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Acta Crystallographica Section E: Structure Reports Online logoLink to Acta Crystallographica Section E: Structure Reports Online
. 2011 Mar 2;67(Pt 4):o750. doi: 10.1107/S1600536811005903

3-Fluoro-4-nitro­phenyl 4-methyl­benzene­sulfonate

Wei Ang a, You-Fu Luo b, Yong Deng a,*
PMCID: PMC3099963  PMID: 21754047

Abstract

In the title compound, C13H10FNO5S, the dihedral angle between the benzene rings is 47.63 (14)°. In the crystal, π–π stacking occurs between nearly parallel benzene rings of adjacent mol­ecules, the centroid–centroid distance being 3.7806 (16) Å. Weak inter­molecular C—H⋯O hydrogen bonding is also present in the crystal structure.

Related literature

For related compounds and their biological activity, see: Cho et al. (2003); Marson et al. (2007).graphic file with name e-67-0o750-scheme1.jpg

Experimental

Crystal data

  • C13H10FNO5S

  • M r = 311.28

  • Orthorhombic, Inline graphic

  • a = 14.2596 (5) Å

  • b = 11.4800 (3) Å

  • c = 8.3602 (2) Å

  • V = 1368.57 (7) Å3

  • Z = 4

  • Mo Kα radiation

  • μ = 0.27 mm−1

  • T = 293 K

  • 0.30 × 0.30 × 0.20 mm

Data collection

  • Oxford Diffraction Xcalibur Eos diffractometer

  • Absorption correction: multi-scan (CrysAlis PRO; Oxford Diffraction, 2006) T min = 0.979, T max = 1.0

  • 10802 measured reflections

  • 2251 independent reflections

  • 1855 reflections with I > 2σ(I)

  • R int = 0.025

Refinement

  • R[F 2 > 2σ(F 2)] = 0.034

  • wR(F 2) = 0.083

  • S = 1.05

  • 2251 reflections

  • 191 parameters

  • 1 restraint

  • H-atom parameters constrained

  • Δρmax = 0.12 e Å−3

  • Δρmin = −0.23 e Å−3

  • Absolute structure: Flack (1983), 752 Friedel pairs

  • Flack parameter: −0.06 (9)

Data collection: CrysAlis PRO (Oxford Diffraction, 2006); cell refinement: CrysAlis PRO; data reduction: CrysAlis PRO; program(s) used to solve structure: SHELXTL (Sheldrick, 2008); program(s) used to refine structure: SHELXTL; molecular graphics: OLEX2 (Dolomanov et al., 2009); software used to prepare material for publication: OLEX2.

Supplementary Material

Crystal structure: contains datablocks I, global. DOI: 10.1107/S1600536811005903/xu5126sup1.cif

e-67-0o750-sup1.cif (16.4KB, cif)

Structure factors: contains datablocks I. DOI: 10.1107/S1600536811005903/xu5126Isup2.hkl

e-67-0o750-Isup2.hkl (110.7KB, hkl)

Additional supplementary materials: crystallographic information; 3D view; checkCIF report

Table 1. Hydrogen-bond geometry (Å, °).

D—H⋯A D—H H⋯A DA D—H⋯A
C6—H6⋯O2i 0.93 2.55 3.224 (4) 129

Symmetry code: (i) Inline graphic.

Acknowledgments

We thank the Analytical and Testing Center of Sichuan University for the X-ray measurements.

supplementary crystallographic information

Comment

Aryloxyalkanoic acid hydroxyamides are potent inhibitors of histone deacetylase (Marson et al., 2007; Cho et al., 2003). 3-Fluoro-4-nitrophenyl 4-methylbenzenesulfonate is one of the key intermediates to synthesize the aryloxyalkanoic acid hydroxyamides derivatives. We report here its crystal structure. In the title compound (Fig. 1), the dihedral angle between the 3-fluoro-4-nitrophenyl ring and the 4-methylbenzene ring is 47.63 (14)°. In the crystal, intermolecular π-π stacking [centroid–centroid distance = 3.7806 (16) Å] stabilizes the structure (Fig. 2). Weak C—H···O hydrogen bonding is present in the crystal structure (Table 1).

Experimental

To the 3-fluoro-4-nitrophenol (19.10 mmol) in chloroform (20 ml) at 273 K were added pyridine (3.70 ml, 45.84 mmol) dropwise over a period of 20 min and p-toluenesulfonyl chloride (22.92 mmol) in small portions. This reaction mixture was stirred at room temperature for 12 h and diluted with dichloromethane and then 10% aqueous HCl. The separated organic layer was washed with 10% aqueous HCl, water and saturated aqueous NaCl; dried over NaSO4; and concentrated in vacuo. The crude 3-fluoro-4-nitrophenyl 4-methylbenzenesulfonate were purified by recrystallization. Crystals suitable for X-ray analysis were obtained by slow evaporation from a solution of ethanol.

Refinement

H atoms were positioned geometrically and refined using a riding model with C—H = 0.93 Å and Uiso(H) = 1.2Ueq(C) for aromatic H atoms and C—H = 0.96 Å and Uiso(H) = 1.5Ueq(C) for methyl H atoms.

Figures

Fig. 1.

Fig. 1.

The molecular structure of the title compound, with displacement ellipsoids drawn at the 30% probability level.

Fig. 2.

Fig. 2.

The cell packing of the title compound.

Crystal data

C13H10FNO5S F(000) = 640
Mr = 311.28 Dx = 1.511 Mg m3
Orthorhombic, Pna21 Mo Kα radiation, λ = 0.7107 Å
Hall symbol: P 2c -2n Cell parameters from 4234 reflections
a = 14.2596 (5) Å θ = 2.9–29.1°
b = 11.4800 (3) Å µ = 0.27 mm1
c = 8.3602 (2) Å T = 293 K
V = 1368.57 (7) Å3 Block, colorless
Z = 4 0.30 × 0.30 × 0.20 mm

Data collection

Oxford Diffraction Xcalibur Eos diffractometer 2251 independent reflections
Radiation source: fine-focus sealed tube 1855 reflections with I > 2σ(I)
graphite Rint = 0.025
Detector resolution: 16.0874 pixels mm-1 θmax = 26.4°, θmin = 2.9°
ω scans h = −17→17
Absorption correction: multi-scan (CrysAlis PRO; Oxford Diffraction, 2006) k = −14→14
Tmin = 0.979, Tmax = 1.0 l = −7→10
10802 measured reflections

Refinement

Refinement on F2 Secondary atom site location: difference Fourier map
Least-squares matrix: full Hydrogen site location: inferred from neighbouring sites
R[F2 > 2σ(F2)] = 0.034 H-atom parameters constrained
wR(F2) = 0.083 w = 1/[σ2(Fo2) + (0.039P)2 + 0.1799P] where P = (Fo2 + 2Fc2)/3
S = 1.05 (Δ/σ)max = 0.025
2251 reflections Δρmax = 0.12 e Å3
191 parameters Δρmin = −0.22 e Å3
1 restraint Absolute structure: Flack (1983), 752 Friedel pairs
Primary atom site location: structure-invariant direct methods Flack parameter: −0.06 (9)

Special details

Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.

Fractional atomic coordinates and isotropic or equivalent isotropic displacement parameters (Å2)

x y z Uiso*/Ueq
S1 0.16636 (4) 0.27076 (5) 0.58998 (10) 0.05567 (19)
F1 0.34171 (15) −0.14722 (14) 0.6292 (3) 0.1007 (7)
O1 0.56870 (17) −0.0441 (2) 0.8899 (4) 0.0906 (8)
O2 0.51366 (19) −0.1649 (2) 0.7187 (3) 0.1041 (9)
O3 0.18775 (13) 0.20401 (17) 0.7566 (2) 0.0574 (5)
O4 0.16341 (14) 0.18606 (19) 0.4665 (3) 0.0675 (6)
O5 0.08578 (12) 0.33777 (18) 0.6260 (3) 0.0788 (7)
N1 0.5080 (2) −0.0778 (2) 0.7989 (3) 0.0675 (7)
C1 0.4217 (2) −0.0077 (2) 0.7863 (4) 0.0523 (7)
C2 0.3442 (2) −0.0442 (2) 0.7026 (4) 0.0601 (8)
C3 0.2660 (2) 0.0248 (2) 0.6906 (4) 0.0580 (7)
H3 0.2136 −0.0003 0.6341 0.070*
C4 0.26682 (18) 0.1317 (2) 0.7636 (3) 0.0474 (6)
C5 0.3427 (2) 0.1698 (2) 0.8491 (4) 0.0548 (7)
H5 0.3417 0.2424 0.8987 0.066*
C6 0.4204 (2) 0.0995 (2) 0.8609 (4) 0.0566 (7)
H6 0.4722 0.1243 0.9192 0.068*
C7 0.26414 (17) 0.3597 (2) 0.5642 (3) 0.0468 (6)
C8 0.33831 (18) 0.3209 (2) 0.4704 (4) 0.0532 (7)
H8 0.3359 0.2483 0.4213 0.064*
C9 0.41530 (18) 0.3917 (2) 0.4512 (4) 0.0538 (7)
H9 0.4659 0.3650 0.3914 0.065*
C10 0.41940 (19) 0.5008 (2) 0.5179 (3) 0.0519 (7)
C11 0.34570 (19) 0.5373 (2) 0.6128 (4) 0.0584 (7)
H11 0.3483 0.6103 0.6609 0.070*
C12 0.26858 (19) 0.4679 (2) 0.6375 (3) 0.0551 (7)
H12 0.2198 0.4931 0.7028 0.066*
C13 0.5028 (2) 0.5786 (3) 0.4867 (5) 0.0752 (9)
H13A 0.4860 0.6370 0.4096 0.113*
H13B 0.5537 0.5327 0.4460 0.113*
H13C 0.5215 0.6155 0.5847 0.113*

Atomic displacement parameters (Å2)

U11 U22 U33 U12 U13 U23
S1 0.0420 (3) 0.0668 (4) 0.0582 (4) 0.0045 (3) −0.0005 (4) 0.0083 (4)
F1 0.1299 (17) 0.0508 (9) 0.1214 (18) 0.0063 (10) −0.0321 (16) −0.0197 (11)
O1 0.0640 (15) 0.0999 (18) 0.108 (2) 0.0104 (14) −0.0161 (15) 0.0259 (17)
O2 0.135 (2) 0.0934 (17) 0.0836 (18) 0.0580 (16) −0.0025 (17) −0.0028 (15)
O3 0.0489 (11) 0.0689 (12) 0.0543 (12) 0.0047 (9) 0.0104 (10) 0.0087 (10)
O4 0.0635 (14) 0.0765 (13) 0.0625 (13) −0.0099 (10) −0.0104 (11) −0.0038 (11)
O5 0.0452 (11) 0.0901 (14) 0.1011 (19) 0.0158 (9) 0.0081 (13) 0.0152 (14)
N1 0.0737 (19) 0.0709 (17) 0.0579 (17) 0.0151 (14) 0.0075 (15) 0.0231 (15)
C1 0.0533 (18) 0.0547 (16) 0.0487 (17) 0.0054 (12) 0.0020 (14) 0.0132 (14)
C2 0.078 (2) 0.0415 (14) 0.0605 (19) −0.0031 (14) −0.0059 (17) 0.0043 (14)
C3 0.0585 (17) 0.0529 (15) 0.0627 (19) −0.0129 (13) −0.0115 (15) 0.0035 (14)
C4 0.0457 (14) 0.0534 (14) 0.0430 (15) −0.0017 (11) 0.0040 (13) 0.0085 (12)
C5 0.0580 (17) 0.0520 (15) 0.0543 (17) −0.0027 (13) −0.0022 (15) 0.0005 (13)
C6 0.0557 (18) 0.0606 (17) 0.0534 (18) −0.0076 (14) −0.0060 (15) 0.0069 (14)
C7 0.0431 (13) 0.0520 (13) 0.0453 (17) 0.0104 (10) 0.0012 (13) 0.0046 (13)
C8 0.0524 (16) 0.0467 (13) 0.0604 (17) 0.0088 (12) 0.0042 (15) −0.0067 (13)
C9 0.0453 (15) 0.0563 (16) 0.0597 (18) 0.0090 (12) 0.0078 (14) −0.0005 (14)
C10 0.0506 (16) 0.0555 (16) 0.0497 (17) 0.0051 (12) −0.0056 (13) 0.0021 (12)
C11 0.0692 (18) 0.0491 (13) 0.0568 (18) 0.0042 (12) −0.0026 (18) −0.0081 (14)
C12 0.0601 (17) 0.0582 (15) 0.0471 (17) 0.0176 (12) 0.0093 (14) −0.0015 (13)
C13 0.069 (2) 0.0714 (19) 0.085 (2) −0.0119 (15) 0.001 (2) −0.0069 (18)

Geometric parameters (Å, °)

S1—O3 1.619 (2) C5—C6 1.374 (4)
S1—O4 1.419 (2) C6—H6 0.9300
S1—O5 1.4152 (19) C7—C8 1.390 (4)
S1—C7 1.741 (3) C7—C12 1.386 (3)
F1—C2 1.332 (3) C8—H8 0.9300
O1—N1 1.216 (4) C8—C9 1.375 (3)
O2—N1 1.206 (3) C9—H9 0.9300
O3—C4 1.401 (3) C9—C10 1.373 (4)
N1—C1 1.475 (4) C10—C11 1.382 (4)
C1—C2 1.374 (4) C10—C13 1.509 (4)
C1—C6 1.380 (4) C11—H11 0.9300
C2—C3 1.372 (4) C11—C12 1.374 (4)
C3—H3 0.9300 C12—H12 0.9300
C3—C4 1.371 (4) C13—H13A 0.9600
C4—C5 1.369 (4) C13—H13B 0.9600
C5—H5 0.9300 C13—H13C 0.9600
F1—C2—C1 121.8 (3) C6—C1—N1 117.8 (3)
F1—C2—C3 117.2 (3) C6—C5—H5 120.4
O1—N1—C1 117.7 (3) C7—C8—H8 120.5
O2—N1—O1 124.3 (3) C7—C12—H12 120.3
O2—N1—C1 118.0 (3) C8—C7—S1 119.45 (19)
O3—S1—C7 103.48 (11) C8—C9—H9 119.1
O4—S1—O3 107.89 (11) C9—C8—C7 119.0 (2)
O4—S1—C7 109.59 (13) C9—C8—H8 120.5
O5—S1—O3 103.14 (14) C9—C10—C11 118.5 (2)
O5—S1—O4 120.23 (14) C9—C10—C13 120.2 (3)
O5—S1—C7 110.97 (11) C10—C9—C8 121.7 (2)
C1—C6—H6 119.9 C10—C9—H9 119.1
C2—C1—N1 122.7 (3) C10—C11—H11 119.4
C2—C1—C6 119.5 (3) C10—C13—H13A 109.5
C2—C3—H3 120.7 C10—C13—H13B 109.5
C3—C2—C1 121.0 (3) C10—C13—H13C 109.5
C3—C4—O3 120.3 (2) C11—C10—C13 121.3 (3)
C4—O3—S1 117.93 (16) C11—C12—C7 119.3 (2)
C4—C3—C2 118.6 (3) C11—C12—H12 120.3
C4—C3—H3 120.7 C12—C7—S1 120.46 (19)
C4—C5—H5 120.4 C12—C7—C8 120.1 (2)
C4—C5—C6 119.1 (3) C12—C11—C10 121.3 (2)
C5—C4—O3 118.0 (2) C12—C11—H11 119.4
C5—C4—C3 121.7 (2) H13A—C13—H13B 109.5
C5—C6—C1 120.2 (3) H13A—C13—H13C 109.5
C5—C6—H6 119.9 H13B—C13—H13C 109.5

Hydrogen-bond geometry (Å, °)

D—H···A D—H H···A D···A D—H···A
C6—H6···O2i 0.93 2.55 3.224 (4) 129

Symmetry codes: (i) −x+1, −y, z+1/2.

Footnotes

Supplementary data and figures for this paper are available from the IUCr electronic archives (Reference: XU5126).

References

  1. Cho, C. H., Yun, H. S. & Park, K. Y. (2003). J. Org. Chem. 68, 3017–3025. [DOI] [PubMed]
  2. Dolomanov, O. V., Bourhis, L. J., Gildea, R. J., Howard, J. A. K. & Puschmann, H. (2009). J. Appl. Cryst. 42, 339–341.
  3. Flack, H. D. (1983). Acta Cryst. A39, 876–881.
  4. Marson, C. M., Mahadevan, T., Dines, J., Sengmany, S., Morrel, J. M., Alao, J. P., Joel, S. P., Vigushin, D. M. & Coombes, R. C. (2007). Bioorg. Med. Chem. Lett. 17, 136–141. [DOI] [PubMed]
  5. Oxford Diffraction (2006). CrysAlis PRO Oxford Diffraction Ltd, Abingdon, England.
  6. Sheldrick, G. M. (2008). Acta Cryst. A64, 112–122. [DOI] [PubMed]

Associated Data

This section collects any data citations, data availability statements, or supplementary materials included in this article.

Supplementary Materials

Crystal structure: contains datablocks I, global. DOI: 10.1107/S1600536811005903/xu5126sup1.cif

e-67-0o750-sup1.cif (16.4KB, cif)

Structure factors: contains datablocks I. DOI: 10.1107/S1600536811005903/xu5126Isup2.hkl

e-67-0o750-Isup2.hkl (110.7KB, hkl)

Additional supplementary materials: crystallographic information; 3D view; checkCIF report


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