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Acta Crystallographica Section E: Structure Reports Online logoLink to Acta Crystallographica Section E: Structure Reports Online
. 2011 May 7;67(Pt 6):o1292–o1293. doi: 10.1107/S160053681101587X

3,5-Bis(4-fluoro­phen­yl)-4,5-dihydro-1H-pyrazole-1-carbaldehyde

Zeliha Baktır a, Mehmet Akkurt a,*, S Samshuddin b, B Narayana b, H S Yathirajan c
PMCID: PMC3120319  PMID: 21754699

Abstract

In the title mol­ecule, C16H12F2N2O, the pyrazole ring adopts a slight envelope conformation with the methyl­ene C atom deviating by 0.114 (3) Å from the mean plane of the other four atoms [maximum deviation = 0.021 (3) Å]. The dihedral angles between the four essentially planar atoms of the pyrazole ring and the fluoro-substituted benzene rings are 2.6 (2) and 82.2 (2)°. The dihedral angle between the two benzene rings is 83.7 (2)°. The crystal packing is stabilized by weak inter­molecular C—H⋯O hydrogen bonds.

Related literature

For the biological activity of pyrazolines, see: Hes et al. (1978); Manna et al. (2005); Amir et al. (2008); Regaila et al. (1979); Sarojini et al. (2010). For their importance in organic synthesis, see: Bhaskarreddy et al. (1997); Klimova et al. (1999). For related structures, see: Butcher et al. (2007); Cui & Li (2010); Fun et al. (2010a ,b ); Jasinski et al. (2010a ,b ); Baktır et al. (2011).graphic file with name e-67-o1292-scheme1.jpg

Experimental

Crystal data

  • C16H12F2N2O

  • M r = 286.28

  • Triclinic, Inline graphic

  • a = 6.2141 (9) Å

  • b = 6.7802 (8) Å

  • c = 17.9857 (9) Å

  • α = 96.727 (4)°

  • β = 90.254 (4)°

  • γ = 116.791 (5)°

  • V = 670.39 (13) Å3

  • Z = 2

  • Mo Kα radiation

  • μ = 0.11 mm−1

  • T = 294 K

  • 0.30 × 0.20 × 0.10 mm

Data collection

  • Rigaku R-AXIS RAPID-S diffractometer

  • Absorption correction: multi-scan (Blessing, 1995) T min = 0.968, T max = 0.989

  • 14070 measured reflections

  • 2736 independent reflections

  • 1011 reflections with I > 2σ(I)

  • R int = 0.095

Refinement

  • R[F 2 > 2σ(F 2)] = 0.062

  • wR(F 2) = 0.206

  • S = 0.94

  • 2736 reflections

  • 191 parameters

  • H-atom parameters constrained

  • Δρmax = 0.19 e Å−3

  • Δρmin = −0.33 e Å−3

Data collection: CrystalClear (Rigaku/MSC, 2005); cell refinement: CrystalClear; data reduction: CrystalClear; program(s) used to solve structure: SIR97 (Altomare et al., 1999); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: PLATON (Spek, 2009); software used to prepare material for publication: WinGX (Farrugia, 1999).

Supplementary Material

Crystal structure: contains datablocks global, I. DOI: 10.1107/S160053681101587X/lh5239sup1.cif

e-67-o1292-sup1.cif (18.2KB, cif)

Structure factors: contains datablocks I. DOI: 10.1107/S160053681101587X/lh5239Isup2.hkl

e-67-o1292-Isup2.hkl (134.3KB, hkl)

Supplementary material file. DOI: 10.1107/S160053681101587X/lh5239Isup3.cml

Additional supplementary materials: crystallographic information; 3D view; checkCIF report

Table 1. Hydrogen-bond geometry (Å, °).

D—H⋯A D—H H⋯A DA D—H⋯A
C4—H4⋯O1i 0.93 2.50 3.421 (5) 171
C11—H11⋯O1ii 0.93 2.39 3.296 (5) 165

Symmetry codes: (i) Inline graphic; (ii) Inline graphic.

Acknowledgments

ZB and MA thank the Unit of the Scientific Research Projects of Erciyes University, Turkey, for the research grant FBD-10–2949, and for support of the data collection at Atatürk University, Turkey. SS and BN thank Mangalore University and the UGC SAP for financial assistance for the purchase of chemicals. HSY thanks the UOM for sabbatical leave.

supplementary crystallographic information

Comment

Pyrazolines have been reported to exhibit a broad spectrum of biological activies such as antitumor, antibacterial, antifungal, antiviral, antiparasitic, anti-tubercular and insecticidal activities (Hes et al., 1978; Manna et al., 2005; Amir et al., 2008). Some of these compounds have also antioxidant, anti-diabetic, anaesthetic and analgesic properties (Sarojini et al., 2010; Regaila et al., 1979). In addition, pyrazolines have played a crucial part in the development of theory in heterocyclic chemistry and also used extensively in organic synthesis (Klimova et al., 1999 and Bhaskarreddy et al., 1997).

The crystal structure of some pyrazoline derivatives viz., 3-(4-methylphenyl)-5-[4-(methylthio)phenyl]-4,5-dihydro-1H-pyrazole-1-carbaldehyde (Butcher et al., 2007) and 5-(2-hydroxyphenyl)-3-methyl-4,5-dihydro-1H-pyrazole-1-carbaldehyde (Cui & Li, 2010) have been reported. In view of the importance of pyrazoline derivatives and in continuation of our work on synthesis of various derivatives of 4,4'-diflouro chalcone (Fun et al., 2010a,b; Jasinski et al., 2010a,b; Baktır et al., 2011), the title compound (I) is synthesized and its crystal structure is reported herein.

The molecular structure of the title compound is shown in Fig. 1. The pyrazole ring adopts a slight envelope comformation with the methylene C atom (C8) deviating by 0.114 (3)Å from the mean-plane of the other four atoms (C7/C9/N1/N2 with maximum deviation 0.021 (3)Å for N1). The dihedral angles between the four essentially planar atoms of the pyrazole ring and fluoro-substituted benzene rings are 2.6 (2) and 82.2 (2)°, respectively. The dihedral angle between the two benzene rings is 83.7 (2)°. The crystal packing is stabilized by weak intermolecular C—H···O hydrogen bonds (Fig .2).

Experimental

A mixture of (2E)-1,3-bis(4-fluorophenyl)prop-2-en-1-one (2.44 g, 0.01 mol) and hydrazine hydrate (0.5 ml, 0.01 mol) in 20 ml formic acid was refluxed for 8 h. The reaction mixture was cooled and poured into 50 ml ice-cold water. The precipitate was collected by filtration and purified by recrystallization from ethanol. The single-crystal was grown from DMF by slow evaporation method and yield of the compound was 86%. (m. p.: 408 K).

Refinement

All H atoms were positioned geometrically [C—H = 0.93 and 0.97 Å] and allowed to ride on their parent C atoms, with Uiso(H) = 1.2Ueq(C). Owing to the large number of weak high-angle reflections, the ratio of observed to unique reflections is low (37%).

Figures

Fig. 1.

Fig. 1.

The title molecule with displacement ellipsoids for non-H atoms are drawn at the 30% probability level.

Fig. 2.

Fig. 2.

Hydrogen bonding of the title compound viewed along the a axis. Hydrogen bonds are shown as dotted lines (symmetry code: (a) x-2, y-1, z).

Crystal data

C16H12F2N2O Z = 2
Mr = 286.28 F(000) = 296
Triclinic, P1 Dx = 1.418 Mg m3
Hall symbol: -P 1 Mo Kα radiation, λ = 0.71073 Å
a = 6.2141 (9) Å Cell parameters from 1748 reflections
b = 6.7802 (8) Å θ = 2.3–26.3°
c = 17.9857 (9) Å µ = 0.11 mm1
α = 96.727 (4)° T = 294 K
β = 90.254 (4)° Prism, pale yellow
γ = 116.791 (5)° 0.30 × 0.20 × 0.10 mm
V = 670.39 (13) Å3

Data collection

Rigaku R-AXIS RAPID-S diffractometer 2736 independent reflections
Radiation source: Sealed Tube 1011 reflections with I > 2σ(I)
Graphite Monochromator Rint = 0.095
Detector resolution: 10.0000 pixels mm-1 θmax = 26.5°, θmin = 3.4°
dtprofit.ref scans h = −7→7
Absorption correction: multi-scan (Blessing, 1995) k = −8→8
Tmin = 0.968, Tmax = 0.989 l = −22→22
14070 measured reflections

Refinement

Refinement on F2 Primary atom site location: structure-invariant direct methods
Least-squares matrix: full Secondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.062 Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.206 H-atom parameters constrained
S = 0.94 w = 1/[σ2(Fo2) + (0.0812P)2] where P = (Fo2 + 2Fc2)/3
2736 reflections (Δ/σ)max < 0.001
191 parameters Δρmax = 0.19 e Å3
0 restraints Δρmin = −0.33 e Å3

Special details

Geometry. Bond distances, angles etc. have been calculated using the rounded fractional coordinates. All su's are estimated from the variances of the (full) variance-covariance matrix. The cell e.s.d.'s are taken into account in the estimation of distances, angles and torsion angles
Refinement. Refinement on F2 for ALL reflections except those flagged by the user for potential systematic errors. Weighted R-factors wR and all goodnesses of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The observed criterion of F2 > σ(F2) is used only for calculating -R-factor-obs etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R-factors based on ALL data will be even larger.

Fractional atomic coordinates and isotropic or equivalent isotropic displacement parameters (Å2)

x y z Uiso*/Ueq
F1 −0.7910 (4) 0.0976 (4) 0.04914 (14) 0.1334 (11)
F2 0.7113 (5) 1.4342 (4) 0.49400 (14) 0.1284 (11)
O1 0.9124 (4) 0.8903 (4) 0.23729 (12) 0.0822 (9)
N1 0.3094 (4) 0.6264 (4) 0.16479 (13) 0.0621 (9)
N2 0.5069 (4) 0.7082 (4) 0.21640 (12) 0.0621 (9)
C1 −0.1494 (6) 0.4185 (7) 0.08534 (18) 0.1019 (16)
C2 −0.3750 (7) 0.3162 (8) 0.0481 (2) 0.120 (2)
C3 −0.5702 (6) 0.1944 (7) 0.0858 (2) 0.0937 (16)
C4 −0.5512 (6) 0.1715 (5) 0.1584 (2) 0.0798 (14)
C5 −0.3241 (6) 0.2737 (5) 0.19570 (18) 0.0718 (12)
C6 −0.1199 (5) 0.3980 (5) 0.15912 (16) 0.0643 (11)
C7 0.1190 (5) 0.5070 (5) 0.19872 (15) 0.0583 (11)
C8 0.1722 (5) 0.4922 (5) 0.27855 (16) 0.0728 (12)
C9 0.4427 (5) 0.6519 (5) 0.29283 (15) 0.0650 (11)
C10 0.5095 (5) 0.8590 (5) 0.34783 (15) 0.0637 (11)
C11 0.3760 (6) 0.9769 (6) 0.34948 (17) 0.0713 (11)
C12 0.4417 (7) 1.1706 (6) 0.39825 (19) 0.0820 (16)
C13 0.6424 (7) 1.2450 (6) 0.4449 (2) 0.0873 (16)
C14 0.7786 (7) 1.1343 (6) 0.44657 (19) 0.0870 (14)
C15 0.7124 (6) 0.9408 (6) 0.39679 (17) 0.0774 (14)
C16 0.7313 (6) 0.8185 (5) 0.19475 (18) 0.0696 (12)
H1 −0.01520 0.50270 0.06000 0.1230*
H2 −0.39330 0.33040 −0.00210 0.1440*
H4 −0.68760 0.08870 0.18310 0.0960*
H5 −0.30840 0.25880 0.24590 0.0860*
H8A 0.13880 0.34140 0.28510 0.0870*
H8B 0.07740 0.53940 0.31210 0.0870*
H9 0.52740 0.57050 0.30870 0.0780*
H11 0.23920 0.92430 0.31700 0.0850*
H12 0.35050 1.24820 0.39910 0.0990*
H14 0.91270 1.18720 0.48020 0.1040*
H15 0.80540 0.86500 0.39630 0.0930*
H16 0.75090 0.84190 0.14480 0.0830*

Atomic displacement parameters (Å2)

U11 U22 U33 U12 U13 U23
F1 0.0603 (14) 0.164 (2) 0.142 (2) 0.0304 (15) −0.0376 (13) −0.0172 (17)
F2 0.1089 (18) 0.1004 (17) 0.133 (2) 0.0232 (15) 0.0018 (15) −0.0407 (15)
O1 0.0474 (13) 0.0936 (18) 0.0902 (17) 0.0222 (13) −0.0112 (12) −0.0025 (13)
N1 0.0507 (15) 0.0728 (18) 0.0553 (14) 0.0242 (14) −0.0057 (12) −0.0030 (12)
N2 0.0451 (15) 0.0734 (18) 0.0576 (14) 0.0203 (14) −0.0060 (11) −0.0010 (12)
C1 0.059 (2) 0.159 (4) 0.061 (2) 0.027 (2) −0.0034 (17) 0.011 (2)
C2 0.070 (3) 0.187 (5) 0.074 (2) 0.037 (3) −0.015 (2) 0.001 (3)
C3 0.052 (2) 0.105 (3) 0.107 (3) 0.028 (2) −0.022 (2) −0.016 (2)
C4 0.051 (2) 0.072 (2) 0.104 (3) 0.0191 (18) −0.0005 (18) 0.004 (2)
C5 0.059 (2) 0.069 (2) 0.080 (2) 0.0242 (18) −0.0004 (17) 0.0038 (17)
C6 0.053 (2) 0.075 (2) 0.0613 (18) 0.0286 (18) −0.0030 (14) −0.0025 (15)
C7 0.0502 (19) 0.066 (2) 0.0554 (17) 0.0254 (16) 0.0004 (14) 0.0000 (14)
C8 0.063 (2) 0.074 (2) 0.068 (2) 0.0199 (18) −0.0071 (15) 0.0074 (16)
C9 0.061 (2) 0.070 (2) 0.0583 (17) 0.0253 (17) −0.0090 (14) 0.0073 (15)
C10 0.0568 (19) 0.072 (2) 0.0541 (17) 0.0232 (17) −0.0080 (14) 0.0042 (15)
C11 0.065 (2) 0.084 (2) 0.0618 (18) 0.032 (2) −0.0040 (15) 0.0066 (17)
C12 0.085 (3) 0.086 (3) 0.075 (2) 0.040 (2) 0.0065 (19) 0.0061 (19)
C13 0.082 (3) 0.077 (3) 0.080 (2) 0.022 (2) 0.002 (2) −0.0147 (19)
C14 0.069 (2) 0.095 (3) 0.078 (2) 0.026 (2) −0.0154 (18) −0.011 (2)
C15 0.064 (2) 0.091 (3) 0.066 (2) 0.029 (2) −0.0137 (16) −0.0044 (18)
C16 0.050 (2) 0.081 (2) 0.072 (2) 0.0268 (18) −0.0002 (16) 0.0009 (17)

Geometric parameters (Å, °)

F1—C3 1.352 (5) C10—C15 1.385 (5)
F2—C13 1.358 (4) C11—C12 1.380 (5)
O1—C16 1.225 (4) C12—C13 1.356 (6)
N1—N2 1.390 (4) C13—C14 1.363 (6)
N1—C7 1.299 (4) C14—C15 1.388 (5)
N2—C9 1.478 (4) C1—H1 0.9300
N2—C16 1.337 (5) C2—H2 0.9300
C1—C2 1.379 (6) C4—H4 0.9300
C1—C6 1.370 (4) C5—H5 0.9300
C2—C3 1.360 (6) C8—H8A 0.9700
C3—C4 1.344 (5) C8—H8B 0.9700
C4—C5 1.387 (5) C9—H9 0.9800
C5—C6 1.388 (5) C11—H11 0.9300
C6—C7 1.461 (5) C12—H12 0.9300
C7—C8 1.497 (4) C14—H14 0.9300
C8—C9 1.534 (5) C15—H15 0.9300
C9—C10 1.506 (4) C16—H16 0.9300
C10—C11 1.386 (5)
N2—N1—C7 107.5 (2) C13—C14—C15 118.4 (4)
N1—N2—C9 113.9 (2) C10—C15—C14 120.9 (4)
N1—N2—C16 120.5 (2) O1—C16—N2 123.4 (3)
C9—N2—C16 125.6 (3) C2—C1—H1 119.00
C2—C1—C6 121.0 (4) C6—C1—H1 119.00
C1—C2—C3 119.0 (3) C1—C2—H2 120.00
F1—C3—C2 118.6 (3) C3—C2—H2 121.00
F1—C3—C4 119.2 (4) C3—C4—H4 121.00
C2—C3—C4 122.2 (4) C5—C4—H4 121.00
C3—C4—C5 118.7 (3) C4—C5—H5 120.00
C4—C5—C6 120.9 (3) C6—C5—H5 120.00
C1—C6—C5 118.1 (3) C7—C8—H8A 111.00
C1—C6—C7 121.1 (3) C7—C8—H8B 111.00
C5—C6—C7 120.8 (3) C9—C8—H8A 111.00
N1—C7—C6 120.7 (3) C9—C8—H8B 111.00
N1—C7—C8 113.8 (3) H8A—C8—H8B 109.00
C6—C7—C8 125.5 (3) N2—C9—H9 109.00
C7—C8—C9 103.6 (2) C8—C9—H9 109.00
N2—C9—C8 100.7 (2) C10—C9—H9 109.00
N2—C9—C10 111.1 (2) C10—C11—H11 119.00
C8—C9—C10 116.5 (3) C12—C11—H11 119.00
C9—C10—C11 121.5 (3) C11—C12—H12 121.00
C9—C10—C15 120.4 (3) C13—C12—H12 121.00
C11—C10—C15 118.1 (3) C13—C14—H14 121.00
C10—C11—C12 121.4 (4) C15—C14—H14 121.00
C11—C12—C13 118.4 (4) C10—C15—H15 120.00
F2—C13—C12 119.9 (4) C14—C15—H15 120.00
F2—C13—C14 117.3 (4) O1—C16—H16 118.00
C12—C13—C14 122.8 (4) N2—C16—H16 118.00
C7—N1—N2—C9 −4.2 (3) C5—C6—C7—N1 −178.8 (3)
C7—N1—N2—C16 173.1 (3) C5—C6—C7—C8 2.3 (5)
N2—N1—C7—C8 −1.3 (4) C1—C6—C7—N1 0.1 (5)
N2—N1—C7—C6 179.7 (3) C6—C7—C8—C9 −175.2 (3)
C16—N2—C9—C10 66.3 (4) N1—C7—C8—C9 5.9 (4)
C16—N2—C9—C8 −169.7 (3) C7—C8—C9—N2 −7.3 (3)
C9—N2—C16—O1 −1.5 (5) C7—C8—C9—C10 112.8 (3)
N1—N2—C9—C8 7.4 (3) C8—C9—C10—C11 −40.0 (4)
N1—N2—C9—C10 −116.5 (3) C8—C9—C10—C15 142.1 (3)
N1—N2—C16—O1 −178.4 (3) N2—C9—C10—C15 −103.5 (3)
C2—C1—C6—C7 −179.8 (4) N2—C9—C10—C11 74.4 (4)
C6—C1—C2—C3 0.3 (7) C9—C10—C15—C14 178.6 (3)
C2—C1—C6—C5 −0.9 (6) C9—C10—C11—C12 −177.9 (3)
C1—C2—C3—C4 0.5 (7) C15—C10—C11—C12 0.0 (5)
C1—C2—C3—F1 179.0 (4) C11—C10—C15—C14 0.6 (5)
F1—C3—C4—C5 −179.3 (3) C10—C11—C12—C13 0.3 (5)
C2—C3—C4—C5 −0.8 (6) C11—C12—C13—C14 −1.3 (6)
C3—C4—C5—C6 0.2 (5) C11—C12—C13—F2 −179.5 (3)
C4—C5—C6—C1 0.6 (5) F2—C13—C14—C15 −179.8 (3)
C4—C5—C6—C7 179.5 (3) C12—C13—C14—C15 1.9 (6)
C1—C6—C7—C8 −178.8 (3) C13—C14—C15—C10 −1.6 (5)

Hydrogen-bond geometry (Å, °)

D—H···A D—H H···A D···A D—H···A
C4—H4···O1i 0.93 2.50 3.421 (5) 171
C11—H11···O1ii 0.93 2.39 3.296 (5) 165

Symmetry codes: (i) x−2, y−1, z; (ii) x−1, y, z.

Footnotes

Supplementary data and figures for this paper are available from the IUCr electronic archives (Reference: LH5239).

References

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Associated Data

This section collects any data citations, data availability statements, or supplementary materials included in this article.

Supplementary Materials

Crystal structure: contains datablocks global, I. DOI: 10.1107/S160053681101587X/lh5239sup1.cif

e-67-o1292-sup1.cif (18.2KB, cif)

Structure factors: contains datablocks I. DOI: 10.1107/S160053681101587X/lh5239Isup2.hkl

e-67-o1292-Isup2.hkl (134.3KB, hkl)

Supplementary material file. DOI: 10.1107/S160053681101587X/lh5239Isup3.cml

Additional supplementary materials: crystallographic information; 3D view; checkCIF report


Articles from Acta Crystallographica Section E: Structure Reports Online are provided here courtesy of International Union of Crystallography

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