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Acta Crystallographica Section E: Structure Reports Online logoLink to Acta Crystallographica Section E: Structure Reports Online
. 2011 Jun 30;67(Pt 7):m1003–m1004. doi: 10.1107/S1600536811021921

Poly[[diaqua­manganese(II)]-bis­(μ-4-fluoro­benzoato-κ2 O:O′)]

Hacali Necefoğlu a, Füreya Elif Özbek a, Vijdan Öztürk a, Barış Tercan b, Tuncer Hökelek c,*
PMCID: PMC3151798  PMID: 21836830

Abstract

In the crystal structure of the title complex, [Mn(C7H4FO2)2(H2O)2]n, the MnII atom is located on an inversion centre. It is coordinated by two water mol­ecules in the apical directions and four 4-fluoro­benzoate (PFB) anions, bridging the symmetry related Mn atoms in the basal plane to form an infinite two-dimensional polymeric structure parallel to (100). The four O atoms of the PFB anions around the MnII atom form a slightly distorted square-planar arrangement, while the slightly distorted octa­hedral coordination is completed by the two O atoms of the water mol­ecules. The dihedral angle between the carboxyl­ate group and the adjacent benzene ring is 27.29 (16)°. The O—H⋯O hydrogen bonds further connect the manganese-carboxyl­ate units. π–π contacts between the benzene rings [centroid-centroid distance = 3.6894 (15) Å] further stabilize the crystal structure.

Related literature

For literature on niacin, see: Krishnamachari (1974). For infomation on the nicotinic acid derivative N,N-diethyl­nicotinamide, see: Bigoli et al. (1972). For related structures, see: Hökelek et al. (2008, 2009); Hökelek & Necefoğlu (2007). For bond-length data, see: Allen et al. (1987).graphic file with name e-67-m1003-scheme1.jpg

Experimental

Crystal data

  • [Mn(C7H4FO2)2(H2O)2]

  • M r = 369.18

  • Monoclinic, Inline graphic

  • a = 14.5065 (6) Å

  • b = 6.6107 (3) Å

  • c = 7.3708 (3) Å

  • β = 98.179 (2)°

  • V = 699.66 (5) Å3

  • Z = 2

  • Mo Kα radiation

  • μ = 1.00 mm−1

  • T = 100 K

  • 0.34 × 0.27 × 0.24 mm

Data collection

  • Bruker Kappa APEXII CCD area-detector diffractometer

  • Absorption correction: multi-scan (SADABS; Bruker, 2005) T min = 0.728, T max = 0.786

  • 11656 measured reflections

  • 1758 independent reflections

  • 1720 reflections with I > 2σ(I)

  • R int = 0.029

Refinement

  • R[F 2 > 2σ(F 2)] = 0.039

  • wR(F 2) = 0.111

  • S = 1.28

  • 1758 reflections

  • 114 parameters

  • H atoms treated by a mixture of independent and constrained refinement

  • Δρmax = 1.24 e Å−3

  • Δρmin = −0.45 e Å−3

Data collection: APEX2 (Bruker, 2007); cell refinement: SAINT (Bruker, 2007); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: ORTEP-3 for Windows (Farrugia, 1997); software used to prepare material for publication: WinGX publication routines (Farrugia, 1999) and PLATON (Spek, 2009).

Supplementary Material

Crystal structure: contains datablock(s) I, global. DOI: 10.1107/S1600536811021921/su2282sup1.cif

e-67-m1003-sup1.cif (15KB, cif)

Structure factors: contains datablock(s) I. DOI: 10.1107/S1600536811021921/su2282Isup2.hkl

e-67-m1003-Isup2.hkl (84.8KB, hkl)

Additional supplementary materials: crystallographic information; 3D view; checkCIF report

Table 1. Hydrogen-bond geometry (Å, °).

D—H⋯A D—H H⋯A DA D—H⋯A
O3—H32⋯O2i 0.79 (4) 2.51 (4) 3.039 (3) 125 (4)
O3—H32⋯O1i 0.79 (4) 2.18 (4) 2.935 (3) 158 (4)

Symmetry code: (i) Inline graphic.

Acknowledgments

The authors are indebted to Anadolu University and the Medicinal Plants and Medicine Research Centre of Anadolu University, Eskişehir, Turkey, for the use of the X-ray diffractometer. This work was supported financially by the Scientific and Technological Research Council of Turkey (grant No. 108 T657).

supplementary crystallographic information

Comment

As a part of our ongoing investigations of transition metal complexes of nicotinamide (NA), one form of niacin (Krishnamachari, 1974), and/or the nicotinic acid derivative N,N-diethylnicotinamide (DENA), an important respiratory stimulant (Bigoli et al., 1972), the title compound was synthesized and its crystal structure is reported herein.

In the title two-dimensional polymeric structure the MnII atom is located on a centre of invesion, and surrounded by four 4-fluorobenzoate (PFB) anions and two water molecules (Fig. 1). The PFB anions bridge the symmetry related Mn atoms. The four O atoms [O1, O2, O1'' and O2'', symmetry code: ('') -x, -y, -z] in the equatorial plane around the Mn atom form a slightly distorted square-planar arrangement, while the slightly distorted octahedral coordination is completed by the symmetry related O atoms of the coordinated water molecules (O3 and O3'') in the axial positions (Fig. 1).

The near equalities of the C1—O1 [1.257 (3) Å] and C1—O2 [1.268 (3) Å] bonds in the carboxylate group indicate a delocalized bonding arrangement, rather than localized single and double bonds, and may be compared with the corresponding distances: 1.263 (2), 1.279 (2), 1.263 (2) and 1.278 (2) Å in {[Mn(C11H14NO2)2(H2O)3].2(H2O)}n, (II) (Hökelek et al., 2009), 1.256 (6) and 1.245 (6) Å in [Mn(DENA)2(C7H4ClO2)2(H2O)2], (III) (Hökelek et al., 2008) and 1.265 (6) and 1.275 (6) Å in [Mn(C9H10NO2)2(H2O)4].2(H2O), (IV) (Hökelek & Necefoğlu, 2007).

The Mn—O bond lengths are in the range of 2.1489 (17) - 2.1988 (19) Å, and are close to standard values (Allen et al., 1987) with an average Mn-O bond length of 2.1735 (18) Å. The Mn atom is displaced out of the least-square plane of the carboxylate group (O1/C1/O2) by -1.5976 (1) Å. The dihedral angle between the planar carboxylate group and the adjacent benzene ring A (C2—C7) is 27.29 (16)°.

In the crystal structure, (Fig. 2), intermolecular O—H···O hydrogen bonds (Table 1) link the manganese-carboxylate units, and may be effective in the stabilization of the structure. The π···π contacts between the benzene rings, Cg1—Cg1i [symmetry code: (i) x, 1/2 - y, z - 1/2, where Cg1 is the centroid of the ring A (C2—C7)] may further stabilize the structure, with a centroid-centroid distance of 3.6894 (15) Å.

Experimental

The title compound was prepared by the reaction of MnSO4.H2O (0.85 g, 5 mmol) in H2O (100 ml) and isonicotinamide (1.22 g, 10 mmol) in H2O (50 ml) with sodium 4-fluorobenzoate (1.62 g, 10 mmol) in H2O (50 ml) at room temperature. The mixture was filtered and set aside to crystallize at ambient temperature for two weeks, giving blue single crystals.

Refinement

Atoms H31 and H32 (for H2O) were located in a difference Fourier map and were freely refined. The C-bound H-atoms were positioned geometrically with C—H = 0.95 Å for aromatic H-atoms, and constrained to ride on their parent atoms, with Uiso(H) = 1.2Ueq(C).

Figures

Fig. 1.

Fig. 1.

The molecular structure of the title molecule with the atom-numbering scheme. Displacement ellipsoids are drawn at the 50% probability level [symmetry codes: (') -x, y + 1/2, 1/2 - z, ('') -x, -y, -z, (''') x, 1/2 - y, 1/2 + z]. Hydrogen atoms, except those of the water molecules, have been omitted for clarity.

Fig. 2.

Fig. 2.

A view along the a-axis of the crystal packing of the title compound [c-axis horizontal; b-axis vertical]. Hydrogen atoms, except those of the water molecules (violet balls), have been omitted for clarity.

Crystal data

[Mn(C7H4FO2)2(H2O)2] F(000) = 374
Mr = 369.18 Dx = 1.752 Mg m3
Monoclinic, P21/c Mo Kα radiation, λ = 0.71073 Å
Hall symbol: -P 2ybc Cell parameters from 9752 reflections
a = 14.5065 (6) Å θ = 2.8–28.5°
b = 6.6107 (3) Å µ = 1.00 mm1
c = 7.3708 (3) Å T = 100 K
β = 98.179 (2)° Block, blue
V = 699.66 (5) Å3 0.34 × 0.27 × 0.24 mm
Z = 2

Data collection

Bruker Kappa APEXII CCD area-detector diffractometer 1758 independent reflections
Radiation source: fine-focus sealed tube 1720 reflections with I > 2σ(I)
graphite Rint = 0.029
φ and ω scans θmax = 28.5°, θmin = 2.8°
Absorption correction: multi-scan (SADABS; Bruker, 2005) h = −19→19
Tmin = 0.728, Tmax = 0.786 k = −8→7
11656 measured reflections l = −9→9

Refinement

Refinement on F2 Primary atom site location: structure-invariant direct methods
Least-squares matrix: full Secondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.039 Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.111 H atoms treated by a mixture of independent and constrained refinement
S = 1.28 w = 1/[σ2(Fo2) + (0.031P)2 + 1.8232P] where P = (Fo2 + 2Fc2)/3
1758 reflections (Δ/σ)max < 0.001
114 parameters Δρmax = 1.24 e Å3
0 restraints Δρmin = −0.45 e Å3

Special details

Geometry. All esds (except the esd in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell esds are taken into account individually in the estimation of esds in distances, angles and torsion angles; correlations between esds in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell esds is used for estimating esds involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > 2sigma(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.

Fractional atomic coordinates and isotropic or equivalent isotropic displacement parameters (Å2)

x y z Uiso*/Ueq
Mn1 0.5000 1.0000 0.5000 0.00934 (15)
O1 0.39762 (12) 1.0833 (3) 0.2723 (2) 0.0133 (4)
O2 0.58287 (12) 0.9092 (3) 0.2904 (2) 0.0133 (4)
O3 0.57162 (13) 1.2939 (3) 0.5150 (3) 0.0146 (4)
H31 0.575 (3) 1.370 (6) 0.604 (6) 0.027 (10)*
H32 0.566 (3) 1.361 (6) 0.425 (6) 0.031 (10)*
F1 0.99509 (11) 0.7768 (3) 0.6699 (2) 0.0279 (4)
C1 0.63126 (16) 0.7488 (4) 0.2983 (3) 0.0099 (4)
C2 0.72835 (17) 0.7562 (4) 0.3993 (3) 0.0123 (5)
C3 0.76860 (18) 0.9415 (4) 0.4534 (4) 0.0169 (5)
H3 0.7340 1.0629 0.4285 0.020*
C4 0.85953 (19) 0.9492 (4) 0.5439 (4) 0.0207 (5)
H4 0.8885 1.0748 0.5792 0.025*
C5 0.90623 (17) 0.7696 (5) 0.5807 (4) 0.0184 (5)
C6 0.86858 (19) 0.5840 (4) 0.5321 (4) 0.0200 (5)
H6 0.9030 0.4633 0.5614 0.024*
C7 0.77816 (18) 0.5780 (4) 0.4383 (4) 0.0168 (5)
H7 0.7505 0.4517 0.4008 0.020*

Atomic displacement parameters (Å2)

U11 U22 U33 U12 U13 U23
Mn1 0.0082 (2) 0.0104 (3) 0.0089 (2) 0.00104 (17) −0.00066 (17) −0.00106 (17)
O1 0.0120 (8) 0.0117 (8) 0.0150 (8) 0.0013 (6) −0.0025 (6) 0.0011 (6)
O2 0.0145 (8) 0.0125 (8) 0.0131 (8) 0.0030 (7) 0.0025 (6) 0.0003 (6)
O3 0.0200 (9) 0.0128 (8) 0.0106 (8) −0.0009 (7) 0.0010 (7) 0.0003 (7)
F1 0.0112 (7) 0.0423 (11) 0.0272 (9) −0.0031 (7) −0.0071 (6) −0.0018 (8)
C1 0.0092 (10) 0.0115 (10) 0.0091 (10) −0.0004 (8) 0.0024 (8) 0.0008 (8)
C2 0.0117 (10) 0.0154 (11) 0.0097 (10) −0.0011 (8) 0.0010 (8) −0.0007 (8)
C3 0.0163 (12) 0.0152 (12) 0.0185 (12) −0.0015 (9) −0.0002 (9) −0.0012 (9)
C4 0.0176 (12) 0.0210 (13) 0.0226 (13) −0.0073 (10) −0.0003 (10) −0.0053 (10)
C5 0.0083 (10) 0.0314 (15) 0.0147 (11) −0.0023 (10) −0.0014 (9) −0.0008 (10)
C6 0.0153 (12) 0.0219 (13) 0.0216 (13) 0.0046 (10) −0.0016 (10) 0.0013 (10)
C7 0.0154 (11) 0.0153 (12) 0.0184 (12) 0.0002 (9) −0.0016 (9) −0.0010 (9)

Geometric parameters (Å, °)

Mn1—O1 2.1489 (17) C1—C2 1.498 (3)
Mn1—O1i 2.1489 (17) C2—C3 1.391 (3)
Mn1—O2 2.1728 (17) C2—C7 1.390 (3)
Mn1—O2i 2.1728 (17) C3—H3 0.9500
Mn1—O3 2.1988 (19) C4—C3 1.392 (4)
Mn1—O3i 2.1988 (19) C4—H4 0.9500
O1—C1ii 1.257 (3) C5—C4 1.375 (4)
O2—C1 1.268 (3) C6—C5 1.370 (4)
O3—H31 0.82 (4) C6—H6 0.9500
O3—H32 0.79 (4) C7—C6 1.394 (4)
F1—C5 1.362 (3) C7—H7 0.9500
C1—O1iii 1.257 (3)
O1—Mn1—O1i 180.0 O1iii—C1—C2 117.9 (2)
O1—Mn1—O2 84.62 (7) O2—C1—C2 118.1 (2)
O1i—Mn1—O2 95.38 (7) C3—C2—C1 119.9 (2)
O1—Mn1—O2i 95.38 (7) C7—C2—C1 120.0 (2)
O1i—Mn1—O2i 84.62 (7) C7—C2—C3 120.2 (2)
O1—Mn1—O3 94.69 (7) C2—C3—C4 120.0 (2)
O1i—Mn1—O3 85.31 (7) C2—C3—H3 120.0
O1—Mn1—O3i 85.31 (7) C4—C3—H3 120.0
O1i—Mn1—O3i 94.69 (7) C3—C4—H4 121.0
O2—Mn1—O2i 180.0 C5—C4—C3 118.0 (2)
O2—Mn1—O3 88.55 (7) C5—C4—H4 121.0
O2i—Mn1—O3 91.45 (7) F1—C5—C4 118.1 (2)
O2—Mn1—O3i 91.45 (7) F1—C5—C6 118.2 (2)
O2i—Mn1—O3i 88.55 (7) C6—C5—C4 123.7 (2)
O3—Mn1—O3i 180.00 (10) C5—C6—C7 117.9 (2)
C1ii—O1—Mn1 134.33 (16) C5—C6—H6 121.1
C1—O2—Mn1 123.85 (15) C7—C6—H6 121.1
Mn1—O3—H31 124 (3) C2—C7—C6 120.2 (2)
Mn1—O3—H32 118 (3) C2—C7—H7 119.9
H31—O3—H32 108 (4) C6—C7—H7 119.9
O1iii—C1—O2 124.0 (2)
O2—Mn1—O1—C1ii −106.1 (2) O2—C1—C2—C7 169.1 (2)
O2i—Mn1—O1—C1ii 73.9 (2) C1—C2—C3—C4 −178.6 (2)
O3—Mn1—O1—C1ii −18.0 (2) C7—C2—C3—C4 1.1 (4)
O3i—Mn1—O1—C1ii 162.0 (2) C1—C2—C7—C6 179.9 (2)
O1i—Mn1—O2—C1 41.54 (19) C3—C2—C7—C6 0.2 (4)
O3—Mn1—O2—C1 126.69 (19) C5—C4—C3—C2 −1.4 (4)
O3i—Mn1—O2—C1 −53.31 (19) F1—C5—C4—C3 −179.8 (2)
Mn1—O2—C1—O1iii 93.1 (3) C6—C5—C4—C3 0.5 (4)
Mn1—O2—C1—C2 −86.2 (2) C7—C6—C5—F1 −179.0 (2)
O1iii—C1—C2—C3 169.5 (2) C7—C6—C5—C4 0.7 (4)
O1iii—C1—C2—C7 −10.3 (3) C2—C7—C6—C5 −1.1 (4)
O2—C1—C2—C3 −11.2 (3)

Symmetry codes: (i) −x+1, −y+2, −z+1; (ii) −x+1, y+1/2, −z+1/2; (iii) −x+1, y−1/2, −z+1/2.

Hydrogen-bond geometry (Å, °)

D—H···A D—H H···A D···A D—H···A
O3—H32···O2ii 0.79 (4) 2.51 (4) 3.039 (3) 125 (4)
O3—H32···O1ii 0.79 (4) 2.18 (4) 2.935 (3) 158 (4)

Symmetry codes: (ii) −x+1, y+1/2, −z+1/2.

Footnotes

Supplementary data and figures for this paper are available from the IUCr electronic archives (Reference: SU2282).

References

  1. Allen, F. H., Kennard, O., Watson, D. G., Brammer, L., Orpen, A. G. & Taylor, R. (1987). J. Chem. Soc., Perkin Trans. 2, pp. S1–19.
  2. Bigoli, F., Braibanti, A., Pellinghelli, M. A. & Tiripicchio, A. (1972). Acta Cryst. B28, 962–966.
  3. Bruker (2005). SADABS Bruker AXS Inc. Madison, Wisconsin, USA.
  4. Bruker (2007). APEX2 and SAINT Bruker AXS Inc. Madison, Wisconsin, USA.
  5. Farrugia, L. J. (1997). J. Appl. Cryst. 30, 565.
  6. Farrugia, L. J. (1999). J. Appl. Cryst. 32, 837–838.
  7. Hökelek, T., Çaylak, N. & Necefoğlu, H. (2008). Acta Cryst. E64, m505–m506. [DOI] [PMC free article] [PubMed]
  8. Hökelek, T., Dal, H., Tercan, B., Aybirdi, Ö. & Necefoğlu, H. (2009). Acta Cryst. E65, m747–m748. [DOI] [PMC free article] [PubMed]
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  10. Krishnamachari, K. A. V. R. (1974). Am. J. Clin. Nutr. 27, 108–111. [DOI] [PubMed]
  11. Sheldrick, G. M. (2008). Acta Cryst. A64, 112–122. [DOI] [PubMed]
  12. Spek, A. L. (2009). Acta Cryst. D65, 148–155. [DOI] [PMC free article] [PubMed]

Associated Data

This section collects any data citations, data availability statements, or supplementary materials included in this article.

Supplementary Materials

Crystal structure: contains datablock(s) I, global. DOI: 10.1107/S1600536811021921/su2282sup1.cif

e-67-m1003-sup1.cif (15KB, cif)

Structure factors: contains datablock(s) I. DOI: 10.1107/S1600536811021921/su2282Isup2.hkl

e-67-m1003-Isup2.hkl (84.8KB, hkl)

Additional supplementary materials: crystallographic information; 3D view; checkCIF report


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