Abstract
In the title molecule, C13H13NS, the dihedral angle between the benzene ring and the fused pyrrole ring is 0.71 (8)° and the cyclohexene ring is in an envelope form. The (CH2)3 atoms of the cyclohexene ring are disordered over two positions; the site-occupancy factor for the major component refined to 0.862 (4). In the crystal, intermolecular N—H⋯S hydrogen bonds lead to the formation of centrosymmetric aggregates via an R 2 2(10) ring.
Related literature
For the synthesis of fused carbazole nuclei, see: Pelly et al. (2005 ▶). For heterocycle-annulated tetra-, penta- and hexacyclic carbazole derivatives, see: Chattopadhyay et al. (2006 ▶). For the preparation of 1-oxo compounds via their corresponding hydrazones, see: Rajendra Prasad & Vijayalakshmi (1994 ▶). For related structures, see: Archana et al. (2010 ▶); Thomas Gunaseelan et al. (2009 ▶). For hydrogen-bond motifs, see: Bernstein et al. (1995 ▶).
Experimental
Crystal data
C13H13NS
M r = 215.31
Triclinic,
a = 7.0846 (4) Å
b = 9.5287 (7) Å
c = 9.6384 (6) Å
α = 115.009 (7)°
β = 104.901 (6)°
γ = 98.074 (6)°
V = 546.28 (8) Å3
Z = 2
Cu Kα radiation
μ = 2.31 mm−1
T = 295 K
0.46 × 0.28 × 0.21 mm
Data collection
Oxford Diffraction Xcalibur Ruby Gemini diffractometer
Absorption correction: multi-scan (CrysAlis PRO; Oxford Diffraction, 2010 ▶) T min = 0.609, T max = 1.000
3471 measured reflections
2102 independent reflections
1924 reflections with I > 2σ(I)
R int = 0.022
Refinement
R[F 2 > 2σ(F 2)] = 0.045
wR(F 2) = 0.133
S = 1.06
2102 reflections
145 parameters
3 restraints
H atoms treated by a mixture of independent and constrained refinement
Δρmax = 0.33 e Å−3
Δρmin = −0.22 e Å−3
Data collection: CrysAlis PRO (Oxford Diffraction, 2010 ▶); cell refinement: CrysAlis PRO; data reduction: CrysAlis PRO; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: ORTEP-3 (Farrugia, 1997 ▶) and PLATON (Spek, 2009 ▶); software used to prepare material for publication: PLATON.
Supplementary Material
Crystal structure: contains datablock(s) global, I. DOI: 10.1107/S1600536811019246/tk2746sup1.cif
Structure factors: contains datablock(s) I. DOI: 10.1107/S1600536811019246/tk2746Isup2.hkl
Supplementary material file. DOI: 10.1107/S1600536811019246/tk2746Isup3.cml
Additional supplementary materials: crystallographic information; 3D view; checkCIF report
Table 1. Hydrogen-bond geometry (Å, °).
| D—H⋯A | D—H | H⋯A | D⋯A | D—H⋯A |
|---|---|---|---|---|
| N9—H9⋯S1i | 0.86 (2) | 2.77 (3) | 3.4955 (15) | 143 (2) |
Symmetry code: (i)
.
Acknowledgments
RJB acknowledges the NSF MRI program (grant No. CHE-0619278) for funds to purchase an X-ray diffractometer.
supplementary crystallographic information
Comment
The development of methods for the synthesis of fused carbazole nuclei is becoming increasingly important as a result of the number of natural and synthetic carbazoles that display biological activity (Pelly et al., 2005). Heterocycle-annulated tetra-, penta- and hexa-cyclic carbazole derivatives have been developed using successive applications of three atom economic processes, viz., Claisen rearrangement, olefin metathesis and Diels-Alder reactions (Chattopadhyay et al., 2006). The preparation of 1-oxo compounds via their corresponding hydrazones has been reported (Rajendra Prasad & Vijayalakshmi, 1994). Archana et al. (2010) and Thomas Gunaseelan et al. (2009) have reported the crystal structures of substituted carbazole derivatives, in which the carbazole units are not planar.
In the title molecule, Fig. 1, the dihedral angle between the benzene ring and the fused pyrrole ring is 0.71 (8) °. The cyclohexene ring is in envelope form. Three C atoms (C2A, C3A, C4A) of the cyclohexene ring, with their attached H atoms are disordered over two positions; the site-occupancy factors are ca 0.86 and 0.14. Intermolecular N—H···S hydrogen bonds form a R22(10) (Bernstein et al., 1995) ring in the crystal structure (Table 1 & Fig. 2).
Experimental
A mixture of 6-methyl-2,3,4,9-tetrahydro-1H-carbazol-1-one (0.199 g, 0.001 mol) and Lawesson's reagent (0.404 g, 0.001 mol) was refluxed in pyridine on an oil bath pre-heated to 383 K for 6 h. The contents were poured onto cold water and neutralized using 1:1 HCl, filtered and dried. The product was recrystallized from ethanol. The yield was 0.154 g (72%).
Refinement
Atoms C2A, C3A, C4A of the cyclohexene ring, with attached hydrogen atoms are disordered over two positions; the site occupancy factors refined to 0.862 (4) and 0.138 (4). The N9-H atom was located in a difference Fourier map and refined freely. Other H atoms were positioned geometrically and allowed to ride on their parent atoms, with C—H = 0.93–0.97 Å and Uiso(H) = xUeq(parent atom), where x = 1.5 for methyl and 1.2 for all other carbon-bound H atoms. A damping factor (damp 200 15 in the final refinement cycles) was applied to avoid large and erratic displacements of the hydrogen atoms of the less occupied C atoms.
Figures
Fig. 1.
The molecular structure of the title compound, showing the atom-numbering scheme and displacement ellipsoids drawn at the 30% probability level. H atoms are shown as small spheres of arbitrary radius.
Fig. 2.
Unit cell contents for (I), viewed down the a axis, showing the formation of a R22(10) ring.
Crystal data
| C13H13NS | Z = 2 |
| Mr = 215.31 | F(000) = 228 |
| Triclinic, P1 | Dx = 1.309 Mg m−3 |
| Hall symbol: -P 1 | Melting point: 356 K |
| a = 7.0846 (4) Å | Cu Kα radiation, λ = 1.54184 Å |
| b = 9.5287 (7) Å | Cell parameters from 2595 reflections |
| c = 9.6384 (6) Å | θ = 5.3–72.6° |
| α = 115.009 (7)° | µ = 2.31 mm−1 |
| β = 104.901 (6)° | T = 295 K |
| γ = 98.074 (6)° | Chunk, orange |
| V = 546.28 (8) Å3 | 0.46 × 0.28 × 0.21 mm |
Data collection
| Oxford Diffraction Xcalibur Ruby Gemini diffractometer | 2102 independent reflections |
| Radiation source: Enhance (Cu) X-ray Source | 1924 reflections with I > 2σ(I) |
| graphite | Rint = 0.022 |
| Detector resolution: 10.5081 pixels mm-1 | θmax = 72.8°, θmin = 5.3° |
| ω scans | h = −7→8 |
| Absorption correction: multi-scan (CrysAlis PRO; Oxford Diffraction, 2010) | k = −11→11 |
| Tmin = 0.609, Tmax = 1.000 | l = −9→11 |
| 3471 measured reflections |
Refinement
| Refinement on F2 | Primary atom site location: structure-invariant direct methods |
| Least-squares matrix: full | Secondary atom site location: difference Fourier map |
| R[F2 > 2σ(F2)] = 0.045 | Hydrogen site location: inferred from neighbouring sites |
| wR(F2) = 0.133 | H atoms treated by a mixture of independent and constrained refinement |
| S = 1.06 | w = 1/[σ2(Fo2) + (0.0834P)2 + 0.089P] where P = (Fo2 + 2Fc2)/3 |
| 2102 reflections | (Δ/σ)max = 0.001 |
| 145 parameters | Δρmax = 0.33 e Å−3 |
| 3 restraints | Δρmin = −0.22 e Å−3 |
Special details
| Geometry. Bond distances, angles etc. have been calculated using the rounded fractional coordinates. All su's are estimated from the variances of the (full) variance-covariance matrix. The cell e.s.d.'s are taken into account in the estimation of distances, angles and torsion angles |
| Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > 2σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger. |
Fractional atomic coordinates and isotropic or equivalent isotropic displacement parameters (Å2)
| x | y | z | Uiso*/Ueq | Occ. (<1) | |
| S1 | 1.12016 (7) | 0.28362 (5) | 0.07548 (6) | 0.0567 (1) | |
| N9 | 0.79545 (19) | 0.08614 (14) | 0.14611 (15) | 0.0412 (3) | |
| C1 | 0.9615 (3) | 0.34787 (18) | 0.16910 (19) | 0.0438 (4) | |
| C2A | 0.9571 (3) | 0.5227 (2) | 0.2371 (3) | 0.0611 (6) | 0.862 (4) |
| C3A | 0.7579 (4) | 0.5495 (2) | 0.2548 (3) | 0.0590 (7) | 0.862 (4) |
| C4A | 0.6807 (3) | 0.47256 (19) | 0.3468 (2) | 0.0531 (5) | 0.862 (4) |
| C4C | 0.6904 (3) | 0.30147 (17) | 0.27848 (18) | 0.0421 (4) | |
| C4D | 0.5783 (2) | 0.16637 (17) | 0.27860 (17) | 0.0396 (4) | |
| C5 | 0.4231 (3) | 0.14228 (19) | 0.33927 (19) | 0.0443 (4) | |
| C6 | 0.3399 (2) | −0.00860 (19) | 0.31681 (18) | 0.0430 (4) | |
| C7 | 0.4130 (2) | −0.13824 (18) | 0.23121 (19) | 0.0444 (4) | |
| C8 | 0.5640 (2) | −0.12039 (18) | 0.16959 (19) | 0.0426 (4) | |
| C8A | 0.6473 (2) | 0.03337 (17) | 0.19299 (17) | 0.0382 (4) | |
| C9A | 0.8222 (2) | 0.24863 (17) | 0.19625 (18) | 0.0406 (4) | |
| C16 | 0.1720 (3) | −0.0386 (2) | 0.3790 (2) | 0.0530 (5) | |
| C4B | 0.6807 (3) | 0.47256 (19) | 0.3468 (2) | 0.0531 (5) | 0.138 (4) |
| C3B | 0.855 (2) | 0.5809 (14) | 0.3534 (18) | 0.0590 (7) | 0.138 (4) |
| C2B | 0.9571 (3) | 0.5227 (2) | 0.2371 (3) | 0.0611 (6) | 0.138 (4) |
| H3A | 0.65603 | 0.50556 | 0.14672 | 0.0708* | 0.862 (4) |
| H2B | 0.98737 | 0.56293 | 0.16579 | 0.0733* | 0.862 (4) |
| H4B | 0.54131 | 0.47484 | 0.33584 | 0.0637* | 0.862 (4) |
| H3B | 0.77491 | 0.66471 | 0.31193 | 0.0708* | 0.862 (4) |
| H4A | 0.76376 | 0.53281 | 0.46218 | 0.0637* | 0.862 (4) |
| H8 | 0.60931 | −0.20752 | 0.11426 | 0.0512* | |
| H9 | 0.856 (3) | 0.029 (3) | 0.086 (2) | 0.050 (5)* | |
| H16A | 0.14149 | 0.06091 | 0.43500 | 0.0795* | |
| H16B | 0.21516 | −0.08010 | 0.45319 | 0.0795* | |
| H16C | 0.05241 | −0.11568 | 0.28852 | 0.0795* | |
| H5 | 0.37662 | 0.22852 | 0.39473 | 0.0531* | |
| H7 | 0.35612 | −0.24001 | 0.21612 | 0.0532* | |
| H2A | 1.06434 | 0.58601 | 0.34358 | 0.0733* | 0.862 (4) |
| H2C | 1.09697 | 0.59042 | 0.28888 | 0.0733* | 0.138 (4) |
| H2D | 0.89345 | 0.53906 | 0.14537 | 0.0733* | 0.138 (4) |
| H3C | 0.80970 | 0.66932 | 0.34463 | 0.0708* | 0.138 (4) |
| H3D | 0.95675 | 0.62673 | 0.46174 | 0.0708* | 0.138 (4) |
| H4C | 0.55597 | 0.47686 | 0.27954 | 0.0637* | 0.138 (4) |
| H4D | 0.67683 | 0.50937 | 0.45626 | 0.0637* | 0.138 (4) |
Atomic displacement parameters (Å2)
| U11 | U22 | U33 | U12 | U13 | U23 | |
| S1 | 0.0577 (2) | 0.0544 (2) | 0.0691 (3) | 0.0166 (2) | 0.0349 (2) | 0.0319 (2) |
| N9 | 0.0486 (6) | 0.0350 (6) | 0.0475 (6) | 0.0156 (5) | 0.0246 (5) | 0.0209 (5) |
| C1 | 0.0476 (8) | 0.0392 (7) | 0.0458 (7) | 0.0084 (6) | 0.0155 (6) | 0.0232 (6) |
| C2A | 0.0759 (11) | 0.0386 (8) | 0.0776 (11) | 0.0143 (8) | 0.0367 (9) | 0.0307 (7) |
| C3A | 0.0760 (14) | 0.0372 (8) | 0.0728 (13) | 0.0214 (9) | 0.0301 (11) | 0.0304 (9) |
| C4A | 0.0659 (10) | 0.0342 (7) | 0.0616 (9) | 0.0190 (7) | 0.0300 (8) | 0.0194 (6) |
| C4C | 0.0506 (8) | 0.0340 (7) | 0.0432 (7) | 0.0125 (6) | 0.0184 (6) | 0.0187 (5) |
| C4D | 0.0474 (7) | 0.0338 (6) | 0.0402 (6) | 0.0132 (5) | 0.0179 (6) | 0.0180 (5) |
| C5 | 0.0517 (8) | 0.0407 (7) | 0.0453 (7) | 0.0181 (6) | 0.0239 (6) | 0.0194 (6) |
| C6 | 0.0440 (7) | 0.0451 (7) | 0.0416 (7) | 0.0113 (6) | 0.0178 (6) | 0.0211 (6) |
| C7 | 0.0493 (8) | 0.0363 (7) | 0.0497 (7) | 0.0093 (6) | 0.0188 (6) | 0.0226 (6) |
| C8 | 0.0504 (8) | 0.0342 (6) | 0.0468 (7) | 0.0147 (6) | 0.0206 (6) | 0.0197 (5) |
| C8A | 0.0439 (7) | 0.0347 (6) | 0.0389 (6) | 0.0132 (5) | 0.0167 (5) | 0.0183 (5) |
| C9A | 0.0481 (8) | 0.0339 (6) | 0.0426 (7) | 0.0119 (6) | 0.0174 (6) | 0.0200 (5) |
| C16 | 0.0521 (9) | 0.0552 (9) | 0.0545 (8) | 0.0109 (7) | 0.0256 (7) | 0.0262 (7) |
| C4B | 0.0659 (10) | 0.0342 (7) | 0.0616 (9) | 0.0190 (7) | 0.0300 (8) | 0.0194 (6) |
| C3B | 0.0760 (14) | 0.0372 (8) | 0.0728 (13) | 0.0214 (9) | 0.0301 (11) | 0.0304 (9) |
| C2B | 0.0759 (11) | 0.0386 (8) | 0.0776 (11) | 0.0143 (8) | 0.0367 (9) | 0.0307 (7) |
Geometric parameters (Å, °)
| S1—C1 | 1.643 (2) | C7—C8 | 1.374 (2) |
| N9—C8A | 1.359 (2) | C8—C8A | 1.398 (3) |
| N9—C9A | 1.380 (2) | C2A—H2A | 0.9700 |
| N9—H9 | 0.86 (2) | C2A—H2B | 0.9700 |
| C1—C9A | 1.420 (3) | C2B—H2C | 0.9700 |
| C1—C2B | 1.519 (3) | C2B—H2D | 0.9700 |
| C1—C2A | 1.519 (3) | C3A—H3A | 0.9700 |
| C2A—C3A | 1.508 (4) | C3A—H3B | 0.9700 |
| C2B—C3B | 1.446 (15) | C3B—H3C | 0.9700 |
| C3A—C4A | 1.520 (3) | C3B—H3D | 0.9700 |
| C3B—C4B | 1.463 (15) | C4A—H4A | 0.9700 |
| C4A—C4C | 1.498 (3) | C4A—H4B | 0.9700 |
| C4B—C4C | 1.498 (3) | C4B—H4D | 0.9700 |
| C4C—C4D | 1.415 (3) | C4B—H4C | 0.9700 |
| C4C—C9A | 1.389 (3) | C5—H5 | 0.9300 |
| C4D—C5 | 1.406 (3) | C7—H7 | 0.9300 |
| C4D—C8A | 1.422 (2) | C8—H8 | 0.9300 |
| C5—C6 | 1.376 (3) | C16—H16C | 0.9600 |
| C6—C16 | 1.507 (3) | C16—H16A | 0.9600 |
| C6—C7 | 1.419 (2) | C16—H16B | 0.9600 |
| C8A—N9—C9A | 108.73 (13) | H2A—C2A—H2B | 108.00 |
| C8A—N9—H9 | 127.5 (19) | C1—C2B—H2C | 108.00 |
| C9A—N9—H9 | 123.4 (19) | C1—C2B—H2D | 108.00 |
| S1—C1—C2B | 121.48 (16) | C3B—C2B—H2C | 108.00 |
| C2A—C1—C9A | 114.66 (17) | C3B—C2B—H2D | 108.00 |
| C2B—C1—C9A | 114.66 (17) | H2C—C2B—H2D | 107.00 |
| S1—C1—C2A | 121.48 (16) | C2A—C3A—H3B | 109.00 |
| S1—C1—C9A | 123.85 (14) | C4A—C3A—H3A | 109.00 |
| C1—C2A—C3A | 114.80 (19) | C2A—C3A—H3A | 109.00 |
| C1—C2B—C3B | 118.3 (6) | H3A—C3A—H3B | 108.00 |
| C2A—C3A—C4A | 113.5 (2) | C4A—C3A—H3B | 109.00 |
| C2B—C3B—C4B | 121.0 (10) | C2B—C3B—H3D | 107.00 |
| C3A—C4A—C4C | 109.36 (17) | C2B—C3B—H3C | 107.00 |
| C3B—C4B—C4C | 112.2 (6) | C4B—C3B—H3D | 107.00 |
| C4B—C4C—C9A | 122.29 (17) | H3C—C3B—H3D | 107.00 |
| C4B—C4C—C4D | 130.69 (18) | C4B—C3B—H3C | 107.00 |
| C4A—C4C—C4D | 130.69 (18) | C3A—C4A—H4A | 110.00 |
| C4A—C4C—C9A | 122.29 (17) | C3A—C4A—H4B | 110.00 |
| C4D—C4C—C9A | 107.01 (15) | H4A—C4A—H4B | 108.00 |
| C4C—C4D—C5 | 134.04 (17) | C4C—C4A—H4A | 110.00 |
| C4C—C4D—C8A | 106.52 (14) | C4C—C4A—H4B | 110.00 |
| C5—C4D—C8A | 119.43 (16) | C4C—C4B—H4D | 109.00 |
| C4D—C5—C6 | 120.16 (17) | H4C—C4B—H4D | 108.00 |
| C7—C6—C16 | 119.78 (17) | C3B—C4B—H4C | 109.00 |
| C5—C6—C16 | 121.41 (16) | C3B—C4B—H4D | 109.00 |
| C5—C6—C7 | 118.81 (16) | C4C—C4B—H4C | 109.00 |
| C6—C7—C8 | 123.03 (17) | C4D—C5—H5 | 120.00 |
| C7—C8—C8A | 117.67 (15) | C6—C5—H5 | 120.00 |
| N9—C8A—C4D | 108.52 (15) | C6—C7—H7 | 119.00 |
| N9—C8A—C8 | 130.59 (15) | C8—C7—H7 | 118.00 |
| C4D—C8A—C8 | 120.89 (14) | C7—C8—H8 | 121.00 |
| N9—C9A—C4C | 109.22 (15) | C8A—C8—H8 | 121.00 |
| C1—C9A—C4C | 124.73 (17) | C6—C16—H16A | 109.00 |
| N9—C9A—C1 | 126.04 (15) | C6—C16—H16B | 109.00 |
| C1—C2A—H2A | 109.00 | C6—C16—H16C | 109.00 |
| C1—C2A—H2B | 109.00 | H16A—C16—H16B | 109.00 |
| C3A—C2A—H2A | 109.00 | H16A—C16—H16C | 109.00 |
| C3A—C2A—H2B | 109.00 | H16B—C16—H16C | 109.00 |
| C9A—N9—C8A—C4D | −1.01 (16) | C4A—C4C—C9A—N9 | −179.30 (14) |
| C9A—N9—C8A—C8 | 179.17 (15) | C4A—C4C—C9A—C1 | 0.7 (3) |
| C8A—N9—C9A—C1 | −179.28 (15) | C4D—C4C—C9A—N9 | −0.11 (17) |
| C8A—N9—C9A—C4C | 0.70 (17) | C4D—C4C—C9A—C1 | 179.87 (15) |
| S1—C1—C2A—C3A | 155.86 (17) | C4C—C4D—C5—C6 | 178.74 (17) |
| C9A—C1—C2A—C3A | −25.3 (3) | C8A—C4D—C5—C6 | 0.4 (2) |
| S1—C1—C9A—N9 | −1.7 (2) | C4C—C4D—C8A—N9 | 0.93 (17) |
| S1—C1—C9A—C4C | 178.38 (13) | C4C—C4D—C8A—C8 | −179.22 (14) |
| C2A—C1—C9A—N9 | 179.56 (16) | C5—C4D—C8A—N9 | 179.65 (14) |
| C2A—C1—C9A—C4C | −0.4 (2) | C5—C4D—C8A—C8 | −0.5 (2) |
| C1—C2A—C3A—C4A | 51.1 (3) | C4D—C5—C6—C7 | −0.3 (2) |
| C2A—C3A—C4A—C4C | −48.2 (2) | C4D—C5—C6—C16 | −179.42 (15) |
| C3A—C4A—C4C—C4D | −155.34 (19) | C5—C6—C7—C8 | 0.2 (2) |
| C3A—C4A—C4C—C9A | 23.7 (2) | C16—C6—C7—C8 | 179.32 (15) |
| C4A—C4C—C4D—C5 | 0.2 (3) | C6—C7—C8—C8A | −0.2 (2) |
| C4A—C4C—C4D—C8A | 178.61 (16) | C7—C8—C8A—N9 | −179.81 (15) |
| C9A—C4C—C4D—C5 | −178.95 (17) | C7—C8—C8A—C4D | 0.4 (2) |
| C9A—C4C—C4D—C8A | −0.50 (17) |
Hydrogen-bond geometry (Å, °)
| D—H···A | D—H | H···A | D···A | D—H···A |
| N9—H9···S1i | 0.86 (2) | 2.77 (3) | 3.4955 (15) | 143 (2) |
Symmetry codes: (i) −x+2, −y, −z.
Footnotes
Supplementary data and figures for this paper are available from the IUCr electronic archives (Reference: TK2746).
References
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Associated Data
This section collects any data citations, data availability statements, or supplementary materials included in this article.
Supplementary Materials
Crystal structure: contains datablock(s) global, I. DOI: 10.1107/S1600536811019246/tk2746sup1.cif
Structure factors: contains datablock(s) I. DOI: 10.1107/S1600536811019246/tk2746Isup2.hkl
Supplementary material file. DOI: 10.1107/S1600536811019246/tk2746Isup3.cml
Additional supplementary materials: crystallographic information; 3D view; checkCIF report


