Abstract
Progression of fertilized mammalian oocytes through cleavage, blastocyst formation and implantation depends on successful implementation of the developmental program, which becomes established during oogenesis. The identification of ooplasmic factors, which are responsible for successful embryo development, is thus crucial in designing possible molecular therapies for infertility intervention. However, systematic evaluation of molecular targets has been hampered by the lack of techniques for efficient delivery of molecules into embryos. We have developed an automated robotic microinjection system for delivering cell impermeable compounds into preimplantation embryos with a high post-injection survival rate. In this paper, we report the performance of the system on microinjection of mouse embryos. Furthermore, using this system we provide the first evidence that recombinant BCL-XL (recBCL-XL) protein is effective in preventing early embryo arrest imposed by suboptimal culture environment. We demonstrate that microinjection of recBCL-XL protein into early-stage embryos repairs mitochondrial bioenergetics, prevents reactive oxygen species (ROS) accumulation, and enhances preimplantation embryo development. This approach may lead to a possible treatment option for patients with repeated in vitro fertilization (IVF) failure due to poor embryo quality.
Introduction
According to the Centre for Disease Control, one in every eight North American couples seeks medical treatment for infertility. Embryo quality remains a strong determining factor for predicting the outcome of assisted reproductive technology (ART) [1]. Molecular defects responsible for failed preimplantation development are frequently attributed to poor oocyte quality of unknown etiology. Mathematical modeling of death rates in human preimplantation embryos has suggested that the factors predisposing an embryo to arrest are determined at or even before the zygote stage [2], [3]. The ability of the conceptus to pass through the transition from maternal to zygotic control in vitro has been proposed to be a function of the cytoplasmic components of the oocyte with minimal impact of the newly formed zygotic genome [4]. Thus, oocytes must possess cytoplasmic components which accumulate during oogenesis and support development through the blocking stage [5], and these components are lacking or non-functional in those embryos that arrest.
Ooplasm transfer experiments demonstrated that an unidentified ooplasmic factor(s) can prevent embryo arrest [6]. This pioneering work led to controversial clinical attempts to rescue human embryos with poor developmental potential by transferring ‘healthy’ donor ooplasm into recipient oocytes prone to abnormal development [7]. Such ooplasm transfers in humans were performed for patients with increased maternal age, repeated embryonic developmental failure or poor ovarian reserve, and have resulted in the birth of at least thirty children worldwide [8]. Unfortunately, transfer of ooplasm results in offspring carrying mitochondria from both the donor and recipient, thus creating mitochondrial heteroplasmy [9]. While benefits of this mitochondrial enrichment are clearly evident during the early developmental stages, mitochondrial heteroplasmy can have late physiological consequences [10]. Therefore, it is desirable to identify the molecular “culprits” responsible for suboptimal oocyte quality and devise molecular strategies for both fundamental research and treatment options.
Microinjection is a well established approach for introducing molecules into mammalian oocytes/embryos. High speed, high reproducibility, and high survival rate upon injection are critically important for testing the efficacy of potential molecular therapeutics. Due to the inherent difficulty of manipulating small-sized (∼100 µm), delicate mammalian embryos, conventional manual microinjection requires a long learning curve and suffers from low throughput.
The past decade has witnessed significant efforts to automate microinjection using robotic technologies [11], [12], [13], [14], [15], [16], [17], [18], and several robotic systems were demonstrated for assisting mouse embryo injection [11], [12], [18]. However, these robotic systems inherited the architecture directly from manual operation and only automated a few steps, while several difficult procedures (e.g., cell search, immobilization, and orientation) still must be conducted by a human operator with extensive training. Taking a different system architecture from manual operation and existing robotic systems, we have developed a novel robotic system that leverages motion control, computer vision microscopy, and micro device technology to achieve automated microinjection with high speed, reproducibility, and post-injection survival rate. This system employs microfabricated cell holding devices and vision-position-based control of multiple micropositioning devices to achieve easy sample immobilization, rapid cell orientation, and fast injection of mouse embryos. Technical aspects of the system were described previously [19], [20].
This paper reports the testing results of optimal system performance (e.g., injection speed and survival rate), based on the injection of a large number of mouse zygotes; and demonstrates a novel strategy for preventing early embryo arrest enabled by robotic microinjection of recombinant proteins into mouse zygotes. We provide the first quantitative evaluation of the efficacy of an anti-apoptotic recombinant protein BCL-XL (recBCL-XL) on rescuing early mouse embryos cultured in a suboptimal condition.
Results
Automated Microinjection of Mouse Zygotes
In contrast to conventional manual injection systems, our robotic system (Figure 1A) uses a microfabricated glass cell holding device (Figures 1C and S1A) to immobilize many mouse zygotes into a regular pattern (Figure S1C, Text S1, and Video S1). Switching from one cell to another for injection was greatly simplified and automatically performed via precise position control (Figures S2–S3, Text S1, and Video S2), dramatically enhancing the injection speed. A vision-based cell orientation control technique (Text S1) as well as an in-house developed motorized rotational stage (Figure 1A) was integrated into the robotic system for fast and automated cell orientation. A motorized micromanipulator (i.e., injection microrobot) was automatically controlled to inject mouse zygotes (Figure 1B and Video S2) in a high-speed manner with high repeatability.
During system development, 306 mouse zygotes were injected with PBS buffer by the robotic system. Through these trials, an injection speed of 200 µm/s and a retraction speed of 500 µm/s were experimentally determined to be optimal in terms of minimizing injection-induced cell lysis. In order to ensure viability of injected zygotes and investigate dose effects of the injected materials, deposition volume was accurately controlled (Figure 1E), achieved by fabricating injection micropipettes with a high consistency and precisely regulating the pressure unit output (Text S1). The resolution of material deposition volume was 1 femtoliter (fL).
To quantify system performance, the robotic system injected an additional 240 mouse zygotes with PBS buffer, demonstrating an average injection speed of 12 zygotes/min (vs. ∼2 zygotes/min in manual injection by highly skilled technicians, data provided by microinjection operators at the Toronto Center for Phenogenomics). Based on visual inspection right after injection, the robotic system achieved a low cell lysis rate (1.1%, Table 1). Developmental competence of microinjected embryos assessed by the rate of blastocyst formation (Table 1) in vitro after 96 hours in culture was 89±1.3% (mean ± s.e.m.), indicating minimal detrimental effect of robotic injection on embryo quality.
Table 1. Statistics of non-lysis and blastocyst formation rates of mouse embryos with PBS injection using the robotic system.
Experiments | 1 | 2 | 3 | 4 | 5 | 6 | 7 | Overall |
Number of injected embryos | 18 | 18 | 27 | 27 | 50 | 50 | 50 | 240 |
Number of surviving embryos (day 1.5) | 18 | 18 | 26 | 27 | 50 | 49 | 49 | 237 |
Number of blastocysts (day 4.5) | 16 | 15 | 24 | 23 | 46 | 45 | 44 | 213 |
Non-lysis rate (%) | 100 | 100 | 96.3 | 100 | 100 | 98 | 98 | 98.9±0.6 (mean±s.e.m.) |
Blastocyst formation (%) | 88.9 | 83.3 | 92.3 | 85.2 | 92 | 91.8 | 89.8 | 89±1.3 (mean±s.e.m.) |
The injected embryos were cultured in KSOM medium.
Due to the higher viscosity of the recombinant proteins (vs. PBS buffer), we next determined the need for increased size of microinjection pipettes. This modification increased the embryo lysis rates (20.3%; Figure 1F); however, the robotic system still provided significantly lower lysis rates than manual injection (37.7%; Figure 1F). There was no significant difference between the lysis rates of protein injection or buffer injection produced by robotic and manual microinjection. Thus, the robotic system has better performance in terms of cellular damage caused by microinjection. Automation enables users to operate the system without the long training needed for microinjection while achieving high injection consistency.
Culture induced developmental arrest
To use the system to address interesting questions in developmental biology, we focused on devising strategies for overcoming early embryo arrest. Outbred colonies of mice often exhibit compromised preimplantation embryo development in suboptimal culture conditions [21]. We first determined that human tubal fluid (HTF) medium, often used by in-vitro fertilization (IVF) clinics in the past, delays mouse preimplantation embryo development in vitro (Figures 2A and 2B). The HTF culturing model well recapitulates developmental arrest and was used to study the impact of ooplasmic transfer in the mouse model [22]. We and others have previously reported that embryos of suboptimal quality often exhibit altered expression levels of genes known to regulate cell death [23], [24]. In addition, females lacking Bcl-x (officially called Bcl2L1) in their oocytes exhibit decreased breeding performance that could not be attributed to a defect in ovarian reserve [25]. In order to determine whether altered levels of Bcl-2 family members accompany embryo arrest in the mouse, we explored if BCL-X protein levels changed in 2-cell stage mouse embryos due to culture in HTF medium.
Immunocytochemistry revealed ∼25% reduction of BCL-X protein expression in the embryos that were cultured for 24 hours in HTF in comparison to potassium simplex optimization medium (KSOM) (Figure 2C), most commonly used for in vitro culture of murine embryos. These results suggest that the depletion of BCL-X may contribute to poor embryo survival in the suboptimal culture conditions and may be one of the cytoplasmic factors responsible for improved embryo development observed during ooplasmic rescue.
Enhancing embryo development by automated microinjection of recBCL-XL (ΔTM)
Thus, we next attempted to transiently supplement BCL-X levels by microinjecting recBCL-XL (ΔTM) [26] into zygotes and to examine their in vitro developmental potential under an adverse culture condition (HTF). Injection of recBCL-XL (ΔTM) protein significantly improved preimplantation embryo development, when compared to buffer-injected, HTF-cultured embryos (p<0.001; Figure 3A). Rates of blastocyst formation, total cell number (TCN) and cell death index (CDI), which all reflect embryo quality, were restored by recBCL-XL (ΔTM) microinjection to levels comparable with embryos cultured in KSOM medium (Figure 3A and Figure 2). As a negative control, we also injected zygotes with BSA dissolved in microinjection buffer, and this did not significantly improve developmental rates (47%; n = 66) or embryo quality (TCN: 64±5.5%, CDI: 4.2±0.6; n = 13). These results show that microinjection of the recBCL-XL (ΔTM) protein is capable of restoring developmental competence and improving quality of embryos facing conditions of stress. Furthermore, there was no significant difference in studied outcomes if protein was delivered into the cytoplasm or pronucleus (Figure S4). As robotic microinjection resulted in lower lysis rates and a higher degree of consistency, all experiments described below were performed with robotic recBCL-XL (ΔTM) delivery into the cytoplasm.
Gametes and early mammalian embryos are susceptible to damage caused by excessive reactive oxygen species (reviewed in [27]). While reactive oxygen species (ROS) are key signaling molecules mediating basic cellular functions such as proliferation, differentiation and programmed death, excessive ROS production has been implicated in DNA damage, ATP depletion and permanent embryo arrest similar to that of cellular senescence [28]. As BCL-X has been previously shown to have antioxidant activities [29], we explored if BCL-X can increase developmental competence via preventing ROS accumulation.
HTF medium triggered excessive production/accumulation of ROS when compared to KSOM. Embryos microinjected with recBCL-XL (ΔTM) protein and maintained in HTF medium had significantly reduced ROS levels (Figure 3B). Supplementing HTF medium with BCL-X derived BH4 domain TAT-synthetic peptide was sufficient to maintain a physiological ROS profile (Figure S5). However, developmental competence of embryos maintained in medium supplemented with BH4 peptide was not restored. These results indicate that the BH4 domain can alleviate excessive ROS, but only full length BCL-X protein, albeit lacking the transmembrane region (BCL-XL(ΔTM)), is capable of effectively restoring the developmental quality of embryos.
Previous work in bovine embryos identified the adaptor protein p66SHC as a mediator of permanent embryo arrest. Developmentally compromised bovine embryos have been reported to exhibit higher p66SHC expression accompanied by elevated ROS levels, and knockdown of p66Shc significantly reduced the occurrence of permanent embryo arrest in the bovine model [30], [31]. Immunocytochemistry revealed that recBCL-XL (ΔTM) microinjection decreased expression of both total and activated (pSer-36) p66SHC (Figure 3C) protein. As the P-p66SHC isoform has been shown to enter mitochondria and contribute to hydrogen peroxide release into the cytosol, decreased expression of p66SHC/Ser-36, particularly in the mitochondria, was accompanied by lower ROS levels in recBCL-XL (ΔTM) microinjected embryos.
Suboptimal culture conditions may result in both excessive ROS production and the alteration of embryo metabolism. BCL-X, in addition to its anti-apoptotic role, has also been implicated in mitochondrial biogenesis [32] and the regulation of mitochondrial metabolism [33]. Therefore, we next explored whether mitochondrial distribution, an indicator of embryo health [34], [35], can be altered by culture conditions. As anticipated, embryos cultured in HTF medium exhibit altered sub-cellular distribution of mitochondria in comparison to KSOM (Figure S6). Furthermore, this distribution was corrected by recBCL-XL (ΔTM) microinjection (Figure 4A), indicating that this Bcl-2 family member is capable of maintaining the correct cellular mitochondrial network in developing embryos.
We have also explored mitochondrial copy number (mtDNA content), mitochondrial activity (Mitotracker intensity) as well as mitochondrial membrane potential (JC-1 ratio). However, none of these parameters was affected by culture conditions or by BCL-X microinjection (data not shown). Finally, we investigated if recBCL-XL (ΔTM) microinjection can affect the metabolism of preimplantation embryos. Early embryos are not capable of glycolysis and rely on oxidative phosphorylation to sustain their energy demands. With development, they progressively gain the ability to utilize glucose [36]. Autofluorescent signals, reflecting cellular content of reduced NAD(P)H and oxidized FAD were significantly decreased in embryos upon microinjection of recBCL-XL(ΔTM) protein with concomitant increase in the citrate/ATP ratio (Figure 4B). Thus, BCL-X at the 2-cell stage modulates mitochondrial output, with outcomes indicating more efficient Krebs cycle metabolism and carbohydrate utilization.
Expression of BCL-X in human oocytes
While experiments described above dealt with in vitro induced phenotype, they have clinical relevance to human IVF, where embryos are always maintained in culture for at least 3 days. In addition, it is also possible that some oocytes may lack sufficient storage of maternally derived Bcl-x gene products. In order to determine if variability in the endowment of maternally accumulated BCL-X transcripts could contribute to poor quality of human embryos in patients undergoing IVF, we analyzed its expression in human oocytes. As we have previously observed that Bcl-x transcript expression peaks in germinal vesicle (GV) stage of mouse oocytes, followed by dramatic decline in metaphase II stage [23], we used only human GV and metaphase I (MI) arrested oocytes. The GV and MI oocytes were analyzed separately. Within the cohort of oocytes obtained from patients undergoing infertility treatment, 6/72 GV and 14/65 MI oocytes failed to express detectable levels of BCL-X transcripts. An additional sub-group of oocytes (8 at GV stage) expressed reduced levels (less than mean) of BCL-X transcripts (Figure 5A). These data indicate that ∼20% of human growing oocytes obtained from infertile patients either completely lack or possess diminished endowment of BCL-X transcripts.
We next analyzed a possible link between BCL-X and genes known to be significantly deregulated in human arrested or fragmented embryos by considering known physical protein-protein interactions from the I2D database. These targets included genes ZAR1, YBX2, SYMPK, CPEB1, TARBP2, DICER1, DGCR8, MYLC2, ECT2, DIAPH1, CFL1, NELF, BTF3, IGFR2, YY1, TERT, DNMT3B, CTNNB1, HRK, BCL-XS, BCL2L10, P27KIP1 [23], [24], [37], [38], [39]. The resulting protein interaction network comprises 1,810 proteins and 20,562 interactions. Thick edges represent direct interactions among 22 up- and down-regulated genes/proteins. Thin, light grey edges link BCL-X (BCL2L1) with the up- and down-regulated genes, via 25 additional protein partners (small circles). On the left side are proteins that mostly link to down-regulated genes. EP300 is linked to both up- and down-regulated targets, while CASP8 is most linked to up-regulated genes (Figure 5B). This network highlights how lack of BCL-X may be connected with targets known to be differentially expressed in arrested embryos.
Discussion
Enabled by the microfabricated embryo holding devices and vision-position based control of multiple motion control devices, the robotic mouse embryo injection system is capable of fast immobilization, switching, orientation, and injection of mouse embryos. The automated system requires minimal human involvement (i.e., a few computer mouse clicks), and is therefore, independent of operator skills, enabling the acquisition of large-scale molecule testing data with a high reproducibility. The robotic system performed microinjection of mouse zygotes at a speed of 12 zygotes/min, six times the speed of manual injection (∼2 zygotes/min). High accuracy and consistency of the robotic system produced lower cell lysis rates and higher blastocyst formation rates than proficient microinjection technicians. Except the micro devices for immobilizing embryos and the motorized rotational stage for orienting cells, the automated system contains no other custom developed components and presents no difference in hardware compared to a conventional microinjection system, which is an advantage promising its use in biology laboratories and mouse core facilities. The robotic cell manipulation technology presented here can also be adapted with further technological modifications and applied to other cell micromanipulation tasks, for instance, intracytoplasmic sperm injection (ICSI) and nuclear transfer procedures.
Our experimental results suggest that embryo arrest caused by suboptimal culture conditions is mostly driven by inefficient metabolism, in part due to decreased Bcl-x expression triggered by as yet unknown mechanisms. However, this altered cellular milieu can be restored by the microinjection of recombinant BCL-X protein, which repairs mitochondrial bioenergetics, prevents ROS accumulation, and facilitates the development of preimplantation mouse embryos. These effects start to become apparent at the 2-cell stage, and the consequences are still evident in the blastocyst stage (higher cell number and lower cell death rate; Figure 3A). While Bcl-x deletion causes midgestational embryonic lethality mostly due to defects in neuronal and hematopoietic lineages [40], its haplo-insufficiency triggers ovarian follicle loss, which became obvious with aging [41]. However, deletion of Bcl-x in follicles (oocyte and granulosa cells) did not compromise ovarian reserve in young age, but did result in decreased fertility of females [25].
We have previously shown that Bcl-x is maternally deposited into the oocytes, but becomes upregulated, likely from embryonic genome, at the late 1-cell stage [25]. In addition, some human as well as murine fragmenting early embryos alter splicing of Bcl-x gene, producing pro-apoptotic Bcl-xS isoform [24], [25]. We have recently shown that blastocysts do not require Bcl-xL for their survival, as downregulation of this isoform at the morula stage did not affect blastocyst quality. However, downregulation of Bcl-xL with concomitant induction of Bcl-xS had detrimental developmental consequences, as these blastocysts contain fewer cells and suffer from increased oxidative stress [42]. Data from the current study, however, point to a dependency on BCL-X during the critical window of transition from maternal to embryonic control, at the 2-cell stage.
The mechanism by which BCL-X promotes survival of 2-cell embryos does not appear to involve suppression of apoptosis, but rather points to the regulation of mitochondrial metabolism. These findings are consistent with previously published results in yeast and mammalian cell lines, which proposed that BCL-X can regulate a metabolic switch from glycolysis to oxidative phosphorylation [33], and can also maintain metabolite passage and activity of VDAC under conditions of stress [43], [44]. BCL-X and other BCL-2 family members had also been shown to dynamically remodel the mitochondrial network (e.g., fission and fusion; reviewed in [45]). Thus, changes in mitochondrial distribution without the effect on mitochondrial DNA copy number observed in recBCL-XL microinjected embryos, are not surprising.
Intriguing is, however, the connection between phosphorylation of p66SHC and BCL-X protein levels. It is presently unknown how BCL-X influences the phosphorylation of p66SHC, besides regulating ROS levels. Suppression of apoptosis by BCL-2 and BCL-XL can be attributed to protection against ROS and/or a shift of the cellular redox potential to a more reduced state [46]. Paradoxically, an elevated release of hydrogen peroxide was observed from BCL-XL overexpressing mitochondria, which led to an enhanced cellular antioxidant defense and superior protection against death [47]. It is also possible that dual crosstalk exists between BCL-X and p66SHC as previous work revealed that ablation of p66SHC increased expression of BCL-XL [48]. However, our data point to an additional role of BCL-X besides ROS safeguarding. While suboptimal culture clearly triggered oxidative stress, it is unlikely that ROS is the sole reason behind early embryo arrest, as BH4 peptide could alleviate the ROS accumulation, but could not support further embryo development. Likely, a combined role in mitochondrial metabolism with physiological ROS maintenance facilitates the viability of early embryos.
We have also attempted to explore if microinjection of recBCL-XL protein could have a clinical relevance. Expression screen of oocytes from infertile patients revealed variability in the BCL-X endowment. Within the cohort of freshly collected immature human oocytes, one-fifth either lacked or expressed lower amounts of BCL-X transcripts. However, the level of BCL-X did not correlate with clinical parameters such as patient infertility diagnosis, maternal age, stimulation protocol as well as pregnancy outcome (data not shown). We observed that oocytes from the same patient would be variably affected, indicating that not all oocytes are created equal and likely would not equally well support preimplantation embryo development. We speculate that embryos conceived from oocytes lacking BCL-X would be incapable of progression through preimplantation development and would arrest during in vitro culture. As we did not assess expression of BCL-X in the transferred embryos, this may explain the lack of BCL-X correlation with pregnancy outcome. Nonetheless, microinjection of recBCL-XL could have potential use during IVF treatment, particularly for cases where patients experience repeated IVF failure due to poor embryo quality.
Microinjection of recombinant mitochondrial proteins is capable of improving the developmental competence of embryos without genetic alterations in the offspring, a problematic factor of ooplasmic transfer. In contrast to mitochondrial heteroplasmy that results from ooplasmic transfer, the recombinant form of the BCL-X protein has a terminal half-life. Therefore, its addition to the embryos is aimed at providing transient support during the time that embryos are most susceptible to demise without resulting in permanent genetic modifications of the offspring. Further screening of additional protein targets using the automated microinjection technique could lead to the selection of the most efficacious proteins for improving embryo survival.
Materials and Methods
Ethics Statement
All mouse experiments were performed in accordance with Canadian Council on Animal Care (CCAC) guidelines for Use of Animals in Research and Laboratory Animal Care under protocols (permit or protocol #:AUP0015) approved by the animal care committees at Mount Sinai Hospital (MSH), Toronto and Toronto Centre for Phenogenomics (TCP). Single immature human oocytes at germinal vesicle or metaphase I stage were donated to research after obtaining patient consent approval in writing, which was approved by the Research Ethics Board at Mount Sinai Hospital, Toronto.
Mouse Embryo Collection and Culture
The collection and culture conditions of mouse embryos are described in the Supporting Methods (Text S1).
Manual and Robotic Microinjection
The workstation for manual microinjection consisted of an inverted microscope equipped with differential interference contrast (DIC) optics (Leica Microsystems, Wetzlar, Germany). Microinjection pipettes were backloaded and connected to a microinjector (FemtoJet; Eppendorf, Hamburg Germany). Holding pipettes (100 µm O.D., 30 µm I.D.) were prepared on a microforge (DeFonbrune) from 1.0 mm O.D.×0.75 mm I.D. borosilicate glass capillaries (FHC 27-30-0) and connected to a manually controlled oil-based holding syringe system (Narishige, Japan). Mouse zygotes with visible pronuclei were selected for microinjection. All the zygotes were injected within the time window of 1–3 hr post-collection.
Detailed description of the robotic microinjection system design and operation is provided in the Supporting Methods (Text S1) and Videos.
Measurement of Reactive Oxygen Species (ROS) Content
In the experiments, ROS content of the injected and un-injected embryos was measured at the 2-cell stage. The level of ROS content was quantified using the dichlorodihydrofluorescein diacetate (DCHFDA, Molecular Probes, Invitrogen, Carlsbad, CA, USA) method as previously described [49]. Live imaging and quantitation were conducted on a deconvolution microscope (Olympus IX70, Applied Precision Inc. Issaquah, WA, USA) using an image analysis program (SoftwoRx, Applied Precision Inc., Issaquah, WA, USA).
Immunocytochemistry for pSHC and BCL-X
Embryos, fixed with 10% formalin, were incubated overnight with appropriate primary antibody, rabbit anti-SHC (BD Transduction laboratories), mouse anti-SHC/phospho S36 antibody (Abcam) or rabbit anti mouse BCL-X (Santa Cruz, CA). After washing, embryos were incubated with appropriate secondary antibodies. Following a 15 minute counterstain with DAPI, embryos were mounted and imaged on a deconvolution microscope (Olympus IX70; Applied Precision Inc., Issaquah, WA, USA), and relative fluorescence in each image was quantitated as described above.
Metabolic Assays and Mitochondrial Labeling (Mitotracker)
Microanalytical metabolic assay for ATP and citrate levels were performed as previously described [50]. Live embryos were stained with Mitotracker Red (Molecular Probes, Invitrogen, Carlsbad, CA, USA) at a final concentration of 200 µM. Embryos were then imaged on a deconvolution microscope (Olympus IX70, Applied Precision Inc., Issaquah, WA, USA) under the TRITC filter. NAD(P)H and FAD autofluorescence of the embryos were also imaged under DAPI and FITC filters, respectively as previously described [51]. Quantitation of the mitochondrial DNA copy number and mitochondrial membrane potential (JC-1, Molecular probes, Invitrogen, Carlsbad, CA, USA) labeling was performed as previously described [34] and distribution was evaluated as outlined in Supporting Methods (Text S1).
Network Analysis and Visualization
Genes reported to be differentially expressed in human arrested or fragmented embryos, were chosen based on previous publications [23], [24], [37], [38], [39]. These gene targets were mapped to proteins and used to assess connectivity to BCL-X using the known, physical protein-protein interactions. Network was generated by querying I2D database Version 1.95 [52], [53]. Network visualization was performed in NAViGaTOR 2.2 ([54], [55]).
Statistical Analysis
Data were presented as mean ± s.e.m. and analyzed using either student's t-test, Mann-Whitney U-test, or Kruskal Wallis test followed by Dunn's post test (SigmaStat 3.5, Systat Software Inc.), as appropriate. For patient data analysis, Pearson correlation was used for maternal age and Anova on Ranks for patient diagnosis, hormonal stimulation and pregnancy outcome. All the statistical analyses were performed using SigmaStat 3.5 (Systat Software Inc.).
Supporting Information
Acknowledgments
The authors would like to thank Dr. Don Newmeyer for donation of recBCL-XL (ΔTM) protein and Linda Wei for advice and training with manual microinjection setup. In addition, we would like to express our gratitude to the team of embryologists and nursing staff of Mount Sinai Hospital for help with collecting human samples, and to those patients for donations of immature oocytes.
Footnotes
Competing Interests: The authors have declared that no competing interests exist.
Funding: This work was supported by the Grants from Canadian Institutes of Health Research to AJ and RFC (CIHR MOP 14058, 84328 and research grant from Ferring), Natural Sciences and Engineering Research Council and the Canada Foundation for Innovation to IJ (NSERC #104105, CFI #12301 and CFI #203383) and AJ (CFI#203771), Natural Sciences and Engineering Research Council and Ontario Ministry of Research and Innovation to YS (NSERC #458099, MRI #482193) and the National Institutes of Health to KHM (NIH HD040390 and HD065435). IJ, YS and AJ are supported by the Canada Research Chairs Program. XYL was supported by the Ontario Graduate Scholarship Program. The funders had no role in study design, data collection and analysis, decision to publish, or preparation of the manuscript.
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