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Acta Crystallographica Section E: Structure Reports Online logoLink to Acta Crystallographica Section E: Structure Reports Online
. 2011 Jun 30;67(Pt 7):m1008. doi: 10.1107/S1600536811025116

(2-Acetyl­phenolato)(2-{1-[2-(morpholin-4-yl)ethyl­imino]­eth­yl}phenolato)(thio­cyanato-κN)­cobalt(III)

Chen-Yi Wang a,*
PMCID: PMC3151850  PMID: 21836833

Abstract

The title mononuclear cobalt(III) complex, [Co(C14H19N2O2)(C8H7O2)(NCS)], was obtained by the reaction of 2-acetyl­phenol, 2-(morpholin-4-yl)ethyl­amine, ammonium thio­cyan­ate and cobalt nitrate in methanol. The CoIII atom is coordinated by one phenolate O, one imine N, and one amine N atom of the tridentate Schiff base ligand, two O atoms of the 2-acetyl­phenolate anion and one thio­cyanate N atom. This results in a fairly regular fac-CoN3O3 octa­hedral coordination geometry for the metal ion. The dihedral angle between the two benzene rings is 88.3 (3)°.

Related literature

For background to urease inhibitors, see: Wang (2009); Wang & Ye (2011). For similar cobalt(III) complexes, see: Li et al. (2007, 2008); Liu (2010); Wu et al. (2011).graphic file with name e-67-m1008-scheme1.jpg

Experimental

Crystal data

  • [Co(C14H19N2O2)(C8H7O2)(NCS)]

  • M r = 499.46

  • Monoclinic, Inline graphic

  • a = 8.145 (2) Å

  • b = 15.801 (2) Å

  • c = 17.702 (3) Å

  • β = 102.687 (3)°

  • V = 2222.6 (7) Å3

  • Z = 4

  • Mo Kα radiation

  • μ = 0.90 mm−1

  • T = 298 K

  • 0.32 × 0.30 × 0.28 mm

Data collection

  • Bruker SMART CCD diffractometer

  • Absorption correction: multi-scan (SADABS; Sheldrick, 1996) T min = 0.761, T max = 0.786

  • 13159 measured reflections

  • 4588 independent reflections

  • 2764 reflections with I > 2σ(I)

  • R int = 0.047

Refinement

  • R[F 2 > 2σ(F 2)] = 0.041

  • wR(F 2) = 0.101

  • S = 1.03

  • 4588 reflections

  • 291 parameters

  • H-atom parameters constrained

  • Δρmax = 0.24 e Å−3

  • Δρmin = −0.22 e Å−3

Data collection: SMART (Bruker, 1998); cell refinement: SAINT (Bruker, 1998); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: SHELXTL (Sheldrick, 2008); software used to prepare material for publication: SHELXTL.

Supplementary Material

Crystal structure: contains datablock(s) global, I. DOI: 10.1107/S1600536811025116/hb5932sup1.cif

e-67-m1008-sup1.cif (20.3KB, cif)

Structure factors: contains datablock(s) I. DOI: 10.1107/S1600536811025116/hb5932Isup2.hkl

e-67-m1008-Isup2.hkl (224.8KB, hkl)

Additional supplementary materials: crystallographic information; 3D view; checkCIF report

Table 1. Selected bond lengths (Å).

Co1—O1 1.9094 (19)
Co1—O2 1.8621 (18)
Co1—O3 1.8624 (19)
Co1—N1 1.894 (2)
Co1—N3 1.914 (3)
Co1—N2 2.054 (2)

Acknowledgments

This work was supported financially by the Natural Science Foundation of China (No. 31071856), the Natural Science Foundation of Zhejiang Province (No. Y407318) and the Applied Research Project on Nonprofit Technology of Zhejiang Province (No. 2010 C32060).

supplementary crystallographic information

Comment

As part of our investigations into urease inhibitors (Wang & Ye, 2011; Wang, 2009), we have synthesized the title compound, a new mononuclear cobalt(III) complex, Fig. 1. The Co atom in the complex is six-coordinated by one phenolate O, one imine N, and one amine N atoms of a Schiff base ligand 2-[1-(2-morpholin-4-ylethylimino)ethyl]phenolate, two O atoms of 2-acetylphenolate, and one thiocyanate N atom, forming an octahedral geometry. The dihedral angle between the two benzene rings are 88.3 (3) °. The three trans angles at Co atom are in the range 175.1 (1)–177.5 (1)°; the other angles are close to 90°, ranging from 84.4 (1) to 94.2 (1)° (Table 1), indicating a slightly distorted octahedral coordination. The Co–O and Co–N bond lengths (Table 1) are typical and are comparable with those observed in other similar cobalt(III) complexes (Li et al., 2007; Liu, 2010; Li et al., 2008; Wu et al., 2011).

Experimental

2-Acetylphenol (1.0 mmol, 0.136 g), 2-morpholin-4-ylethylamine (0.5 mmol, 0.065 g), ammonium thiocyanate (1.0 mmol, 0.076 g), and cobalt nitrate hexahydrate (0.5 mmol, 0.145 g) were dissolved in MeOH (30 ml). The mixture was stirred at room temperature for 10 min to give a clear deep brown solution. After keeping the solution in air for a week, brown block-shaped crystals were formed at the bottom of the vessel.

Refinement

All H atoms were placed in geometrically idealized positions and constrained to ride on their parent atoms, with C—H distances in the range 0.93–0.97 Å, and with Uiso(H) set at 1.2Ueq(C) and 1.5Ueq(methyl C).

Figures

Fig. 1.

Fig. 1.

The molecular structure of the title compound, showing displacement ellipsoids drawn at the 30% probability level.

Crystal data

[Co(C14H19N2O2)(C8H7O2)(NCS)] F(000) = 1040
Mr = 499.46 Dx = 1.493 Mg m3
Monoclinic, P21/c Mo Kα radiation, λ = 0.71073 Å
a = 8.145 (2) Å Cell parameters from 2215 reflections
b = 15.801 (2) Å θ = 2.5–24.5°
c = 17.702 (3) Å µ = 0.90 mm1
β = 102.687 (3)° T = 298 K
V = 2222.6 (7) Å3 Block, brown
Z = 4 0.32 × 0.30 × 0.28 mm

Data collection

Bruker SMART CCD diffractometer 4588 independent reflections
Radiation source: fine-focus sealed tube 2764 reflections with I > 2σ(I)
graphite Rint = 0.047
ω scans θmax = 26.5°, θmin = 2.6°
Absorption correction: multi-scan (SADABS; Sheldrick, 1996) h = −10→9
Tmin = 0.761, Tmax = 0.786 k = −15→19
13159 measured reflections l = −21→22

Refinement

Refinement on F2 Primary atom site location: structure-invariant direct methods
Least-squares matrix: full Secondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.041 Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.101 H-atom parameters constrained
S = 1.03 w = 1/[σ2(Fo2) + (0.0387P)2 + 0.1364P] where P = (Fo2 + 2Fc2)/3
4588 reflections (Δ/σ)max < 0.001
291 parameters Δρmax = 0.24 e Å3
0 restraints Δρmin = −0.22 e Å3

Special details

Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.

Fractional atomic coordinates and isotropic or equivalent isotropic displacement parameters (Å2)

x y z Uiso*/Ueq
Co1 0.10480 (5) 0.75033 (2) 0.40903 (2) 0.04240 (14)
N1 0.2071 (3) 0.84863 (14) 0.45991 (14) 0.0451 (6)
N2 0.2519 (3) 0.76544 (13) 0.32944 (13) 0.0423 (6)
N3 −0.0691 (3) 0.81713 (16) 0.34625 (15) 0.0553 (7)
O1 0.0119 (2) 0.64890 (12) 0.35843 (11) 0.0511 (5)
O2 0.2783 (2) 0.69333 (11) 0.47566 (10) 0.0445 (5)
O3 −0.0305 (2) 0.73184 (12) 0.47967 (12) 0.0545 (6)
O4 0.3888 (3) 0.69744 (15) 0.20174 (14) 0.0762 (7)
S1 −0.30242 (11) 0.92290 (6) 0.25423 (5) 0.0708 (3)
C1 0.1654 (3) 0.55174 (17) 0.45072 (16) 0.0406 (7)
C2 0.1808 (4) 0.46685 (18) 0.47754 (18) 0.0481 (7)
H2 0.1094 0.4261 0.4501 0.058*
C3 0.2958 (4) 0.44293 (19) 0.54166 (18) 0.0542 (8)
H3 0.3012 0.3870 0.5585 0.065*
C4 0.4056 (4) 0.5034 (2) 0.58189 (17) 0.0510 (8)
H4 0.4868 0.4873 0.6251 0.061*
C5 0.3955 (3) 0.58572 (18) 0.55864 (16) 0.0432 (7)
H5 0.4701 0.6249 0.5866 0.052*
C6 0.2756 (3) 0.61332 (18) 0.49350 (16) 0.0399 (7)
C7 0.0426 (3) 0.57306 (18) 0.38210 (17) 0.0429 (7)
C8 −0.0548 (4) 0.50563 (19) 0.33162 (17) 0.0603 (9)
H8A −0.1453 0.5311 0.2947 0.090*
H8B −0.0997 0.4662 0.3631 0.090*
H8C 0.0185 0.4763 0.3047 0.090*
C9 −0.0742 (4) 0.79083 (19) 0.52384 (16) 0.0465 (7)
C10 −0.2153 (4) 0.7738 (2) 0.55482 (18) 0.0576 (9)
H10 −0.2744 0.7236 0.5419 0.069*
C11 −0.2673 (4) 0.8297 (2) 0.60370 (19) 0.0673 (9)
H11 −0.3606 0.8169 0.6239 0.081*
C12 −0.1830 (5) 0.9046 (2) 0.62323 (19) 0.0711 (10)
H12 −0.2208 0.9431 0.6553 0.085*
C13 −0.0427 (4) 0.9222 (2) 0.59514 (17) 0.0614 (9)
H13 0.0156 0.9722 0.6100 0.074*
C14 0.0158 (4) 0.86696 (18) 0.54447 (16) 0.0468 (7)
C15 0.1688 (4) 0.88750 (17) 0.51812 (17) 0.0473 (7)
C16 0.2859 (4) 0.95472 (19) 0.56150 (17) 0.0659 (9)
H16A 0.3996 0.9422 0.5584 0.099*
H16B 0.2779 0.9553 0.6148 0.099*
H16C 0.2544 1.0091 0.5388 0.099*
C17 0.3581 (4) 0.86927 (19) 0.43098 (18) 0.0557 (8)
H17A 0.4518 0.8344 0.4566 0.067*
H17B 0.3883 0.9282 0.4414 0.067*
C18 0.3200 (4) 0.85313 (18) 0.34579 (17) 0.0535 (8)
H18A 0.4217 0.8595 0.3263 0.064*
H18B 0.2381 0.8940 0.3196 0.064*
C19 0.1570 (4) 0.75906 (19) 0.24703 (16) 0.0548 (8)
H19A 0.0748 0.8043 0.2363 0.066*
H19B 0.0967 0.7057 0.2397 0.066*
C20 0.2705 (5) 0.7645 (2) 0.19053 (18) 0.0676 (10)
H20A 0.2031 0.7622 0.1381 0.081*
H20B 0.3298 0.8181 0.1971 0.081*
C21 0.4903 (4) 0.7038 (2) 0.2774 (2) 0.0716 (10)
H21A 0.5525 0.7566 0.2820 0.086*
H21B 0.5712 0.6578 0.2857 0.086*
C22 0.3886 (3) 0.70057 (19) 0.33915 (17) 0.0545 (8)
H22A 0.3387 0.6448 0.3388 0.065*
H22B 0.4638 0.7085 0.3893 0.065*
C23 −0.1659 (4) 0.86167 (19) 0.30900 (18) 0.0475 (8)

Atomic displacement parameters (Å2)

U11 U22 U33 U12 U13 U23
Co1 0.0373 (2) 0.0384 (2) 0.0506 (3) −0.00521 (18) 0.00765 (17) −0.00324 (19)
N1 0.0408 (14) 0.0395 (14) 0.0524 (16) −0.0071 (11) 0.0048 (12) −0.0005 (12)
N2 0.0401 (13) 0.0395 (15) 0.0455 (14) −0.0035 (11) 0.0054 (11) 0.0020 (11)
N3 0.0447 (16) 0.0499 (16) 0.0682 (19) 0.0013 (13) 0.0055 (14) −0.0069 (14)
O1 0.0479 (12) 0.0509 (14) 0.0541 (13) −0.0085 (10) 0.0101 (10) −0.0053 (10)
O2 0.0446 (11) 0.0380 (12) 0.0486 (12) −0.0066 (9) 0.0053 (9) 0.0015 (10)
O3 0.0544 (13) 0.0459 (13) 0.0688 (15) −0.0115 (10) 0.0257 (12) −0.0131 (10)
O4 0.0883 (18) 0.0750 (18) 0.0742 (17) −0.0075 (15) 0.0372 (15) −0.0125 (14)
S1 0.0555 (5) 0.0781 (7) 0.0741 (6) 0.0045 (5) 0.0040 (5) 0.0192 (5)
C1 0.0392 (16) 0.0378 (17) 0.0484 (18) −0.0029 (13) 0.0175 (14) −0.0080 (14)
C2 0.0455 (17) 0.0415 (18) 0.061 (2) −0.0057 (15) 0.0198 (16) −0.0056 (16)
C3 0.061 (2) 0.0387 (18) 0.066 (2) 0.0023 (16) 0.0217 (18) 0.0027 (16)
C4 0.0480 (18) 0.053 (2) 0.0512 (19) 0.0055 (16) 0.0098 (15) 0.0027 (16)
C5 0.0437 (17) 0.0459 (18) 0.0406 (17) −0.0035 (14) 0.0104 (14) −0.0018 (14)
C6 0.0390 (16) 0.0432 (18) 0.0419 (18) −0.0041 (14) 0.0187 (14) −0.0045 (14)
C7 0.0395 (16) 0.0409 (18) 0.0525 (19) −0.0070 (14) 0.0192 (14) −0.0069 (15)
C8 0.061 (2) 0.056 (2) 0.063 (2) −0.0134 (17) 0.0116 (17) −0.0185 (17)
C9 0.0444 (17) 0.0449 (18) 0.0476 (18) 0.0045 (15) 0.0048 (14) −0.0029 (15)
C10 0.052 (2) 0.061 (2) 0.062 (2) −0.0026 (16) 0.0190 (17) −0.0055 (17)
C11 0.066 (2) 0.079 (3) 0.061 (2) 0.008 (2) 0.0220 (19) −0.003 (2)
C12 0.082 (3) 0.072 (3) 0.061 (2) 0.017 (2) 0.020 (2) −0.014 (2)
C13 0.079 (2) 0.050 (2) 0.053 (2) 0.0022 (18) 0.0078 (19) −0.0107 (16)
C14 0.0533 (18) 0.0416 (18) 0.0418 (18) 0.0037 (15) 0.0024 (15) 0.0011 (14)
C15 0.0552 (19) 0.0342 (16) 0.0464 (19) 0.0005 (15) −0.0023 (16) 0.0064 (14)
C16 0.077 (2) 0.052 (2) 0.062 (2) −0.0169 (18) 0.0025 (19) −0.0124 (17)
C17 0.0499 (19) 0.0502 (19) 0.067 (2) −0.0137 (15) 0.0132 (17) −0.0100 (17)
C18 0.0531 (19) 0.0438 (19) 0.065 (2) −0.0103 (15) 0.0165 (16) 0.0020 (16)
C19 0.0546 (19) 0.060 (2) 0.0465 (19) −0.0074 (16) 0.0047 (15) 0.0000 (16)
C20 0.078 (2) 0.077 (3) 0.048 (2) −0.015 (2) 0.0146 (18) −0.0008 (18)
C21 0.060 (2) 0.074 (3) 0.088 (3) 0.006 (2) 0.033 (2) 0.010 (2)
C22 0.0481 (18) 0.052 (2) 0.068 (2) 0.0062 (16) 0.0220 (16) 0.0108 (17)
C23 0.0411 (18) 0.0464 (19) 0.057 (2) −0.0080 (15) 0.0137 (15) −0.0085 (16)

Geometric parameters (Å, °)

Co1—O1 1.9094 (19) C8—H8C 0.9600
Co1—O2 1.8621 (18) C9—C10 1.404 (4)
Co1—O3 1.8624 (19) C9—C14 1.414 (4)
Co1—N1 1.894 (2) C10—C11 1.368 (4)
Co1—N3 1.914 (3) C10—H10 0.9300
Co1—N2 2.054 (2) C11—C12 1.374 (4)
N1—C15 1.295 (3) C11—H11 0.9300
N1—C17 1.469 (3) C12—C13 1.371 (4)
N2—C22 1.495 (3) C12—H12 0.9300
N2—C19 1.497 (3) C13—C14 1.408 (4)
N2—C18 1.497 (3) C13—H13 0.9300
N3—C23 1.150 (3) C14—C15 1.460 (4)
O1—C7 1.276 (3) C15—C16 1.519 (4)
O2—C6 1.304 (3) C16—H16A 0.9600
O3—C9 1.315 (3) C16—H16B 0.9600
O4—C21 1.415 (4) C16—H16C 0.9600
O4—C20 1.416 (4) C17—C18 1.493 (4)
S1—C23 1.625 (3) C17—H17A 0.9700
C1—C2 1.419 (4) C17—H17B 0.9700
C1—C6 1.424 (4) C18—H18A 0.9700
C1—C7 1.434 (4) C18—H18B 0.9700
C2—C3 1.357 (4) C19—C20 1.506 (4)
C2—H2 0.9300 C19—H19A 0.9700
C3—C4 1.393 (4) C19—H19B 0.9700
C3—H3 0.9300 C20—H20A 0.9700
C4—C5 1.362 (4) C20—H20B 0.9700
C4—H4 0.9300 C21—C22 1.510 (4)
C5—C6 1.407 (4) C21—H21A 0.9700
C5—H5 0.9300 C21—H21B 0.9700
C7—C8 1.500 (4) C22—H22A 0.9700
C8—H8A 0.9600 C22—H22B 0.9700
C8—H8B 0.9600
O2—Co1—O3 88.70 (8) C11—C10—H10 119.4
O2—Co1—N1 84.38 (9) C9—C10—H10 119.4
O3—Co1—N1 94.17 (9) C10—C11—C12 120.6 (3)
O2—Co1—O1 93.36 (8) C10—C11—H11 119.7
O3—Co1—O1 87.21 (8) C12—C11—H11 119.7
N1—Co1—O1 177.31 (9) C13—C12—C11 119.6 (3)
O2—Co1—N3 175.10 (9) C13—C12—H12 120.2
O3—Co1—N3 90.27 (10) C11—C12—H12 120.2
N1—Co1—N3 90.93 (10) C12—C13—C14 122.1 (3)
O1—Co1—N3 91.38 (9) C12—C13—H13 119.0
O2—Co1—N2 90.86 (8) C14—C13—H13 119.0
O3—Co1—N2 177.51 (8) C13—C14—C9 117.6 (3)
N1—Co1—N2 88.22 (9) C13—C14—C15 119.9 (3)
O1—Co1—N2 90.37 (8) C9—C14—C15 122.5 (3)
N3—Co1—N2 90.37 (10) N1—C15—C14 121.4 (3)
C15—N1—C17 122.6 (2) N1—C15—C16 120.0 (3)
C15—N1—Co1 127.5 (2) C14—C15—C16 118.7 (3)
C17—N1—Co1 109.32 (18) C15—C16—H16A 109.5
C22—N2—C19 106.1 (2) C15—C16—H16B 109.5
C22—N2—C18 112.2 (2) H16A—C16—H16B 109.5
C19—N2—C18 109.9 (2) C15—C16—H16C 109.5
C22—N2—Co1 111.92 (16) H16A—C16—H16C 109.5
C19—N2—Co1 114.01 (17) H16B—C16—H16C 109.5
C18—N2—Co1 102.84 (16) N1—C17—C18 108.0 (2)
C23—N3—Co1 175.3 (2) N1—C17—H17A 110.1
C7—O1—Co1 127.26 (19) C18—C17—H17A 110.1
C6—O2—Co1 124.85 (17) N1—C17—H17B 110.1
C9—O3—Co1 124.42 (18) C18—C17—H17B 110.1
C21—O4—C20 108.5 (3) H17A—C17—H17B 108.4
C2—C1—C6 118.0 (3) C17—C18—N2 109.8 (2)
C2—C1—C7 119.9 (3) C17—C18—H18A 109.7
C6—C1—C7 122.1 (3) N2—C18—H18A 109.7
C3—C2—C1 122.5 (3) C17—C18—H18B 109.7
C3—C2—H2 118.8 N2—C18—H18B 109.7
C1—C2—H2 118.8 H18A—C18—H18B 108.2
C2—C3—C4 119.0 (3) N2—C19—C20 112.5 (2)
C2—C3—H3 120.5 N2—C19—H19A 109.1
C4—C3—H3 120.5 C20—C19—H19A 109.1
C5—C4—C3 120.8 (3) N2—C19—H19B 109.1
C5—C4—H4 119.6 C20—C19—H19B 109.1
C3—C4—H4 119.6 H19A—C19—H19B 107.8
C4—C5—C6 121.9 (3) O4—C20—C19 111.3 (3)
C4—C5—H5 119.0 O4—C20—H20A 109.4
C6—C5—H5 119.0 C19—C20—H20A 109.4
O2—C6—C5 117.0 (3) O4—C20—H20B 109.4
O2—C6—C1 125.2 (3) C19—C20—H20B 109.4
C5—C6—C1 117.9 (3) H20A—C20—H20B 108.0
O1—C7—C1 123.3 (3) O4—C21—C22 112.6 (3)
O1—C7—C8 115.6 (3) O4—C21—H21A 109.1
C1—C7—C8 121.1 (3) C22—C21—H21A 109.1
C7—C8—H8A 109.5 O4—C21—H21B 109.1
C7—C8—H8B 109.5 C22—C21—H21B 109.1
H8A—C8—H8B 109.5 H21A—C21—H21B 107.8
C7—C8—H8C 109.5 N2—C22—C21 114.0 (2)
H8A—C8—H8C 109.5 N2—C22—H22A 108.8
H8B—C8—H8C 109.5 C21—C22—H22A 108.8
O3—C9—C10 116.6 (3) N2—C22—H22B 108.8
O3—C9—C14 124.3 (3) C21—C22—H22B 108.8
C10—C9—C14 119.0 (3) H22A—C22—H22B 107.6
C11—C10—C9 121.1 (3) N3—C23—S1 178.3 (3)

Footnotes

Supplementary data and figures for this paper are available from the IUCr electronic archives (Reference: HB5932).

References

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Associated Data

This section collects any data citations, data availability statements, or supplementary materials included in this article.

Supplementary Materials

Crystal structure: contains datablock(s) global, I. DOI: 10.1107/S1600536811025116/hb5932sup1.cif

e-67-m1008-sup1.cif (20.3KB, cif)

Structure factors: contains datablock(s) I. DOI: 10.1107/S1600536811025116/hb5932Isup2.hkl

e-67-m1008-Isup2.hkl (224.8KB, hkl)

Additional supplementary materials: crystallographic information; 3D view; checkCIF report


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