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. 2011 Apr 14;27(12):1660–1666. doi: 10.1093/bioinformatics/btr188

Table 2.

The maximum F1 scores of each peak alignment method for Dataset I and II

Dataset Method k ρ (w) Distance F1 95% CI of F1
I PAD Canberra 0.9652 (0.9600–0.9704)
PAS 0.9023 (0.8888–0.9157)
DW-PAS 3 Euclidean 0.9618 (0.9546–0.9690)
SW-PAD 0.5 Canberra 0.9766 (0.9716–0.9817)
PAM 0.5 Canberra 0.9810 (0.9771–0.9849)

II PAD Manhattan 0.4729 (0.4382–0.5076)
PAS 0.6109 (0.5908–0.6310)
DW-PAS 15 Canberra 0.5932 (0.5716–0.6149)
SW-PAD 0.93 Manhattan 0.5954 (0.5687–0.6221)
PAM 0.05 Manhattana 0.6148 (0.5945–0.6351)

aEuclidean and Maximum have the same F1 value as that of Manhattan.