Abstract
Cell fate decisions mediated by the Notch signalling pathway require direct cell–cell contact between adjacent cells. In Drosophila melanogaster, an external sensory organ (ESO) develops from a single sensory organ precursor (SOP) and its fate specification is governed by differential Notch activation. Here we show that mutations in actin-related protein-3 (Arp3) compromise Notch signalling, leading to a fate transformation of the ESO. Our data reveal that during ESO fate specification, most endocytosed vesicles containing the ligand Delta traffic to a prominent apical actin-rich structure (ARS) formed in the SOP daughter cells. Using immunohistochemistry and transmission electron microscopy (TEM) analyses, we show that the ARS contains numerous microvilli on the apical surface of SOP progeny. In Arp2/3 and WASp mutants, the surface area of the ARS is substantially reduced and there are significantly fewer microvilli. More importantly, trafficking of Delta-positive vesicles from the basal area to the apical portion of the ARS is severely compromised. Our data indicate that WASp-dependent Arp2/3 actin polymerization is crucial for apical presentation of Delta, providing a mechanistic link between actin polymerization and Notch signalling.
Notch signalling is an evolutionarily conserved pathway used by metazoans to control cell fate decisions1,2. The Notch receptor and its ligands Delta and Serrate (Jagged in vertebrates) are single-pass transmembrane proteins. Cell–cell communication begins when the extracellular domain of the ligand on the signal-sending cell interacts with the extracellular domain of the Notch receptor on the signal-receiving cell. This interaction triggers a series of proteolytic cleavages that releases the intracellular domain of Notch, which enters the nucleus and functions as a transcriptional regulator3.
Notch signalling mediates key decisions during nervous system develop-ment4, including patterning and fate specification of the ESOs5. Each ESO is composed of four cell types (shaft, socket, sheath and neuron) and is derived from a single cell, the SOP (also called the pI cell), which is selected through Notch-mediated lateral inhibition at about 8–12 h after puparium formation (APF; Fig. 1a). The stage when the SOP has not yet undergone cell division is referred to as the 1-cell stage (15–18 h APF). During the 2-cell stage (~18–18.30 h APF) the SOP undergoes asymmetric cell division to generate the anterior pIIb and posterior pIIa (Fig. 1a). Because of the asymmetric distribution of cell fate determinants such as Numb and Neuralized6,7, Notch signalling is differentially activated in pIIa and pIIb. The pIIa divides to create the external cells of the ESO, the shaft and socket cells. The pIIb divides twice to create the internal cells of the ESO, the neuron and sheath cell8. These four differentiated cells are collectively called the sensory cluster.
Delta and Serrate act redundantly to activate Notch during specification of pIIa and pIIb9. Recent studies indicate that endocytosis of Delta in the signal-sending cell is crucial for its ability to activate Notch10. An alternative, but not mutually exclusive model, is that ligand endocytosis promotes trafficking of the ligand to an endocytic recycling compartment, resulting in its activation11,12. In addition, apical trafficking of Delta seems to be important for proper fate specification in the SOP lineage13. However, the nature of ligand activation or the requirement for apical trafficking of the ligand remains unclear.
Here, we report that there is an apical actin-enriched structure in the pIIa and pIIb cells that contains numerous microvilli. The surface area of the actin-rich region and the number of microvilli are markedly reduced in Arp2/3 complex and WASp mutants. More importantly, we found that the Arp2/3 complex and WASp have crucial roles in trafficking of endocytosed Delta vesicles to an apical ARS.
RESULTS
Mutations in Arp3 result in a pIIa-to-pIIb cell fate transformation in Drosophila ESO lineages
Notch loss-of-function results in a pIIa-to-pIIb transformation, leading to loss of bristles14. Previous genetic screens based on assaying mitotic clones on the adult Drosophila thorax for bristle abnormalities13,15,16 have identified components in the Notch pathway14. We performed a similar F1 mitotic recombination screen on chromosome arm 3L16 and isolated one complementation group consisting of three homozygous lethal alleles (83F, 515FC and 1066PC) that cause bristle loss in clones (Fig. 1b, b´). Using a recombination-based mapping strategy17, the lethality of these alleles was mapped to the 66B cytological region (Fig. 1c). We obtained a P element EP(3)3640 (ref. 18) inserted upstream of the Arp3 gene that failed to complement our alleles, and identified molecular lesions in Arp3 for the three alleles (Fig. 1c). Overexpression of the Arp3 cDNA in Arp3 mutant clones rescued the lethality and ESO phenotype (Fig. 1d), demonstrating that the observed phenotypes are caused by loss of Arp3.
Arp3 is part of the seven-protein Arp2/3 complex, which functions together for polymerization of branched actin filaments19. Another component of the Arp2/3 complex, Arpc1, was shown to be involved in ring canal formation during oogenesis in Drosophila18. As with Arp3 alleles, Arpc1Q25st clones also cause bristle loss (Fig. 1e)20. Bristle loss in Arp3 clones does not result from a failure to specify SOPs (Supplementary Information, Fig. S1a, a´). To examine whether bristle loss in Arp3 clones is associated with a Notch loss-of-function defect, SOP progeny at 24 h APF were labelled with differentiation markers. In wild-type sensory clusters, all four cells expressed the homeodomain protein Cut and one expressed the neuronal marker ELAV (Fig. 1f). In contrast, sensory clusters in both Arp3 and Arpc1Q25st mutant clones contained 4–6 ELAV-positive cells (Fig. 1g and data not shown), suggesting that there is a pIIa-to-pIIb fate transformation.
Although a pIIa-to-pIIb transformation might result from disruption of asymmetric localization of cell fate determinants6,7, both Neuralized and Numb were asymmetrically localized in Arp3 mutant SOPs (Supplementary Information, Fig. S1c, e). One of the activators of the Arp2/3 complex, Wiskott-Aldrich syndrome protein (WASp)21, is also involved in a similar fate specification process in Drosophila22. Together these observations suggest a specific requirement for WASp-regulated Arp2/3-complex function in Notch signalling.
Arp3 functions in the signal-sending cell during Notch signalling
Is Arp2/3 function required in the signal-sending or the signal-receiving cell during Notch signalling? We first determined the epistatic relationship between Notch and Arp3 with a constitutively active Notch that is independent of ligand activation (NECN)23. Expression of NECN in the ESO lineage causes a Notch gain-of-function phenotype, which results in generation of extra socket cells13. Overexpression of NECN in Arp3 clones, as in wild-type cells, resulted in a Notch gain-of-function phenotype, indicating that a ligand-independent form of Notch is epistatic to Arp3 (Fig. 2a). This places the function of Arp3 upstream of Notch activation, possibly in the signal-sending cell.
To gather evidence for a requirement of Arp3 in the signal-sending cell, we examined its function in oogenesis. Egg chambers are individual units, consisting of germline cells surrounded by somatic follicle cells. The follicle cells can be further divided into three distinct populations: main body follicle cells (phalloidin-positive cells, Fig. 2b), which encapsulate the germline cyst; polar cells, which function as signalling centres (FasIII-positive cells, Fig. 2b); and stalk cells that connect neighbouring cysts (yellow arrow, Fig. 2b). The role of Notch signalling is well-documented in oogenesis24,25, and signal-sending and receiving cells are spatially well-segregated. Notch loss-of-function causes the inability of the follicle cells to encapsulate germline cysts and leads to the formation of giant compound egg chambers25. However, Delta loss-of-function in follicle cells does not result in an encapsulation defect25 but rather, loss of stalk cells and partial fusion of the cysts. Delta is required in the anterior polar follicle cells of the posterior egg chamber to specify stalk cells25,26. Generating follicle cell clones of Notch and Delta, therefore, results in distinct phenotypes. We found that loss of Arp3 phenocopied loss-of-function of Delta. Mutant clones of Arp3 (n = 14) in anterior polar follicle cells resulted in loss of stalk cells and partial fusion of adjacent cysts (white arrow, Fig. 2b). At later stages of oogenesis, Delta signals from the germ cells (signal-sending cells) activate Notch in the overlying somatic follicle cells (signal-receiving cells), resulting in expression of a Notch downstream target, Hindsight (Hnt)27. Arp3 does not seem to be required in the signal-receiving cell for Notch function, as expression of Hnt was normal in Arp3 mutant follicle cell clones (Fig. 2c, c´).
To further examine whether Arp2/3 function is required in the signal-sending cell during wing formation, a Delta overexpression assay was performed. During wing development, pre-patterning signals, including Notch, are required to compartmentalize the immature wing imaginal disc at the third-instar larva28. Notch signalling is required to activate Cut expression at the dorsal-ventral boundary29,30. Previous studies have shown that overexpression of Delta in wild-type clones near the dorsal-ventral boundary results in ectopic Cut expression in the neighbouring cells (Fig. 2d)11,16,29,30. However, similar overexpression of Delta in Arpc1 clones failed to activate Cut expression and resulted in loss of endogenous Cut expression when the clone crossed the dorsal-ventral boundary (Fig. 2e). These data suggest that Arp2/3 complex function is required for the normal function of Delta in the signal-sending cell.
The Arp2/3 complex is not required for Delta endocytosis
Delta must be endocytosed in the signal-sending cell to activate Notch on the receiving cell6,31. As Arp2/3 and WASp have been shown to be required for clathrin-mediated endocytosis in yeast32,33, Arp2/3 might be required for Delta endocytosis during fate specification. However, by performing a Delta endocytosis assay6 at the 2-cell stage, we found that Delta is endocytosed similarly to wild-type cells (Fig. 3a) in Arpc1 and Arp3 mutant tissue (Fig. 3c, d). By contrast, in shibire (Dynamin) mutant cells kept at the restrictive temperature (Fig. 3b), Delta is not endocytosed34,35. This indicates that the Arp2/3 complex is not required for ligand endocytosis during Notch signalling.
A specific ARS forms during fate specification in the ESO lineage
As Arp2/3 is required for polymerization of branched actin filaments19, we visualized filamentous actin (F-actin) in the ESO lineage with phalloidin. In the wild-type, a prominent apical ARS was present in the pIIa and pIIb (pIIa-pIIb) cells (Fig. 4a, a´´). Co-staining of phalloidin and E-cadherin (DE-Cad), which highlights the apical-most stalk region of the pIIb cell that is engulfed by the pIIa cell36, indicates that the ARS is present in both pIIa-pIIb cells apically (Supplementary Information, Fig. S1f, f´). However, no specialized apical actin enrichment was observed at the earlier 1-cell stage (Supplementary Information, Fig. S1g, g´). In Arpc1 (yellow arrows, Fig. 4a, a´´), Arp3 and WASp (data not shown) pIIa-pIIb cells, the ARS was formed. However, the apical area of the ARS was markedly reduced in Arp3 (9.57 ± 5.32 µm2; mean ± s.e.m, n = 22), Arpc1 (12.25 ± 6.89 µm2; n = 19) and WASp (21.86 ± 7.74 µm2; n = 19) pIIa-pIIb cells when compared with the wild-type (43.48 ± 13.79 µm2; Fig. 4b; n = 18). The ARS in wild-type pIIa-pIIb cells formed an umbrella shape along the xy axis, whereas in about 50% of the mutant ARS, the stalk of the umbrella was not formed properly (Fig. 4a´´, d).
To test whether the ARS is affected in other mutants, α-Adaptin15 and numb7, which regulate Notch signalling during pIIa-pIIb specification, were examined. In mutant clones of α-Adaptin (Fig. 4e) and numb (Fig. 4f) the ARS was formed normally, suggesting that the ARS defect is specific to Arpc1, Arp3 and WASp. In neuralized clones, where both lateral inhibition and fate specification37 are affected, the ARS was clearly observed in all SOP progeny (Fig. 4 g, g´´). This suggests that most, if not all, SOP progeny at the 2-cell stage are instructed to form an ARS.
To examine whether the Arp2/3 complex colocalizes with the ARS, we overexpressed a GFP-tagged Arp3 cDNA construct (UAS–Arp3-GFP) by neuralized-GAL4. We observed that much of the GFP-tagged Arp3 protein colocalized with the ARS (Supplementary Information, Fig. S1h, h´´). The presence of the ARS in the pIIa-pIIb cells during fate specification and the fact that the ARS is morphologically affected in the Arp3, Arpc1 and WASp mutants indicate that it has a role in Notch signal transduction.
Abundant actin-rich microvilli are present at the apical surface of pIIa-pIIb
The ARS was further analysed using TEM to visualize the actin cytoskeleton at the ultracellular level38. To distinguish the pIIa-pIIb cell-membrane from that of epithelial cells, HRP was overexpressed in the pIIa-pIIb cells using neuralized–GAL4 and UAS-CD2::HRP (Fig. 5a). On DAB staining, HRP labelling was visualized as a darker cell membrane outline in the SOPs. The serial apical cross-sections (0–2520 nm) of the pIIa-pIIb cells revealed numerous membrane protrusions (Fig. 5b; Supplementary Information, Fig. S2). At high magnification (× 10,000), we clearly observed actin bundles within these membranous extensions (Fig. 5c), which was confirmed by immuno-electron microscopy with phalloidin (Fig. 6a, a´). TEM analysis of Arp3 pIIa-pIIb cells (Fig. 5d – f) revealed fewer finger-like projections than in wild-type cells (Fig. 5g), consistent with the marked reduction in apical surface area of the ARS in Arp3, Arpc1 and WASp mutants (Fig. 4b). Finger-like projections were present on the epithelial cells, but there were fewer and they were markedly shorter (only about 60 nm in length), compared with those of pIIa-pIIb (Supplementary Information, Fig. S3a, c).
The finger-like actin projections on the pIIa-pIIb cells resemble micro-villi, which are typically observed to be densely packed in intestinal and kidney epithelial cells39, and circulating leukocytes40. Microvilli on the intestinal and kidney epithelial cells are thought to increase the surface area for absorption, whereas in leukocytes they have been implicated in receptor presentation, which enables leukocyte adhesion41,42. To examine whether the finger-like projections are microvilli, the ARS was immunostained with a microvilli marker myosin 1B (Myo1B), which forms lateral tethers between the microvillar membrane and underlying actin filament core43. We found that Myo1B is indeed enriched in the apical region of pIIa-pIIb cells (Fig. 6b, b´), specifically at the base of the ‘umbrella’ region of the ARS (Fig. 6b´´´). This localization of Myo1B was unaffected in Arp3 mutant pIIa-pIIb cells (Supplementary Information, Fig. S3e, e´). These data indicate that microvilli are present on the apical region of pIIa-pIIb cells.
Delta traffics to the ARS
Intracellular vesicular trafficking of Delta is emerging as a key regulatory step in the activation of Notch44,45. We investigated Delta trafficking by co-staining of phalloidin and Delta. In wild-type pIIa-pIIb cells, Delta vesicles colocalized with the apical microvillar region of the ARS (Fig. 7a and transverse section in 7a´). In Arpc1 (Fig. 7b and transverse section in Fig. 7b´) and Arp3 (data not shown) pIIa-pIIb, fewer Delta vesicles were colocalized with the ARS. Furthermore, when serial sections were projected to visualize the whole cell (Fig. 7c, c´´), the Delta vesicles were clustered close to the wild-type ARS, whereas the vesicles were widely distributed in the cytoplasm of Arpc1 pIIa-pIIb cells. The marked reduction of Delta vesicles colocalizing with the ARS in the mutant pIIa-pIIb cells suggests that Arp2/3 has a role in Delta trafficking to the ARS.
Arp2/3 and WASp are required for trafficking of endocytosed Delta to the apical ARS
To investigate Delta trafficking in Arp2/3 and WASp mutants, we performed pulse-chase labelling experiments12 to monitor the internalization of Delta in living pupae. Internalization of Delta vesicles with respect to ARS was examined at three different time-points (0, 30 and 60 min). At 0 min Delta vesicles were present apically (~0.5 µm into the sample) and colocalized with ARS in wild-type (Fig. 8a, a´´), Arp3 (Fig. 8b, b´´), Arpc1 and WASp (data not shown) SOP progeny. At 30 min post-internalization, Delta vesicles were localized basally (~6 µm) in wild-type (Fig. 8c, c´´) and Arp3 (Fig. 8d, d´´) SOP progeny, indicating that the Delta vesicles had trafficked intracellularly at this time-point. However, 60 min after internalization, localization of Delta vesicles in mutants differed from the wild-type. In the wild-type, about 6–10 Delta-positive vesicles colocalized apically on the ARS (Fig. 8e, e ´´), suggesting that endocytosed Delta traffics back to the apical microvilli. In Arp3 (Fig. 8f, f´´), Arpc1 (Supplementary Information, Fig. S4a, a´´) and WASp (Supplementary Information, Fig. S4b, b´´) mutants, Delta vesicles were not localized apically on the ARS. Instead, they were found basally in the cytoplasm (~6 µm into the cell; Fig. 8f´, f´´; Supplementary Information, Fig. S4a´−b´´), suggesting a defect in Delta trafficking. Indeed, the number of Delta vesicles that traffic to the microvillar region of the ARS at 60 min post-chase was significantly lower in the Arpc1, Arp3 and WASp pIIa-pIIb than in wild-type cells (Fig. 8g). However, the total number of internalized Delta vesicles and the intensity of Delta signal in the SOP progeny at 60 min post-chase were very similar in wild-type and mutants (Supplementary Information, Fig. S4c, d). In summary, initially Delta is properly targeted apically at the ARS and endocytosed (Fig. 8a–b ´´). Delta traffics basally in both wild-type and mutants (Fig. 8c–d´´) 30 min after internalization. However, endocytosed Delta is not targeted back to the microvillar region in Arp3, Arpc1 and WASp SOP progeny 60 min post-chase.
It has been proposed that Delta must be endocytosed and targeted to a specific endosomal compartment to become activated11, possibly through Rab11-positive recycling endosomes12,13. By examining the distribution of the vesicular compartments, we found that the early endosome and the recycling endosome were enriched on the ARS (Supplementary Information, Fig. S4e–h´). Pulse-chase of endocytosed Delta through these compartments (Supplementary Information, Fig S5, Fig S6), showed no significant defects in the localization and abundance of these endosomal compartments or the ability of Delta to traffic through these endosomal compartments in Arpc1 mutant SOP progeny. The internalized Delta is thought to be proteolytically cleaved in an unknown compartment11. We found that Delta processing in Arp3 mutants is similar to that in the wild-type (Supplementary Information, Fig. S7).
In summary, we surmise that a defect in trafficking of endocytosed Delta to the apical microvillar portion of the ARS leads to a failure in Delta signalling. We conclude that this defect underlies the pIIa-to-pIIb fate transformation phenotype in Arp3, Arpc1 and WASp mutants.
DISCUSSION
Previous reports have suggested that trafficking of a subset of endocytosed Delta to the apical membrane in the pIIb cell is required for its ability to activate Notch in the pIIa cell12,13. We have uncovered a highly stereotyped ARS that consists of apical microvilli and a lateral ‘stalk’ region. In Arp2/3 and WASp pIIa-pIIb cells, the apical surface area of the ARS was significantly reduced and the number of microvilli on the apical region was also reduced. In addition, trafficking of endocytosed Delta to the apical microvilli-rich region of the ARS was severely impaired in Arp3 mutants. Although numerous studies have focused on the SOP daughter cells, the ARS and the microvilli have not been described previously. These microvillar structures are very different from filopodia46, which have been reported to have a role in lateral inhibition47 at an earlier stage. Our data indicate that apical trafficking of Delta to the ARS is required for its ability to signal.
Given the role of Arp2/3 in forming branched actin filaments, one of the primary roles of the Arp2/3 complex and WASp during Notch signalling is probably to form actin networks48, and to enable and/or to promote the trafficking of Delta vesicles to the ARS (Fig. 8h). This requirement for endocytosed Delta localization to the microvilli during Notch signalling is akin to findings showing that localization of Smoothened to primary cilia is important for its activation during Hedgehog (Hh) signal transduction49,50. An interesting study performed in circulating lymphocytes has demonstrated a crucial requirement for microvillar receptor presentation in leukocyte adhesion to the endothelial membrane41. In an analogous manner to findings in leukocytes, microvillar presentation of Delta might enhance its ability to contact Notch on the surface of the adjacent cell. As Notch signalling is a major contact-dependent signalling pathway, microvilli might therefore increase the surface area of contact between the signal-sending and receiving cells, enhancing the ability of the ligand to interact with the receptor.
On the basis of the well-characterized role for WASp and Arp2/3 in clathrin-mediated endocytosis32, it was speculated that Arp2/3 and WASp might be required for endocytosis of Delta and/or Notch during signalling51. However, our data indicate that the Arp2/3 complex is not required for Notch in the signal-receiving cell. Our data also indicate that the Arp2/3 complex is not required to endocytose Delta. It is possible that endocytosis of Delta occurs in a clathrin-independent manner52,53.
The involvement of WASp during Notch-mediated fate decisions might have implications for its mammalian homologue in Wiskott-Aldrich syndrome, an X-linked immunodeficiency54. Given that Notch signalling is required for proper T-cell development55 and differentiation of peripheral T-cells56, defects in Delta trafficking caused by WASp-mediated actin polymerization might underlie the loss and aberrant function of T cells in patients with Wiskott-Aldrich syndrome. Interestingly, microvilli on the surface of lymphocytes might also have a central role in receptor presentation in macrophages and T cells41,42. It will be interesting to investigate whether WASp has a role in Notch signalling during T-cell development and activation.
METHODS
Methods and any associated references are available in the online version of the paper at http://www.nature.com/naturecellbiology/
Drosophila genetics
Stocks used in this study were: 1) y w; FRT80B (isogenized), 2) y w Ubx–FLP; RpS174 Ubi–GFP.nls FRT80B/TM3 Ser, 3) y w hs-FLP; UAS–NECN(NEXT)/CyO; MKRS/TM2 (ref. 57), 4) y w; UAS-Arp3::GFP58, 5) w; Wsp3/TM6B Tb59, 6) Df(3R)3450/TM6B Tb, 7) y w; Arpc1Q25St FRT40A /CyO Kr-GAL4, UAS–GFP60, 8) y w Ubx–FLP; Ubi–GFP.nls FRT40A/CyO, 9) y w hs-FLP; RpS174 Ubi–GFP FRT80B/ TM6B Tb, 10) y hs-FLP tubα1–GAL4 UAS–GFP. nls-6xMyc; tub–GAL80 RpS174 FRT80B/TM6B Tb, 11) w*; UAS–CD2::HRP/ CyO (Bloomington Stock Center)61, 12) w1118; neurA101–GAL4 KgV/TM3 Sb1 (Bloomington Stock Center)62, 13) y w; numb2 ck FRT40A/CyO63, 14) y w ey-FLP; Adaear4 FRT40A/CyO y+ (ref. 64), 15) w; FRT82B neur1F65/TMB6B Tb65 16) y w; sca109–68-GAL4 (ref. 66).
Rescue experiments were performed using the MARCM technique. Flies of genotype y hs-FLP tubα1–GAL4 UAS–GFP.nls-6×.Myc; UAS–Arp3::GFP/+; tub–GAL80 RpS174 FRT80B/ Arp3515FC FRT80B were examined. The homozygous mutant bristles with longer and thicker appearance were differentiated from the short and thin RpS174 (Minute phenotype) bristles.
Epistasis analysis of Arp3 with the ligand-independent form of Notch57, NECN was performed by examining flies of the genotype y w Ubx–FLP; sca109–68-GAL4/ UAS-NECN; y+ w+ FRT80B/mwh Arp383F FRT80B. Arp3 follicle cell clones in egg chambers were generated by heat-shocking virgin females of genotype y w hs-FLP/+; FRT80B Arp3515FC/ RpS174 Ubi–GFP FRT80B for 90 min at 38 °C for 3 consecutive days. Ovaries of heat-shocked females were dissected after 2–3 days of mating on medium supplemented with yeast.
The wing-disc signal-sending cell assay was performed as described previously67,68 and flies of the genotype y w hs-FLP UAS–GFP.CD8; tub–GAL80 FRT40A/ Arpc1 FRT40A; tub–GAL4/ UAS-Dl were examined.
Immunohistochemistry
For conventional immunostaining, ovaries, wing discs from third instar larvae or pupal nota were dissected in PBS and fixed with 4% formaldehyde for 20 min. The samples were then permeabilized in PBS + 0.2% Triton X-100 (PBST) for 20 min and blocked with 5% normal donkey serum in PBST for 1 h. Samples were incubated with primary antibodies at 4 °C overnight. The following primary antibodies were used: chicken anti-GFP (1:2,000, Abcam), mouse anti-Cut (1:500; 2B10; Developmental Studies Hybridoma Bank, University of Iowa (DSHB))69, rat anti-ELAV (1:200; 7E8A10; DSHB)70, guinea pig anti-Sens (1:1,000; ref 71), mouse anti-DlECD (1:1,000; C594.9B; DSHB)72, guinea pig anti-Delta (1:3,000; M. Muskavitch and A. L. Parks)73, mouse anti-Fasciclin III (1:10; 7G10; DSHB)74, mouse anti-Hnt (1:10; 1G9; DSHB)75, Alexa Fluor 488- and 546-conjugated phalloidin (1 unit per reaction, Invitrogen), rabbit anti-Dlg (1:1,000; P. Bryant)76, rat anti-Myo1B (1:500; M.S. Mooseker)77. The following antibodies were used in the experiments included in the Supplementary Information: rabbit anti-Numb (1:1,000; Y. N. Jan)78, rabbit anti-Neuralized (1:600; E. C. Lai)65, rat anti-DE-Cadherin (1:1,000, DCAD2, DSHB)79, rabbit anti-Rab5 (1:200; M. González Gaitán)80, rabbit anti-Rab11 (1:1,000, D. F. Ready)81, guinea pig anti-Spinster/Benchwarmer (1:100; G. W. Davis)82, guinea pig anti-Hrs-FL (1:600; ref. 83).The samples were then incubated with Cy3- and/ or Cy5-conjugated affinity purified donkey secondary antibodies (1:500; Jackson ImmunoResearch Laboratories). Images were captured using an LSM510 confocal microscope and Leica TCS SP5 confocal microscope. Images were processed with Amira 5.0.1 and Adobe PhotoShop 7.0.
Transmission electron microscopy (TEM)
To identify the pIIa-pIIb cells, we used flies of the following genotype: UAS–CD2::HRP; neurA101-GAL4 (ref. 61). In this genotype the HRP-labelled cell membranes correspond to pIIa-pIIb at the 16–18 h APF time-point, as neurA101-GAL4 drives expression of the CD2::HRP in the SOP and its progeny. To identify the SOP progeny in Arp3 mutant clones for TEM analysis, we examined the flies with the genotype y w Ubx–FLP;UAS–-CD2::HRP; Arp3515FC FRT80B neurA101-GAL4/ arm-lacZ M(3) tub–GAL80 FRT80B in which the CD2::HRP is activated only in Arp3 mutant SOP progeny.
HRP label was visualized by TEM as described previously84 except for the following modifications: the pupal thorax was dissected at 18 h APF. After amplification and visualization of the HRP signal under a dissecting microscope, the tissues were fixed85 to preserve the actin filament structures. The tissues were then processed for TEM using microwave irradiation with PELCO BioWave equipped with PELCO Cold Spot and Vacuum System. Serial sections (60 nm) were cut and post-stained with Reynold’s lead citrate, and examined with a JEOL transmission electron microscope (JEOL 1010). The serial sections were labelled on the basis of their depth from the first electron micrograph that shows the most apical portion of HRP labelled SOP microvilli.
Immunoelectron microscopy of phalloidin
To label actin, the pupal thorax was dissected at 18 h APF, fixed in 1% glutaraldehyde in 0.1M PB pH 7.2 for 1.5 h, permeabilized in 0.1% Triton PBS for 5 min, labelled with biotin-XX phalloidin (3 units; Invitrogen) in PBS for 30–35 min. Samples were then incubated in streptavidin-HRP in TNT buffer (1:100; Sigma). To develop enzyme activity, we used a procedure described previously84.
Delta endocytosis and pulse-chase assay
The endocytosis and pulse-chase assays were modified from previous reports86,87. Pupae were partially dissected in Schneider’s medium at 18 h APF by making an incision along the dorsal side, and the internal tissues were washed out. The ‘empty’ pupal case was incubated with the supernatant of monoclonal antibody mouse anti-DeltaECD (1:10; C594.9B; DSHB)72 for 15–20 min on ice in Schneider’s medium supplemented with 25 µg ml−1 of 20-hydroxy-ecdysone (Sigma). The tissue was washed three times by medium changes. For the Delta pulse-chase assay the pupal cases were incubated at 25 °C for different time periods (0, 30 and 60 min) in Schneider’s medium supplemented with 5 µg ml−1 of 20-hydroxy-ecdysone. For the endocytosis assay, the pupal cases were incubated in pre-warmed Schneider’s medium supplemented with 5 µg ml−1 of 20-hydroxy-ecdysone at 34 °C in a water bath to inactivate the shibire gene in the negative control shits1. After incubation at 25 °C (pulse-chase assay) or 34 °C (endocytosis assay), the pupal cases were fixed for 20 min with 4% formaldehyde in Schneider’s medium supplemented with 5 µg ml−1 of 20-hydroxy-ecdysone. The normal immunostaining protocol was then followed.
The following antibodies were used in the experiments in the pulse-chase co-labelling experiments in the Supplementary Information: rabbit anti-Rab5 (1:200; M. González Gaitán)80, rabbit anti-Rab11 (1:1,000, D. F. Ready)81, guinea pig anti-Spinster/Benchwarmer (1:100; G. W. Davis)82, guinea pig anti-Hrs-FL (1:600; ref. 83).
Statistical analysis
Measurements of total number of Delta vesicles that traffic to the ARS 1 h after chase, and measurements of the total number of Delta vesicles endocytosed were analysed using a Student’s t-test (***P <0.0001. Measurements of the ARS area were quantified using the Measure function of the ImageJ software. The measurements were analysed using a Student’s t-test (***P <0.0001). For TEM, measurements of total number of microvilli in SOP and epithelial cells were quantified using ImageJ. The measurements were analysed using a Student’s t-test (P <0.05).
The measurement of Delta colocalization with Rab5 and Rab11 as well as the determination of Delta, Rab11 and Rab5 signal intensities were quantified using the labelvoxel and materialstatistics functions in Amira 5.0.1. The measurements were analysed using a Student’s t-test (*P =0.01).
Western blotting
For the Delta western blots, 50 embryos of the appropriate genotypes were collected at 0–13 h AEL and 13–19 hAEL and lysed in ice-cold filtered RIPA buffer (150 mM NaCl, 1.0% NP-40, 0.5% deoxycholic acid, 0.1% SDS, and 50 mM Tris, pH 8.0) with complete protease inhibitor cocktail (Roche). Lysates were suspended in equal volume of 3× Laemmli sample buffer in the absence of reducing agents, and proteins were resolved by SDS–PAGE. Delta was detected on a western blot using anti-Delta (mAb C594.9B) ascites fluid at 1:10,000. HRP-conjugated goat anti-mouse IgG (Jackson ImmunoResearch) was used at 1:10,000 and the blots were developed using Western Lightning chemilu-minescent substrate (PerkinElmer LAS).
Supplementary Material
ACKNOWLEDGEMENTS
We are grateful to W. Theurkauf, L. Cooley, E. Schejter, J. Skeath, D. F. Ready, P. Badenhorst, Y. N. Jan, P. Bryant, M. González Gaitán, G. Struhl, E. C. Lai, M. Muskavitch, A. L. Parks, F. B. Gertler, L. M. Lanier, J. Knoblich, F. Schweisguth, R. Dubreuil, W. Sullivan, M. S. Mooseker, G.M. Guild, the Bloomington Stock Center and the Developmental Studies Hybridoma Bank for reagents. We thank G. Emery for advice regarding the Delta endocytosis assay. We would like to thank H. Jafar-Nejad for suggestions and advice during the screen and comments on the manuscript. We thank P. Verstreken and C. V. Ly for their help with the screen, and R. Atkinson for advice on imaging. Confocal microscopy was supported by the BCM Mental Retardation and Developmental Disabilities Research Center. H.J.B. is an investigator of the Howard Hughes Medical Institute.
Footnotes
Note: Supplementary Information is available on the Nature Cell Biology website.
AUTHOR CONTRIBUTIONS
A.R., A.T. and H.B. conceived the project. A.R. and A.T. carried out the screen, mapped the genes and executed the project. K.S. was involved in the screen and mapping of the genes. C.M.H. in collaboration with A.R. and A.T. designed the TEM experiments and C.M.H. carried out the TEM experiments.
COMPETING INTERESTS
The authors declare that they have no competing financial interest.
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