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Acta Crystallographica Section E: Structure Reports Online logoLink to Acta Crystallographica Section E: Structure Reports Online
. 2011 Jun 25;67(Pt 7):o1817. doi: 10.1107/S1600536811023968

Propane-1,2-diaminium bis­(4-meth­oxy­benzoate)

Zong-Ling Ru a,*
PMCID: PMC3151787  PMID: 21837186

Abstract

The asymmetric unit of the title salt, C3H12N2 2+·2C8H7O3 , contains two 4-meth­oxy­benzoate anions and one propane-1,2-diaminium cation. All the amino H atoms of the cation are involved in N—H⋯O hydrogen bonds with the carboxyl­ate O atoms of the anions.

Related literature

For related amide-acid co-crystal compounds, see: Almarsson & Zaworotko (2004); Blagden et al. (2008); Vishweshwar et al. (2006); Kapildev et al. (2011); Schultheiss & Newman (2009).graphic file with name e-67-o1817-scheme1.jpg

Experimental

Crystal data

  • C3H12N2 2+·2C8H7O3

  • M r = 378.42

  • Monoclinic, Inline graphic

  • a = 13.847 (3) Å

  • b = 11.296 (2) Å

  • c = 12.893 (3) Å

  • β = 92.38 (3)°

  • V = 2014.8 (7) Å3

  • Z = 4

  • Mo Kα radiation

  • μ = 0.09 mm−1

  • T = 298 K

  • 0.30 × 0.05 × 0.05 mm

Data collection

  • Rigaku Mercury2 diffractometer

  • 20478 measured reflections

  • 4611 independent reflections

  • 2264 reflections with I > 2σ(I)

  • R int = 0.116

Refinement

  • R[F 2 > 2σ(F 2)] = 0.073

  • wR(F 2) = 0.194

  • S = 1.03

  • 4611 reflections

  • 244 parameters

  • H-atom parameters constrained

  • Δρmax = 0.16 e Å−3

  • Δρmin = −0.26 e Å−3

Data collection: CrystalClear (Rigaku, 2005); cell refinement: CrystalClear; data reduction: CrystalClear; program(s) used to solve structure: SHELXTL (Sheldrick, 2008); program(s) used to refine structure: SHELXTL; molecular graphics: SHELXTL; software used to prepare material for publication: SHELXTL.

Supplementary Material

Crystal structure: contains datablock(s) I, global. DOI: 10.1107/S1600536811023968/xu5245sup1.cif

e-67-o1817-sup1.cif (25.8KB, cif)

Structure factors: contains datablock(s) I. DOI: 10.1107/S1600536811023968/xu5245Isup2.hkl

e-67-o1817-Isup2.hkl (225.9KB, hkl)

Supplementary material file. DOI: 10.1107/S1600536811023968/xu5245Isup3.cml

Additional supplementary materials: crystallographic information; 3D view; checkCIF report

Table 1. Hydrogen-bond geometry (Å, °).

D—H⋯A D—H H⋯A DA D—H⋯A
N1—H1A⋯O4i 0.90 1.82 2.696 (3) 162
N1—H1B⋯O1 0.90 1.92 2.791 (3) 162
N1—H1C⋯O1ii 0.90 1.89 2.777 (3) 167
N2—H2A⋯O5iii 0.90 1.82 2.718 (3) 173
N2—H2B⋯O4iv 0.90 2.03 2.917 (3) 170
N2—H2C⋯O2ii 0.90 1.81 2.703 (3) 1670

Symmetry codes: (i) Inline graphic; (ii) Inline graphic; (iii) Inline graphic; (iv) Inline graphic.

Acknowledgments

This work was supported by the start-up fund of Anyang Institute of Technology, China.

supplementary crystallographic information

Comment

Molecular cocrystals are becoming increasingly important within the pharmaceutical industry as an alternative source of new solid crystalline materials with the potential to provide optimal physical properties whilst retaining the chemical properties of the cocrystal components (Almarsson & Zaworotko, 2004; Blagden et al., 2008; Vishweshwar et al., 2006). Physicochemical properties such as the melting point, stability and solubility of an active pharmaceutical ingredient can be tuned through cocrystal formulation (Kapildev et al., 2011; Schultheiss & Newman, 2009). Cocrystal synthesis often relies on the acid-amide H-bonds interactions. Herein, we report the crystal structure of the title compound, propane-1,2-diaminium di-4-methoxybenzoate.

The asymmetric unit is composed of two 4-methoxybenzoate anions and one propane-1,2-diaminium cation (Fig. 1). Both the amine N atoms were protonated. And the carboxyl groups were deprotonated. The geometric parameters of the title compound are in the normal range.

In the crystal structure, all the amino H atoms are involved in N—H···O hydrogen bonds with the carboxyl O atoms (Table 1 and Fig. 2).

Experimental

A mixture of R-propane-1,2-diamine (1.0 mmol), 4-methoxybenzoic acid (2.0 mmol) and 20 ml ethanol were added into a 50 ml flask and refluxed for 5 h, then cooled and filtrated. The solution was evaporated slowly in the air. Colorless block crystals suitable for X-ray analysis were obtained after one week. The R-propane-1,2-diamine turned into racemic amine in the heating process.

Refinement

All H atoms attached to C atoms were fixed geometrically and treated as riding with C—H = 0.98 (methine), 0.97 (methylene), 0.96 (methyl) and 0.93 Å (aromatic), Uiso(H) = 1.2Ueq(C except methyl) and Uiso(H) = 1.5Ueq(C of methyl). The amino H atoms were placed in calculated positions and refined in riding mode with Uiso(H) = 1.5Ueq(N).

Figures

Fig. 1.

Fig. 1.

Molecular view of the title compound with the atomic numbering scheme. Displacement ellipsoids are drawn at the 30% probability level.

Fig. 2.

Fig. 2.

The crystal packing of the title compound viewed along the b axis showing the two-dimensional hydrogen bondings network (dashed line). Hydrogen atoms not involved in hydrogen bonding have been omitted for clarity.

Crystal data

C3H12N22+·2C8H7O3 F(000) = 808
Mr = 378.42 Dx = 1.247 Mg m3
Monoclinic, P21/c Mo Kα radiation, λ = 0.71073 Å
Hall symbol: -P 2ybc Cell parameters from 4611 reflections
a = 13.847 (3) Å θ = 3.2–27.5°
b = 11.296 (2) Å µ = 0.09 mm1
c = 12.893 (3) Å T = 298 K
β = 92.38 (3)° Block, colorless
V = 2014.8 (7) Å3 0.30 × 0.05 × 0.05 mm
Z = 4

Data collection

Rigaku Mercury2 diffractometer 2264 reflections with I > 2σ(I)
Radiation source: fine-focus sealed tube Rint = 0.116
graphite θmax = 27.5°, θmin = 3.2°
Detector resolution: 13.6612 pixels mm-1 h = −17→17
CCD profile fitting scans k = −14→14
20478 measured reflections l = −16→16
4611 independent reflections

Refinement

Refinement on F2 Primary atom site location: structure-invariant direct methods
Least-squares matrix: full Secondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.073 Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.194 H-atom parameters constrained
S = 1.03 w = 1/[σ2(Fo2) + (0.0691P)2 + 0.210P] where P = (Fo2 + 2Fc2)/3
4611 reflections (Δ/σ)max < 0.001
244 parameters Δρmax = 0.16 e Å3
0 restraints Δρmin = −0.26 e Å3

Special details

Geometry. All esds (except the esd in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell esds are taken into account individually in the estimation of esds in distances, angles and torsion angles; correlations between esds in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell esds is used for estimating esds involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > 2sigma(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.

Fractional atomic coordinates and isotropic or equivalent isotropic displacement parameters (Å2)

x y z Uiso*/Ueq
O1 0.58273 (13) 0.11367 (16) 0.42325 (14) 0.0557 (5)
O4 1.40303 (14) 0.20038 (18) 1.12055 (15) 0.0653 (6)
O5 1.37392 (14) 0.05243 (18) 1.01087 (14) 0.0620 (6)
N1 0.50945 (15) 0.09975 (19) 0.62133 (15) 0.0498 (6)
H1A 0.4635 0.1562 0.6181 0.075*
H1B 0.5442 0.1111 0.5647 0.075*
H1C 0.4780 0.0300 0.6173 0.075*
C10 1.28462 (19) 0.2302 (2) 0.9837 (2) 0.0501 (7)
O2 0.67887 (14) 0.0757 (2) 0.29455 (15) 0.0690 (6)
N2 0.46696 (16) −0.00178 (19) 0.83553 (16) 0.0512 (6)
H2A 0.4327 0.0114 0.8922 0.077*
H2B 0.5128 −0.0577 0.8457 0.077*
H2C 0.4235 −0.0264 0.7863 0.077*
C2 0.73928 (19) 0.2000 (2) 0.4300 (2) 0.0467 (7)
C1 0.6619 (2) 0.1256 (2) 0.3787 (2) 0.0477 (7)
C9 1.3588 (2) 0.1555 (3) 1.0418 (2) 0.0535 (7)
O3 0.95714 (15) 0.3848 (2) 0.59171 (17) 0.0752 (7)
C7 0.7231 (2) 0.2669 (2) 0.5179 (2) 0.0520 (7)
H7A 0.6613 0.2694 0.5432 0.062*
C18 0.57151 (19) 0.1152 (3) 0.7178 (2) 0.0536 (8)
H18A 0.6003 0.1942 0.7140 0.064*
O6 1.08060 (18) 0.4243 (2) 0.81081 (19) 0.0930 (8)
C6 0.7958 (2) 0.3295 (3) 0.5685 (2) 0.0584 (8)
H6A 0.7825 0.3749 0.6264 0.070*
C14 1.1855 (2) 0.4049 (3) 0.9672 (3) 0.0634 (8)
H14A 1.1651 0.4766 0.9943 0.076*
C3 0.8322 (2) 0.2004 (3) 0.3933 (2) 0.0578 (8)
H3A 0.8447 0.1583 0.3333 0.069*
C19 0.5112 (2) 0.1142 (2) 0.8128 (2) 0.0538 (7)
H19A 0.5516 0.1382 0.8723 0.065*
H19B 0.4601 0.1725 0.8034 0.065*
C4 0.9066 (2) 0.2618 (3) 0.4437 (2) 0.0621 (8)
H4A 0.9683 0.2608 0.4177 0.074*
C15 1.2534 (2) 0.3372 (3) 1.0210 (2) 0.0556 (8)
H15A 1.2790 0.3645 1.0844 0.067*
C11 1.2458 (2) 0.1912 (3) 0.8880 (2) 0.0610 (8)
H11A 1.2658 0.1192 0.8612 0.073*
C5 0.8888 (2) 0.3252 (3) 0.5335 (2) 0.0578 (8)
C13 1.1480 (2) 0.3652 (3) 0.8723 (3) 0.0643 (8)
C12 1.1784 (2) 0.2581 (3) 0.8329 (2) 0.0695 (9)
H12A 1.1532 0.2313 0.7691 0.083*
C8 1.0557 (2) 0.3755 (3) 0.5628 (3) 0.0838 (11)
H8A 1.0963 0.4209 0.6101 0.126*
H8B 1.0616 0.4054 0.4936 0.126*
H8C 1.0754 0.2940 0.5653 0.126*
C17 0.6536 (2) 0.0284 (3) 0.7205 (3) 0.0834 (11)
H17A 0.6934 0.0407 0.7823 0.125*
H17B 0.6915 0.0397 0.6606 0.125*
H17C 0.6284 −0.0508 0.7203 0.125*
C16 1.0508 (3) 0.5392 (4) 0.8406 (3) 0.1064 (14)
H16A 1.0038 0.5689 0.7902 0.160*
H16B 1.1057 0.5911 0.8443 0.160*
H16C 1.0227 0.5352 0.9073 0.160*

Atomic displacement parameters (Å2)

U11 U22 U33 U12 U13 U23
O1 0.0547 (12) 0.0615 (13) 0.0513 (11) −0.0116 (10) 0.0062 (10) −0.0012 (9)
O4 0.0720 (14) 0.0648 (13) 0.0573 (12) −0.0055 (11) −0.0173 (10) −0.0007 (11)
O5 0.0738 (14) 0.0605 (13) 0.0516 (12) 0.0096 (11) 0.0034 (10) −0.0024 (11)
N1 0.0553 (14) 0.0550 (14) 0.0392 (12) −0.0071 (11) 0.0029 (11) −0.0012 (11)
C10 0.0513 (17) 0.0542 (18) 0.0448 (15) −0.0003 (14) 0.0028 (13) −0.0006 (14)
O2 0.0651 (14) 0.0942 (16) 0.0480 (12) −0.0191 (11) 0.0073 (10) −0.0194 (11)
N2 0.0559 (14) 0.0587 (15) 0.0387 (12) −0.0003 (12) −0.0003 (11) −0.0010 (11)
C2 0.0501 (17) 0.0468 (16) 0.0430 (15) −0.0013 (13) −0.0011 (13) 0.0056 (13)
C1 0.0533 (18) 0.0490 (17) 0.0405 (16) −0.0041 (14) −0.0017 (14) 0.0079 (13)
C9 0.0532 (18) 0.066 (2) 0.0416 (16) −0.0069 (16) 0.0064 (14) 0.0029 (15)
O3 0.0579 (14) 0.0904 (17) 0.0763 (15) −0.0086 (12) −0.0097 (11) −0.0223 (13)
C7 0.0525 (17) 0.0523 (17) 0.0513 (16) 0.0005 (14) 0.0048 (14) 0.0006 (14)
C18 0.0538 (18) 0.0624 (19) 0.0442 (16) −0.0064 (15) −0.0028 (14) 0.0030 (14)
O6 0.0970 (18) 0.0944 (18) 0.0850 (17) 0.0279 (15) −0.0254 (14) 0.0055 (14)
C6 0.061 (2) 0.0561 (18) 0.0574 (18) 0.0016 (15) −0.0010 (16) −0.0108 (15)
C14 0.059 (2) 0.0568 (19) 0.074 (2) 0.0010 (16) 0.0023 (17) −0.0053 (17)
C3 0.0562 (19) 0.070 (2) 0.0472 (16) −0.0062 (16) 0.0072 (14) −0.0060 (15)
C19 0.0635 (18) 0.0525 (18) 0.0447 (16) −0.0050 (14) −0.0041 (14) −0.0028 (14)
C4 0.0476 (17) 0.081 (2) 0.0580 (18) −0.0044 (16) 0.0071 (15) −0.0069 (17)
C15 0.0541 (18) 0.0596 (19) 0.0526 (17) −0.0054 (15) −0.0050 (14) −0.0059 (15)
C11 0.0656 (19) 0.067 (2) 0.0497 (17) 0.0071 (16) −0.0064 (15) −0.0097 (16)
C5 0.0551 (19) 0.0623 (19) 0.0549 (18) −0.0030 (15) −0.0094 (15) −0.0046 (15)
C13 0.060 (2) 0.064 (2) 0.068 (2) 0.0044 (16) −0.0051 (17) 0.0044 (18)
C12 0.077 (2) 0.077 (2) 0.0534 (18) 0.0050 (18) −0.0186 (17) −0.0039 (17)
C8 0.056 (2) 0.102 (3) 0.092 (3) −0.0092 (19) −0.0091 (18) −0.018 (2)
C17 0.066 (2) 0.109 (3) 0.076 (2) 0.021 (2) 0.0092 (18) 0.022 (2)
C16 0.105 (3) 0.093 (3) 0.121 (3) 0.047 (2) −0.004 (3) 0.013 (3)

Geometric parameters (Å, °)

O1—C1 1.266 (3) O6—C16 1.420 (4)
O4—C9 1.269 (3) C6—C5 1.383 (4)
O5—C9 1.250 (3) C6—H6A 0.9300
N1—C18 1.492 (3) C14—C15 1.377 (4)
N1—H1A 0.9004 C14—C13 1.384 (4)
N1—H1B 0.9002 C14—H14A 0.9300
N1—H1C 0.9004 C3—C4 1.381 (4)
C10—C15 1.377 (4) C3—H3A 0.9300
C10—C11 1.396 (4) C19—H19A 0.9700
C10—C9 1.505 (4) C19—H19B 0.9700
O2—C1 1.253 (3) C4—C5 1.393 (4)
N2—C19 1.481 (3) C4—H4A 0.9300
N2—H2A 0.9003 C15—H15A 0.9300
N2—H2B 0.9006 C11—C12 1.375 (4)
N2—H2C 0.9005 C11—H11A 0.9300
C2—C7 1.387 (4) C13—C12 1.385 (4)
C2—C3 1.390 (4) C12—H12A 0.9300
C2—C1 1.495 (4) C8—H8A 0.9600
O3—C5 1.362 (3) C8—H8B 0.9600
O3—C8 1.434 (3) C8—H8C 0.9600
C7—C6 1.372 (4) C17—H17A 0.9600
C7—H7A 0.9300 C17—H17B 0.9600
C18—C17 1.500 (4) C17—H17C 0.9600
C18—C19 1.511 (4) C16—H16A 0.9600
C18—H18A 0.9800 C16—H16B 0.9600
O6—C13 1.372 (4) C16—H16C 0.9600
C18—N1—H1A 109.7 C2—C3—H3A 119.2
C18—N1—H1B 110.5 N2—C19—C18 114.4 (2)
H1A—N1—H1B 105.2 N2—C19—H19A 108.6
C18—N1—H1C 114.2 C18—C19—H19A 108.6
H1A—N1—H1C 106.1 N2—C19—H19B 108.6
H1B—N1—H1C 110.6 C18—C19—H19B 108.6
C15—C10—C11 118.1 (3) H19A—C19—H19B 107.6
C15—C10—C9 122.4 (3) C3—C4—C5 119.6 (3)
C11—C10—C9 119.5 (3) C3—C4—H4A 120.2
C19—N2—H2A 104.5 C5—C4—H4A 120.2
C19—N2—H2B 110.8 C10—C15—C14 121.9 (3)
H2A—N2—H2B 113.0 C10—C15—H15A 119.0
C19—N2—H2C 113.8 C14—C15—H15A 119.0
H2A—N2—H2C 105.3 C12—C11—C10 120.8 (3)
H2B—N2—H2C 109.3 C12—C11—H11A 119.6
C7—C2—C3 117.4 (3) C10—C11—H11A 119.6
C7—C2—C1 122.1 (2) O3—C5—C6 116.0 (3)
C3—C2—C1 120.5 (3) O3—C5—C4 124.7 (3)
O2—C1—O1 122.8 (3) C6—C5—C4 119.3 (3)
O2—C1—C2 118.7 (2) O6—C13—C14 125.1 (3)
O1—C1—C2 118.5 (2) O6—C13—C12 115.0 (3)
O5—C9—O4 123.1 (3) C14—C13—C12 119.9 (3)
O5—C9—C10 118.9 (3) C11—C12—C13 120.0 (3)
O4—C9—C10 118.1 (3) C11—C12—H12A 120.0
C5—O3—C8 117.9 (2) C13—C12—H12A 120.0
C6—C7—C2 122.0 (3) O3—C8—H8A 109.5
C6—C7—H7A 119.0 O3—C8—H8B 109.5
C2—C7—H7A 119.0 H8A—C8—H8B 109.5
N1—C18—C17 110.7 (2) O3—C8—H8C 109.5
N1—C18—C19 110.9 (2) H8A—C8—H8C 109.5
C17—C18—C19 114.9 (2) H8B—C8—H8C 109.5
N1—C18—H18A 106.7 C18—C17—H17A 109.5
C17—C18—H18A 106.7 C18—C17—H17B 109.5
C19—C18—H18A 106.7 H17A—C17—H17B 109.5
C13—O6—C16 119.1 (3) C18—C17—H17C 109.5
C7—C6—C5 120.0 (3) H17A—C17—H17C 109.5
C7—C6—H6A 120.0 H17B—C17—H17C 109.5
C5—C6—H6A 120.0 O6—C16—H16A 109.5
C15—C14—C13 119.3 (3) O6—C16—H16B 109.5
C15—C14—H14A 120.4 H16A—C16—H16B 109.5
C13—C14—H14A 120.4 O6—C16—H16C 109.5
C4—C3—C2 121.6 (3) H16A—C16—H16C 109.5
C4—C3—H3A 119.2 H16B—C16—H16C 109.5

Hydrogen-bond geometry (Å, °)

D—H···A D—H H···A D···A D—H···A
N1—H1A···O4i 0.90 1.82 2.696 (3) 162
N1—H1B···O1 0.90 1.92 2.791 (3) 162
N1—H1C···O1ii 0.90 1.89 2.777 (3) 167
N2—H2A···O5iii 0.90 1.82 2.718 (3) 173
N2—H2B···O4iv 0.90 2.03 2.917 (3) 170
N2—H2C···O2ii 0.90 1.81 2.703 (3) 1670

Symmetry codes: (i) x−1, −y+1/2, z−1/2; (ii) −x+1, −y, −z+1; (iii) x−1, y, z; (iv) −x+2, −y, −z+2.

Footnotes

Supplementary data and figures for this paper are available from the IUCr electronic archives (Reference: XU5245).

References

  1. Almarsson, O. & Zaworotko, M. J. (2004). Chem. Commun. 17, 1889–1896. [DOI] [PubMed]
  2. Blagden, N., Berry, D. J., Parkin, A., Javed, H., Ibrahim, A., Gavan, P. T., De Matos, L. L. & Seaton, C. C. (2008). New J. Chem. 32, 1659–1672.
  3. Kapildev, K. A., Nitin, G. T. & Raj, S. (2011). Mol. Pharm. 8, 982–989.
  4. Rigaku (2005). CrystalClear Rigaku Corporation, Tokyo, Japan.
  5. Schultheiss, N. & Newman, A. (2009). Cryst. Growth Des. 9, 2950–2967. [DOI] [PMC free article] [PubMed]
  6. Sheldrick, G. M. (2008). Acta Cryst. A64, 112–122. [DOI] [PubMed]
  7. Vishweshwar, P., McMahon, J. A., Bis, J. A. & Zaworotko, M. J. (2006). J. Pharm. Sci. 95, 499–516. [DOI] [PubMed]

Associated Data

This section collects any data citations, data availability statements, or supplementary materials included in this article.

Supplementary Materials

Crystal structure: contains datablock(s) I, global. DOI: 10.1107/S1600536811023968/xu5245sup1.cif

e-67-o1817-sup1.cif (25.8KB, cif)

Structure factors: contains datablock(s) I. DOI: 10.1107/S1600536811023968/xu5245Isup2.hkl

e-67-o1817-Isup2.hkl (225.9KB, hkl)

Supplementary material file. DOI: 10.1107/S1600536811023968/xu5245Isup3.cml

Additional supplementary materials: crystallographic information; 3D view; checkCIF report


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