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Acta Crystallographica Section E: Structure Reports Online logoLink to Acta Crystallographica Section E: Structure Reports Online
. 2011 Jun 11;67(Pt 7):m913. doi: 10.1107/S1600536811021118

catena-Poly[[diaqua­bis­(formato-κO)cobalt(II)]-μ2-2,6-bis­(pyridin-4-yl)-4,4′-bipyridine-κ2 N 2:N 6]

De-Yun Ma a, De-En Sun a, Guo-Qing Li a,*
PMCID: PMC3151864  PMID: 21836898

Abstract

In the title complex, [Co(CHO2)2(C20H14N4)(H2O)2]n, the CoII ion, lying on an inversion center, is six-coordinated by two O atoms from two monodentate formate ligands, two N atoms from two 2,6-bis­(pyridin-4-yl)-4,4′-bipyridine (4-pybpy) ligands and two water mol­ecules, displaying an octa­hedral geometry. The 4-pybpy ligand, having a twofold rotation axis, functions in a bridging coordination mode, connecting the CoII ions into a corrugated chain along [Inline graphic01]. The chains are further linked into a three-dimensional supra­molecular network by O—H⋯O, C—H⋯N and C—H⋯O hydrogen bonds and π–π stacking inter­actions between the pyridine rings [centroid-to-centroid distance = 3.743 (2) Å].

Related literature

For general background to complexes with 2,6-bis­(4-pyrid­yl)-4,4′-bipyridine, see: Liu et al. (2009); Yoshida et al. (2007).graphic file with name e-67-0m913-scheme1.jpg

Experimental

Crystal data

  • [Co(CHO2)2(C20H14N4)(H2O)2]

  • M r = 495.35

  • Monoclinic, Inline graphic

  • a = 24.412 (5) Å

  • b = 11.073 (2) Å

  • c = 7.4117 (15) Å

  • β = 91.28 (3)°

  • V = 2003.0 (7) Å3

  • Z = 4

  • Mo Kα radiation

  • μ = 0.91 mm−1

  • T = 293 K

  • 0.30 × 0.26 × 0.21 mm

Data collection

  • Rigaku/MSC Mercury CCD diffractometer

  • Absorption correction: multi-scan (CrystalStructure; Rigaku/MSC, 2002) T min = 0.075, T max = 0.126

  • 9417 measured reflections

  • 2303 independent reflections

  • 1544 reflections with I > 2σ(I)

  • R int = 0.063

Refinement

  • R[F 2 > 2σ(F 2)] = 0.044

  • wR(F 2) = 0.112

  • S = 1.11

  • 2303 reflections

  • 160 parameters

  • 3 restraints

  • H atoms treated by a mixture of independent and constrained refinement

  • Δρmax = 0.76 e Å−3

  • Δρmin = −0.57 e Å−3

Data collection: CrystalStructure (Rigaku/MSC, 2002); cell refinement: CrystalStructure; data reduction: CrystalStructure; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: SHELXTL (Sheldrick, 2008) and Mercury (Macrae et al., 2008); software used to prepare material for publication: SHELXTL.

Supplementary Material

Crystal structure: contains datablock(s) I, global. DOI: 10.1107/S1600536811021118/hy2424sup1.cif

e-67-0m913-sup1.cif (20.5KB, cif)

Structure factors: contains datablock(s) I. DOI: 10.1107/S1600536811021118/hy2424Isup2.hkl

e-67-0m913-Isup2.hkl (113.3KB, hkl)

Additional supplementary materials: crystallographic information; 3D view; checkCIF report

Table 1. Hydrogen-bond geometry (Å, °).

D—H⋯A D—H H⋯A DA D—H⋯A
O1W—H1W⋯O2i 0.82 (1) 1.97 (1) 2.775 (3) 166 (4)
O1W—H2W⋯O2ii 0.82 (1) 1.99 (1) 2.814 (3) 174 (3)
C2—H2⋯N3iii 0.93 2.62 3.458 (3) 150
C5—H5⋯O2ii 0.93 2.53 3.429 (4) 164

Symmetry codes: (i) Inline graphic; (ii) Inline graphic; (iii) Inline graphic.

Acknowledgments

The authors acknowledge South China University of Technology for supporting this work.

supplementary crystallographic information

Comment

In the structural investigation of 2,6-bis(4-pyridyl)-4,4'-bipyridine (4-pybpy) complexes, it has been found that 4-pybpy functions as a multidentate ligand (Liu et al., 2009; Yoshida et al., 2007), with versatile binding and coordination modes. In this paper, we report the crystal structure of the title compound, a new CoII complex obtained by the reaction of 4-pybpy, cobaltous nitrate hexahydrate in DMF solution.

As depicted in Fig. 1, the CoII atom, lying on an inversion center, is coordinated by two O atoms from two formate anions, two N atoms from two 4-pybpy ligands and two water molecules. The coordination environment of the CoII atom can be described as octahedral. The 4-pybpy ligands link CoII ions, forming infinite chains, with a Co···Co separation of 12.835 (2) Å (Fig. 2). These chains are further self-assembled into a three-dimensional supramolecular network via intermolecular O—H···O and C—H···O hydrogen bonds (Table 1) involving the water molecules as donors and O atoms of the formate groups as acceptors, and π–π stacking interactions between the pyridyl rings of neighboring 4-pybpy ligands (Fig. 3). The centroid–centroid distance is 3.743 (2) Å.

Experimental

A mixture of 4-pybpy (0.155 g, 0.5 mmol), cobalt nitrate hexahydrate (0.145 g, 0.5 mmol) and DMF (15 ml) was placed in a 23 ml Teflon-lined reactor, which was heated at 358 K for 2 d, and then cooled to room temperature at a rate of 10 K h-1. Block purple crystals obtained were washed with water and dried in air (yield: 45% based on Co).

Refinement

H atoms on C atoms were placed at calculated positions and treated as riding atoms, with C—H = 0.93 Å and with Uiso(H) = 1.2Ueq(C). Water H atoms were tentatively located in difference Fourier maps and were refined with distance restraints of O—H = 0.82 (1) and H···H = 1.39 (1) Å and with Uiso(H) = 1.5Ueq(O). The highest peak is located 0.28 Å from H12A and the deepest hole is located 0.90 Å from Co1.

Figures

Fig. 1.

Fig. 1.

The structure of the title compound, showing 30% probability displacement ellipsoids. H atoms were omitted for clarity. [Symmetry codes: (i) 1/2 - x, 5/2 - y, -z; (ii) -x, y, 1/2 - z.]

Fig. 2.

Fig. 2.

View of the corrugated chain. H atoms were omitted for clarity.

Fig. 3.

Fig. 3.

Crystal packing of the title compound. Hydrogen bonds and π–π stacking interactions are shown as dashed lines.

Crystal data

[Co(CHO2)2(C20H14N4)(H2O)2] F(000) = 1020
Mr = 495.35 Dx = 1.643 Mg m3
Monoclinic, C2/c Mo Kα radiation, λ = 0.71073 Å
Hall symbol: -C 2yc Cell parameters from 2895 reflections
a = 24.412 (5) Å θ = 2.4–27.9°
b = 11.073 (2) Å µ = 0.91 mm1
c = 7.4117 (15) Å T = 293 K
β = 91.28 (3)° Block, purple
V = 2003.0 (7) Å3 0.30 × 0.26 × 0.21 mm
Z = 4

Data collection

Rigaku/MSC Mercury CCD diffractometer 2303 independent reflections
Radiation source: fine-focus sealed tube 1544 reflections with I > 2σ(I)
graphite Rint = 0.063
ω scans θmax = 27.5°, θmin = 3.1°
Absorption correction: multi-scan (CrystalStructure; Rigaku/MSC, 2002) h = −31→31
Tmin = 0.075, Tmax = 0.126 k = −14→14
9417 measured reflections l = −9→8

Refinement

Refinement on F2 Primary atom site location: structure-invariant direct methods
Least-squares matrix: full Secondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.044 Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.112 H atoms treated by a mixture of independent and constrained refinement
S = 1.11 w = 1/[σ2(Fo2) + (0.040P)2 + 3.P] where P = (Fo2 + 2Fc2)/3
2303 reflections (Δ/σ)max < 0.001
160 parameters Δρmax = 0.76 e Å3
3 restraints Δρmin = −0.57 e Å3

Fractional atomic coordinates and isotropic or equivalent isotropic displacement parameters (Å2)

x y z Uiso*/Ueq
Co1 0.2500 1.2500 0.0000 0.02543 (18)
O1W 0.30131 (10) 1.13065 (19) 0.1536 (3) 0.0321 (5)
H1W 0.2998 (17) 1.132 (3) 0.2643 (14) 0.048*
H2W 0.3056 (16) 1.0629 (15) 0.110 (4) 0.048*
O1 0.22769 (10) 1.35749 (18) 0.2125 (3) 0.0329 (5)
O2 0.18853 (10) 1.3927 (2) 0.4744 (3) 0.0384 (6)
N1 0.17914 (11) 1.1358 (2) 0.0338 (3) 0.0271 (6)
N2 0.0000 0.9831 (3) 0.2500 0.0285 (8)
N3 0.0000 0.3497 (4) 0.2500 0.0466 (11)
C1 0.13056 (14) 1.1840 (3) 0.0711 (4) 0.0308 (7)
H1 0.1269 1.2675 0.0632 0.037*
C2 0.08571 (14) 1.1183 (3) 0.1202 (4) 0.0300 (7)
H2 0.0528 1.1564 0.1458 0.036*
C3 0.09050 (13) 0.9933 (3) 0.1310 (4) 0.0255 (7)
C4 0.13993 (14) 0.9416 (3) 0.0889 (4) 0.0303 (7)
H4 0.1444 0.8583 0.0929 0.036*
C5 0.18262 (14) 1.0151 (3) 0.0409 (4) 0.0290 (7)
H5 0.2157 0.9791 0.0117 0.035*
C6 0.04323 (13) 0.9200 (3) 0.1906 (4) 0.0266 (7)
C7 0.04429 (12) 0.7978 (2) 0.1879 (4) 0.0221 (6)
H7 0.0744 0.7564 0.1447 0.027*
C8 0.0000 0.7374 (4) 0.2500 0.0286 (9)
C9 0.0000 0.6031 (4) 0.2500 0.0325 (10)
C10 −0.04717 (16) 0.5383 (3) 0.2075 (5) 0.0386 (8)
H10 −0.0800 0.5778 0.1805 0.046*
C11 −0.04431 (18) 0.4138 (3) 0.2061 (5) 0.0466 (10)
H11 −0.0758 0.3716 0.1719 0.056*
C12 0.20695 (14) 1.3244 (3) 0.3573 (4) 0.0297 (7)
H12A 0.2052 1.2418 0.3790 0.036*

Atomic displacement parameters (Å2)

U11 U22 U33 U12 U13 U23
Co1 0.0309 (3) 0.0234 (3) 0.0222 (3) −0.0028 (3) 0.0045 (2) −0.0005 (2)
O1W 0.0425 (15) 0.0286 (11) 0.0252 (11) −0.0011 (10) 0.0021 (10) 0.0004 (9)
O1 0.0438 (15) 0.0292 (11) 0.0259 (11) −0.0069 (10) 0.0077 (10) −0.0032 (9)
O2 0.0456 (16) 0.0435 (13) 0.0265 (11) 0.0001 (11) 0.0083 (10) −0.0030 (11)
N1 0.0292 (15) 0.0256 (12) 0.0267 (13) −0.0016 (11) 0.0015 (11) −0.0010 (11)
N2 0.027 (2) 0.0286 (18) 0.0300 (18) 0.000 0.0020 (16) 0.000
N3 0.061 (3) 0.031 (2) 0.048 (3) 0.000 0.008 (2) 0.000
C1 0.032 (2) 0.0239 (15) 0.0368 (17) 0.0017 (13) 0.0008 (14) 0.0000 (13)
C2 0.0281 (19) 0.0259 (15) 0.0361 (17) 0.0022 (13) −0.0003 (13) −0.0048 (13)
C3 0.0302 (18) 0.0239 (14) 0.0222 (14) 0.0012 (12) −0.0013 (12) −0.0034 (12)
C4 0.035 (2) 0.0271 (15) 0.0286 (15) 0.0027 (14) 0.0045 (13) −0.0003 (13)
C5 0.0306 (19) 0.0278 (15) 0.0289 (15) 0.0000 (13) 0.0050 (13) −0.0024 (13)
C6 0.0289 (18) 0.0274 (15) 0.0234 (14) −0.0002 (13) 0.0010 (12) −0.0017 (13)
C7 0.0202 (16) 0.0197 (12) 0.0267 (14) 0.0008 (11) 0.0039 (12) −0.0011 (12)
C8 0.027 (2) 0.029 (2) 0.030 (2) 0.000 0.0002 (17) 0.000
C9 0.037 (3) 0.029 (2) 0.031 (2) 0.000 0.003 (2) 0.000
C10 0.040 (2) 0.0339 (17) 0.0419 (19) −0.0055 (15) −0.0007 (16) 0.0043 (15)
C11 0.057 (3) 0.0375 (19) 0.046 (2) −0.0155 (18) 0.0002 (18) 0.0001 (17)
C12 0.0324 (19) 0.0323 (16) 0.0245 (14) −0.0036 (14) 0.0025 (13) −0.0002 (14)

Geometric parameters (Å, °)

Co1—O1 2.057 (2) C2—C3 1.392 (4)
Co1—O1i 2.057 (2) C2—H2 0.9300
Co1—O1Wi 2.133 (2) C3—C4 1.377 (4)
Co1—O1W 2.133 (2) C3—C6 1.486 (4)
Co1—N1i 2.162 (3) C4—C5 1.375 (4)
Co1—N1 2.162 (3) C4—H4 0.9300
O1W—H1W 0.82 (1) C5—H5 0.9300
O1W—H2W 0.82 (1) C6—C7 1.353 (4)
O1—C12 1.251 (3) C7—C8 1.361 (3)
O2—C12 1.243 (4) C7—H7 0.9300
N1—C1 1.335 (4) C8—C7ii 1.361 (3)
N1—C5 1.341 (4) C8—C9 1.487 (6)
N2—C6 1.348 (4) C9—C10 1.387 (4)
N2—C6ii 1.348 (4) C9—C10ii 1.387 (4)
N3—C11ii 1.328 (5) C10—C11 1.381 (5)
N3—C11 1.328 (5) C10—H10 0.9300
C1—C2 1.371 (4) C11—H11 0.9300
C1—H1 0.9300 C12—H12A 0.9300
O1—Co1—O1i 180.0 C4—C3—C2 118.2 (3)
O1—Co1—O1Wi 83.56 (9) C4—C3—C6 122.1 (3)
O1i—Co1—O1Wi 96.44 (9) C2—C3—C6 119.7 (3)
O1—Co1—O1W 96.44 (9) C5—C4—C3 119.1 (3)
O1i—Co1—O1W 83.56 (9) C5—C4—H4 120.5
O1Wi—Co1—O1W 180.0 C3—C4—H4 120.5
O1—Co1—N1i 88.67 (9) N1—C5—C4 123.5 (3)
O1i—Co1—N1i 91.33 (9) N1—C5—H5 118.2
O1Wi—Co1—N1i 92.16 (9) C4—C5—H5 118.2
O1W—Co1—N1i 87.84 (9) N2—C6—C7 122.6 (3)
O1—Co1—N1 91.33 (9) N2—C6—C3 115.6 (3)
O1i—Co1—N1 88.67 (9) C7—C6—C3 121.7 (3)
O1Wi—Co1—N1 87.84 (9) C6—C7—C8 118.1 (3)
O1W—Co1—N1 92.16 (9) C6—C7—H7 121.0
N1i—Co1—N1 180.0 C8—C7—H7 121.0
Co1—O1W—H1W 119 (2) C7—C8—C7ii 121.1 (4)
Co1—O1W—H2W 116 (2) C7—C8—C9 119.5 (2)
H1W—O1W—H2W 114.8 (18) C7ii—C8—C9 119.5 (2)
C12—O1—Co1 127.3 (2) C10—C9—C10ii 117.7 (4)
C1—N1—C5 116.5 (3) C10—C9—C8 121.2 (2)
C1—N1—Co1 120.5 (2) C10ii—C9—C8 121.2 (2)
C5—N1—Co1 122.5 (2) C11—C10—C9 118.4 (4)
C6—N2—C6ii 117.5 (4) C11—C10—H10 120.8
C11ii—N3—C11 115.4 (4) C9—C10—H10 120.8
N1—C1—C2 124.1 (3) N3—C11—C10 125.0 (4)
N1—C1—H1 117.9 N3—C11—H11 117.5
C2—C1—H1 117.9 C10—C11—H11 117.5
C1—C2—C3 118.5 (3) O2—C12—O1 125.5 (3)
C1—C2—H2 120.8 O2—C12—H12A 117.2
C3—C2—H2 120.8 O1—C12—H12A 117.2

Symmetry codes: (i) −x+1/2, −y+5/2, −z; (ii) −x, y, −z+1/2.

Hydrogen-bond geometry (Å, °)

D—H···A D—H H···A D···A D—H···A
O1W—H1W···O2iii 0.82 (1) 1.97 (1) 2.775 (3) 166 (4)
O1W—H2W···O2iv 0.82 (1) 1.99 (1) 2.814 (3) 174 (3)
C2—H2···N3v 0.93 2.62 3.458 (3) 150
C5—H5···O2iv 0.93 2.53 3.429 (4) 164

Symmetry codes: (iii) −x+1/2, −y+5/2, −z+1; (iv) −x+1/2, y−1/2, −z+1/2; (v) x, y+1, z.

Footnotes

Supplementary data and figures for this paper are available from the IUCr electronic archives (Reference: HY2424).

References

  1. Liu, C., Ding, Y.-B., Shi, X.-H., Zhang, D., Hu, M.-H., Yin, Y.-G. & Li, D. (2009). Cryst. Growth Des. 9, 1275–1277.
  2. Macrae, C. F., Bruno, I. J., Chisholm, J. A., Edgington, P. R., McCabe, P., Pidcock, E., Rodriguez-Monge, L., Taylor, R., van de Streek, J. & Wood, P. A. (2008). J. Appl. Cryst. 41, 466–470.
  3. Rigaku/MSC (2002). CrystalStructure Rigaku/MSC, The Woodlands, Texas, USA.
  4. Sheldrick, G. M. (2008). Acta Cryst. A64, 112–122. [DOI] [PubMed]
  5. Yoshida, J., Nishikiori, S. & Kuroda, R. (2007). Chem. Lett. 36, 678–679.

Associated Data

This section collects any data citations, data availability statements, or supplementary materials included in this article.

Supplementary Materials

Crystal structure: contains datablock(s) I, global. DOI: 10.1107/S1600536811021118/hy2424sup1.cif

e-67-0m913-sup1.cif (20.5KB, cif)

Structure factors: contains datablock(s) I. DOI: 10.1107/S1600536811021118/hy2424Isup2.hkl

e-67-0m913-Isup2.hkl (113.3KB, hkl)

Additional supplementary materials: crystallographic information; 3D view; checkCIF report


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