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Acta Crystallographica Section E: Structure Reports Online logoLink to Acta Crystallographica Section E: Structure Reports Online
. 2011 Jun 18;67(Pt 7):o1672. doi: 10.1107/S160053681102188X

5′-Methyl-4′-oxo-7′-phenyl-3′,4′-dihydro-1′H-spiro­[cyclo­hexane-1,2′-quinazoline]-8′-carbonitrile

Jianhong Tang a,b, Daxin Shi a, Liupan Yan a, Xuan Liu a, Jiarong Li a,*
PMCID: PMC3152013  PMID: 21837071

Abstract

The title compound, C21H21N3O, was obtained by cyclo­condensation of 3-amino-5-methyl-[1,1′-biphen­yl]-2,4-di­car­bo­nitrile with cyclo­hexa­none. The six-membered 1,3-diaza ring assumes an envelope conformation [with the flap atom displaced by 0.511 (7) Å from the plane through the other ring atoms] and the cyclo­hexane ring displays a chair conformation. The dihedral angle between the aromatic rings is 42.61 (7)°.In the crystal, the mol­ecules form hydrogen-bonded bands along [011].

Related literature

For the medicinal and biological properities of dihydro­quinazolin-4(3H)-one derivatives, see: Deng et al. (2000); Chenard et al. (2000); Bertrand et al. (2001); Welch et al. (2001). For a related structure, see Zhang et al. (2008)graphic file with name e-67-o1672-scheme1.jpg

Experimental

Crystal data

  • C21H21N3O

  • M r = 331.41

  • Triclinic, Inline graphic

  • a = 7.1824 (15) Å

  • b = 11.233 (3) Å

  • c = 11.430 (3) Å

  • α = 101.858 (8)°

  • β = 93.794 (9)°

  • γ = 104.606 (9)°

  • V = 866.6 (4) Å3

  • Z = 2

  • Mo Kα radiation

  • μ = 0.08 mm−1

  • T = 153 K

  • 0.35 × 0.27 × 0.27 mm

Data collection

  • Rigaku AFC10/Saturn724+ diffractometer

  • 9387 measured reflections

  • 4521 independent reflections

  • 3511 reflections with I > 2σ(I)

  • R int = 0.024

Refinement

  • R[F 2 > 2σ(F 2)] = 0.048

  • wR(F 2) = 0.117

  • S = 1.00

  • 4521 reflections

  • 235 parameters

  • H atoms treated by a mixture of independent and constrained refinement

  • Δρmax = 0.35 e Å−3

  • Δρmin = −0.20 e Å−3

Data collection: CrystalClear (Rigaku, 2004); cell refinement: CrystalClear; data reduction: CrystalClear; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: SHELXTL (Sheldrick, 2008); software used to prepare material for publication: SHELXL97.

Supplementary Material

Crystal structure: contains datablock(s) I, global. DOI: 10.1107/S160053681102188X/ld2014sup1.cif

e-67-o1672-sup1.cif (21.1KB, cif)

Structure factors: contains datablock(s) I. DOI: 10.1107/S160053681102188X/ld2014Isup2.hkl

e-67-o1672-Isup2.hkl (221.5KB, hkl)

Supplementary material file. DOI: 10.1107/S160053681102188X/ld2014Isup3.cml

Additional supplementary materials: crystallographic information; 3D view; checkCIF report

Table 1. Hydrogen-bond geometry (Å, °).

D—H⋯A D—H H⋯A DA D—H⋯A
N2—H2N⋯Oli 0.920 (17) 1.998 (14) 2.9010 (17) 171.68 (14)
N1—H1N⋯N3ii 0.875 (18) 2.281 (14) 3.1188 (19) 160.24 (15)

Symmetry codes: (i) Inline graphic; (ii) Inline graphic.

Acknowledgments

The authors thank Beijing Institute of Technology for the X-ray diffraction analysis.

supplementary crystallographic information

Comment

The molecular structure of (I) is represented on Fig. 1. The 1,3-diaza ring exists in an envelope conformation with its C6 atom displaced by 0.511 (7)Å from the rest of the atoms of the ring (planar within 0.025 (1) Å). The geometry of the fused rings compares well with the related spiro[cyclopentane-1,2'(1'H)-quinazolin]-4'(3')-one] (Zhang et al., 2008). The crystal packing is stabilized by intermolecular N—H···O and N—H···N hydrogen bonds forming alternating 8- and 12-membered centrosymmetric rings along [0 1 1] direction.

Experimental

3-Amino-5-methyl-biphenyl-2,4-dicarbonitrile (0.1 mmol) was added to a mixture of cyclohexanone (3 ml) and sodium hydroxide (0.03 mmol). The reagents were heated at 373 K for 1.5 h. The reaction mixture was cooled to room temperature with water (15 ml) and then filtered to give the title compound. The product was recrystallizated from a mixed solvent (ethanol:petroleum ether 1:3) to give pale-yellow crystals.

M.p. 572–573 K. Spectra data: IR (KBr): 3329, 3067, 2934, 2221,1660, 1560, 1403, 697 cm-1; 1H-NMR(DMSO, p.p.m.):1.34–1.85 (10H, m, C5H10), 2.64 (3H, d, J = 1.4 Hz, CH3), 6.42(1H, s, NH), 6.71 (1H, s, ArH), 7.49–7.53 (5H, m, ArH), 8.26 (1H, s, NH); ESI-MS m/z: [M+H]+ 332.1; C21H21N3O:calcd. C 76.11, H 6.39, N 12.68; found C 76.12, H 6.55, N 12.06.

Refinement

C—H bonds were refined within a riding/rotating model approximation with C—H distances 0.95–0.99 Å, and with Uiso(H)=1.2Ueq(C) or 1.5Ueq(C)(methyl). H atoms of NH group were located in difference Fourrier syntheses and refined freely.

Figures

Fig. 1.

Fig. 1.

The molecular structure of (I) drawn with 50% probability ellipsoids

Fig. 2.

Fig. 2.

The crystal structure of (I) viewed along x axis

Crystal data

C21H21N3O Z = 2
Mr = 331.41 F(000) = 352
Triclinic, P1 Dx = 1.270 Mg m3
Hall symbol: -P 1 Mo Kα radiation, λ = 0.71073 Å
a = 7.1824 (15) Å Cell parameters from 3260 reflections
b = 11.233 (3) Å θ = 3.0–29.1°
c = 11.430 (3) Å µ = 0.08 mm1
α = 101.858 (8)° T = 153 K
β = 93.794 (9)° Block, colorless
γ = 104.606 (9)° 0.35 × 0.27 × 0.27 mm
V = 866.6 (4) Å3

Data collection

Rigaku AFC10/Saturn724+ diffractometer 3511 reflections with I > 2σ(I)
Radiation source: rotating anode Rint = 0.024
graphite θmax = 29.1°, θmin = 3.0°
Detector resolution: 28.5714 pixels mm-1 h = −9→7
phi and ω scans k = −15→15
9387 measured reflections l = −15→15
4521 independent reflections

Refinement

Refinement on F2 Primary atom site location: structure-invariant direct methods
Least-squares matrix: full Secondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.048 Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.117 H atoms treated by a mixture of independent and constrained refinement
S = 1.00 w = 1/[σ2(Fo2) + (0.0516P)2 + 0.259P] where P = (Fo2 + 2Fc2)/3
4521 reflections (Δ/σ)max < 0.001
235 parameters Δρmax = 0.35 e Å3
0 restraints Δρmin = −0.20 e Å3

Special details

Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.

Fractional atomic coordinates and isotropic or equivalent isotropic displacement parameters (Å2)

x y z Uiso*/Ueq
O1 0.79935 (15) 0.44593 (8) 0.06825 (9) 0.0303 (2)
N1 0.97094 (15) 0.77778 (10) 0.30982 (9) 0.0212 (2)
N2 1.00920 (15) 0.63845 (9) 0.13608 (9) 0.0201 (2)
N3 0.84792 (18) 0.93552 (12) 0.57411 (11) 0.0336 (3)
C1 1.26985 (18) 0.83252 (12) 0.22053 (11) 0.0212 (3)
H1A 1.3292 0.7806 0.2637 0.025*
H1B 1.2955 0.9177 0.2742 0.025*
C2 1.36630 (19) 0.84416 (12) 0.10637 (12) 0.0250 (3)
H2A 1.5044 0.8920 0.1293 0.030*
H2B 1.3612 0.7587 0.0593 0.030*
C3 1.2676 (2) 0.91080 (13) 0.02799 (13) 0.0290 (3)
H3A 1.3260 0.9095 −0.0482 0.035*
H3B 1.2883 1.0002 0.0704 0.035*
C4 1.0504 (2) 0.84591 (13) −0.00007 (12) 0.0255 (3)
H4A 1.0296 0.7585 −0.0479 0.031*
H4B 0.9881 0.8920 −0.0488 0.031*
C5 0.95716 (18) 0.84267 (11) 0.11605 (11) 0.0214 (3)
H5A 0.8168 0.7998 0.0958 0.026*
H5B 0.9719 0.9302 0.1617 0.026*
C6 1.05070 (17) 0.77279 (11) 0.19470 (10) 0.0179 (2)
C7 0.78933 (17) 0.70442 (11) 0.31283 (10) 0.0185 (2)
C8 0.68158 (18) 0.73621 (11) 0.40828 (11) 0.0193 (2)
C9 0.49368 (18) 0.66095 (12) 0.41115 (11) 0.0203 (2)
C10 0.41853 (19) 0.55284 (12) 0.31972 (12) 0.0242 (3)
H10 0.2911 0.5021 0.3205 0.029*
C11 0.52333 (19) 0.51594 (12) 0.22663 (12) 0.0234 (3)
C12 0.71034 (18) 0.59166 (11) 0.22332 (10) 0.0190 (2)
C13 0.83918 (18) 0.55304 (11) 0.13493 (11) 0.0203 (2)
C14 0.77055 (18) 0.84636 (12) 0.50192 (11) 0.0224 (3)
C15 0.4289 (2) 0.39423 (14) 0.13529 (14) 0.0364 (4)
H15A 0.4901 0.3288 0.1491 0.044*
H15B 0.4446 0.4074 0.0540 0.044*
H15C 0.2905 0.3674 0.1434 0.044*
C16 0.37353 (18) 0.69620 (13) 0.50673 (11) 0.0228 (3)
C17 0.3629 (2) 0.82022 (14) 0.54351 (12) 0.0281 (3)
H17 0.4364 0.8841 0.5090 0.034*
C18 0.2455 (2) 0.85120 (17) 0.63036 (13) 0.0377 (4)
H18 0.2394 0.9361 0.6553 0.045*
C19 0.1375 (2) 0.75827 (19) 0.68029 (14) 0.0431 (4)
H19 0.0572 0.7793 0.7396 0.052*
C20 0.1462 (2) 0.63526 (18) 0.64427 (14) 0.0413 (4)
H20 0.0718 0.5717 0.6789 0.050*
C21 0.2633 (2) 0.60356 (15) 0.55756 (13) 0.0314 (3)
H21 0.2681 0.5184 0.5329 0.038*
H2N 1.081 (2) 0.6152 (15) 0.0762 (15) 0.034 (4)*
H1N 1.012 (3) 0.8526 (17) 0.3587 (16) 0.039 (5)*

Atomic displacement parameters (Å2)

U11 U22 U33 U12 U13 U23
O1 0.0370 (6) 0.0169 (4) 0.0291 (5) −0.0006 (4) 0.0161 (4) −0.0058 (4)
N1 0.0228 (5) 0.0177 (5) 0.0172 (5) 0.0004 (4) 0.0073 (4) −0.0041 (4)
N2 0.0229 (5) 0.0151 (5) 0.0203 (5) 0.0039 (4) 0.0092 (4) −0.0010 (4)
N3 0.0293 (6) 0.0297 (6) 0.0331 (6) 0.0038 (5) 0.0098 (5) −0.0087 (5)
C1 0.0185 (6) 0.0199 (6) 0.0211 (6) 0.0024 (5) 0.0036 (5) −0.0010 (5)
C2 0.0197 (6) 0.0228 (6) 0.0266 (6) 0.0001 (5) 0.0080 (5) −0.0024 (5)
C3 0.0287 (7) 0.0260 (7) 0.0285 (7) −0.0013 (5) 0.0099 (5) 0.0064 (5)
C4 0.0276 (7) 0.0241 (6) 0.0227 (6) 0.0030 (5) 0.0041 (5) 0.0057 (5)
C5 0.0204 (6) 0.0178 (6) 0.0239 (6) 0.0038 (5) 0.0047 (5) 0.0014 (5)
C6 0.0193 (6) 0.0145 (5) 0.0170 (5) 0.0024 (4) 0.0060 (4) −0.0012 (4)
C7 0.0210 (6) 0.0158 (5) 0.0173 (5) 0.0041 (4) 0.0050 (4) 0.0012 (4)
C8 0.0218 (6) 0.0174 (5) 0.0176 (5) 0.0055 (5) 0.0060 (4) 0.0000 (4)
C9 0.0210 (6) 0.0206 (6) 0.0204 (6) 0.0068 (5) 0.0066 (5) 0.0046 (5)
C10 0.0187 (6) 0.0232 (6) 0.0270 (6) 0.0015 (5) 0.0062 (5) 0.0015 (5)
C11 0.0230 (6) 0.0201 (6) 0.0230 (6) 0.0029 (5) 0.0052 (5) −0.0009 (5)
C12 0.0218 (6) 0.0158 (5) 0.0172 (5) 0.0034 (5) 0.0050 (4) 0.0000 (4)
C13 0.0250 (6) 0.0167 (5) 0.0169 (5) 0.0036 (5) 0.0059 (5) −0.0001 (4)
C14 0.0220 (6) 0.0233 (6) 0.0212 (6) 0.0067 (5) 0.0091 (5) 0.0009 (5)
C15 0.0278 (7) 0.0291 (7) 0.0365 (8) −0.0064 (6) 0.0093 (6) −0.0113 (6)
C16 0.0190 (6) 0.0307 (7) 0.0190 (6) 0.0080 (5) 0.0051 (5) 0.0039 (5)
C17 0.0264 (7) 0.0339 (7) 0.0236 (6) 0.0112 (6) 0.0058 (5) 0.0013 (5)
C18 0.0364 (8) 0.0506 (9) 0.0276 (7) 0.0229 (7) 0.0071 (6) −0.0024 (7)
C19 0.0370 (9) 0.0760 (13) 0.0255 (7) 0.0292 (9) 0.0149 (6) 0.0114 (8)
C20 0.0318 (8) 0.0683 (12) 0.0357 (8) 0.0184 (8) 0.0173 (7) 0.0278 (8)
C21 0.0271 (7) 0.0408 (8) 0.0325 (7) 0.0123 (6) 0.0112 (6) 0.0158 (6)

Geometric parameters (Å, °)

O1—C13 1.2374 (14) C7—C8 1.4169 (15)
N1—C7 1.3628 (16) C8—C9 1.4068 (17)
N1—C6 1.4658 (15) C8—C14 1.4323 (17)
N1—H1N 0.875 (18) C9—C10 1.3898 (17)
N2—C13 1.3468 (16) C9—C16 1.4881 (16)
N2—C6 1.4650 (15) C10—C11 1.3974 (17)
N2—H2N 0.920 (17) C10—H10 0.9500
N3—C14 1.1453 (17) C11—C12 1.4045 (17)
C1—C6 1.5295 (17) C11—C15 1.5071 (18)
C1—C2 1.5310 (17) C12—C13 1.4870 (16)
C1—H1A 0.9900 C15—H15A 0.9800
C1—H1B 0.9900 C15—H15B 0.9800
C2—C3 1.525 (2) C15—H15C 0.9800
C2—H2A 0.9900 C16—C17 1.3931 (19)
C2—H2B 0.9900 C16—C21 1.3933 (19)
C3—C4 1.5268 (19) C17—C18 1.3909 (18)
C3—H3A 0.9900 C17—H17 0.9500
C3—H3B 0.9900 C18—C19 1.383 (3)
C4—C5 1.5288 (17) C18—H18 0.9500
C4—H4A 0.9900 C19—C20 1.377 (3)
C4—H4B 0.9900 C19—H19 0.9500
C5—C6 1.5335 (18) C20—C21 1.3901 (19)
C5—H5A 0.9900 C20—H20 0.9500
C5—H5B 0.9900 C21—H21 0.9500
C7—C12 1.4147 (16)
C7—N1—C6 119.48 (10) C12—C7—C8 119.21 (11)
C7—N1—H1N 119.5 (11) C9—C8—C7 120.81 (11)
C6—N1—H1N 112.5 (11) C9—C8—C14 121.21 (10)
C13—N2—C6 123.65 (10) C7—C8—C14 117.97 (11)
C13—N2—H2N 114.8 (10) C10—C9—C8 118.30 (11)
C6—N2—H2N 118.2 (10) C10—C9—C16 119.88 (11)
C6—C1—C2 113.08 (10) C8—C9—C16 121.80 (11)
C6—C1—H1A 109.0 C9—C10—C11 122.48 (12)
C2—C1—H1A 109.0 C9—C10—H10 118.8
C6—C1—H1B 109.0 C11—C10—H10 118.8
C2—C1—H1B 109.0 C10—C11—C12 119.18 (11)
H1A—C1—H1B 107.8 C10—C11—C15 117.49 (12)
C3—C2—C1 111.97 (11) C12—C11—C15 123.33 (11)
C3—C2—H2A 109.2 C11—C12—C7 119.93 (10)
C1—C2—H2A 109.2 C11—C12—C13 122.62 (10)
C3—C2—H2B 109.2 C7—C12—C13 117.22 (11)
C1—C2—H2B 109.2 O1—C13—N2 121.02 (11)
H2A—C2—H2B 107.9 O1—C13—C12 122.42 (11)
C2—C3—C4 110.60 (11) N2—C13—C12 116.43 (10)
C2—C3—H3A 109.5 N3—C14—C8 177.19 (13)
C4—C3—H3A 109.5 C11—C15—H15A 109.5
C2—C3—H3B 109.5 C11—C15—H15B 109.5
C4—C3—H3B 109.5 H15A—C15—H15B 109.5
H3A—C3—H3B 108.1 C11—C15—H15C 109.5
C3—C4—C5 110.76 (11) H15A—C15—H15C 109.5
C3—C4—H4A 109.5 H15B—C15—H15C 109.5
C5—C4—H4A 109.5 C17—C16—C21 118.90 (12)
C3—C4—H4B 109.5 C17—C16—C9 121.09 (12)
C5—C4—H4B 109.5 C21—C16—C9 119.96 (12)
H4A—C4—H4B 108.1 C18—C17—C16 120.52 (14)
C4—C5—C6 111.17 (10) C18—C17—H17 119.7
C4—C5—H5A 109.4 C16—C17—H17 119.7
C6—C5—H5A 109.4 C19—C18—C17 119.88 (15)
C4—C5—H5B 109.4 C19—C18—H18 120.1
C6—C5—H5B 109.4 C17—C18—H18 120.1
H5A—C5—H5B 108.0 C20—C19—C18 120.13 (13)
N2—C6—N1 106.03 (9) C20—C19—H19 119.9
N2—C6—C1 110.11 (9) C18—C19—H19 119.9
N1—C6—C1 108.50 (10) C19—C20—C21 120.33 (15)
N2—C6—C5 110.77 (10) C19—C20—H20 119.8
N1—C6—C5 111.09 (10) C21—C20—H20 119.8
C1—C6—C5 110.24 (10) C20—C21—C16 120.24 (15)
N1—C7—C12 119.96 (10) C20—C21—H21 119.9
N1—C7—C8 120.76 (10) C16—C21—H21 119.9
C6—C1—C2—C3 52.46 (14) C9—C10—C11—C15 177.78 (13)
C1—C2—C3—C4 −53.99 (14) C10—C11—C12—C7 −0.69 (19)
C2—C3—C4—C5 57.35 (14) C15—C11—C12—C7 −179.68 (13)
C3—C4—C5—C6 −58.74 (14) C10—C11—C12—C13 173.71 (12)
C13—N2—C6—N1 41.95 (15) C15—C11—C12—C13 −5.3 (2)
C13—N2—C6—C1 159.13 (11) N1—C7—C12—C11 179.85 (12)
C13—N2—C6—C5 −78.67 (14) C8—C7—C12—C11 3.05 (18)
C7—N1—C6—N2 −45.90 (14) N1—C7—C12—C13 5.16 (17)
C7—N1—C6—C1 −164.16 (10) C8—C7—C12—C13 −171.65 (11)
C7—N1—C6—C5 74.51 (14) C6—N2—C13—O1 168.01 (12)
C2—C1—C6—N2 69.94 (13) C6—N2—C13—C12 −16.04 (17)
C2—C1—C6—N1 −174.42 (10) C11—C12—C13—O1 −8.7 (2)
C2—C1—C6—C5 −52.57 (13) C7—C12—C13—O1 165.83 (12)
C4—C5—C6—N2 −66.58 (13) C11—C12—C13—N2 175.40 (12)
C4—C5—C6—N1 175.86 (10) C7—C12—C13—N2 −10.05 (17)
C4—C5—C6—C1 55.55 (13) C9—C8—C14—N3 −174 (3)
C6—N1—C7—C12 25.46 (17) C7—C8—C14—N3 6(3)
C6—N1—C7—C8 −157.79 (11) C10—C9—C16—C17 −134.73 (14)
N1—C7—C8—C9 179.65 (11) C8—C9—C16—C17 43.49 (19)
C12—C7—C8—C9 −3.57 (18) C10—C9—C16—C21 42.70 (18)
N1—C7—C8—C14 −0.92 (18) C8—C9—C16—C21 −139.07 (14)
C12—C7—C8—C14 175.86 (11) C21—C16—C17—C18 0.6 (2)
C7—C8—C9—C10 1.68 (18) C9—C16—C17—C18 178.05 (13)
C14—C8—C9—C10 −177.73 (12) C16—C17—C18—C19 −0.3 (2)
C7—C8—C9—C16 −176.57 (12) C17—C18—C19—C20 0.1 (2)
C14—C8—C9—C16 4.01 (19) C18—C19—C20—C21 0.0 (3)
C8—C9—C10—C11 0.8 (2) C19—C20—C21—C16 0.3 (2)
C16—C9—C10—C11 179.05 (12) C17—C16—C21—C20 −0.6 (2)
C9—C10—C11—C12 −1.3 (2) C9—C16—C21—C20 −178.06 (14)

Hydrogen-bond geometry (Å, °)

D—H···A D—H H···A D···A D—H···A
N2—H2N···Oli 0.920 (17) 1.998 (14) 2.9010 (17) 171.68 (14)
N1—H1N···N3ii 0.875 (18) 2.281 (14) 3.1188 (19) 160.24 (15)

Symmetry codes: (i) −x+2, −y+1, −z; (ii) −x+2, −y+2, −z+1.

Footnotes

Supplementary data and figures for this paper are available from the IUCr electronic archives (Reference: LD2014).

References

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Associated Data

This section collects any data citations, data availability statements, or supplementary materials included in this article.

Supplementary Materials

Crystal structure: contains datablock(s) I, global. DOI: 10.1107/S160053681102188X/ld2014sup1.cif

e-67-o1672-sup1.cif (21.1KB, cif)

Structure factors: contains datablock(s) I. DOI: 10.1107/S160053681102188X/ld2014Isup2.hkl

e-67-o1672-Isup2.hkl (221.5KB, hkl)

Supplementary material file. DOI: 10.1107/S160053681102188X/ld2014Isup3.cml

Additional supplementary materials: crystallographic information; 3D view; checkCIF report


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