Abstract
The title butterfly-shaped molecule, C11H6N2O2, is folded slightly along the O=C⋯C=O line, the dihedral angle between the two parts being 6.42 (3)°. In the crystal, adjacent molecules are linked through C—H⋯O hydrogen bonds into infinite layers parallel to the ac plane. The layers are further connected into a three-dimensional netweork via π–π interactions formed between pairs of antiparallel arranged molecules, with a centroid–centroid distance between the central six-membered ring and the benzene ring of 3.4349 (9) Å.
Related literature
For the structure of isoquinolinedione-pyrrole fused system in 1,3-dinitropyrrolo[1,2-b]isoquinoline-5,10-dione, see: Du & Hitchcock (1992 ▶).
Experimental
Crystal data
C11H6N2O2
M r = 198.18
Monoclinic,
a = 7.6518 (7) Å
b = 7.2469 (6) Å
c = 15.5197 (13) Å
β = 99.947 (1)°
V = 847.66 (13) Å3
Z = 4
Mo Kα radiation
μ = 0.11 mm−1
T = 100 K
0.21 × 0.17 × 0.09 mm
Data collection
Bruker APEXII CCD diffractometer
Absorption correction: multi-scan (SADABS; Sheldrick, 1996 ▶) T min = 0.977, T max = 0.990
4894 measured reflections
1925 independent reflections
1583 reflections with I > 2σ(I)
R int = 0.021
Refinement
R[F 2 > 2σ(F 2)] = 0.040
wR(F 2) = 0.107
S = 1.04
1925 reflections
136 parameters
H-atom parameters constrained
Δρmax = 0.29 e Å−3
Δρmin = −0.22 e Å−3
Data collection: APEX2 (Bruker, 2007 ▶); cell refinement: SAINT (Bruker, 2007 ▶); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: X-SEED (Barbour, 2001 ▶); software used to prepare material for publication: SHELXL97 and publCIF (Westrip, 2010 ▶).
Supplementary Material
Crystal structure: contains datablock(s) I, New_Global_Publ_Block. DOI: 10.1107/S1600536811022082/gk2380sup1.cif
Structure factors: contains datablock(s) I. DOI: 10.1107/S1600536811022082/gk2380Isup2.hkl
Additional supplementary materials: crystallographic information; 3D view; checkCIF report
Table 1. Hydrogen-bond geometry (Å, °).
| D—H⋯A | D—H | H⋯A | D⋯A | D—H⋯A |
|---|---|---|---|---|
| C2—H2⋯O1i | 0.95 | 2.46 | 3.2828 (17) | 146 |
| C6—H6⋯O1ii | 0.95 | 2.57 | 3.5190 (19) | 179 |
| C8—H8⋯O2iii | 0.95 | 2.55 | 3.2233 (17) | 128 |
Symmetry codes: (i)
; (ii)
; (iii)
.
Acknowledgments
The authors thank the University of Malaya for funding this study (FRGS grant No. FP001/2010 A).
supplementary crystallographic information
Comment
This work reports the first crystal structure of an isoquinolinedione-fused imidazole. The structure of an isoquinolinedione-pyrrole fused system has been reported previously (Du & Hitchcock, 1992). The present molecule (Fig. 1) is almost planar (r.m.s deviation = 0.0718 Å) but slighly bent along the O=C···.C=O line with the corresponding dihedral angle of 6.42 (3)°. In the crystal, intermolecular C—H···O interactions (Table 1) connect the molecules into a two-dimensional array in the ac plane (Fig. 2). The isoquinoline rings of pairs of the molecule related by symmetry –x + 1, -y + 1, -z, are placed above each other in an anti-parallel manner with the centriods of the six-membered heterocyclic ring and the benzene ring at a distance of 3.4349 (9) Å.
Experimental
A solution of phthaloyl chloride (5.58 g, 27.5 mmol) in dry pyridine (20 ml) was added dropwise to a mixture of imidazole (1.7 g, 25 mmol) and bis (triphenylphosphine)palladium (II) chloride (0.87 g) in dry pyridine (15 ml) at 273 K. The mixture was refluxed for 4 h, then cooled to room temperature and poured into ice water (150 ml). The aqueous solution was extracted with chloroform and the chloroform solution was washed with 2 % aqueous HCl solution and distilled water (3 x15 ml). It was dried over magnesium sulfate and evaporated under vacuum. The amorphous residue was re-crystallized from acetonitrile to give yellow crystals of the title compound (m.p. = 232-234° C).
Refinement
Hydrogen atoms were placed at calculated positions and refined as riding atoms with C—H distance of 0.95 Å and with Uiso(H) set to 1.2 Ueq(C).
Figures
Fig. 1.
The molecular structure of the title compound showing displacement ellipsoids at the 50% probability level. Hydrogen atoms are drawn as spheres of arbitrary radius.
Fig. 2.
The 2D-network formed by C—H···O hydrogen bonds.
Crystal data
| C11H6N2O2 | F(000) = 408 |
| Mr = 198.18 | Dx = 1.553 Mg m−3 |
| Monoclinic, P21/c | Mo Kα radiation, λ = 0.71073 Å |
| Hall symbol: -P 2ybc | Cell parameters from 1521 reflections |
| a = 7.6518 (7) Å | θ = 2.7–29.5° |
| b = 7.2469 (6) Å | µ = 0.11 mm−1 |
| c = 15.5197 (13) Å | T = 100 K |
| β = 99.947 (1)° | Block, yellow |
| V = 847.66 (13) Å3 | 0.21 × 0.17 × 0.09 mm |
| Z = 4 |
Data collection
| Bruker APEXII CCD diffractometer | 1925 independent reflections |
| Radiation source: fine-focus sealed tube | 1583 reflections with I > 2σ(I) |
| graphite | Rint = 0.021 |
| φ and ω scans | θmax = 27.5°, θmin = 2.7° |
| Absorption correction: multi-scan (SADABS; Sheldrick, 1996) | h = −9→9 |
| Tmin = 0.977, Tmax = 0.990 | k = −9→8 |
| 4894 measured reflections | l = −20→19 |
Refinement
| Refinement on F2 | Primary atom site location: structure-invariant direct methods |
| Least-squares matrix: full | Secondary atom site location: difference Fourier map |
| R[F2 > 2σ(F2)] = 0.040 | Hydrogen site location: inferred from neighbouring sites |
| wR(F2) = 0.107 | H-atom parameters constrained |
| S = 1.04 | w = 1/[σ2(Fo2) + (0.0535P)2 + 0.3219P] where P = (Fo2 + 2Fc2)/3 |
| 1925 reflections | (Δ/σ)max < 0.001 |
| 136 parameters | Δρmax = 0.29 e Å−3 |
| 0 restraints | Δρmin = −0.22 e Å−3 |
Special details
| Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
| Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger. |
Fractional atomic coordinates and isotropic or equivalent isotropic displacement parameters (Å2)
| x | y | z | Uiso*/Ueq | ||
| O1 | 0.26338 (13) | 0.48928 (15) | 0.19588 (7) | 0.0219 (3) | |
| O2 | 0.82600 (13) | 0.21685 (15) | 0.07219 (7) | 0.0224 (3) | |
| N1 | 0.62688 (16) | 0.52159 (17) | 0.28827 (8) | 0.0186 (3) | |
| N2 | 0.70971 (15) | 0.36883 (16) | 0.17748 (7) | 0.0152 (3) | |
| C1 | 0.80899 (19) | 0.5005 (2) | 0.30252 (10) | 0.0202 (3) | |
| H1 | 0.8866 | 0.5453 | 0.3526 | 0.024* | |
| C2 | 0.86301 (19) | 0.4074 (2) | 0.23580 (9) | 0.0197 (3) | |
| H2 | 0.9811 | 0.3757 | 0.2304 | 0.024* | |
| C3 | 0.69589 (18) | 0.28089 (19) | 0.09539 (9) | 0.0160 (3) | |
| C4 | 0.51463 (18) | 0.27899 (19) | 0.04292 (9) | 0.0154 (3) | |
| C5 | 0.4917 (2) | 0.20479 (19) | −0.04108 (9) | 0.0190 (3) | |
| H5 | 0.5907 | 0.1567 | −0.0632 | 0.023* | |
| C6 | 0.3242 (2) | 0.2012 (2) | −0.09248 (10) | 0.0222 (3) | |
| H6 | 0.3089 | 0.1516 | −0.1500 | 0.027* | |
| C7 | 0.1790 (2) | 0.2701 (2) | −0.06005 (9) | 0.0217 (3) | |
| H7 | 0.0644 | 0.2665 | −0.0953 | 0.026* | |
| C8 | 0.20076 (18) | 0.3441 (2) | 0.02357 (9) | 0.0186 (3) | |
| H8 | 0.1011 | 0.3913 | 0.0454 | 0.022* | |
| C9 | 0.36831 (18) | 0.34932 (19) | 0.07565 (9) | 0.0150 (3) | |
| C10 | 0.38834 (18) | 0.43063 (19) | 0.16455 (9) | 0.0155 (3) | |
| C11 | 0.57142 (18) | 0.44126 (19) | 0.21262 (9) | 0.0151 (3) |
Atomic displacement parameters (Å2)
| U11 | U22 | U33 | U12 | U13 | U23 | |
| O1 | 0.0171 (5) | 0.0277 (6) | 0.0215 (5) | 0.0024 (4) | 0.0055 (4) | −0.0027 (4) |
| O2 | 0.0182 (5) | 0.0241 (6) | 0.0262 (6) | 0.0027 (4) | 0.0073 (4) | −0.0027 (5) |
| N1 | 0.0194 (6) | 0.0195 (6) | 0.0161 (6) | −0.0011 (5) | 0.0012 (5) | −0.0007 (5) |
| N2 | 0.0137 (6) | 0.0157 (6) | 0.0160 (6) | −0.0003 (4) | 0.0022 (4) | 0.0007 (5) |
| C1 | 0.0191 (7) | 0.0209 (7) | 0.0189 (7) | −0.0032 (6) | −0.0013 (5) | −0.0004 (6) |
| C2 | 0.0145 (7) | 0.0201 (7) | 0.0229 (7) | −0.0012 (6) | −0.0006 (5) | 0.0029 (6) |
| C3 | 0.0179 (7) | 0.0131 (6) | 0.0175 (7) | −0.0002 (5) | 0.0044 (5) | 0.0017 (5) |
| C4 | 0.0185 (7) | 0.0120 (6) | 0.0156 (7) | −0.0010 (5) | 0.0027 (5) | 0.0027 (5) |
| C5 | 0.0265 (8) | 0.0150 (7) | 0.0165 (7) | −0.0012 (6) | 0.0064 (6) | 0.0012 (6) |
| C6 | 0.0343 (9) | 0.0166 (7) | 0.0147 (7) | −0.0056 (6) | 0.0015 (6) | 0.0003 (5) |
| C7 | 0.0226 (7) | 0.0215 (8) | 0.0186 (7) | −0.0052 (6) | −0.0037 (6) | 0.0032 (6) |
| C8 | 0.0163 (7) | 0.0195 (7) | 0.0194 (7) | −0.0017 (6) | 0.0017 (5) | 0.0029 (6) |
| C9 | 0.0169 (7) | 0.0134 (7) | 0.0146 (7) | −0.0018 (5) | 0.0024 (5) | 0.0032 (5) |
| C10 | 0.0159 (7) | 0.0146 (7) | 0.0163 (7) | −0.0007 (5) | 0.0038 (5) | 0.0021 (5) |
| C11 | 0.0155 (7) | 0.0143 (7) | 0.0160 (7) | 0.0003 (5) | 0.0043 (5) | 0.0019 (5) |
Geometric parameters (Å, °)
| O1—C10 | 1.2215 (16) | C4—C9 | 1.4027 (19) |
| O2—C3 | 1.2084 (17) | C5—C6 | 1.388 (2) |
| N1—C11 | 1.3135 (18) | C5—H5 | 0.9500 |
| N1—C1 | 1.3812 (19) | C6—C7 | 1.390 (2) |
| N2—C11 | 1.3754 (17) | C6—H6 | 0.9500 |
| N2—C2 | 1.3808 (18) | C7—C8 | 1.387 (2) |
| N2—C3 | 1.4121 (18) | C7—H7 | 0.9500 |
| C1—C2 | 1.359 (2) | C8—C9 | 1.3930 (19) |
| C1—H1 | 0.9500 | C8—H8 | 0.9500 |
| C2—H2 | 0.9500 | C9—C10 | 1.4836 (19) |
| C3—C4 | 1.4821 (19) | C10—C11 | 1.4710 (18) |
| C4—C5 | 1.3930 (19) | ||
| C11—N1—C1 | 104.80 (12) | C5—C6—C7 | 120.15 (14) |
| C11—N2—C2 | 106.70 (12) | C5—C6—H6 | 119.9 |
| C11—N2—C3 | 125.95 (12) | C7—C6—H6 | 119.9 |
| C2—N2—C3 | 127.27 (12) | C8—C7—C6 | 120.21 (14) |
| C2—C1—N1 | 111.36 (13) | C8—C7—H7 | 119.9 |
| C2—C1—H1 | 124.3 | C6—C7—H7 | 119.9 |
| N1—C1—H1 | 124.3 | C7—C8—C9 | 120.21 (13) |
| C1—C2—N2 | 105.33 (13) | C7—C8—H8 | 119.9 |
| C1—C2—H2 | 127.3 | C9—C8—H8 | 119.9 |
| N2—C2—H2 | 127.3 | C8—C9—C4 | 119.48 (13) |
| O2—C3—N2 | 120.33 (13) | C8—C9—C10 | 119.16 (12) |
| O2—C3—C4 | 125.01 (13) | C4—C9—C10 | 121.35 (12) |
| N2—C3—C4 | 114.65 (12) | O1—C10—C11 | 121.49 (13) |
| C5—C4—C9 | 120.00 (13) | O1—C10—C9 | 123.10 (13) |
| C5—C4—C3 | 118.17 (12) | C11—C10—C9 | 115.39 (12) |
| C9—C4—C3 | 121.83 (12) | N1—C11—N2 | 111.81 (12) |
| C6—C5—C4 | 119.95 (13) | N1—C11—C10 | 127.51 (12) |
| C6—C5—H5 | 120.0 | N2—C11—C10 | 120.63 (12) |
| C4—C5—H5 | 120.0 |
Hydrogen-bond geometry (Å, °)
| D—H···A | D—H | H···A | D···A | D—H···A |
| C2—H2···O1i | 0.95 | 2.46 | 3.2828 (17) | 146 |
| C6—H6···O1ii | 0.95 | 2.57 | 3.5190 (19) | 179 |
| C8—H8···O2iii | 0.95 | 2.55 | 3.2233 (17) | 128 |
Symmetry codes: (i) x+1, y, z; (ii) x, −y+1/2, z−1/2; (iii) x−1, y, z.
Footnotes
Supplementary data and figures for this paper are available from the IUCr electronic archives (Reference: GK2380).
References
- Barbour, L. J. (2001). J. Supramol. Chem, 1, 189–191.
- Bruker (2007). APEX2 and SAINT Bruker AXS Inc., Madison, Wisconsin, USA.
- Du, M.-H. & Hitchcock, P. B. (1992). Acta Cryst. C48, 2058–2060.
- Sheldrick, G. M. (1996). SADABS University of Göttingen, Germany.
- Sheldrick, G. M. (2008). Acta Cryst. A64, 112–122. [DOI] [PubMed]
- Westrip, S. P. (2010). J. Appl. Cryst. 43, 920–925.
Associated Data
This section collects any data citations, data availability statements, or supplementary materials included in this article.
Supplementary Materials
Crystal structure: contains datablock(s) I, New_Global_Publ_Block. DOI: 10.1107/S1600536811022082/gk2380sup1.cif
Structure factors: contains datablock(s) I. DOI: 10.1107/S1600536811022082/gk2380Isup2.hkl
Additional supplementary materials: crystallographic information; 3D view; checkCIF report


