Abstract
In the title compound, C17H15FO2S, the 3-fluorophenyl ring makes a dihedral angle of 86.89 (4)° with the mean plane of the benzofuran fragment. In the crystal, molecules are linked by weak intermolecular C—H⋯O hydrogen bonds. The crystal structure also exhibits a slipped π–π interaction between the furan rings of neighbouring molecules [centroid–centroid distance = 3.719 (2) Å, interplanar distance = 3.475 (2) Å and slippage = 1.325 Å].
Related literature
For the biological activity of benzofuran compounds, see: Aslam et al. (2009 ▶); Galal et al. (2009 ▶); Khan et al. (2005 ▶). For natural products with benzofuran rings, see: Akgul & Anil (2003 ▶); Soekamto et al. (2003 ▶). For structural studies of related 3-(4-fluorophenylsulfinyl)-2,5-dimethyl-1-benzofuran derivatives, see: Choi et al. (2010a
▶,b
▶).
Experimental
Crystal data
C17H15FO2S
M r = 302.35
Triclinic,
a = 6.2942 (2) Å
b = 11.1162 (4) Å
c = 11.8021 (6) Å
α = 110.701 (3)°
β = 100.176 (3)°
γ = 103.621 (2)°
V = 719.39 (5) Å3
Z = 2
Mo Kα radiation
μ = 0.24 mm−1
T = 296 K
0.29 × 0.25 × 0.21 mm
Data collection
Bruker SMART APEXII CCD diffractometer
Absorption correction: multi-scan (SADABS; Bruker, 2009 ▶) T min = 0.935, T max = 0.951
12696 measured reflections
3301 independent reflections
2760 reflections with I > 2σ(I)
R int = 0.122
Refinement
R[F 2 > 2σ(F 2)] = 0.047
wR(F 2) = 0.133
S = 1.07
3301 reflections
193 parameters
H-atom parameters constrained
Δρmax = 0.52 e Å−3
Δρmin = −0.44 e Å−3
Data collection: APEX2 (Bruker, 2009 ▶); cell refinement: SAINT (Bruker, 2009 ▶); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: ORTEP-3 (Farrugia, 1997 ▶) and DIAMOND (Brandenburg, 1998 ▶); software used to prepare material for publication: SHELXL97.
Supplementary Material
Crystal structure: contains datablocks global, I. DOI: 10.1107/S1600536811018654/ez2242sup1.cif
Structure factors: contains datablocks I. DOI: 10.1107/S1600536811018654/ez2242Isup2.hkl
Supplementary material file. DOI: 10.1107/S1600536811018654/ez2242Isup3.cml
Additional supplementary materials: crystallographic information; 3D view; checkCIF report
Table 1. Hydrogen-bond geometry (Å, °).
D—H⋯A | D—H | H⋯A | D⋯A | D—H⋯A |
---|---|---|---|---|
C13—H13⋯O2i | 0.93 | 2.51 | 3.227 (2) | 134 |
Symmetry code: (i) .
supplementary crystallographic information
Comment
Many compounds containing a benzofuran ring system exhibit interesting pharmacological properties such as antibacterial and antifungal, antitumor and antiviral, and antimicrobial activities (Aslam et al., 2009, Galal et al., 2009, Khan et al., 2005). These compounds occur in a wide range of natural products (Akgul & Anil, 2003; Soekamto et al., 2003). As a part of our study of the substituent effect on the solid state structures of 3-(4-fluorophenylsulfinyl)-2,5-dimethyl-1-benzofuran analogues (Choi et al., 2010a,b), we report the crystal structure of the title compound.
In the title compound (Fig. 1), the benzofuran unit is essentially planar, with a mean deviation of 0.007 (1) Å from the least-squares plane defined by the nine constituent atoms. The 3-fluorophenyl ring makes a dihedral angle of 86.89 (4)° with the mean plane of the benzofuran fragment. The crystal packing (Fig. 2) is stabilized by weak intermolecular C—H···O hydrogen bonds between a 3-fluorophenyl H atom and the O atom of the sulfinyl group (Table 1; C13—H13···O2i). The crystal packing (Fig. 2) is further stabilized by a weak slipped π–π interaction between the furan rings of neighbouring molecules, with a Cg···Cgii distance of 3.719 (2) Å and an interplanar distance of 3.475 (2) Å resulting in a slippage of 1.325 Å (Cg is the centroid of the C1/C2/C7/O1/C8 furan ring).
Experimental
77% 3-chloroperoxybenzoic acid (291 mg, 1.3 mmol) was added in small portions to a stirred solution of 3-(3-fluorophenylsulfanyl)-2,5,7-trimethyl-1-benzofuran (342 mg, 1.2 mmol) in dichloromethane (40 mL) at 273 K. After being stirred at room temperature for 4h, the mixture was washed with saturated sodium bicarbonate solution and the organic layer was separated, dried over magnesium sulfate, filtered and concentrated at reduced pressure. The residue was purified by column chromatography (hexane–ethyl acetate, 1:1 v/v) to afford the title compound as a colorless solid [yield 75%, m.p. 434–435 K; Rf = 0.72 (hexane–ethyl acetate, 1:1 v/v)]. Single crystals suitable for X-ray diffraction were prepared by slow evaporation of a solution of the title compound in ethyl acetate at room temperature.
Refinement
All H atoms were positioned geometrically and refined using a riding model, with C—H = 0.95 Å for aryl and 0.96 Å for methyl H atoms. Uiso(H) =1.2Ueq(C) for aryl and 1.5Ueq(C) for methyl H atoms.
Figures
Fig. 1.
The molecular structure of the title compound with the atom numbering scheme. Displacement ellipsoids are drawn at the 50% probability level. H atoms are presented as a small spheres of arbitrary radius.
Fig. 2.
A view of the C—H···O and π–π interactions (dotted lines) in the crystal structure of the title compound. [Symmetry codes: (i) - x + 2, - y + 1, - z + 2 ; (ii) - x + , - y + 1, - z + 1.]
Crystal data
C17H15FO2S | Z = 2 |
Mr = 302.35 | F(000) = 316 |
Triclinic, P1 | Dx = 1.396 Mg m−3 |
Hall symbol: -P 1 | Mo Kα radiation, λ = 0.71073 Å |
a = 6.2942 (2) Å | Cell parameters from 5769 reflections |
b = 11.1162 (4) Å | θ = 2.2–27.5° |
c = 11.8021 (6) Å | µ = 0.24 mm−1 |
α = 110.701 (3)° | T = 296 K |
β = 100.176 (3)° | Block, colourless |
γ = 103.621 (2)° | 0.29 × 0.25 × 0.21 mm |
V = 719.39 (5) Å3 |
Data collection
Bruker SMART APEXII CCD diffractometer | 3301 independent reflections |
Radiation source: rotating anode | 2760 reflections with I > 2σ(I) |
graphite multilayer | Rint = 0.122 |
Detector resolution: 10.0 pixels mm-1 | θmax = 27.5°, θmin = 1.9° |
φ and ω scans | h = −8→8 |
Absorption correction: multi-scan (SADABS; Bruker, 2009) | k = −14→14 |
Tmin = 0.935, Tmax = 0.951 | l = −15→15 |
12696 measured reflections |
Refinement
Refinement on F2 | Primary atom site location: structure-invariant direct methods |
Least-squares matrix: full | Secondary atom site location: difference Fourier map |
R[F2 > 2σ(F2)] = 0.047 | Hydrogen site location: difference Fourier map |
wR(F2) = 0.133 | H-atom parameters constrained |
S = 1.07 | w = 1/[σ2(Fo2) + (0.0679P)2 + 0.086P] where P = (Fo2 + 2Fc2)/3 |
3301 reflections | (Δ/σ)max < 0.001 |
193 parameters | Δρmax = 0.52 e Å−3 |
0 restraints | Δρmin = −0.44 e Å−3 |
Special details
Geometry. All esds (except the esd in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell esds are taken into account individually in the estimation of esds in distances, angles and torsion angles; correlations between esds in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell esds is used for estimating esds involving l.s. planes. |
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > 2sigma(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger. |
Fractional atomic coordinates and isotropic or equivalent isotropic displacement parameters (Å2)
x | y | z | Uiso*/Ueq | ||
S1 | 0.61779 (7) | 0.50213 (4) | 0.83763 (4) | 0.02605 (15) | |
O1 | 0.2342 (2) | 0.38830 (12) | 0.49387 (10) | 0.0275 (3) | |
O2 | 0.8652 (2) | 0.52089 (14) | 0.85568 (12) | 0.0361 (3) | |
F1 | 0.7099 (2) | 0.14993 (13) | 1.00630 (12) | 0.0517 (4) | |
C1 | 0.4798 (3) | 0.42715 (17) | 0.67501 (15) | 0.0249 (3) | |
C2 | 0.5132 (3) | 0.31895 (16) | 0.57616 (15) | 0.0250 (3) | |
C3 | 0.6547 (3) | 0.23900 (18) | 0.56868 (17) | 0.0303 (4) | |
H3 | 0.7618 | 0.2516 | 0.6406 | 0.036* | |
C4 | 0.6325 (3) | 0.14076 (18) | 0.45232 (18) | 0.0342 (4) | |
C5 | 0.4696 (3) | 0.12330 (18) | 0.34451 (18) | 0.0350 (4) | |
H5 | 0.4573 | 0.0561 | 0.2670 | 0.042* | |
C6 | 0.3262 (3) | 0.20148 (18) | 0.34811 (16) | 0.0307 (4) | |
C7 | 0.3566 (3) | 0.29841 (16) | 0.46668 (15) | 0.0256 (4) | |
C8 | 0.3133 (3) | 0.46537 (17) | 0.62103 (15) | 0.0253 (3) | |
C9 | 0.7843 (4) | 0.0524 (2) | 0.4405 (2) | 0.0470 (5) | |
H9A | 0.9238 | 0.0970 | 0.4290 | 0.070* | |
H9B | 0.7075 | −0.0332 | 0.3691 | 0.070* | |
H9C | 0.8177 | 0.0373 | 0.5160 | 0.070* | |
C10 | 0.1525 (4) | 0.1847 (2) | 0.23408 (17) | 0.0417 (5) | |
H10A | 0.0034 | 0.1632 | 0.2459 | 0.063* | |
H10B | 0.1568 | 0.1125 | 0.1608 | 0.063* | |
H10C | 0.1863 | 0.2678 | 0.2226 | 0.063* | |
C11 | 0.2019 (3) | 0.56740 (18) | 0.67277 (17) | 0.0324 (4) | |
H11A | 0.0490 | 0.5220 | 0.6687 | 0.049* | |
H11B | 0.1982 | 0.6205 | 0.6241 | 0.049* | |
H11C | 0.2863 | 0.6259 | 0.7591 | 0.049* | |
C12 | 0.5032 (3) | 0.35709 (16) | 0.86983 (14) | 0.0243 (3) | |
C13 | 0.6565 (3) | 0.30906 (17) | 0.92600 (15) | 0.0280 (4) | |
H13 | 0.8132 | 0.3478 | 0.9441 | 0.034* | |
C14 | 0.5646 (3) | 0.20107 (18) | 0.95355 (17) | 0.0326 (4) | |
C15 | 0.3363 (3) | 0.14339 (18) | 0.93105 (17) | 0.0352 (4) | |
H15 | 0.2814 | 0.0706 | 0.9513 | 0.042* | |
C16 | 0.1877 (3) | 0.19579 (19) | 0.87727 (18) | 0.0352 (4) | |
H16 | 0.0313 | 0.1583 | 0.8618 | 0.042* | |
C17 | 0.2699 (3) | 0.30294 (18) | 0.84667 (17) | 0.0309 (4) | |
H17 | 0.1703 | 0.3384 | 0.8110 | 0.037* |
Atomic displacement parameters (Å2)
U11 | U22 | U33 | U12 | U13 | U23 | |
S1 | 0.0285 (3) | 0.0248 (2) | 0.0201 (2) | 0.00624 (17) | 0.00117 (16) | 0.00820 (17) |
O1 | 0.0280 (6) | 0.0311 (6) | 0.0233 (6) | 0.0126 (5) | 0.0020 (5) | 0.0117 (5) |
O2 | 0.0248 (6) | 0.0437 (7) | 0.0335 (7) | 0.0014 (5) | −0.0012 (5) | 0.0196 (6) |
F1 | 0.0560 (8) | 0.0466 (7) | 0.0606 (8) | 0.0225 (6) | 0.0038 (6) | 0.0334 (7) |
C1 | 0.0251 (8) | 0.0269 (8) | 0.0228 (8) | 0.0100 (6) | 0.0033 (6) | 0.0111 (7) |
C2 | 0.0256 (8) | 0.0249 (8) | 0.0247 (8) | 0.0080 (7) | 0.0053 (6) | 0.0115 (7) |
C3 | 0.0283 (9) | 0.0320 (9) | 0.0349 (9) | 0.0141 (7) | 0.0078 (7) | 0.0163 (8) |
C4 | 0.0365 (10) | 0.0290 (9) | 0.0430 (11) | 0.0148 (8) | 0.0173 (8) | 0.0159 (8) |
C5 | 0.0454 (11) | 0.0257 (8) | 0.0300 (9) | 0.0093 (8) | 0.0147 (8) | 0.0067 (8) |
C6 | 0.0352 (9) | 0.0274 (8) | 0.0255 (8) | 0.0058 (7) | 0.0078 (7) | 0.0098 (7) |
C7 | 0.0267 (8) | 0.0248 (8) | 0.0250 (8) | 0.0091 (7) | 0.0059 (7) | 0.0104 (7) |
C8 | 0.0267 (8) | 0.0264 (8) | 0.0222 (8) | 0.0084 (7) | 0.0040 (6) | 0.0110 (7) |
C9 | 0.0534 (13) | 0.0413 (11) | 0.0591 (13) | 0.0285 (10) | 0.0272 (11) | 0.0216 (11) |
C10 | 0.0533 (12) | 0.0370 (10) | 0.0235 (9) | 0.0065 (9) | 0.0003 (8) | 0.0101 (8) |
C11 | 0.0341 (10) | 0.0335 (9) | 0.0336 (9) | 0.0173 (8) | 0.0086 (8) | 0.0148 (8) |
C12 | 0.0290 (8) | 0.0238 (8) | 0.0164 (7) | 0.0082 (6) | 0.0034 (6) | 0.0058 (6) |
C13 | 0.0275 (8) | 0.0291 (8) | 0.0241 (8) | 0.0100 (7) | 0.0031 (7) | 0.0088 (7) |
C14 | 0.0439 (10) | 0.0287 (8) | 0.0261 (8) | 0.0176 (8) | 0.0051 (8) | 0.0109 (7) |
C15 | 0.0465 (11) | 0.0263 (9) | 0.0292 (9) | 0.0071 (8) | 0.0104 (8) | 0.0104 (7) |
C16 | 0.0306 (9) | 0.0335 (9) | 0.0360 (10) | 0.0046 (8) | 0.0098 (8) | 0.0116 (8) |
C17 | 0.0270 (8) | 0.0339 (9) | 0.0292 (9) | 0.0107 (7) | 0.0038 (7) | 0.0116 (8) |
Geometric parameters (Å, °)
S1—O2 | 1.4876 (13) | C9—H9A | 0.9600 |
S1—C1 | 1.7527 (16) | C9—H9B | 0.9600 |
S1—C12 | 1.8017 (17) | C9—H9C | 0.9600 |
O1—C8 | 1.3639 (19) | C10—H10A | 0.9600 |
O1—C7 | 1.3851 (19) | C10—H10B | 0.9600 |
F1—C14 | 1.357 (2) | C10—H10C | 0.9600 |
C1—C8 | 1.360 (2) | C11—H11A | 0.9600 |
C1—C2 | 1.437 (2) | C11—H11B | 0.9600 |
C2—C7 | 1.389 (2) | C11—H11C | 0.9600 |
C2—C3 | 1.391 (2) | C12—C17 | 1.386 (2) |
C3—C4 | 1.378 (3) | C12—C13 | 1.386 (2) |
C3—H3 | 0.9300 | C13—C14 | 1.377 (3) |
C4—C5 | 1.407 (3) | C13—H13 | 0.9300 |
C4—C9 | 1.513 (2) | C14—C15 | 1.363 (3) |
C5—C6 | 1.389 (3) | C15—C16 | 1.388 (3) |
C5—H5 | 0.9300 | C15—H15 | 0.9300 |
C6—C7 | 1.378 (2) | C16—C17 | 1.377 (3) |
C6—C10 | 1.499 (2) | C16—H16 | 0.9300 |
C8—C11 | 1.479 (2) | C17—H17 | 0.9300 |
O2—S1—C1 | 108.38 (8) | H9A—C9—H9C | 109.5 |
O2—S1—C12 | 105.93 (7) | H9B—C9—H9C | 109.5 |
C1—S1—C12 | 97.25 (7) | C6—C10—H10A | 109.5 |
C8—O1—C7 | 106.64 (12) | C6—C10—H10B | 109.5 |
C8—C1—C2 | 107.69 (14) | H10A—C10—H10B | 109.5 |
C8—C1—S1 | 123.27 (13) | C6—C10—H10C | 109.5 |
C2—C1—S1 | 129.04 (12) | H10A—C10—H10C | 109.5 |
C7—C2—C3 | 119.25 (15) | H10B—C10—H10C | 109.5 |
C7—C2—C1 | 104.76 (13) | C8—C11—H11A | 109.5 |
C3—C2—C1 | 135.99 (15) | C8—C11—H11B | 109.5 |
C4—C3—C2 | 118.52 (16) | H11A—C11—H11B | 109.5 |
C4—C3—H3 | 120.7 | C8—C11—H11C | 109.5 |
C2—C3—H3 | 120.7 | H11A—C11—H11C | 109.5 |
C3—C4—C5 | 119.93 (16) | H11B—C11—H11C | 109.5 |
C3—C4—C9 | 119.97 (17) | C17—C12—C13 | 121.95 (16) |
C5—C4—C9 | 120.09 (18) | C17—C12—S1 | 120.18 (12) |
C6—C5—C4 | 123.21 (17) | C13—C12—S1 | 117.72 (13) |
C6—C5—H5 | 118.4 | C14—C13—C12 | 116.56 (16) |
C4—C5—H5 | 118.4 | C14—C13—H13 | 121.7 |
C7—C6—C5 | 114.34 (16) | C12—C13—H13 | 121.7 |
C7—C6—C10 | 121.75 (17) | F1—C14—C15 | 118.44 (17) |
C5—C6—C10 | 123.91 (17) | F1—C14—C13 | 118.02 (17) |
C6—C7—O1 | 124.90 (15) | C15—C14—C13 | 123.54 (16) |
C6—C7—C2 | 124.74 (15) | C14—C15—C16 | 118.45 (17) |
O1—C7—C2 | 110.36 (14) | C14—C15—H15 | 120.8 |
C1—C8—O1 | 110.54 (14) | C16—C15—H15 | 120.8 |
C1—C8—C11 | 133.15 (16) | C17—C16—C15 | 120.52 (17) |
O1—C8—C11 | 116.28 (13) | C17—C16—H16 | 119.7 |
C4—C9—H9A | 109.5 | C15—C16—H16 | 119.7 |
C4—C9—H9B | 109.5 | C16—C17—C12 | 118.94 (16) |
H9A—C9—H9B | 109.5 | C16—C17—H17 | 120.5 |
C4—C9—H9C | 109.5 | C12—C17—H17 | 120.5 |
O2—S1—C1—C8 | −138.58 (15) | C1—C2—C7—C6 | −178.81 (16) |
C12—S1—C1—C8 | 111.91 (16) | C3—C2—C7—O1 | −179.52 (15) |
O2—S1—C1—C2 | 41.89 (18) | C1—C2—C7—O1 | 0.63 (19) |
C12—S1—C1—C2 | −67.61 (17) | C2—C1—C8—O1 | 0.7 (2) |
C8—C1—C2—C7 | −0.79 (19) | S1—C1—C8—O1 | −178.92 (12) |
S1—C1—C2—C7 | 178.79 (14) | C2—C1—C8—C11 | 178.47 (19) |
C8—C1—C2—C3 | 179.4 (2) | S1—C1—C8—C11 | −1.1 (3) |
S1—C1—C2—C3 | −1.0 (3) | C7—O1—C8—C1 | −0.30 (19) |
C7—C2—C3—C4 | −0.7 (3) | C7—O1—C8—C11 | −178.49 (15) |
C1—C2—C3—C4 | 179.12 (19) | O2—S1—C12—C17 | −172.33 (13) |
C2—C3—C4—C5 | 0.1 (3) | C1—S1—C12—C17 | −60.80 (15) |
C2—C3—C4—C9 | 179.70 (17) | O2—S1—C12—C13 | 12.06 (14) |
C3—C4—C5—C6 | 0.2 (3) | C1—S1—C12—C13 | 123.59 (13) |
C9—C4—C5—C6 | −179.39 (19) | C17—C12—C13—C14 | 2.3 (2) |
C4—C5—C6—C7 | 0.1 (3) | S1—C12—C13—C14 | 177.84 (12) |
C4—C5—C6—C10 | 179.67 (18) | C12—C13—C14—F1 | 178.73 (15) |
C5—C6—C7—O1 | 179.93 (16) | C12—C13—C14—C15 | −1.5 (3) |
C10—C6—C7—O1 | 0.3 (3) | F1—C14—C15—C16 | 179.91 (16) |
C5—C6—C7—C2 | −0.7 (3) | C13—C14—C15—C16 | 0.1 (3) |
C10—C6—C7—C2 | 179.67 (17) | C14—C15—C16—C17 | 0.5 (3) |
C8—O1—C7—C6 | 179.21 (16) | C15—C16—C17—C12 | 0.3 (3) |
C8—O1—C7—C2 | −0.23 (19) | C13—C12—C17—C16 | −1.8 (3) |
C3—C2—C7—C6 | 1.0 (3) | S1—C12—C17—C16 | −177.22 (13) |
Hydrogen-bond geometry (Å, °)
D—H···A | D—H | H···A | D···A | D—H···A |
C13—H13···O2i | 0.93 | 2.51 | 3.227 (2) | 134 |
Symmetry codes: (i) −x+2, −y+1, −z+2.
Footnotes
Supplementary data and figures for this paper are available from the IUCr electronic archives (Reference: EZ2242).
References
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Associated Data
This section collects any data citations, data availability statements, or supplementary materials included in this article.
Supplementary Materials
Crystal structure: contains datablocks global, I. DOI: 10.1107/S1600536811018654/ez2242sup1.cif
Structure factors: contains datablocks I. DOI: 10.1107/S1600536811018654/ez2242Isup2.hkl
Supplementary material file. DOI: 10.1107/S1600536811018654/ez2242Isup3.cml
Additional supplementary materials: crystallographic information; 3D view; checkCIF report