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Acta Crystallographica Section E: Structure Reports Online logoLink to Acta Crystallographica Section E: Structure Reports Online
. 2011 Jun 18;67(Pt 7):m919. doi: 10.1107/S1600536811022185

Di-μ-benzoato-κ3 O,O′:O′;κ3 O:O,O′-bis­[(benzoato-κ2 O,O′)(1,10-phenanthroline-κ2 N,N′)cadmium]

Hong-Jin Li a, Zhu-Qing Gao a,*, Jin-Zhong Gu b
PMCID: PMC3151832  PMID: 21836904

Abstract

The dinuclear title compound, [Cd2(C7H5O2)4(C12H8N2)2], lies on a crystallographic twofold axis. The CdII ions are connected by two bridging benzoate anions and each ion is seven-coordinated by five O atoms from three benzoate ligands and by two N atoms from 1,10-phenanthroline. The benzoate ligands adopt two different coordination modes, acting as bidentate and bridging tridentate ligands. The discrete neutral mol­ecules further extend their structure into a three-dimensional supra­molecular framework by inter­molecular π–π [inter­planar distances of 3.392 (4) Å] and C—H⋯π stacking inter­actions [H–mean plane = 2.567 (4) and 2.781 (4) Å].

Related literature

For the structures and properties of cadmium compounds, see: Gu et al. (2007, 2011). For bond lengths and angles in related lead(II) compounds, see: Gu et al. (2011); Shi et al. (2008).graphic file with name e-67-0m919-scheme1.jpg

Experimental

Crystal data

  • [Cd2(C7H5O2)4(C12H8N2)2]

  • M r = 1069.65

  • Monoclinic, Inline graphic

  • a = 21.90 (2) Å

  • b = 10.023 (11) Å

  • c = 20.52 (2) Å

  • β = 103.759 (10)°

  • V = 4376 (8) Å3

  • Z = 4

  • Mo Kα radiation

  • μ = 1.04 mm−1

  • T = 296 K

  • 0.28 × 0.26 × 0.24 mm

Data collection

  • Bruker APEXII CCD diffractometer

  • Absorption correction: multi-scan (SADABS; Bruker, 2004) T min = 0.761, T max = 0.789

  • 15316 measured reflections

  • 4068 independent reflections

  • 3002 reflections with I > 2σ(I)

  • R int = 0.037

Refinement

  • R[F 2 > 2σ(F 2)] = 0.040

  • wR(F 2) = 0.093

  • S = 1.12

  • 4068 reflections

  • 286 parameters

  • 24 restraints

  • H-atom parameters constrained

  • Δρmax = 0.80 e Å−3

  • Δρmin = −0.62 e Å−3

Data collection: APEX2 (Bruker, 2004); cell refinement: SAINT (Bruker, 2004); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: DIAMOND (Brandenburg, 2006); software used to prepare material for publication: SHELXTL (Sheldrick, 2008).

Supplementary Material

Crystal structure: contains datablock(s) I, global. DOI: 10.1107/S1600536811022185/zq2105sup1.cif

e-67-0m919-sup1.cif (19.8KB, cif)

Structure factors: contains datablock(s) I. DOI: 10.1107/S1600536811022185/zq2105Isup2.hkl

e-67-0m919-Isup2.hkl (199.5KB, hkl)

Additional supplementary materials: crystallographic information; 3D view; checkCIF report

supplementary crystallographic information

Comment

Transition metal compounds have shown not only versatile architectures but also desirable properties, e.g. luminescent, magnetic, catalytic, and gas absorption and separation properties (Gu et al., 2007; 2011). In order to extend our investigations in this field, we designed and synthesized one dinuclear cadmium(II) compound, [Cd2(C7H5O2)4(C12H8N2)2], and report its structure here.

The asymmetric unit of the title complex (Fig. 1) contains one CdII ion, two benzoate ligands, and one 1,10-phenanthroline molecule. Each CdII is seven-coordinate by five O atoms from three benzoate ligands, and two N atoms from 1,10-phenanthroline, and the coordination geometry around the CdII ion may be described as a distorted mono-capped trigonal prism. Two adjacent CdII units are connected by two bridging benzoate anions to generate a dinuclear complex. The dinuclear molecule lies on a crystallgraphic two-fold axis. The benzoate ligands adopt two different coordination modes acting as bidentate and bridging tridentate ligands.

The Cd—N bond distances of 2.347 (4) and 2.375 (4) Å and the Cd—O bond distances in the range of 2.265 (4)–2.493 (4) Å, are comparable to those reported for other CdII—O and CdII–N donor complexes (Gu et al., 2011; Shi et al., 2008).

In the crystal structure, π–π stacking interactions between adjacent 1,10-phenanthroline ligands are observed with interplanar distances of 3.392 (4) Å. Furthermore, adjacent benzene rings from benzoate ligands are involved in C—H···π stacking interactions (H—mean plane = 2.567 (4) Å). C–H···π stacking interactions between benzene rings from benzoate ligands and 1,10-phenanthroline ligands are also observed (H—mean plane = 2.781 (4) Å) . The discrete neutral molecules further extend their structure into a three-dimensional supramolecular framework by intermolecular π–π stacking interactions (Fig. 2).

Experimental

A mixture of Cd(CH3COO)2.2H2O (0.14 g, 0.54 mmol), benzoic acid (0.12 g,1.0 mmol), 1,10-phenanthroline (0.11 g, 0.54 mmol), NaOH (0.04 g, 1.0 mmol), and water (10 ml) was stirred at room temperature for 15 min, and then sealed in a 25 ml Teflon-lined, stainless-steel Parr bomb. The bomb was heated at 433 K for 3 days. Upon cooling, the solution yielded single crystals of the title complex in ca 75% yield. Anal. Calcd for C52H36N4O8Cd2: C,58.39; H, 3.39; N, 5.24. Found: C, 58.73; H, 3.17; N, 5.63.

Refinement

The H atoms were placed in geometrically idealized positions and constrained to ride on their respective parent atoms with C—H = 0.93 Å and Uiso(H) = 1.2Ueq(C).

Figures

Fig. 1.

Fig. 1.

The molecular structure of the title complex showing the atom-labeling scheme and displacement ellipsoids drawn at the 30% probability level.

Fig. 2.

Fig. 2.

View of the crystal packing along the b axis, showing the three-dimensional framework structure of the title complex.

Crystal data

[Cd2(C7H5O2)4(C12H8N2)2] Z = 4
Mr = 1069.65 F(000) = 2144
Monoclinic, C2/c Dx = 1.624 Mg m3
Hall symbol: -C 2yc Mo Kα radiation, λ = 0.71073 Å
a = 21.90 (2) Å µ = 1.04 mm1
b = 10.023 (11) Å T = 296 K
c = 20.52 (2) Å Block, colourless
β = 103.759 (10)° 0.28 × 0.26 × 0.24 mm
V = 4376 (8) Å3

Data collection

Bruker APEXII CCD diffractometer 4068 independent reflections
Radiation source: fine-focus sealed tube 3002 reflections with I > 2σ(I)
graphite Rint = 0.037
φ and ω scans θmax = 25.5°, θmin = 2.3°
Absorption correction: multi-scan (SADABS; Bruker, 1997) h = −23→26
Tmin = 0.761, Tmax = 0.789 k = −12→12
15316 measured reflections l = −24→24

Refinement

Refinement on F2 Primary atom site location: structure-invariant direct methods
Least-squares matrix: full Secondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.040 Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.093 H-atom parameters constrained
S = 1.12 w = 1/[σ2(Fo2) + (0.0278P)2 + 10.2493P] where P = (Fo2 + 2Fc2)/3
4068 reflections (Δ/σ)max = 0.001
286 parameters Δρmax = 0.80 e Å3
24 restraints Δρmin = −0.62 e Å3

Special details

Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.

Fractional atomic coordinates and isotropic or equivalent isotropic displacement parameters (Å2)

x y z Uiso*/Ueq
C21 0.16729 (15) 0.0146 (4) 0.09716 (19) 0.0619 (13)
C22 0.1880 (2) −0.1080 (4) 0.1257 (2) 0.104 (2)
H22 0.1688 −0.1463 0.1570 0.125*
C23 0.2374 (2) −0.1733 (4) 0.1075 (3) 0.124 (3)
H23 0.2513 −0.2553 0.1266 0.149*
C24 0.26614 (18) −0.1160 (6) 0.0608 (3) 0.119 (3)
H24 0.2992 −0.1597 0.0486 0.143*
C25 0.2454 (2) 0.0065 (6) 0.0322 (2) 0.149 (4)
H25 0.2646 0.0448 0.0009 0.179*
C26 0.1960 (2) 0.0718 (4) 0.0504 (2) 0.116 (3)
H26 0.1821 0.1539 0.0313 0.139*
Cd1 0.025400 (15) 0.20368 (3) 0.167828 (17) 0.05215 (13)
C1 −0.0718 (2) 0.3046 (6) 0.0284 (3) 0.0672 (13)
H1 −0.0786 0.2135 0.0217 0.081*
N2 −0.03302 (17) 0.3434 (4) 0.0840 (2) 0.0544 (9)
C5 −0.0233 (2) 0.4760 (4) 0.0932 (2) 0.0547 (12)
N1 0.04950 (18) 0.4302 (4) 0.1968 (2) 0.0561 (10)
C12 0.0894 (2) 0.4697 (6) 0.2513 (3) 0.0718 (15)
H12 0.1095 0.4058 0.2818 0.086*
C8 0.0312 (3) 0.6576 (5) 0.1634 (3) 0.0673 (15)
C6 −0.0421 (3) 0.7075 (6) 0.0599 (4) 0.0869 (18)
H6 −0.0627 0.7702 0.0290 0.104*
C10 0.0734 (3) 0.6964 (6) 0.2211 (4) 0.0846 (18)
H10 0.0818 0.7865 0.2296 0.102*
C11 0.1029 (3) 0.6042 (7) 0.2656 (3) 0.0856 (18)
H11 0.1316 0.6296 0.3047 0.103*
C4 −0.0541 (2) 0.5701 (5) 0.0467 (3) 0.0670 (14)
C7 −0.0023 (3) 0.7484 (6) 0.1148 (4) 0.090 (2)
H7 0.0041 0.8395 0.1221 0.107*
C9 0.0200 (2) 0.5181 (5) 0.1524 (3) 0.0563 (12)
C3 −0.0941 (3) 0.5224 (6) −0.0112 (3) 0.0782 (16)
H3 −0.1147 0.5820 −0.0438 0.094*
C2 −0.1034 (2) 0.3905 (7) −0.0209 (3) 0.0761 (15)
H2 −0.1303 0.3580 −0.0597 0.091*
O1 −0.06784 (16) 0.1836 (4) 0.21712 (17) 0.0731 (10)
C13 −0.0884 (2) 0.0905 (5) 0.1775 (3) 0.0584 (12)
O2 −0.06000 (17) 0.0531 (3) 0.1358 (2) 0.0846 (11)
O4 0.10958 (18) 0.2070 (4) 0.1074 (2) 0.0885 (12)
C20 0.1165 (2) 0.0874 (5) 0.1184 (3) 0.0603 (12)
O3 0.08360 (17) 0.0266 (4) 0.1500 (2) 0.0852 (11)
C14 −0.1497 (2) 0.0270 (6) 0.1776 (3) 0.0687 (14)
C15 −0.1692 (3) −0.0831 (7) 0.1401 (4) 0.106 (2)
H15 −0.1437 −0.1201 0.1145 0.128*
C19 −0.1870 (3) 0.0794 (9) 0.2161 (3) 0.120 (3)
H19 −0.1735 0.1533 0.2430 0.144*
C17 −0.2647 (5) −0.0860 (17) 0.1749 (7) 0.204 (9)
H17 −0.3045 −0.1215 0.1722 0.244*
C16 −0.2269 (5) −0.1412 (11) 0.1396 (6) 0.171 (5)
H16 −0.2393 −0.2184 0.1148 0.205*
C18 −0.2449 (4) 0.0220 (14) 0.2148 (5) 0.181 (6)
H18 −0.2702 0.0571 0.2411 0.217*

Atomic displacement parameters (Å2)

U11 U22 U33 U12 U13 U23
C21 0.049 (3) 0.066 (3) 0.072 (3) 0.001 (2) 0.016 (2) −0.014 (3)
C22 0.086 (4) 0.078 (4) 0.163 (6) 0.021 (4) 0.060 (4) 0.003 (4)
C23 0.100 (5) 0.093 (5) 0.189 (8) 0.035 (4) 0.054 (5) −0.006 (5)
C24 0.088 (5) 0.143 (7) 0.139 (7) 0.025 (5) 0.051 (5) −0.037 (6)
C25 0.125 (7) 0.214 (10) 0.134 (7) 0.063 (7) 0.083 (5) 0.017 (7)
C26 0.106 (5) 0.157 (7) 0.102 (5) 0.042 (5) 0.060 (4) 0.023 (5)
Cd1 0.0478 (2) 0.04592 (19) 0.0689 (2) 0.00002 (17) 0.02607 (16) −0.00061 (18)
C1 0.056 (3) 0.070 (3) 0.079 (4) −0.006 (3) 0.025 (3) −0.006 (3)
N2 0.049 (2) 0.052 (2) 0.069 (3) −0.0022 (18) 0.027 (2) −0.0026 (19)
C5 0.048 (3) 0.053 (3) 0.074 (3) 0.003 (2) 0.037 (3) 0.003 (3)
N1 0.050 (2) 0.057 (2) 0.068 (2) −0.020 (2) 0.027 (2) −0.019 (2)
C12 0.063 (3) 0.080 (4) 0.081 (4) −0.018 (3) 0.034 (3) −0.014 (3)
C8 0.072 (3) 0.044 (3) 0.103 (4) −0.006 (3) 0.055 (3) −0.009 (3)
C6 0.085 (4) 0.059 (4) 0.133 (6) 0.014 (3) 0.059 (4) 0.020 (4)
C10 0.095 (5) 0.062 (4) 0.114 (5) −0.018 (4) 0.058 (4) −0.027 (4)
C11 0.073 (4) 0.098 (5) 0.095 (4) −0.035 (4) 0.039 (3) −0.039 (4)
C4 0.059 (3) 0.063 (3) 0.094 (4) 0.007 (3) 0.047 (3) 0.011 (3)
C7 0.103 (5) 0.048 (3) 0.137 (6) 0.003 (3) 0.068 (5) −0.003 (4)
C9 0.056 (3) 0.046 (3) 0.081 (4) 0.000 (2) 0.045 (3) −0.004 (2)
C3 0.061 (4) 0.088 (4) 0.096 (4) 0.019 (3) 0.039 (3) 0.027 (4)
C2 0.057 (3) 0.101 (5) 0.070 (4) 0.001 (3) 0.015 (3) 0.007 (3)
O1 0.072 (2) 0.075 (2) 0.071 (2) −0.0174 (19) 0.0138 (18) −0.0037 (19)
C13 0.050 (3) 0.051 (3) 0.074 (3) 0.000 (2) 0.016 (3) 0.009 (3)
O2 0.072 (2) 0.061 (2) 0.133 (3) −0.0092 (19) 0.049 (2) −0.016 (2)
O4 0.088 (3) 0.075 (3) 0.117 (3) 0.027 (2) 0.054 (2) 0.019 (2)
C20 0.051 (3) 0.061 (3) 0.071 (3) 0.004 (3) 0.019 (2) −0.011 (3)
O3 0.069 (2) 0.067 (2) 0.135 (3) −0.0008 (19) 0.056 (2) −0.009 (2)
C14 0.047 (3) 0.081 (4) 0.075 (3) −0.011 (3) 0.010 (3) 0.018 (3)
C15 0.085 (5) 0.091 (5) 0.130 (6) −0.035 (4) −0.001 (4) 0.006 (4)
C19 0.060 (4) 0.207 (9) 0.099 (5) −0.015 (5) 0.029 (4) 0.008 (5)
C17 0.084 (7) 0.311 (19) 0.182 (12) −0.098 (10) −0.036 (7) 0.124 (12)
C16 0.110 (8) 0.148 (8) 0.217 (13) −0.077 (7) −0.035 (7) 0.061 (8)
C18 0.060 (5) 0.363 (18) 0.126 (8) −0.014 (7) 0.037 (5) 0.060 (9)

Geometric parameters (Å, °)

C21—C22 1.3900 C8—C7 1.418 (8)
C21—C26 1.3900 C8—C9 1.429 (7)
C21—C20 1.481 (5) C6—C7 1.317 (9)
C22—C23 1.3900 C6—C4 1.416 (8)
C22—H22 0.9300 C6—H6 0.9300
C23—C24 1.3900 C10—C11 1.350 (8)
C23—H23 0.9300 C10—H10 0.9300
C24—C25 1.3900 C11—H11 0.9300
C24—H24 0.9300 C4—C3 1.384 (8)
C25—C26 1.3900 C7—H7 0.9300
C25—H25 0.9300 C3—C2 1.344 (8)
C26—H26 0.9300 C3—H3 0.9300
Cd1—O3 2.265 (4) C2—H2 0.9300
Cd1—O1i 2.331 (4) O1—C13 1.249 (6)
Cd1—N2 2.347 (4) O1—Cd1i 2.331 (4)
Cd1—O2 2.371 (4) C13—O2 1.230 (6)
Cd1—N1 2.375 (4) C13—C14 1.486 (6)
Cd1—O4 2.454 (4) O4—C20 1.223 (6)
Cd1—O1 2.493 (4) C20—O3 1.237 (6)
C1—N2 1.309 (6) C14—C15 1.355 (8)
C1—C2 1.383 (7) C14—C19 1.368 (8)
C1—H1 0.9300 C15—C16 1.388 (10)
N2—C5 1.352 (6) C15—H15 0.9300
C5—C4 1.396 (7) C19—C18 1.387 (10)
C5—C9 1.416 (7) C19—H19 0.9300
N1—C12 1.306 (6) C17—C16 1.344 (18)
N1—C9 1.320 (6) C17—C18 1.364 (18)
C12—C11 1.396 (8) C17—H17 0.9300
C12—H12 0.9300 C16—H16 0.9300
C8—C10 1.374 (8) C18—H18 0.9300
C22—C21—C26 120.0 C10—C8—C9 117.9 (6)
C22—C21—C20 120.3 (3) C7—C8—C9 118.5 (6)
C26—C21—C20 119.6 (3) C7—C6—C4 121.5 (6)
C22—C21—Cd1 116.71 (19) C7—C6—H6 119.3
C26—C21—Cd1 123.19 (19) C4—C6—H6 119.3
C21—C22—C23 120.0 C11—C10—C8 120.3 (6)
C21—C22—H22 120.0 C11—C10—H10 119.8
C23—C22—H22 120.0 C8—C10—H10 119.8
C24—C23—C22 120.0 C10—C11—C12 118.4 (6)
C24—C23—H23 120.0 C10—C11—H11 120.8
C22—C23—H23 120.0 C12—C11—H11 120.8
C25—C24—C23 120.0 C3—C4—C5 117.2 (5)
C25—C24—H24 120.0 C3—C4—C6 123.5 (6)
C23—C24—H24 120.0 C5—C4—C6 119.3 (6)
C24—C25—C26 120.0 C6—C7—C8 121.9 (6)
C24—C25—H25 120.0 C6—C7—H7 119.1
C26—C25—H25 120.0 C8—C7—H7 119.1
C25—C26—C21 120.0 N1—C9—C5 120.8 (4)
C25—C26—H26 120.0 N1—C9—C8 120.4 (5)
C21—C26—H26 120.0 C5—C9—C8 118.8 (5)
O3—Cd1—O1i 89.55 (14) C2—C3—C4 120.6 (5)
O3—Cd1—N2 125.34 (15) C2—C3—H3 119.7
O1i—Cd1—N2 144.12 (13) C4—C3—H3 119.7
O3—Cd1—O2 83.90 (15) C3—C2—C1 118.2 (6)
O1i—Cd1—O2 108.88 (14) C3—C2—H2 120.9
N2—Cd1—O2 85.43 (15) C1—C2—H2 120.9
O3—Cd1—N1 133.60 (14) C13—O1—Cd1i 136.0 (3)
O1i—Cd1—N1 79.49 (14) C13—O1—Cd1 90.0 (3)
N2—Cd1—N1 70.31 (15) Cd1i—O1—Cd1 103.66 (14)
O2—Cd1—N1 142.34 (13) O2—C13—O1 121.0 (5)
O3—Cd1—O4 53.83 (13) O2—C13—C14 118.5 (5)
O1i—Cd1—O4 110.26 (15) O1—C13—C14 120.4 (5)
N2—Cd1—O4 88.04 (14) C13—O2—Cd1 96.3 (3)
O2—Cd1—O4 120.44 (15) C20—O4—Cd1 88.2 (3)
N1—Cd1—O4 87.97 (13) O4—C20—O3 121.2 (5)
O3—Cd1—O1 123.30 (13) O4—C20—C21 119.9 (5)
O1i—Cd1—O1 75.51 (14) O3—C20—C21 118.9 (5)
N2—Cd1—O1 89.38 (13) C20—O3—Cd1 96.8 (3)
O2—Cd1—O1 52.60 (13) C15—C14—C19 119.4 (6)
N1—Cd1—O1 97.48 (12) C15—C14—C13 120.7 (6)
O4—Cd1—O1 172.80 (13) C19—C14—C13 120.0 (6)
N2—C1—C2 124.1 (5) C14—C15—C16 120.6 (9)
N2—C1—H1 117.9 C14—C15—H15 119.7
C2—C1—H1 117.9 C16—C15—H15 119.7
C1—N2—C5 117.5 (5) C14—C19—C18 119.9 (9)
C1—N2—Cd1 126.1 (3) C14—C19—H19 120.1
C5—N2—Cd1 116.4 (3) C18—C19—H19 120.1
N2—C5—C4 122.3 (5) C16—C17—C18 120.1 (10)
N2—C5—C9 117.6 (4) C16—C17—H17 120.0
C4—C5—C9 120.1 (5) C18—C17—H17 120.0
C12—N1—C9 120.5 (4) C17—C16—C15 120.0 (12)
C12—N1—Cd1 124.6 (4) C17—C16—H16 120.0
C9—N1—Cd1 114.9 (3) C15—C16—H16 120.0
N1—C12—C11 122.5 (6) C17—C18—C19 120.0 (10)
N1—C12—H12 118.7 C17—C18—H18 120.0
C11—C12—H12 118.7 C19—C18—H18 120.0
C10—C8—C7 123.6 (6)

Symmetry codes: (i) −x, y, −z+1/2.

Footnotes

Supplementary data and figures for this paper are available from the IUCr electronic archives (Reference: ZQ2105).

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Associated Data

This section collects any data citations, data availability statements, or supplementary materials included in this article.

Supplementary Materials

Crystal structure: contains datablock(s) I, global. DOI: 10.1107/S1600536811022185/zq2105sup1.cif

e-67-0m919-sup1.cif (19.8KB, cif)

Structure factors: contains datablock(s) I. DOI: 10.1107/S1600536811022185/zq2105Isup2.hkl

e-67-0m919-Isup2.hkl (199.5KB, hkl)

Additional supplementary materials: crystallographic information; 3D view; checkCIF report


Articles from Acta Crystallographica Section E: Structure Reports Online are provided here courtesy of International Union of Crystallography

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