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Acta Crystallographica Section E: Structure Reports Online logoLink to Acta Crystallographica Section E: Structure Reports Online
. 2011 Jun 18;67(Pt 7):o1681. doi: 10.1107/S1600536811021726

1-[(3-Chloro­phen­yl)(morpholin-4-yl)­meth­yl]naphthalen-2-ol

Li-Jin Shu a,*
PMCID: PMC3151918  PMID: 21837079

Abstract

In the title compound, C21H20ClNO2, the dihedral angle between the naphthyl­ene ring system and the phenyl ring is 77.86 (15)°. The morpholine ring adopts a chair conformation. The hydroxyl group is involved in intra­molecular O—H⋯N hydrogen bonding. A weak inter­molecular C—H⋯π inter­action is present in the crystal structure.

Related literature

For related structures, see: Devi & Bhuyan (2004); Domling & Ugi (2000); Fu et al. (2009). For multi-component reactions, see: Hulme & Gore (2003); Ugi (1962).graphic file with name e-67-o1681-scheme1.jpg

Experimental

Crystal data

  • C21H20ClNO2

  • M r = 353.83

  • Monoclinic, Inline graphic

  • a = 14.1896 (18) Å

  • b = 15.881 (2) Å

  • c = 10.3998 (10) Å

  • β = 132.13 (2)°

  • V = 1738.0 (7) Å3

  • Z = 4

  • Mo Kα radiation

  • μ = 0.23 mm−1

  • T = 298 K

  • 0.40 × 0.30 × 0.20 mm

Data collection

  • Rigaku Mercury2 diffractometer

  • Absorption correction: multi-scan (CrystalClear; Rigaku, 2005) T min = 0.89, T max = 1.00

  • 7216 measured reflections

  • 3127 independent reflections

  • 2050 reflections with I > 2σ(I)

  • R int = 0.105

Refinement

  • R[F 2 > 2σ(F 2)] = 0.085

  • wR(F 2) = 0.240

  • S = 0.99

  • 3127 reflections

  • 226 parameters

  • 2 restraints

  • H-atom parameters constrained

  • Δρmax = 0.33 e Å−3

  • Δρmin = −0.29 e Å−3

  • Absolute structure: Flack (1983), 1551 Friedel pairs

  • Flack parameter: 0.07 (16)

Data collection: CrystalClear (Rigaku, 2005); cell refinement: CrystalClear; data reduction: CrystalClear; program(s) used to solve structure: SHELXTL (Sheldrick, 2008); program(s) used to refine structure: SHELXTL; molecular graphics: SHELXTL; software used to prepare material for publication: SHELXTL.

Supplementary Material

Crystal structure: contains datablock(s) I, global. DOI: 10.1107/S1600536811021726/xu5238sup1.cif

e-67-o1681-sup1.cif (17.6KB, cif)

Structure factors: contains datablock(s) I. DOI: 10.1107/S1600536811021726/xu5238Isup2.hkl

e-67-o1681-Isup2.hkl (153.4KB, hkl)

Additional supplementary materials: crystallographic information; 3D view; checkCIF report

Table 1. Hydrogen-bond geometry (Å, °).

Cg is the centroid of the C3–C8 benzene ring.

D—H⋯A D—H H⋯A DA D—H⋯A
O1—H1A⋯N1 0.82 1.97 2.649 (6) 139
C21—H21ACgi 0.93 2.87 3.770 (7) 164

Symmetry code: (i) Inline graphic.

Acknowledgments

This work was supported by a start-up grant from Hangzhou Normal University, China.

supplementary crystallographic information

Comment

Multi-component reactions (MCRs) (Hulme & Gore, 2003; Ugi, 1962) involving at least three starting materials in a one-pot reaction have attracted considerable attention in terms of saving both energy and raw materials (Devi & Bhuyan, 2004; Fu, et al. 2009). Compared to conventional multi-step organic syntheses, MCRs have merits over multi-step reactions that include the simplicity of a one-pot procedure and the buildup of complex molecules (Domling & Ugi, 2000). We report here the synthesis and crystal structure of the title compound, 1-((3-chlorophenyl)(morpholino)methyl)naphthalen-2-ol.

In the title compound (Fig. 1) bond lengths and angles have normal values. The dihedral angle between the naphthylene ring system and the benzene ring is 77.86 (15)°. The H atom of hydroxyl is involved in strong intramolecular O—H···N hydrogen bonds (Table 1). Weak intermolecular C—H···π interaction is present in the crystal structure.

Experimental

A dry 50 ml flask was charged with 3-chlorobenzaldehyde (10 mmol), naphthalen-2-ol (10 mmol) and morpholine (10 mmol). The mixture was stirred at 373 K for 12 h and then added ethanol (15 ml), after heated under reflux for 1 h, the precipitate was filtered out and washed with ethanol for 3 times to give the title compound. Colourless crystals suitable for X-ray diffraction were obtained by slow evaporation of a dichloromethane solution.

Refinement

All the H atoms attached to C atoms were situated into the idealized positions and treated as riding with C–H = 0.93 Å (aromatic), 0.97 Å (methylene) and 0.98 Å (methine) with Uiso(H)=1.2Ueq(C). The positional parameters of the H atom (O1) was refined freely. And in the last stage of the refinement, it was restrained with the H1—O1 = 0.82 (2)Å), with Uiso(H)=1.5Ueq(O).

Figures

Fig. 1.

Fig. 1.

A view of the asymmetric unit with the atomic numbering scheme. The displacement ellipsoids were drawn at the 30% probability level.

Crystal data

C21H20ClNO2 F(000) = 744
Mr = 353.83 Dx = 1.352 Mg m3
Monoclinic, Cc Mo Kα radiation, λ = 0.71073 Å
Hall symbol: C -2yc Cell parameters from 3951 reflections
a = 14.1896 (18) Å θ = 3.7–27.5°
b = 15.881 (2) Å µ = 0.23 mm1
c = 10.3998 (10) Å T = 298 K
β = 132.13 (2)° Block, colourless
V = 1738.0 (7) Å3 0.40 × 0.30 × 0.20 mm
Z = 4

Data collection

Rigaku Mercury2 diffractometer 3127 independent reflections
Radiation source: fine-focus sealed tube 2050 reflections with I > 2σ(I)
graphite Rint = 0.105
Detector resolution: 13.6612 pixels mm-1 θmax = 25.2°, θmin = 3.7°
CCD profile fitting scans h = −16→16
Absorption correction: multi-scan (CrystalClear; Rigaku, 2005) k = −18→18
Tmin = 0.89, Tmax = 1.00 l = −12→12
7216 measured reflections

Refinement

Refinement on F2 Secondary atom site location: difference Fourier map
Least-squares matrix: full Hydrogen site location: inferred from neighbouring sites
R[F2 > 2σ(F2)] = 0.085 H-atom parameters constrained
wR(F2) = 0.240 w = 1/[σ2(Fo2) + (0.116P)2 + 0.730P] where P = (Fo2 + 2Fc2)/3
S = 0.99 (Δ/σ)max < 0.001
3127 reflections Δρmax = 0.33 e Å3
226 parameters Δρmin = −0.29 e Å3
2 restraints Absolute structure: Flack (1983), 1551 Friedel pairs
Primary atom site location: structure-invariant direct methods Flack parameter: 0.07 (16)

Special details

Geometry. All esds (except the esd in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell esds are taken into account individually in the estimation of esds in distances, angles and torsion angles; correlations between esds in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell esds is used for estimating esds involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > 2sigma(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.

Fractional atomic coordinates and isotropic or equivalent isotropic displacement parameters (Å2)

x y z Uiso*/Ueq
Cl1 0.84978 (14) 0.53891 (11) 0.59226 (19) 0.0747 (5)
N1 0.4387 (4) 0.6957 (3) −0.0609 (6) 0.0481 (11)
C4 0.2270 (5) 0.5435 (4) 0.0113 (7) 0.0554 (15)
H4A 0.2462 0.5206 −0.0511 0.066*
C2 0.3791 (4) 0.6606 (3) 0.1069 (6) 0.0433 (13)
C3 0.2871 (4) 0.6169 (4) 0.1035 (7) 0.0458 (12)
O1 0.5267 (4) 0.7746 (2) 0.2256 (5) 0.0681 (12)
H1A 0.5381 0.7522 0.1660 0.102*
C10 0.4042 (6) 0.7604 (4) 0.3021 (8) 0.0615 (17)
H10A 0.4455 0.8085 0.3690 0.074*
C11 0.4105 (4) 0.6255 (4) 0.0053 (6) 0.0441 (13)
H11A 0.3346 0.5962 −0.0957 0.053*
C18 0.7153 (5) 0.5175 (4) 0.3731 (7) 0.0506 (13)
C1 0.4344 (5) 0.7309 (4) 0.2081 (7) 0.0530 (15)
C17 0.6232 (4) 0.5757 (4) 0.2811 (7) 0.0496 (14)
H17A 0.6314 0.6259 0.3337 0.060*
O2 0.3993 (4) 0.7915 (3) −0.3232 (6) 0.0786 (13)
C16 0.5163 (5) 0.5618 (4) 0.1089 (6) 0.0474 (13)
C21 0.5104 (5) 0.4884 (3) 0.0364 (8) 0.0536 (15)
H21A 0.4409 0.4773 −0.0798 0.064*
C6 0.1102 (6) 0.5319 (5) 0.0997 (8) 0.071 (2)
H6A 0.0540 0.5025 0.1006 0.085*
C15 0.3269 (5) 0.7510 (4) −0.1813 (8) 0.0530 (14)
H15A 0.2571 0.7192 −0.2820 0.064*
H15B 0.2997 0.7736 −0.1241 0.064*
C12 0.4812 (5) 0.6659 (4) −0.1490 (7) 0.0529 (14)
H12A 0.5596 0.6343 −0.0681 0.063*
H12B 0.4175 0.6288 −0.2439 0.063*
C8 0.2555 (5) 0.6503 (4) 0.1990 (7) 0.0578 (16)
C19 0.7135 (6) 0.4438 (4) 0.3062 (8) 0.0629 (16)
H19A 0.7796 0.4051 0.3719 0.075*
C20 0.6086 (7) 0.4297 (4) 0.1365 (9) 0.0699 (17)
H20A 0.6023 0.3794 0.0856 0.084*
C9 0.3224 (6) 0.7255 (4) 0.3030 (8) 0.0646 (16)
H9A 0.3065 0.7482 0.3693 0.077*
C7 0.1665 (6) 0.6075 (6) 0.1928 (9) 0.080 (2)
H7A 0.1439 0.6296 0.2518 0.096*
C14 0.3634 (7) 0.8196 (5) −0.2346 (9) 0.083 (2)
H14A 0.2923 0.8581 −0.3084 0.099*
H14B 0.4334 0.8506 −0.1325 0.099*
C13 0.5017 (6) 0.7377 (5) −0.2158 (9) 0.074 (2)
H13A 0.5733 0.7699 −0.1181 0.089*
H13B 0.5247 0.7165 −0.2790 0.089*
C5 0.1409 (6) 0.5033 (5) 0.0082 (8) 0.0641 (17)
H5A 0.1017 0.4548 −0.0583 0.077*

Atomic displacement parameters (Å2)

U11 U22 U33 U12 U13 U23
Cl1 0.0583 (8) 0.0818 (10) 0.0641 (8) 0.0128 (8) 0.0329 (7) −0.0010 (8)
N1 0.0500 (19) 0.057 (3) 0.050 (2) −0.0125 (19) 0.0387 (17) −0.007 (2)
C4 0.046 (2) 0.075 (4) 0.051 (3) −0.003 (3) 0.035 (2) 0.002 (3)
C2 0.040 (2) 0.053 (3) 0.035 (2) 0.005 (2) 0.025 (2) 0.008 (2)
C3 0.045 (2) 0.056 (3) 0.043 (2) 0.011 (2) 0.033 (2) 0.012 (2)
O1 0.066 (2) 0.058 (2) 0.070 (2) −0.005 (2) 0.042 (2) −0.010 (2)
C10 0.073 (3) 0.047 (3) 0.056 (3) 0.013 (3) 0.040 (3) −0.008 (3)
C11 0.035 (2) 0.055 (3) 0.041 (2) 0.002 (2) 0.0247 (19) 0.001 (2)
C18 0.058 (3) 0.047 (3) 0.066 (3) 0.008 (2) 0.050 (2) 0.000 (2)
C1 0.048 (3) 0.052 (3) 0.051 (3) −0.003 (3) 0.030 (2) −0.013 (3)
C17 0.042 (2) 0.066 (4) 0.053 (3) 0.005 (2) 0.036 (2) 0.008 (3)
O2 0.105 (3) 0.081 (3) 0.077 (2) 0.036 (2) 0.072 (2) 0.033 (2)
C16 0.052 (2) 0.053 (3) 0.050 (3) −0.016 (2) 0.039 (2) −0.009 (2)
C21 0.064 (3) 0.044 (3) 0.058 (3) −0.005 (3) 0.043 (3) −0.013 (3)
C6 0.061 (3) 0.090 (5) 0.074 (4) 0.009 (3) 0.050 (3) 0.026 (4)
C15 0.046 (3) 0.052 (3) 0.055 (3) 0.010 (2) 0.031 (2) 0.009 (3)
C12 0.059 (3) 0.062 (3) 0.052 (3) 0.000 (3) 0.043 (2) 0.000 (3)
C8 0.064 (3) 0.077 (4) 0.049 (3) 0.018 (3) 0.045 (2) 0.024 (3)
C19 0.085 (3) 0.043 (3) 0.075 (3) −0.001 (3) 0.059 (3) −0.007 (3)
C20 0.108 (4) 0.040 (3) 0.096 (4) −0.002 (3) 0.083 (3) −0.004 (3)
C9 0.094 (3) 0.057 (4) 0.062 (3) 0.024 (3) 0.060 (3) 0.006 (3)
C7 0.083 (3) 0.122 (6) 0.078 (3) 0.031 (4) 0.071 (3) 0.037 (4)
C14 0.095 (4) 0.097 (5) 0.090 (4) 0.033 (4) 0.075 (3) 0.045 (4)
C13 0.084 (3) 0.096 (5) 0.077 (4) −0.004 (4) 0.068 (3) −0.001 (4)
C5 0.061 (3) 0.074 (4) 0.070 (4) −0.003 (3) 0.050 (3) 0.007 (3)

Geometric parameters (Å, °)

Cl1—C18 1.765 (6) C16—C21 1.360 (8)
N1—C12 1.472 (7) C21—C20 1.395 (9)
N1—C15 1.480 (7) C21—H21A 0.9300
N1—C11 1.499 (7) C6—C5 1.362 (10)
C4—C5 1.359 (9) C6—C7 1.407 (11)
C4—C3 1.382 (8) C6—H6A 0.9300
C4—H4A 0.9300 C15—C14 1.465 (10)
C2—C1 1.364 (7) C15—H15A 0.9700
C2—C3 1.459 (7) C15—H15B 0.9700
C2—C11 1.502 (8) C12—C13 1.462 (10)
C3—C8 1.437 (8) C12—H12A 0.9700
O1—C1 1.381 (7) C12—H12B 0.9700
O1—H1A 0.8200 C8—C7 1.396 (9)
C10—C9 1.290 (9) C8—C9 1.457 (9)
C10—C1 1.387 (9) C19—C20 1.362 (9)
C10—H10A 0.9300 C19—H19A 0.9300
C11—C16 1.506 (7) C20—H20A 0.9300
C11—H11A 0.9800 C9—H9A 0.9300
C18—C17 1.342 (7) C7—H7A 0.9300
C18—C19 1.353 (8) C14—H14A 0.9700
C17—C16 1.383 (7) C14—H14B 0.9700
C17—H17A 0.9300 C13—H13A 0.9700
O2—C13 1.383 (8) C13—H13B 0.9700
O2—C14 1.393 (9) C5—H5A 0.9300
C12—N1—C15 108.6 (5) C14—C15—H15A 110.1
C12—N1—C11 113.2 (4) N1—C15—H15A 110.1
C15—N1—C11 111.4 (4) C14—C15—H15B 110.1
C5—C4—C3 122.7 (7) N1—C15—H15B 110.1
C5—C4—H4A 118.7 H15A—C15—H15B 108.4
C3—C4—H4A 118.7 C13—C12—N1 109.9 (5)
C1—C2—C3 116.8 (5) C13—C12—H12A 109.7
C1—C2—C11 124.0 (5) N1—C12—H12A 109.7
C3—C2—C11 119.2 (5) C13—C12—H12B 109.7
C4—C3—C8 117.2 (5) N1—C12—H12B 109.7
C4—C3—C2 123.0 (5) H12A—C12—H12B 108.2
C8—C3—C2 119.8 (5) C7—C8—C3 118.7 (6)
C1—O1—H1A 109.5 C7—C8—C9 123.5 (6)
C9—C10—C1 124.4 (6) C3—C8—C9 117.7 (5)
C9—C10—H10A 117.8 C18—C19—C20 115.8 (6)
C1—C10—H10A 117.8 C18—C19—H19A 122.1
N1—C11—C2 110.0 (4) C20—C19—H19A 122.1
N1—C11—C16 112.5 (4) C19—C20—C21 122.3 (6)
C2—C11—C16 111.7 (4) C19—C20—H20A 118.9
N1—C11—H11A 107.4 C21—C20—H20A 118.9
C2—C11—H11A 107.4 C10—C9—C8 119.2 (6)
C16—C11—H11A 107.4 C10—C9—H9A 120.4
C17—C18—C19 123.7 (6) C8—C9—H9A 120.4
C17—C18—Cl1 118.7 (5) C8—C7—C6 121.7 (7)
C19—C18—Cl1 117.5 (4) C8—C7—H7A 119.2
C2—C1—O1 121.1 (6) C6—C7—H7A 119.2
C2—C1—C10 122.0 (6) O2—C14—C15 113.0 (7)
O1—C1—C10 116.8 (5) O2—C14—H14A 109.0
C18—C17—C16 120.8 (6) C15—C14—H14A 109.0
C18—C17—H17A 119.6 O2—C14—H14B 109.0
C16—C17—H17A 119.6 C15—C14—H14B 109.0
C13—O2—C14 108.4 (5) H14A—C14—H14B 107.8
C21—C16—C17 117.4 (5) O2—C13—C12 115.5 (5)
C21—C16—C11 121.2 (5) O2—C13—H13A 108.4
C17—C16—C11 121.4 (5) C12—C13—H13A 108.4
C16—C21—C20 119.9 (5) O2—C13—H13B 108.4
C16—C21—H21A 120.0 C12—C13—H13B 108.4
C20—C21—H21A 120.0 H13A—C13—H13B 107.5
C5—C6—C7 117.7 (6) C4—C5—C6 122.0 (7)
C5—C6—H6A 121.1 C4—C5—H5A 119.0
C7—C6—H6A 121.1 C6—C5—H5A 119.0
C14—C15—N1 108.2 (5)

Hydrogen-bond geometry (Å, °)

Cg is the centroid of the C3–C8 benzene ring.
D—H···A D—H H···A D···A D—H···A
O1—H1A···N1 0.82 1.97 2.649 (6) 139
C21—H21A···Cgi 0.93 2.87 3.770 (7) 164

Symmetry codes: (i) x, −y+1, z−1/2.

Footnotes

Supplementary data and figures for this paper are available from the IUCr electronic archives (Reference: XU5238).

References

  1. Devi, I. & Bhuyan, P. J. (2004). Tetrahedron Lett. 45, 8625–8627.
  2. Domling, A. & Ugi, I. (2000). Angew. Chem. Int. Ed. 39, 3168–3210. [DOI] [PubMed]
  3. Flack, H. D. (1983). Acta Cryst. A39, 876–881.
  4. Fu, D.-W., Ge, J.-Z., Dai, J., Ye, H.-Y. & Qu, Z.-R. (2009). Inorg. Chem. Commun. 12, 994-997.
  5. Hulme, C. & Gore, V. (2003). Curr. Med. Chem. 10, 51–8. [DOI] [PubMed]
  6. Rigaku (2005). CrystalClear Rigaku Corporation, Tokyo, Japan.
  7. Sheldrick, G. M. (2008). Acta Cryst. A64, 112–122. [DOI] [PubMed]
  8. Ugi, I. (1962). Angew. Chem. Int. Ed. Engl. 1, 8–21.

Associated Data

This section collects any data citations, data availability statements, or supplementary materials included in this article.

Supplementary Materials

Crystal structure: contains datablock(s) I, global. DOI: 10.1107/S1600536811021726/xu5238sup1.cif

e-67-o1681-sup1.cif (17.6KB, cif)

Structure factors: contains datablock(s) I. DOI: 10.1107/S1600536811021726/xu5238Isup2.hkl

e-67-o1681-Isup2.hkl (153.4KB, hkl)

Additional supplementary materials: crystallographic information; 3D view; checkCIF report


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