Abstract
The complete molecule of the title compound, C27H18F4N2O2, is generated by crystallographic twofold symmetry, with one C atom lying on the rotation axis. The dihedral angle between fluoro-substituted phenyl ring and the adjacent benzene ring is 10.37 (5)°. In the crystal, molecules are connected by N—H⋯O and C—H⋯F hydrogen bonds, resulting in supramolecular chains propagating along the c direction.
Related literature
For applications of benzamide derivatives, see: Ashwood et al. (1990 ▶); Kees et al. (1989 ▶); Ragavan et al. (2010 ▶); Carmellino et al. (1994 ▶); Rauko et al. (2001 ▶). For a related structure, see: Cronin et al. (2000 ▶). For the stability of the temperature controller used in the data collection, see: Cosier & Glazer (1986 ▶).
Experimental
Crystal data
C27H18F4N2O2
M r = 478.43
Monoclinic,
a = 42.0478 (10) Å
b = 5.2980 (1) Å
c = 9.5643 (2) Å
β = 92.522 (2)°
V = 2128.57 (8) Å3
Z = 4
Mo Kα radiation
μ = 0.12 mm−1
T = 100 K
0.48 × 0.38 × 0.05 mm
Data collection
Bruker APEXII DUO CCD diffractometer
Absorption correction: multi-scan (SADABS; Bruker, 2009 ▶) T min = 0.946, T max = 0.994
26445 measured reflections
3871 independent reflections
3172 reflections with I > 2σ(I)
R int = 0.031
Refinement
R[F 2 > 2σ(F 2)] = 0.040
wR(F 2) = 0.114
S = 1.06
3871 reflections
163 parameters
H atoms treated by a mixture of independent and constrained refinement
Δρmax = 0.43 e Å−3
Δρmin = −0.21 e Å−3
Data collection: APEX2 (Bruker, 2009 ▶); cell refinement: SAINT (Bruker, 2009 ▶); data reduction: SAINT; program(s) used to solve structure: SHELXTL (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXTL; molecular graphics: SHELXTL; software used to prepare material for publication: SHELXTL and PLATON (Spek, 2009 ▶).
Supplementary Material
Crystal structure: contains datablock(s) global, I. DOI: 10.1107/S1600536811024524/hb5924sup1.cif
Structure factors: contains datablock(s) I. DOI: 10.1107/S1600536811024524/hb5924Isup2.hkl
Supplementary material file. DOI: 10.1107/S1600536811024524/hb5924Isup3.cml
Additional supplementary materials: crystallographic information; 3D view; checkCIF report
Table 1. Hydrogen-bond geometry (Å, °).
| D—H⋯A | D—H | H⋯A | D⋯A | D—H⋯A |
|---|---|---|---|---|
| N1—H1N1⋯O1i | 0.841 (15) | 2.078 (15) | 2.8811 (11) | 159.4 (14) |
| C9—H9A⋯F1ii | 0.95 | 2.41 | 3.2318 (11) | 145 |
Symmetry codes: (i)
; (ii)
.
Acknowledgments
NM gratefully acknowledges funding from Universiti Sains Malaysia under the University Research Grant (No. 1001/PFARMASI/821142). HKF and MH thank the Malaysian Government and Universiti Sains Malaysia for the Research University Grant No. 1001/PFIZIK/811160. MH also thanks Universiti Sains Malaysia for a post-doctoral research fellowship.
supplementary crystallographic information
Comment
A number of benzamide derivatives were reported to possess anti-hypertensive (Ashwood et al., 1990), anti-diabetic (Kees et al., 1989), anti-bacterial (Ragavan et al., 2010), anti-fungal (Carmellino et al., 1994) and anti-cancer (Rauko et al., 2001) activities. As a part of our study on the synthesis of new fluorine- containing compounds with possible biological activities, we report here the crystal structure of the title compound, (I).
The asymmetric unit of the title compound, (Fig. 1), consists of a half molecule of N,N'-(4,4'-methylenebis(4,1-phenylene))bis (2,6-difluorobenzamide), which has a twofold symmetry and it adopts an E, E conformation. The dihedral angle between fluoro- substituted phenyl (C1–C6) rings and benzene (C8–13) ring is 10.37 (5)°. All bond lengths and angles are comparable to values observed in a closely related benzamide structure (Cronin et al., 2000).
In the crystal structure (Fig. 2), the adjacent molecules are connected via N1—H1N1..O1 and C9—H9A···F1 (Table 1) hydrogen bonds forming one-dimensional supramolecular chains along the c-axis.
Experimental
In a round bottom flask, 25ml of tetrahydrofuran (THF) was mixed with 4,4'-diaminodiphenylmethane (0.01 mol,2 g) with stirring. Drops of 2,6-Difluorobenzylchloride (0.02 mol, 3.4 g ) which was dissolved in THF was then added. The mixture was refluxed for 30 min and the yellow precipitate formed was filtered and washed with alkaline water, then with toluene and further washed with dilute hydrochloric acid. The precipate was dissolved in methanol at room temperature yielding colourless plates of (I).
Refinement
Atom H1N1 was located from a difference Fourier maps and refined freely [N–H = 0.842 (15) Å]. The remaining H atoms were positioned geometrically [C–H = 0.95–0.9601 Å] and were refined using a riding model, with Uiso(H) = 1.2 Ueq(C). The highest residual electron density peak is located at 0.61 Å from C6 and the deepest hole 0.64 Å located at from C1.
Figures
Fig. 1.
The asymmetric unit of the title compound, showing 50% probability displacement ellipsoids.
Fig. 2.

A view of a one-dimensional supramolecular chain along the c-axis
Crystal data
| C27H18F4N2O2 | F(000) = 984 |
| Mr = 478.43 | Dx = 1.493 Mg m−3 |
| Monoclinic, C2/c | Mo Kα radiation, λ = 0.71073 Å |
| Hall symbol: -C 2yc | Cell parameters from 8910 reflections |
| a = 42.0478 (10) Å | θ = 2.9–32.5° |
| b = 5.2980 (1) Å | µ = 0.12 mm−1 |
| c = 9.5643 (2) Å | T = 100 K |
| β = 92.522 (2)° | Plate, colourless |
| V = 2128.57 (8) Å3 | 0.48 × 0.38 × 0.05 mm |
| Z = 4 |
Data collection
| Bruker APEXII DUO CCD diffractometer | 3871 independent reflections |
| Radiation source: fine-focus sealed tube | 3172 reflections with I > 2σ(I) |
| graphite | Rint = 0.031 |
| φ and ω scans | θmax = 32.6°, θmin = 1.9° |
| Absorption correction: multi-scan (SADABS; Bruker, 2009) | h = −63→63 |
| Tmin = 0.946, Tmax = 0.994 | k = −7→7 |
| 26445 measured reflections | l = −14→14 |
Refinement
| Refinement on F2 | Primary atom site location: structure-invariant direct methods |
| Least-squares matrix: full | Secondary atom site location: difference Fourier map |
| R[F2 > 2σ(F2)] = 0.040 | Hydrogen site location: inferred from neighbouring sites |
| wR(F2) = 0.114 | H atoms treated by a mixture of independent and constrained refinement |
| S = 1.06 | w = 1/[σ2(Fo2) + (0.0569P)2 + 1.3081P] where P = (Fo2 + 2Fc2)/3 |
| 3871 reflections | (Δ/σ)max < 0.001 |
| 163 parameters | Δρmax = 0.43 e Å−3 |
| 0 restraints | Δρmin = −0.21 e Å−3 |
Special details
| Experimental. The crystal was placed in the cold stream of an Oxford Cryosystems Cobra open-flow nitrogen cryostat (Cosier & Glazer, 1986) operating at 100.0 (1) K. |
| Geometry. All s.u.'s (except the s.u. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell s.u.'s are taken into account individually in the estimation of s.u.'s in distances, angles and torsion angles; correlations between s.u.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell s.u.'s is used for estimating s.u.'s involving l.s. planes. |
| Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > 2σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger. |
Fractional atomic coordinates and isotropic or equivalent isotropic displacement parameters (Å2)
| x | y | z | Uiso*/Ueq | ||
| F1 | 0.131371 (14) | 0.52803 (12) | 0.04350 (6) | 0.02016 (14) | |
| F2 | 0.201443 (15) | 1.06377 (13) | 0.30050 (7) | 0.02303 (15) | |
| O1 | 0.136883 (18) | 0.97437 (15) | 0.36217 (7) | 0.02009 (16) | |
| N1 | 0.113987 (19) | 1.00956 (16) | 0.14156 (8) | 0.01541 (16) | |
| C1 | 0.16118 (2) | 0.60034 (18) | 0.08307 (9) | 0.01554 (17) | |
| C2 | 0.18629 (3) | 0.4631 (2) | 0.03344 (10) | 0.01989 (19) | |
| H2A | 0.1826 | 0.3219 | −0.0264 | 0.024* | |
| C3 | 0.21695 (2) | 0.5379 (2) | 0.07365 (11) | 0.0223 (2) | |
| H3A | 0.2346 | 0.4482 | 0.0398 | 0.027* | |
| C4 | 0.22225 (2) | 0.7422 (2) | 0.16280 (11) | 0.0207 (2) | |
| H4A | 0.2433 | 0.7941 | 0.1895 | 0.025* | |
| C5 | 0.19617 (2) | 0.86802 (19) | 0.21155 (10) | 0.01656 (18) | |
| C6 | 0.16482 (2) | 0.80494 (17) | 0.17353 (9) | 0.01396 (16) | |
| C7 | 0.13715 (2) | 0.93935 (17) | 0.23513 (9) | 0.01430 (17) | |
| C8 | 0.08569 (2) | 1.13880 (18) | 0.17534 (9) | 0.01475 (17) | |
| C9 | 0.08638 (2) | 1.33660 (19) | 0.27115 (10) | 0.01791 (18) | |
| H9A | 0.1058 | 1.3826 | 0.3189 | 0.021* | |
| C10 | 0.05852 (2) | 1.46660 (19) | 0.29678 (10) | 0.01816 (18) | |
| H10A | 0.0591 | 1.6004 | 0.3630 | 0.022* | |
| C11 | 0.02971 (2) | 1.40427 (18) | 0.22709 (10) | 0.01674 (18) | |
| C12 | 0.02942 (2) | 1.20383 (19) | 0.13243 (11) | 0.01962 (19) | |
| H12A | 0.0100 | 1.1570 | 0.0852 | 0.024* | |
| C13 | 0.05708 (2) | 1.07101 (19) | 0.10588 (10) | 0.01794 (18) | |
| H13A | 0.0565 | 0.9352 | 0.0409 | 0.022* | |
| C14 | 0.0000 | 1.5573 (3) | 0.2500 | 0.0213 (3) | |
| H14A | −0.0040 | 1.6645 | 0.1702 | 0.026* | |
| H1N1 | 0.1173 (3) | 0.984 (3) | 0.0566 (16) | 0.023 (4)* |
Atomic displacement parameters (Å2)
| U11 | U22 | U33 | U12 | U13 | U23 | |
| F1 | 0.0186 (3) | 0.0209 (3) | 0.0208 (3) | −0.0022 (2) | −0.0022 (2) | −0.0022 (2) |
| F2 | 0.0207 (3) | 0.0257 (3) | 0.0225 (3) | −0.0035 (2) | −0.0013 (2) | −0.0072 (2) |
| O1 | 0.0220 (3) | 0.0272 (4) | 0.0112 (3) | 0.0051 (3) | 0.0022 (2) | 0.0005 (3) |
| N1 | 0.0144 (3) | 0.0210 (4) | 0.0110 (3) | 0.0032 (3) | 0.0022 (3) | −0.0003 (3) |
| C1 | 0.0159 (4) | 0.0180 (4) | 0.0127 (4) | 0.0003 (3) | 0.0000 (3) | 0.0020 (3) |
| C2 | 0.0249 (5) | 0.0197 (5) | 0.0151 (4) | 0.0056 (4) | 0.0019 (3) | −0.0017 (3) |
| C3 | 0.0201 (4) | 0.0269 (5) | 0.0202 (4) | 0.0078 (4) | 0.0043 (4) | 0.0006 (4) |
| C4 | 0.0148 (4) | 0.0268 (5) | 0.0205 (4) | 0.0026 (3) | 0.0012 (3) | 0.0017 (4) |
| C5 | 0.0168 (4) | 0.0189 (4) | 0.0139 (4) | −0.0001 (3) | −0.0001 (3) | −0.0001 (3) |
| C6 | 0.0146 (4) | 0.0161 (4) | 0.0112 (3) | 0.0008 (3) | 0.0011 (3) | 0.0009 (3) |
| C7 | 0.0150 (4) | 0.0151 (4) | 0.0130 (4) | 0.0003 (3) | 0.0022 (3) | 0.0010 (3) |
| C8 | 0.0137 (4) | 0.0176 (4) | 0.0132 (4) | 0.0012 (3) | 0.0024 (3) | 0.0011 (3) |
| C9 | 0.0151 (4) | 0.0220 (4) | 0.0166 (4) | 0.0002 (3) | 0.0003 (3) | −0.0031 (3) |
| C10 | 0.0166 (4) | 0.0194 (4) | 0.0186 (4) | 0.0005 (3) | 0.0023 (3) | −0.0036 (3) |
| C11 | 0.0139 (4) | 0.0158 (4) | 0.0208 (4) | 0.0000 (3) | 0.0042 (3) | 0.0014 (3) |
| C12 | 0.0145 (4) | 0.0198 (4) | 0.0244 (5) | −0.0008 (3) | −0.0001 (3) | −0.0023 (4) |
| C13 | 0.0166 (4) | 0.0185 (4) | 0.0187 (4) | 0.0000 (3) | 0.0004 (3) | −0.0032 (3) |
| C14 | 0.0140 (6) | 0.0159 (6) | 0.0343 (8) | 0.000 | 0.0044 (5) | 0.000 |
Geometric parameters (Å, °)
| F1—C1 | 1.3489 (11) | C6—C7 | 1.5058 (13) |
| F2—C5 | 1.3534 (11) | C8—C9 | 1.3916 (13) |
| O1—C7 | 1.2297 (11) | C8—C13 | 1.3954 (13) |
| N1—C7 | 1.3459 (12) | C9—C10 | 1.3901 (13) |
| N1—C8 | 1.4222 (12) | C9—H9A | 0.9500 |
| N1—H1N1 | 0.842 (15) | C10—C11 | 1.3963 (13) |
| C1—C2 | 1.3828 (13) | C10—H10A | 0.9500 |
| C1—C6 | 1.3911 (13) | C11—C12 | 1.3952 (14) |
| C2—C3 | 1.3870 (15) | C11—C14 | 1.5131 (12) |
| C2—H2A | 0.9500 | C12—C13 | 1.3922 (13) |
| C3—C4 | 1.3899 (15) | C12—H12A | 0.9500 |
| C3—H3A | 0.9500 | C13—H13A | 0.9500 |
| C4—C5 | 1.3815 (13) | C14—C11i | 1.5131 (12) |
| C4—H4A | 0.9500 | C14—H14A | 0.9601 |
| C5—C6 | 1.3929 (12) | ||
| C7—N1—C8 | 124.77 (8) | N1—C7—C6 | 114.80 (8) |
| C7—N1—H1N1 | 116.8 (10) | C9—C8—C13 | 119.99 (9) |
| C8—N1—H1N1 | 118.2 (10) | C9—C8—N1 | 121.25 (8) |
| F1—C1—C2 | 117.93 (9) | C13—C8—N1 | 118.70 (8) |
| F1—C1—C6 | 118.10 (8) | C10—C9—C8 | 119.73 (9) |
| C2—C1—C6 | 123.96 (9) | C10—C9—H9A | 120.1 |
| C1—C2—C3 | 117.96 (9) | C8—C9—H9A | 120.1 |
| C1—C2—H2A | 121.0 | C9—C10—C11 | 121.26 (9) |
| C3—C2—H2A | 121.0 | C9—C10—H10A | 119.4 |
| C2—C3—C4 | 120.98 (9) | C11—C10—H10A | 119.4 |
| C2—C3—H3A | 119.5 | C12—C11—C10 | 118.18 (9) |
| C4—C3—H3A | 119.5 | C12—C11—C14 | 121.20 (8) |
| C5—C4—C3 | 118.33 (9) | C10—C11—C14 | 120.57 (8) |
| C5—C4—H4A | 120.8 | C13—C12—C11 | 121.31 (9) |
| C3—C4—H4A | 120.8 | C13—C12—H12A | 119.3 |
| F2—C5—C4 | 118.12 (8) | C11—C12—H12A | 119.3 |
| F2—C5—C6 | 118.35 (8) | C12—C13—C8 | 119.51 (9) |
| C4—C5—C6 | 123.53 (9) | C12—C13—H13A | 120.2 |
| C1—C6—C5 | 115.22 (8) | C8—C13—H13A | 120.2 |
| C1—C6—C7 | 123.11 (8) | C11—C14—C11i | 115.22 (11) |
| C5—C6—C7 | 121.53 (8) | C11—C14—H14A | 108.5 |
| O1—C7—N1 | 125.27 (9) | C11i—C14—H14A | 108.4 |
| O1—C7—C6 | 119.92 (8) | ||
| F1—C1—C2—C3 | 179.76 (9) | C5—C6—C7—O1 | −46.84 (13) |
| C6—C1—C2—C3 | −1.62 (15) | C1—C6—C7—N1 | −50.49 (12) |
| C1—C2—C3—C4 | 0.95 (16) | C5—C6—C7—N1 | 133.95 (9) |
| C2—C3—C4—C5 | 0.57 (16) | C7—N1—C8—C9 | 42.34 (14) |
| C3—C4—C5—F2 | 178.73 (9) | C7—N1—C8—C13 | −140.39 (10) |
| C3—C4—C5—C6 | −1.60 (15) | C13—C8—C9—C10 | −0.27 (15) |
| F1—C1—C6—C5 | 179.29 (8) | N1—C8—C9—C10 | 176.96 (9) |
| C2—C1—C6—C5 | 0.68 (14) | C8—C9—C10—C11 | −0.61 (15) |
| F1—C1—C6—C7 | 3.47 (13) | C9—C10—C11—C12 | 1.22 (15) |
| C2—C1—C6—C7 | −175.14 (9) | C9—C10—C11—C14 | −176.46 (9) |
| F2—C5—C6—C1 | −179.35 (8) | C10—C11—C12—C13 | −0.98 (15) |
| C4—C5—C6—C1 | 0.98 (14) | C14—C11—C12—C13 | 176.68 (9) |
| F2—C5—C6—C7 | −3.46 (13) | C11—C12—C13—C8 | 0.14 (15) |
| C4—C5—C6—C7 | 176.87 (9) | C9—C8—C13—C12 | 0.50 (15) |
| C8—N1—C7—O1 | 0.91 (16) | N1—C8—C13—C12 | −176.80 (9) |
| C8—N1—C7—C6 | −179.94 (8) | C12—C11—C14—C11i | 47.96 (8) |
| C1—C6—C7—O1 | 128.72 (10) | C10—C11—C14—C11i | −134.43 (10) |
Symmetry codes: (i) −x, y, −z+1/2.
Hydrogen-bond geometry (Å, °)
| D—H···A | D—H | H···A | D···A | D—H···A |
| N1—H1N1···O1ii | 0.841 (15) | 2.078 (15) | 2.8811 (11) | 159.4 (14) |
| C9—H9A···F1iii | 0.95 | 2.41 | 3.2318 (11) | 145 |
Symmetry codes: (ii) x, −y+2, z−1/2; (iii) x, −y+2, z+1/2.
Footnotes
Supplementary data and figures for this paper are available from the IUCr electronic archives (Reference: HB5924).
References
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Associated Data
This section collects any data citations, data availability statements, or supplementary materials included in this article.
Supplementary Materials
Crystal structure: contains datablock(s) global, I. DOI: 10.1107/S1600536811024524/hb5924sup1.cif
Structure factors: contains datablock(s) I. DOI: 10.1107/S1600536811024524/hb5924Isup2.hkl
Supplementary material file. DOI: 10.1107/S1600536811024524/hb5924Isup3.cml
Additional supplementary materials: crystallographic information; 3D view; checkCIF report

