Abstract
The asymmetric unit of the title compound, C18H22Br2N2O2, contains one half-molecule that is related to the other half by a center of inversion located at the mid-point of the central C—C bond. The hydroxy (phenolic) groups are linked to the N atoms by O—H⋯N hydrogen bonds, which generate S(6) rings.
Related literature
For the synthesis, see: Rivera et al. (2010 ▶). For the uses of tetrahydrosalens in coordination chemistry, see: Atwood (1997 ▶). For a related structure, see: Nazarenko et al. (2000 ▶). For reference bond lenghts, see: Allen et al. (1987 ▶).
Experimental
Crystal data
C18H22Br2N2O2
M r = 458.2
Orthorhombic,
a = 15.9282 (3) Å
b = 6.1123 (2) Å
c = 18.3315 (4) Å
V = 1784.72 (8) Å3
Z = 4
Cu Kα radiation
μ = 5.87 mm−1
T = 120 K
0.36 × 0.06 × 0.05 mm
Data collection
Oxford Diffraction Xcalibur diffractometer with an Atlas (Gemini ultra Cu) detector
Absorption correction: multi-scan (CrysAlis PRO; Oxford Diffraction, 2009 ▶) T min = 0.611, T max = 1
24526 measured reflections
1591 independent reflections
1482 reflections with I > 3σ(I)
R int = 0.028
Refinement
R[F 2 > 2σ(F 2)] = 0.021
wR(F 2) = 0.075
S = 1.52
1591 reflections
112 parameters
H atoms treated by a mixture of independent and constrained refinement
Δρmax = 0.20 e Å−3
Δρmin = −0.32 e Å−3
Data collection: CrysAlis PRO (Oxford Diffraction, 2009 ▶); cell refinement: CrysAlis PRO; data reduction: CrysAlis PRO; program(s) used to solve structure: SIR2002 (Burla et al., 2003 ▶); program(s) used to refine structure: JANA2006 (Petříček et al., 2006 ▶); molecular graphics: DIAMOND (Brandenburg & Putz, 2005 ▶); software used to prepare material for publication: JANA2006.
Supplementary Material
Crystal structure: contains datablocks global, I. DOI: 10.1107/S1600536811017193/hb5874sup1.cif
Structure factors: contains datablocks I. DOI: 10.1107/S1600536811017193/hb5874Isup2.hkl
Additional supplementary materials: crystallographic information; 3D view; checkCIF report
Table 1. Hydrogen-bond geometry (Å, °).
| D—H⋯A | D—H | H⋯A | D⋯A | D—H⋯A |
|---|---|---|---|---|
| O4—H4o⋯N2 | 0.81 (2) | 1.86 (2) | 2.6051 (19) | 154 (2) |
Acknowledgments
We acknowledge the Dirección de Investigaciones Sede Bogotá (DIB) of the Universidad Nacional de Colombia for financial support and the Institutional research plan No. AVOZ10100521 of the Institute of Physics and the Praemium Academiae project of the Academy of Sciences of the Czech Republic.
supplementary crystallographic information
Comment
Recently, we reported the synthesis of a new class of ligands by a ring-opening reduction of bis-1,3-benzoxazines with sodium borohydride (Rivera et al., 2010), and the products of these reactions are referred to as N,N'-disubstituted tetrahydro-salens (Atwood, 1997). Here we report the crystal structure of title compound (I). The C(sp3)—X bond distances and angles in (I) are within normal ranges (Allen et al., 1987) and comparable with a related structure (Nazarenko, et al., 2000). The C—N bonds in the N—CH2CH2—N segment are anti to each other, with a torsion angle of 180°. The observed conformation is stabilized by the short intramolecular hydrogen bonds O—H··· N (Table 1), and these interactions generate S(6) ring motifs.
Experimental
Sodium borohydride (3.0 mmol, 0.11 g) was added to a solution of 3,3'-ethylene-bis-(3,4-dihydro-6-bromo-2H-1,3-benzoxazine) (1 mmol) in ethanol (15 ml), and the mixture was stirred magnetically for 30 min at room temperature. After completion of the reaction, the mixture was poured into ice-cold water, neutralized with ammonium chloride (12 ml), and extracted with CHCl3 (3 times 10 cm3). The combined extracts were dried over anhydrous Na2SO4 and evaporated. The solid obtained was purified by recrystallization from ethanol to yield colourless needles of (I).
Refinement
All hydrogen atoms were discernible in difference Fourier maps and could be refined to reasonable geometry. According to common practice H atoms bonded C atoms were kept in ideal positions with C–H distance 0.96 Å during the refinement. The methyl H atoms were allowed to rotate freely about the adjacent C—C bonds. The hydroxy hydrogen was found in difference Fourier maps and its coordinates were refined freely. The isotropic atomic displacement parameters of hydrogen atoms were evaluated as 1.2×Ueq of the parent atom.
Figures
Fig. 1.
The molecule of the title compound. Displacement ellipsoids are drawn at 50% probability level. Atoms with suffix i are generated by the symmetry operation (1–x, –y, 2–z).
Fig. 2.
The packing for (I).
Crystal data
| C18H22Br2N2O2 | F(000) = 920 |
| Mr = 458.2 | Dx = 1.705 Mg m−3 |
| Orthorhombic, Pbca | Cu Kα radiation, λ = 1.5418 Å |
| Hall symbol: -P 2ac 2ab | Cell parameters from 16599 reflections |
| a = 15.9282 (3) Å | θ = 2.8–66.9° |
| b = 6.1123 (2) Å | µ = 5.87 mm−1 |
| c = 18.3315 (4) Å | T = 120 K |
| V = 1784.72 (8) Å3 | Needle, colourless |
| Z = 4 | 0.36 × 0.06 × 0.05 mm |
Data collection
| Oxford Diffraction Xcalibur diffractometer with an Atlas (Gemini ultra Cu) detector | 1591 independent reflections |
| Radiation source: Enhance Ultra (Cu) X-ray Source | 1482 reflections with I > 3σ(I) |
| mirror | Rint = 0.028 |
| Detector resolution: 10.3784 pixels mm-1 | θmax = 67.1°, θmin = 4.8° |
| Rotation method data acquisition using ω scans | h = −18→18 |
| Absorption correction: multi-scan (CrysAlis PRO; Oxford Diffraction, 2009) | k = −7→7 |
| Tmin = 0.611, Tmax = 1 | l = −21→21 |
| 24526 measured reflections |
Refinement
| Refinement on F2 | 41 constraints |
| R[F2 > 2σ(F2)] = 0.021 | H atoms treated by a mixture of independent and constrained refinement |
| wR(F2) = 0.075 | Weighting scheme based on measured s.u.'s w = 1/[σ2(I) + 0.0016I2] |
| S = 1.52 | (Δ/σ)max = 0.008 |
| 1591 reflections | Δρmax = 0.20 e Å−3 |
| 112 parameters | Δρmin = −0.32 e Å−3 |
| 0 restraints |
Special details
| Experimental. CrysAlisPro, Oxford Diffraction (2009), Empirical absorption correction using spherical harmonics, implemented in SCALE3 ABSPACK scaling algorithm. |
| Refinement. The refinement was carried out against all reflections. The conventional R-factor is always based on F. The goodness of fit as well as the weighted R-factor are based on F and F2 for refinement carried out on F and F2, respectively. The threshold expression is used only for calculating R-factors etc. and it is not relevant to the choice of reflections for refinement.The program used for refinement, Jana2006, uses the weighting scheme based on the experimental expectations, see _refine_ls_weighting_details, that does not force S to be one. Therefore the values of S are usually larger than the ones from the SHELX program. |
Fractional atomic coordinates and isotropic or equivalent isotropic displacement parameters (Å2)
| x | y | z | Uiso*/Ueq | ||
| Br1 | 0.640851 (13) | 0.05571 (4) | 0.580303 (11) | 0.03125 (11) | |
| O4 | 0.61560 (9) | 0.4268 (2) | 0.88393 (7) | 0.0270 (4) | |
| N2 | 0.58909 (9) | 0.0319 (2) | 0.93218 (8) | 0.0195 (4) | |
| C1 | 0.59115 (9) | 0.1285 (3) | 0.80150 (9) | 0.0202 (4) | |
| C2 | 0.62193 (10) | 0.3384 (3) | 0.81629 (9) | 0.0214 (5) | |
| C3 | 0.66038 (12) | 0.4593 (3) | 0.76131 (11) | 0.0242 (5) | |
| C4 | 0.66647 (10) | 0.3757 (3) | 0.69103 (9) | 0.0251 (5) | |
| C5 | 0.63443 (9) | 0.1714 (3) | 0.67664 (10) | 0.0227 (5) | |
| C6 | 0.59736 (10) | 0.0460 (3) | 0.73124 (10) | 0.0217 (5) | |
| C7 | 0.54916 (10) | −0.0057 (3) | 0.86063 (9) | 0.0216 (4) | |
| C8 | 0.53980 (10) | −0.0646 (3) | 0.99219 (9) | 0.0218 (5) | |
| C9 | 0.67487 (11) | −0.0584 (3) | 0.93342 (10) | 0.0241 (5) | |
| H3 | 0.682855 | 0.601479 | 0.77203 | 0.0291* | |
| H4 | 0.692687 | 0.459508 | 0.65304 | 0.0301* | |
| H6 | 0.576136 | −0.09726 | 0.720273 | 0.026* | |
| H7a | 0.490778 | 0.032417 | 0.863354 | 0.0259* | |
| H7b | 0.552676 | −0.158184 | 0.848428 | 0.0259* | |
| H8a | 0.573654 | −0.070797 | 1.035465 | 0.0262* | |
| H8b | 0.525375 | −0.212723 | 0.980158 | 0.0262* | |
| H9a | 0.701148 | −0.023134 | 0.97905 | 0.0289* | |
| H9b | 0.672436 | −0.214496 | 0.927867 | 0.0289* | |
| H9c | 0.706892 | 0.003417 | 0.894138 | 0.0289* | |
| H4o | 0.6031 (15) | 0.326 (4) | 0.9104 (12) | 0.0323* |
Atomic displacement parameters (Å2)
| U11 | U22 | U33 | U12 | U13 | U23 | |
| Br1 | 0.03214 (19) | 0.0431 (2) | 0.01850 (19) | 0.00457 (7) | −0.00120 (6) | −0.00091 (7) |
| O4 | 0.0343 (7) | 0.0206 (6) | 0.0260 (7) | −0.0033 (5) | 0.0042 (5) | −0.0036 (5) |
| N2 | 0.0153 (7) | 0.0236 (8) | 0.0195 (7) | −0.0017 (5) | 0.0009 (5) | 0.0002 (5) |
| C1 | 0.0144 (7) | 0.0228 (8) | 0.0235 (8) | 0.0010 (6) | −0.0004 (6) | 0.0020 (7) |
| C2 | 0.0172 (7) | 0.0228 (8) | 0.0243 (8) | 0.0015 (6) | −0.0011 (6) | 0.0006 (7) |
| C3 | 0.0210 (8) | 0.0226 (9) | 0.0291 (10) | −0.0022 (6) | −0.0008 (7) | 0.0037 (6) |
| C4 | 0.0180 (8) | 0.0298 (9) | 0.0276 (9) | −0.0002 (7) | −0.0002 (6) | 0.0075 (7) |
| C5 | 0.0181 (8) | 0.0314 (10) | 0.0185 (8) | 0.0044 (6) | −0.0013 (5) | 0.0004 (7) |
| C6 | 0.0190 (8) | 0.0228 (9) | 0.0232 (9) | 0.0018 (6) | −0.0032 (6) | 0.0008 (6) |
| C7 | 0.0194 (8) | 0.0244 (8) | 0.0210 (8) | −0.0042 (7) | −0.0012 (6) | 0.0005 (7) |
| C8 | 0.0189 (8) | 0.0251 (9) | 0.0214 (8) | −0.0012 (6) | 0.0012 (6) | 0.0036 (6) |
| C9 | 0.0163 (9) | 0.0289 (10) | 0.0271 (8) | 0.0019 (6) | 0.0000 (7) | 0.0004 (6) |
Geometric parameters (Å, °)
| Br1—C5 | 1.9051 (18) | C4—H4 | 0.96 |
| O4—H4o | 0.81 (2) | C5—C6 | 1.392 (2) |
| N2—C7 | 1.476 (2) | C6—H6 | 0.96 |
| N2—C8 | 1.475 (2) | C7—H7a | 0.96 |
| N2—C9 | 1.474 (2) | C7—H7b | 0.96 |
| C1—C2 | 1.400 (2) | C8—C8i | 1.521 (2) |
| C1—C6 | 1.387 (2) | C8—H8a | 0.96 |
| C1—C7 | 1.515 (2) | C8—H8b | 0.96 |
| C2—C3 | 1.392 (3) | C9—H9a | 0.96 |
| C3—C4 | 1.389 (3) | C9—H9b | 0.96 |
| C3—H3 | 0.96 | C9—H9c | 0.96 |
| C4—C5 | 1.375 (3) | ||
| C7—N2—C8 | 111.79 (13) | N2—C7—C1 | 111.17 (13) |
| C7—N2—C9 | 110.78 (13) | N2—C7—H7a | 109.4713 |
| C8—N2—C9 | 109.40 (13) | N2—C7—H7b | 109.4711 |
| C2—C1—C6 | 119.21 (15) | C1—C7—H7a | 109.4712 |
| C2—C1—C7 | 120.83 (14) | C1—C7—H7b | 109.4709 |
| C6—C1—C7 | 119.93 (15) | H7a—C7—H7b | 107.7191 |
| C1—C2—C3 | 120.04 (16) | N2—C8—C8i | 112.14 (13) |
| C2—C3—C4 | 120.46 (16) | N2—C8—H8a | 109.4713 |
| C2—C3—H3 | 119.771 | N2—C8—H8b | 109.4716 |
| C4—C3—H3 | 119.7725 | C8i—C8—H8a | 109.4716 |
| C3—C4—C5 | 119.09 (16) | C8i—C8—H8b | 109.4707 |
| C3—C4—H4 | 120.4567 | H8a—C8—H8b | 106.6664 |
| C5—C4—H4 | 120.4562 | N2—C9—H9a | 109.4705 |
| Br1—C5—C4 | 119.68 (13) | N2—C9—H9b | 109.471 |
| Br1—C5—C6 | 119.00 (14) | N2—C9—H9c | 109.4718 |
| C4—C5—C6 | 121.31 (16) | H9a—C9—H9b | 109.4713 |
| C1—C6—C5 | 119.85 (16) | H9a—C9—H9c | 109.4714 |
| C1—C6—H6 | 120.0729 | H9b—C9—H9c | 109.4713 |
| C5—C6—H6 | 120.073 | ||
| N2—C8—C8i—N2i | 180 |
Symmetry codes: (i) −x+1, −y, −z+2.
Hydrogen-bond geometry (Å, °)
| D—H···A | D—H | H···A | D···A | D—H···A |
| O4—H4o···N2 | 0.81 (2) | 1.86 (2) | 2.6051 (19) | 154 (2) |
Footnotes
Supplementary data and figures for this paper are available from the IUCr electronic archives (Reference: HB5874).
References
- Allen, F. H., Kennard, O., Watson, D. G., Brammer, L., Orpen, A. G. & Taylor, R. (1987). J. Chem. Soc. Perkin Trans. 2, pp. S1–19.
- Atwood, D. A. (1997). Coord. Chem. Rev. 165, 267–296.
- Brandenburg, K. & Putz, H. (2005). DIAMOND Crystal Impact GbR, Bonn, Germany.
- Burla, M. C., Camalli, M., Carrozzini, B., Cascarano, G. L., Giacovazzo, C., Polidori, G. & Spagna, R. (2003). J. Appl. Cryst. 36, 1103.
- Nazarenko, A. Y., Dalley, N. K., Pastushok, V. N. & Bradshaw, J. S. (2000). Private communication (refcode QEYGAC). CCDC, Cambridge, England.
- Oxford Diffraction (2009). CrysAlis PRO Oxford Diffraction Ltd, Yarnton, England.
- Petříček, V., Dušek, M. & Palatinus, L. (2006). JANA2006 Institute of Physics, Praha, Czech Republic.
- Rivera, A., Rojas, J. J., Salazar-Barrios, J., Maldonado, M. & Ríos-Motta, J. (2010). Molecules, 15, 4102–4110. [DOI] [PMC free article] [PubMed]
Associated Data
This section collects any data citations, data availability statements, or supplementary materials included in this article.
Supplementary Materials
Crystal structure: contains datablocks global, I. DOI: 10.1107/S1600536811017193/hb5874sup1.cif
Structure factors: contains datablocks I. DOI: 10.1107/S1600536811017193/hb5874Isup2.hkl
Additional supplementary materials: crystallographic information; 3D view; checkCIF report


