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Acta Crystallographica Section E: Structure Reports Online logoLink to Acta Crystallographica Section E: Structure Reports Online
. 2011 Jun 18;67(Pt 7):o1742. doi: 10.1107/S1600536811023191

1,1-Dibenzyl-3-(3-chloro­benzo­yl)thio­urea

Mohd Faizal Md Nasir a, Ibrahim N Hassan a, Bohari Yamin b, W R W Daud c,a, Mohammad B Kassim b,a,*
PMCID: PMC3151829  PMID: 21837130

Abstract

In the title compound, C22H19ClN2OS, the thiono and carbonyl groups are trans positioned with respect to a partially double C—N bond. The amide group is twisted relative to the thio­urea fragment, forming a dihedral angle of 46.75 (11)°. In the crystal, inter­molecular N—H⋯S and C—H⋯O hydrogen bonds link the mol­ecules into a one-dimensional polymeric structure parallel to the c axis.

Related literature

For related structures and background references, see: Al-abbasi & Kassim (2011); Nasir et al. (2011). For metal complexes of benzoyl­thio­ureas, see: Weiqun et al. (2005); Circu et al. (2009). For the synthetic procedure, see: Hassan et al. (2008).graphic file with name e-67-o1742-scheme1.jpg

Experimental

Crystal data

  • C22H19ClN2OS

  • M r = 394.90

  • Triclinic, Inline graphic

  • a = 9.503 (4) Å

  • b = 9.650 (4) Å

  • c = 12.487 (5) Å

  • α = 72.422 (8)°

  • β = 72.869 (9)°

  • γ = 69.463 (8)°

  • V = 999.1 (7) Å3

  • Z = 2

  • Mo Kα radiation

  • μ = 0.31 mm−1

  • T = 298 K

  • 0.28 × 0.17 × 0.13 mm

Data collection

  • Bruker SMART APEX CCD area-detector diffractometer

  • Absorption correction: multi-scan (SADABS; Bruker, 2000) T min = 0.918, T max = 0.961

  • 13666 measured reflections

  • 5000 independent reflections

  • 2879 reflections with I > 2σ(I)

  • R int = 0.036

Refinement

  • R[F 2 > 2σ(F 2)] = 0.054

  • wR(F 2) = 0.147

  • S = 1.03

  • 5000 reflections

  • 244 parameters

  • H-atom parameters constrained

  • Δρmax = 0.34 e Å−3

  • Δρmin = −0.31 e Å−3

Data collection: SMART (Bruker, 2000); cell refinement: SAINT (Bruker, 2000); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: SHELXTL (Sheldrick, 2008); software used to prepare material for publication: SHELXTL, PARST (Nardelli, 1995) and PLATON (Spek, 2009).

Supplementary Material

Crystal structure: contains datablock(s) I, global. DOI: 10.1107/S1600536811023191/gk2383sup1.cif

e-67-o1742-sup1.cif (20.8KB, cif)

Structure factors: contains datablock(s) I. DOI: 10.1107/S1600536811023191/gk2383Isup2.hkl

e-67-o1742-Isup2.hkl (244.9KB, hkl)

Supplementary material file. DOI: 10.1107/S1600536811023191/gk2383Isup3.cml

Additional supplementary materials: crystallographic information; 3D view; checkCIF report

Table 1. Hydrogen-bond geometry (Å, °).

D—H⋯A D—H H⋯A DA D—H⋯A
N1—H1⋯S1i 0.86 2.74 3.410 (2) 136
C15—H15⋯O1ii 0.93 2.50 3.421 (3) 170

Symmetry codes: (i) Inline graphic; (ii) Inline graphic.

Acknowledgments

The authors thank Universiti Kebangsaan Malaysia for grants UKM-GUP-BTT-07–30-190 and UKM-OUP-TK-16–73/2010 and sabbatical leave for MBK. They also thank the Kementerian Pengajian Tinggi, Malaysia, for the research fund No. UKM-ST-06-FRGS0111–2009.

supplementary crystallographic information

Comment

Benzoylthiourea compounds contain strong donor groups (carbonyl and thioamide) which make them very attractive ligands in coordination chemistry. These ligands react with transition metals, mostly in monoanionic and bidentate form by deprotonation of the amide group, forming neutral complexes with S, O-coordination (Weiqun et al., 2005; Circu et al., 2009).

The title compound, I, is a thiourea derivative analogous to our previously reported compounds (Nasir et al., 2011; Al-abbasi & Kassim, 2011). The thiono S and the carbonyl O atoms are trans positioned at a partially double N1-C8 bond with C7N1C8S1 torsion angle of 127.37 (18)°. The dihedral angle between the mean planes of the thiourea (S1/N1/N2/C8) and the amide group (O1/N1/C1/C7) is 46.75 (11)°. The mean planes of the dibenzylamine (C9/C10/C11/C12/C13/C14/C15 and C16/C17/C18/C19/C19/C20/C21) make an angle of 20.54 (13)°.

Intermolecular N—H···S and C—H···O hydrogen bonds link the molecules into a one dimensional polymeric structure parallel to the c-axis.

Experimental

The title compound was prepared according to a previously reported compound (Hassan et al., 2008). A colourless crystal, suitable for X-ray crystallography, was obtained by a slow evaporation from a mixture of acetone/ethanol solution at room temperature (yield 80%).

Refinement

All H atoms were postioned geometrically with C-H bond lengths in the range 0.93 - 0.97 Å and N-H bond of 0.86 Å,.and refined in the riding model approximation with Uiso(H)=1.2Ueq(C,N), except for methyl group where Uiso(H)= 1.5Ueq(C).

Figures

Fig. 1.

Fig. 1.

The molecular structure of the title compound with displacement ellipsoids drawn at the 50% probability level.

Fig. 2.

Fig. 2.

A packing diagram of the title compound down the a-axis showing the intermolecular hydrogen bonds N1—H1···S1 (-x + 2, -y + 1, -z + 1) and C15—H15··· O1 (-x + 2, -y + 1, -z).

Crystal data

C22H19ClN2OS Z = 2
Mr = 394.90 F(000) = 412
Triclinic, P1 Dx = 1.313 Mg m3
Hall symbol: -P 1 Melting point: 409.15 K
a = 9.503 (4) Å Mo Kα radiation, λ = 0.71073 Å
b = 9.650 (4) Å Cell parameters from 1114 reflections
c = 12.487 (5) Å θ = 2.3–28.5°
α = 72.422 (8)° µ = 0.31 mm1
β = 72.869 (9)° T = 298 K
γ = 69.463 (8)° Block, colourless
V = 999.1 (7) Å3 0.28 × 0.17 × 0.13 mm

Data collection

Bruker SMART APEX CCD area-detector diffractometer 5000 independent reflections
Radiation source: fine-focus sealed tube 2879 reflections with I > 2σ(I)
graphite Rint = 0.036
ω scans θmax = 28.5°, θmin = 2.3°
Absorption correction: multi-scan (SADABS; Bruker, 2000) h = −12→12
Tmin = 0.918, Tmax = 0.961 k = −12→12
13666 measured reflections l = −16→16

Refinement

Refinement on F2 Primary atom site location: structure-invariant direct methods
Least-squares matrix: full Secondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.054 Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.147 H-atom parameters constrained
S = 1.03 w = 1/[σ2(Fo2) + (0.0679P)2 + 0.0522P] where P = (Fo2 + 2Fc2)/3
5000 reflections (Δ/σ)max = 0.001
244 parameters Δρmax = 0.34 e Å3
0 restraints Δρmin = −0.31 e Å3

Special details

Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.

Fractional atomic coordinates and isotropic or equivalent isotropic displacement parameters (Å2)

x y z Uiso*/Ueq
S1 0.89445 (7) 0.70137 (6) 0.39746 (5) 0.0651 (2)
Cl1 1.24059 (9) −0.15952 (8) 0.53858 (7) 0.0984 (3)
O1 1.15882 (17) 0.42880 (17) 0.15716 (13) 0.0614 (4)
N1 1.01426 (17) 0.43643 (17) 0.33839 (14) 0.0475 (4)
H1 0.9940 0.3826 0.4067 0.057*
N2 0.86120 (18) 0.62690 (17) 0.21995 (14) 0.0474 (4)
C8 0.9214 (2) 0.5863 (2) 0.31191 (17) 0.0454 (5)
C1 1.2465 (2) 0.2283 (2) 0.30830 (18) 0.0476 (5)
C7 1.1378 (2) 0.3712 (2) 0.25868 (19) 0.0482 (5)
C6 1.1962 (2) 0.1167 (2) 0.39517 (18) 0.0517 (5)
H6 1.0920 0.1315 0.4278 0.062*
C10 0.6590 (2) 0.5487 (2) 0.19232 (18) 0.0502 (5)
C9 0.8302 (2) 0.5205 (2) 0.1730 (2) 0.0541 (5)
H9A 0.8767 0.4170 0.2104 0.065*
H9B 0.8751 0.5338 0.0914 0.065*
C16 0.7941 (2) 0.7885 (2) 0.17143 (19) 0.0542 (5)
H16A 0.8138 0.8494 0.2115 0.065*
H16B 0.6835 0.8095 0.1842 0.065*
C17 0.8578 (3) 0.8343 (2) 0.04457 (19) 0.0569 (6)
C5 1.3029 (3) −0.0172 (2) 0.43277 (19) 0.0607 (6)
C15 0.5883 (3) 0.5901 (3) 0.1013 (2) 0.0658 (6)
H15 0.6472 0.5954 0.0269 0.079*
C4 1.4577 (3) −0.0385 (3) 0.3883 (2) 0.0708 (7)
H4 1.5287 −0.1283 0.4150 0.085*
C2 1.4025 (2) 0.2061 (2) 0.2627 (2) 0.0633 (6)
H2 1.4370 0.2804 0.2039 0.076*
C3 1.5060 (3) 0.0740 (3) 0.3045 (2) 0.0751 (8)
H3 1.6107 0.0609 0.2752 0.090*
C22 1.0129 (3) 0.7936 (3) −0.0005 (2) 0.0719 (7)
H22 1.0805 0.7298 0.0466 0.086*
C11 0.5686 (3) 0.5384 (3) 0.3020 (2) 0.0741 (7)
H11 0.6143 0.5088 0.3649 0.089*
C18 0.7596 (4) 0.9279 (3) −0.0270 (2) 0.0797 (8)
H18 0.6540 0.9551 0.0021 0.096*
C14 0.4304 (3) 0.6240 (3) 0.1196 (3) 0.0860 (8)
H14 0.3838 0.6519 0.0573 0.103*
C21 1.0691 (4) 0.8466 (4) −0.1150 (3) 0.0994 (11)
H21 1.1744 0.8176 −0.1449 0.119*
C19 0.8167 (6) 0.9815 (4) −0.1415 (3) 0.1121 (13)
H19 0.7500 1.0453 −0.1893 0.135*
C20 0.9722 (7) 0.9406 (4) −0.1848 (3) 0.1165 (15)
H20 1.0111 0.9774 −0.2619 0.140*
C12 0.4102 (4) 0.5717 (4) 0.3194 (3) 0.0922 (9)
H12 0.3504 0.5633 0.3936 0.111*
C13 0.3428 (3) 0.6166 (3) 0.2279 (4) 0.0907 (10)
H13 0.2364 0.6424 0.2393 0.109*

Atomic displacement parameters (Å2)

U11 U22 U33 U12 U13 U23
S1 0.0793 (4) 0.0510 (3) 0.0616 (4) 0.0073 (3) −0.0289 (3) −0.0249 (3)
Cl1 0.0963 (6) 0.0616 (4) 0.0962 (5) −0.0036 (4) −0.0078 (4) 0.0053 (4)
O1 0.0552 (9) 0.0614 (9) 0.0517 (9) −0.0035 (7) −0.0041 (7) −0.0128 (7)
N1 0.0469 (9) 0.0392 (8) 0.0447 (9) 0.0005 (7) −0.0070 (8) −0.0106 (7)
N2 0.0481 (9) 0.0393 (9) 0.0529 (10) −0.0012 (7) −0.0168 (8) −0.0152 (8)
C8 0.0391 (10) 0.0428 (11) 0.0480 (11) −0.0037 (8) −0.0078 (9) −0.0122 (9)
C1 0.0418 (11) 0.0433 (11) 0.0541 (12) −0.0008 (9) −0.0097 (9) −0.0197 (9)
C7 0.0428 (11) 0.0468 (11) 0.0532 (13) −0.0074 (9) −0.0068 (9) −0.0181 (10)
C6 0.0427 (11) 0.0502 (12) 0.0567 (13) −0.0010 (9) −0.0083 (10) −0.0210 (10)
C10 0.0497 (12) 0.0441 (11) 0.0553 (12) −0.0084 (9) −0.0111 (10) −0.0149 (9)
C9 0.0539 (12) 0.0463 (11) 0.0630 (13) −0.0027 (10) −0.0180 (11) −0.0217 (10)
C16 0.0556 (13) 0.0414 (11) 0.0614 (13) 0.0017 (9) −0.0216 (11) −0.0149 (10)
C17 0.0731 (15) 0.0413 (11) 0.0611 (14) −0.0108 (11) −0.0246 (12) −0.0147 (10)
C5 0.0633 (15) 0.0476 (12) 0.0619 (14) −0.0004 (10) −0.0125 (11) −0.0180 (11)
C15 0.0576 (14) 0.0784 (17) 0.0654 (15) −0.0165 (12) −0.0158 (12) −0.0224 (13)
C4 0.0574 (15) 0.0530 (14) 0.0874 (18) 0.0118 (12) −0.0208 (14) −0.0226 (13)
C2 0.0465 (12) 0.0501 (13) 0.0797 (16) −0.0031 (10) −0.0024 (11) −0.0187 (12)
C3 0.0410 (13) 0.0644 (16) 0.106 (2) 0.0039 (11) −0.0051 (13) −0.0322 (16)
C22 0.0767 (18) 0.0659 (16) 0.0727 (17) −0.0243 (14) −0.0109 (14) −0.0150 (13)
C11 0.0800 (18) 0.0793 (18) 0.0590 (15) −0.0218 (15) −0.0077 (13) −0.0176 (13)
C18 0.110 (2) 0.0598 (15) 0.0720 (18) −0.0091 (15) −0.0449 (16) −0.0109 (13)
C14 0.0605 (17) 0.101 (2) 0.108 (2) −0.0165 (15) −0.0323 (17) −0.0332 (19)
C21 0.128 (3) 0.087 (2) 0.086 (2) −0.058 (2) 0.019 (2) −0.0300 (19)
C19 0.203 (4) 0.071 (2) 0.069 (2) −0.033 (3) −0.059 (3) −0.0023 (17)
C20 0.221 (5) 0.078 (2) 0.060 (2) −0.074 (3) −0.007 (3) −0.0133 (17)
C12 0.079 (2) 0.097 (2) 0.095 (2) −0.0399 (18) 0.0271 (18) −0.0401 (18)
C13 0.0533 (16) 0.085 (2) 0.144 (3) −0.0193 (14) −0.009 (2) −0.051 (2)

Geometric parameters (Å, °)

S1—C8 1.672 (2) C5—C4 1.375 (3)
Cl1—C5 1.731 (3) C15—C14 1.382 (4)
O1—C7 1.208 (3) C15—H15 0.9300
N1—C7 1.392 (2) C4—C3 1.365 (3)
N1—C8 1.402 (2) C4—H4 0.9300
N1—H1 0.8600 C2—C3 1.373 (3)
N2—C8 1.326 (2) C2—H2 0.9300
N2—C9 1.470 (3) C3—H3 0.9300
N2—C16 1.471 (2) C22—C21 1.375 (4)
C1—C6 1.384 (3) C22—H22 0.9300
C1—C2 1.386 (3) C11—C12 1.388 (4)
C1—C7 1.488 (3) C11—H11 0.9300
C6—C5 1.383 (3) C18—C19 1.377 (4)
C6—H6 0.9300 C18—H18 0.9300
C10—C15 1.374 (3) C14—C13 1.359 (4)
C10—C11 1.382 (3) C14—H14 0.9300
C10—C9 1.508 (3) C21—C20 1.356 (5)
C9—H9A 0.9700 C21—H21 0.9300
C9—H9B 0.9700 C19—C20 1.371 (6)
C16—C17 1.507 (3) C19—H19 0.9300
C16—H16A 0.9700 C20—H20 0.9300
C16—H16B 0.9700 C12—C13 1.357 (5)
C17—C22 1.372 (3) C12—H12 0.9300
C17—C18 1.378 (3) C13—H13 0.9300
C7—N1—C8 122.70 (17) C10—C15—C14 120.6 (2)
C7—N1—H1 118.6 C10—C15—H15 119.7
C8—N1—H1 118.6 C14—C15—H15 119.7
C8—N2—C9 123.98 (17) C3—C4—C5 119.2 (2)
C8—N2—C16 120.06 (17) C3—C4—H4 120.4
C9—N2—C16 115.01 (16) C5—C4—H4 120.4
N2—C8—N1 117.33 (17) C3—C2—C1 119.8 (2)
N2—C8—S1 124.47 (15) C3—C2—H2 120.1
N1—C8—S1 118.19 (14) C1—C2—H2 120.1
C6—C1—C2 119.73 (19) C4—C3—C2 121.1 (2)
C6—C1—C7 122.07 (18) C4—C3—H3 119.5
C2—C1—C7 118.2 (2) C2—C3—H3 119.5
O1—C7—N1 122.69 (19) C17—C22—C21 120.4 (3)
O1—C7—C1 122.22 (18) C17—C22—H22 119.8
N1—C7—C1 115.04 (18) C21—C22—H22 119.8
C5—C6—C1 119.1 (2) C10—C11—C12 120.7 (3)
C5—C6—H6 120.4 C10—C11—H11 119.7
C1—C6—H6 120.4 C12—C11—H11 119.7
C15—C10—C11 118.3 (2) C19—C18—C17 120.4 (3)
C15—C10—C9 121.0 (2) C19—C18—H18 119.8
C11—C10—C9 120.7 (2) C17—C18—H18 119.8
N2—C9—C10 109.86 (16) C13—C14—C15 120.4 (3)
N2—C9—H9A 109.7 C13—C14—H14 119.8
C10—C9—H9A 109.7 C15—C14—H14 119.8
N2—C9—H9B 109.7 C20—C21—C22 120.5 (3)
C10—C9—H9B 109.7 C20—C21—H21 119.7
H9A—C9—H9B 108.2 C22—C21—H21 119.7
N2—C16—C17 112.77 (16) C20—C19—C18 119.9 (3)
N2—C16—H16A 109.0 C20—C19—H19 120.0
C17—C16—H16A 109.0 C18—C19—H19 120.0
N2—C16—H16B 109.0 C21—C20—C19 119.9 (3)
C17—C16—H16B 109.0 C21—C20—H20 120.1
H16A—C16—H16B 107.8 C19—C20—H20 120.1
C22—C17—C18 118.9 (2) C13—C12—C11 119.9 (3)
C22—C17—C16 121.5 (2) C13—C12—H12 120.1
C18—C17—C16 119.5 (2) C11—C12—H12 120.1
C4—C5—C6 121.1 (2) C12—C13—C14 120.2 (3)
C4—C5—Cl1 119.47 (18) C12—C13—H13 119.9
C6—C5—Cl1 119.44 (18) C14—C13—H13 119.9
C9—N2—C8—N1 26.1 (3) C1—C6—C5—Cl1 −178.21 (16)
C16—N2—C8—N1 −165.58 (17) C11—C10—C15—C14 1.5 (4)
C9—N2—C8—S1 −154.11 (16) C9—C10—C15—C14 −176.4 (2)
C16—N2—C8—S1 14.2 (3) C6—C5—C4—C3 −1.0 (4)
C7—N1—C8—N2 52.4 (3) Cl1—C5—C4—C3 179.7 (2)
C7—N1—C8—S1 −127.36 (18) C6—C1—C2—C3 −0.4 (3)
C8—N1—C7—O1 −12.5 (3) C7—C1—C2—C3 −178.5 (2)
C8—N1—C7—C1 164.86 (17) C5—C4—C3—C2 −1.2 (4)
C6—C1—C7—O1 −140.7 (2) C1—C2—C3—C4 1.9 (4)
C2—C1—C7—O1 37.3 (3) C18—C17—C22—C21 0.5 (4)
C6—C1—C7—N1 41.9 (3) C16—C17—C22—C21 −174.9 (2)
C2—C1—C7—N1 −140.1 (2) C15—C10—C11—C12 −1.1 (4)
C2—C1—C6—C5 −1.7 (3) C9—C10—C11—C12 176.8 (2)
C7—C1—C6—C5 176.25 (19) C22—C17—C18—C19 −1.0 (4)
C8—N2—C9—C10 110.5 (2) C16—C17—C18—C19 174.5 (2)
C16—N2—C9—C10 −58.3 (2) C10—C15—C14—C13 0.0 (4)
C15—C10—C9—N2 119.3 (2) C17—C22—C21—C20 0.5 (4)
C11—C10—C9—N2 −58.6 (3) C17—C18—C19—C20 0.5 (5)
C8—N2—C16—C17 127.7 (2) C22—C21—C20—C19 −1.1 (5)
C9—N2—C16—C17 −63.0 (2) C18—C19—C20—C21 0.6 (5)
N2—C16—C17—C22 −47.3 (3) C10—C11—C12—C13 −0.7 (4)
N2—C16—C17—C18 137.3 (2) C11—C12—C13—C14 2.3 (5)
C1—C6—C5—C4 2.5 (3) C15—C14—C13—C12 −1.9 (5)

Hydrogen-bond geometry (Å, °)

D—H···A D—H H···A D···A D—H···A
C16—H16A···S1 0.97 2.51 3.029 (3) 113
N1—H1···S1i 0.86 2.74 3.410 (2) 136
C15—H15···O1ii 0.93 2.50 3.421 (3) 170

Symmetry codes: (i) −x+2, −y+1, −z+1; (ii) −x+2, −y+1, −z.

Footnotes

Supplementary data and figures for this paper are available from the IUCr electronic archives (Reference: GK2383).

References

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Associated Data

This section collects any data citations, data availability statements, or supplementary materials included in this article.

Supplementary Materials

Crystal structure: contains datablock(s) I, global. DOI: 10.1107/S1600536811023191/gk2383sup1.cif

e-67-o1742-sup1.cif (20.8KB, cif)

Structure factors: contains datablock(s) I. DOI: 10.1107/S1600536811023191/gk2383Isup2.hkl

e-67-o1742-Isup2.hkl (244.9KB, hkl)

Supplementary material file. DOI: 10.1107/S1600536811023191/gk2383Isup3.cml

Additional supplementary materials: crystallographic information; 3D view; checkCIF report


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