
C4B—C8A—C8 121.1 (2) H16A—C16—H16B 109.5
C4B—C8A—C9 120.7 (2) C1—C16—H16C 109.5
C8—C8A—C9 118.2 (2) H16A—C16—H16C 109.5
C8A—C9—C10 113.9 (3) H16B—C16—H16C 109.5
C8A—C9—H9A 108.8 C4A—C18—H18A 109.5
C10—C9—H9A 108.8 C4A—C18—H18B 109.5
C8A—C9—H9B 108.8 H18A—C18—H18B 109.5
C10—C9—H9B 108.8 C4A—C18—H18C 109.5
H9A—C9—H9B 107.7 H18A—C18—H18C 109.5
C10A—C10—C9 109.2 (2) H18B—C18—H18C 109.5
C10A—C10—H10A 109.8 C7—O2—H2 109.5

Hydrogen-bond geometry (Å, °)

D—H···A D—H H···A D···A D—H···A
O2—H2···O1i 0.84 2.03 2.791 (3) 150

Symmetry codes: (i) x+1, y, z.

Footnotes

Supplementary data and figures for this paper are available from the IUCr electronic archives (Reference: FJ2405).

References

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Associated Data

This section collects any data citations, data availability statements, or supplementary materials included in this article.

Supplementary Materials

Crystal structure: contains datablocks global, I. DOI: 10.1107/S1600536811009561/fj2405sup1.cif

e-67-0o906-sup1.cif (18.9KB, cif)

Structure factors: contains datablocks I. DOI: 10.1107/S1600536811009561/fj2405Isup2.hkl

e-67-0o906-Isup2.hkl (91.2KB, hkl)

Additional supplementary materials: crystallographic information; 3D view; checkCIF report


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