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Acta Crystallographica Section E: Structure Reports Online logoLink to Acta Crystallographica Section E: Structure Reports Online
. 2011 Jun 30;67(Pt 7):m999. doi: 10.1107/S1600536811024755

Diaqua­bis­[1,2-bis­(pyridin-4-yl)ethene]­bis­[2-(4-carboxy­phen­yl)acetato]­cobalt(II)

Wei-Hua Yu a, Jian-Lan Liu a, Xiao-Ming Ren a,*
PMCID: PMC3152052  PMID: 21836970

Abstract

The asymmetric unit of the title compound, [Co(C9H7O4)2(C12H10N2)2(H2O)2], consists of one Co2+ ion, one mono-deprotonated 2-(4-carboxyl­atophen­yl)acetate carboxylic acid, one 1,2-bis­(pyridin-4-yl)ethane mol­ecule and one water mol­ecule. The CoII atom is situated on a crystallographic center of inversion and is octa­hedrally coordinated by two O atoms from two anions, two N atoms of two 1,2-bis­(pyridin-4-yl)ethane mol­ecules and two O atoms from two water mol­ecules. A three-dimensional network is established by inter­molecular O—H⋯O and O—H⋯N hydrogen bonds.

Related literature

For general background to the design of metal-organic supra­molecular solids with potential functionality, see: Moulton & Zaworotko (2001); Janiak (2003). For weak non-covalent inter­actions in supra­molecular solids, see: Hosseini (2005); Nishio (2004). For metal-organic supra­molecular frameworks based on organic connectors containing pyridyl and/or carboxyl­ate groups, see: Brammer (2004).graphic file with name e-67-0m999-scheme1.jpg

Experimental

Crystal data

  • [Co(C9H7O4)2(C12H10N2)2(H2O)2]

  • M r = 817.69

  • Monoclinic, Inline graphic

  • a = 21.349 (5) Å

  • b = 5.6522 (12) Å

  • c = 15.659 (4) Å

  • β = 98.999 (4)°

  • V = 1866.3 (7) Å3

  • Z = 2

  • Mo Kα radiation

  • μ = 0.53 mm−1

  • T = 293 K

  • 0.40 × 0.30 × 0.10 mm

Data collection

  • Bruker SMART CCD area-detector diffractometer

  • Absorption correction: multi-scan (SADABS; Bruker, 2000) T min = 0.850, T max = 0.874

  • 9499 measured reflections

  • 3635 independent reflections

  • 2640 reflections with I > 2σ(I)

  • R int = 0.041

Refinement

  • R[F 2 > 2σ(F 2)] = 0.055

  • wR(F 2) = 0.105

  • S = 1.06

  • 3635 reflections

  • 268 parameters

  • H atoms treated by a mixture of independent and constrained refinement

  • Δρmax = 0.71 e Å−3

  • Δρmin = −0.36 e Å−3

Data collection: SMART (Bruker, 2000); cell refinement: SAINT (Bruker, 2000); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: SHELXTL (Sheldrick, 2008); software used to prepare material for publication: SHELXTL.

Supplementary Material

Crystal structure: contains datablock(s) global, I. DOI: 10.1107/S1600536811024755/im2300sup1.cif

e-67-0m999-sup1.cif (19.1KB, cif)

Structure factors: contains datablock(s) I. DOI: 10.1107/S1600536811024755/im2300Isup2.hkl

e-67-0m999-Isup2.hkl (178.2KB, hkl)

Additional supplementary materials: crystallographic information; 3D view; checkCIF report

Table 1. Hydrogen-bond geometry (Å, °).

D—H⋯A D—H H⋯A DA D—H⋯A
O5—H5C⋯O1i 0.73 (4) 2.13 (4) 2.822 (3) 158 (4)
O5—H5D⋯O2ii 0.98 (4) 1.74 (4) 2.610 (3) 145 (3)
O3—H3⋯N2iii 0.82 1.85 2.667 (3) 173

Symmetry codes: (i) Inline graphic; (ii) Inline graphic; (iii) Inline graphic.

Acknowledgments

The authors thank Nanjing Xiaozhuang College of China for financial support (grant No. 2007NXY31).

supplementary crystallographic information

Comment

During the past decade, the design of new metal-organic supramolecular solids has attracted ever-increasing focus in the fields of coordination chemistry and crystal engineering, for the sake of developing desired crystalline materials with potential functionality (Moulton & Zaworotko, 2001; Janiak et al., 2003). Furthermore, it has been realised that weak noncovalent interactions such as hydrogen bonds, aromatic stacking, and van der Waals forces (Hosseini, 2005; Nishio, 2004) are crucial in the direction of such crystalline architectures. Hitherto, a variety of organic connectors containing pyridyl and/or carboxylate groups (Brammer, 2004) have been widely used to construct metal-organic supramolecular frameworks. Herein we report the crystal structure of the title compound (1).

The molecular structure of (1) is illustrated in Fig. 1. Compound (1) crystallizes in the monoclinic space group P21/c. The structure of (1) is a single molecule, in which the Co2+ center is situated on a crystallographic center of inversion. The coordination sphere of cobalt is a slightly distorted octahedron and consistes of by two O atoms from two mono-deprotonated (4-carboxyphenyl)acetate groups, two N atoms of two 1,2-di(pyridin-4-yl)ethane molecules and two O atoms from two water molecules. As shown in Fig. 2, a one-dimensional chain is formed by O–H···N hydrogen bonds. In addition, these one-dimensional chains are linked together by additional O—H···O hydrogen bonds between water molecules and the cobalt bound carboxylate group generating a three-dimensional framework.

Experimental

Cobalt chloride hexahydrate (1 mmol), 1,2-di(pyridin-4-yl)ethane (1 mmol) and (4-carboxyphenyl)acetic acid (1 mmol) in water (8 ml) were placed in a Teflon-lined stainless-steel Parr bomb that was heated to 433 K for 48 h. Red plate crystals were collected after the bomb was subsequently allowed to cool to room temperature (yield: 38%).

Refinement

C-bound H atoms were placed geometrically (C—H = 0.93, and 0.98 Å) and refined as riding atoms, with Uiso(H) = 1.2Ueq(C). O-bound H atoms were located in difference Fourier maps and refined as riding in their as-found relative positions (O—H =0.96 Å) with Uiso(H) = 1.5Ueq(C).

Figures

Fig. 1.

Fig. 1.

Molecular structure of (I), showing displacement ellipsoids at the 30% probability level.

Fig. 2.

Fig. 2.

One-dimensional chain structure of (I).

Crystal data

[Co(C9H7O4)2(C12H10N2)2(H2O)2] F(000) = 850
Mr = 817.69 Dx = 1.455 Mg m3
Monoclinic, P21/c Mo Kα radiation, λ = 0.71073 Å
Hall symbol: -P 2ybc Cell parameters from 870 reflections
a = 21.349 (5) Å θ = 2.6–22.1°
b = 5.6522 (12) Å µ = 0.53 mm1
c = 15.659 (4) Å T = 293 K
β = 98.999 (4)° Plate, red
V = 1866.3 (7) Å3 0.40 × 0.30 × 0.10 mm
Z = 2

Data collection

Bruker SMART CCD area-detector diffractometer 3635 independent reflections
Radiation source: fine-focus sealed tube 2640 reflections with I > 2σ(I)
graphite Rint = 0.041
φ and ω scans θmax = 26.0°, θmin = 1.9°
Absorption correction: multi-scan (SADABS; Bruker, 2000) h = −26→23
Tmin = 0.850, Tmax = 0.874 k = −6→6
9499 measured reflections l = −19→17

Refinement

Refinement on F2 Primary atom site location: structure-invariant direct methods
Least-squares matrix: full Secondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.055 Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.105 H atoms treated by a mixture of independent and constrained refinement
S = 1.06 w = 1/[σ2(Fo2) + (0.040P)2 + 0.440P] where P = (Fo2 + 2Fc2)/3
3635 reflections (Δ/σ)max < 0.001
268 parameters Δρmax = 0.71 e Å3
0 restraints Δρmin = −0.36 e Å3

Special details

Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.

Fractional atomic coordinates and isotropic or equivalent isotropic displacement parameters (Å2)

x y z Uiso*/Ueq
C1 0.13939 (13) 0.6024 (5) 0.07330 (17) 0.0285 (6)
H1 0.1308 0.7388 0.0404 0.034*
C2 0.21300 (13) 0.3771 (6) 0.16945 (19) 0.0324 (7)
C3 0.16536 (14) 0.2132 (6) 0.1675 (2) 0.0418 (8)
H3A 0.1727 0.0750 0.1997 0.050*
C4 0.19847 (13) 0.5792 (5) 0.11978 (18) 0.0305 (7)
H4 0.2287 0.6969 0.1183 0.037*
C5 0.10794 (14) 0.2501 (5) 0.11927 (19) 0.0360 (7)
H5A 0.0771 0.1338 0.1194 0.043*
C6 0.27478 (13) 0.3325 (6) 0.2271 (2) 0.0446 (8)
H6 0.2805 0.2017 0.2635 0.053*
C7 0.32607 (15) 0.5046 (7) 0.2236 (2) 0.0542 (9)
H7 0.3213 0.6348 0.1868 0.065*
C8 0.38736 (14) 0.4545 (6) 0.2844 (2) 0.0435 (8)
C9 0.43624 (15) 0.6125 (7) 0.2885 (2) 0.0480 (9)
H9 0.4317 0.7491 0.2549 0.058*
C10 0.49294 (15) 0.5670 (6) 0.3433 (2) 0.0418 (8)
H10 0.5263 0.6730 0.3439 0.050*
C11 0.45391 (15) 0.2330 (6) 0.3909 (2) 0.0467 (9)
H11 0.4588 0.1017 0.4271 0.056*
C12 0.39688 (15) 0.2605 (6) 0.3370 (2) 0.0476 (9)
H12 0.3651 0.1477 0.3363 0.057*
C25 0.09958 (12) 0.8462 (5) −0.19283 (18) 0.0311 (6)
H25A 0.1055 0.7968 −0.2504 0.037*
H25B 0.0775 0.9968 −0.1978 0.037*
C26 0.16362 (13) 0.8760 (5) −0.13681 (18) 0.0290 (6)
C27 0.17905 (14) 1.0732 (5) −0.0867 (2) 0.0333 (7)
H27 0.1497 1.1953 −0.0881 0.040*
C28 0.23634 (15) 1.0942 (6) −0.0351 (2) 0.0422 (8)
H28 0.2446 1.2272 −0.0002 0.051*
C29 0.28176 (14) 0.9246 (6) −0.0335 (2) 0.0387 (7)
C30 0.26777 (14) 0.7226 (6) −0.0820 (2) 0.0447 (8)
H30 0.2978 0.6031 −0.0811 0.054*
C31 0.20875 (14) 0.6992 (6) −0.1321 (2) 0.0408 (8)
H31 0.1992 0.5607 −0.1635 0.049*
C32 0.34424 (16) 0.9532 (6) 0.0221 (2) 0.0494 (9)
C50 0.05974 (12) 0.6632 (5) −0.15437 (17) 0.0237 (6)
Co1 0.0000 0.5000 0.0000 0.02453 (15)
H5C −0.0226 (18) 0.907 (7) 0.078 (3) 0.057 (13)*
H5D −0.0072 (15) 0.719 (6) 0.134 (2) 0.049 (10)*
N1 0.09278 (10) 0.4435 (4) 0.07147 (14) 0.0278 (5)
N2 0.50139 (12) 0.3794 (5) 0.39444 (17) 0.0417 (6)
O1 0.03952 (8) 0.7233 (3) −0.08597 (11) 0.0252 (4)
O2 0.05249 (10) 0.4649 (4) −0.18973 (14) 0.0392 (5)
O3 0.38617 (10) 0.7984 (4) 0.00934 (15) 0.0448 (6)
H3 0.4191 0.8232 0.0426 0.067*
O4 0.35646 (11) 1.1161 (4) 0.07192 (15) 0.0506 (6)
O5 −0.00449 (10) 0.7965 (4) 0.07875 (14) 0.0308 (5)

Atomic displacement parameters (Å2)

U11 U22 U33 U12 U13 U23
C1 0.0255 (14) 0.0263 (14) 0.0317 (15) −0.0001 (11) −0.0015 (11) 0.0051 (12)
C2 0.0228 (15) 0.0414 (18) 0.0314 (15) 0.0045 (12) −0.0004 (12) −0.0013 (13)
C3 0.0411 (17) 0.0279 (17) 0.052 (2) −0.0034 (14) −0.0078 (14) 0.0124 (15)
C4 0.0254 (14) 0.0280 (16) 0.0360 (16) −0.0053 (11) −0.0017 (12) 0.0017 (12)
C5 0.0329 (15) 0.0323 (17) 0.0372 (17) −0.0017 (13) −0.0112 (12) 0.0083 (13)
C6 0.0238 (16) 0.050 (2) 0.056 (2) 0.0032 (14) −0.0049 (14) 0.0141 (17)
C7 0.0407 (18) 0.056 (2) 0.061 (2) −0.0067 (18) −0.0091 (15) 0.023 (2)
C8 0.0303 (16) 0.043 (2) 0.055 (2) −0.0009 (14) −0.0020 (13) 0.0019 (15)
C9 0.0383 (19) 0.050 (2) 0.053 (2) −0.0036 (15) −0.0021 (15) 0.0131 (17)
C10 0.0357 (17) 0.042 (2) 0.0446 (19) −0.0083 (14) −0.0035 (14) −0.0042 (14)
C11 0.0469 (19) 0.0385 (19) 0.0453 (19) −0.0024 (15) −0.0222 (15) 0.0135 (15)
C12 0.0373 (18) 0.051 (2) 0.048 (2) −0.0097 (16) −0.0121 (15) 0.0094 (17)
C25 0.0254 (14) 0.0341 (17) 0.0340 (15) −0.0005 (12) 0.0056 (12) 0.0059 (13)
C26 0.0241 (14) 0.0337 (16) 0.0301 (15) −0.0018 (12) 0.0069 (11) −0.0003 (12)
C27 0.0326 (16) 0.0210 (16) 0.0469 (18) 0.0048 (11) 0.0086 (13) 0.0006 (12)
C28 0.0408 (19) 0.0344 (18) 0.054 (2) −0.0039 (14) 0.0135 (15) −0.0099 (15)
C29 0.0296 (15) 0.044 (2) 0.0424 (17) −0.0057 (13) 0.0056 (13) −0.0033 (14)
C30 0.0256 (15) 0.052 (2) 0.054 (2) 0.0122 (15) −0.0021 (13) −0.0096 (17)
C31 0.0404 (17) 0.0326 (17) 0.0480 (19) 0.0022 (14) 0.0024 (14) −0.0182 (14)
C32 0.0381 (18) 0.053 (2) 0.054 (2) −0.0008 (16) −0.0024 (15) −0.0161 (18)
C50 0.0207 (12) 0.0236 (15) 0.0258 (13) 0.0028 (11) 0.0003 (10) 0.0029 (11)
Co1 0.0269 (3) 0.0223 (3) 0.0237 (3) 0.0004 (2) 0.00182 (19) 0.0014 (2)
N1 0.0252 (12) 0.0271 (13) 0.0307 (12) 0.0007 (9) 0.0033 (9) 0.0002 (9)
N2 0.0315 (14) 0.0433 (16) 0.0461 (16) 0.0071 (12) −0.0069 (12) −0.0035 (13)
O1 0.0242 (9) 0.0268 (10) 0.0264 (10) −0.0013 (8) 0.0093 (8) 0.0018 (8)
O2 0.0491 (13) 0.0258 (12) 0.0478 (13) −0.0078 (10) 0.0238 (10) −0.0055 (9)
O3 0.0347 (12) 0.0444 (14) 0.0466 (13) 0.0077 (11) −0.0200 (10) −0.0051 (11)
O4 0.0511 (15) 0.0463 (14) 0.0473 (14) 0.0075 (11) −0.0141 (11) −0.0127 (12)
O5 0.0390 (11) 0.0199 (11) 0.0365 (12) 0.0029 (9) 0.0150 (9) 0.0008 (9)

Geometric parameters (Å, °)

C1—N1 1.338 (3) C25—H25A 0.9700
C1—C4 1.360 (4) C25—H25B 0.9700
C1—H1 0.9300 C26—C27 1.373 (4)
C2—C3 1.373 (4) C26—C31 1.382 (4)
C2—C4 1.389 (4) C27—C28 1.362 (4)
C2—C6 1.498 (4) C27—H27 0.9300
C3—C5 1.352 (4) C28—C29 1.361 (4)
C3—H3A 0.9300 C28—H28 0.9300
C4—H4 0.9300 C29—C30 1.378 (5)
C5—N1 1.335 (4) C29—C32 1.483 (4)
C5—H5A 0.9300 C30—C31 1.383 (4)
C6—C7 1.472 (5) C30—H30 0.9300
C6—H6 0.9300 C31—H31 0.9300
C7—C8 1.520 (4) C32—O4 1.209 (4)
C7—H7 0.9300 C32—O3 1.290 (4)
C8—C12 1.367 (5) C50—O2 1.249 (3)
C8—C9 1.367 (5) C50—O1 1.262 (3)
C9—C10 1.394 (4) Co1—O5 2.092 (2)
C9—H9 0.9300 Co1—O5i 2.092 (2)
C10—N2 1.324 (4) Co1—O1i 2.1149 (17)
C10—H10 0.9300 Co1—O1 2.1149 (17)
C11—N2 1.303 (4) Co1—N1i 2.141 (2)
C11—C12 1.378 (4) Co1—N1 2.141 (2)
C11—H11 0.9300 O3—H3 0.8200
C12—H12 0.9300 O5—H5C 0.73 (4)
C25—C26 1.514 (4) O5—H5D 0.98 (4)
C25—C50 1.522 (4)
N1—C1—C4 124.8 (3) C28—C27—C26 121.5 (3)
N1—C1—H1 117.6 C28—C27—H27 119.2
C4—C1—H1 117.6 C26—C27—H27 119.2
C3—C2—C4 116.3 (3) C29—C28—C27 121.4 (3)
C3—C2—C6 118.6 (3) C29—C28—H28 119.3
C4—C2—C6 125.0 (3) C27—C28—H28 119.3
C5—C3—C2 120.8 (3) C28—C29—C30 118.7 (3)
C5—C3—H3A 119.6 C28—C29—C32 120.5 (3)
C2—C3—H3A 119.6 C30—C29—C32 120.8 (3)
C1—C4—C2 119.1 (3) C29—C30—C31 119.5 (3)
C1—C4—H4 120.5 C29—C30—H30 120.3
C2—C4—H4 120.5 C31—C30—H30 120.3
N1—C5—C3 124.0 (3) C26—C31—C30 121.8 (3)
N1—C5—H5A 118.0 C26—C31—H31 119.1
C3—C5—H5A 118.0 C30—C31—H31 119.1
C7—C6—C2 117.1 (3) O4—C32—O3 122.1 (3)
C7—C6—H6 121.4 O4—C32—C29 123.0 (3)
C2—C6—H6 121.4 O3—C32—C29 114.7 (3)
C6—C7—C8 115.2 (3) O2—C50—O1 125.6 (2)
C6—C7—H7 122.4 O2—C50—C25 118.2 (2)
C8—C7—H7 122.4 O1—C50—C25 116.1 (2)
C12—C8—C9 117.1 (3) O5—Co1—O5i 180.00 (10)
C12—C8—C7 124.0 (3) O5—Co1—O1i 92.48 (8)
C9—C8—C7 118.9 (3) O5i—Co1—O1i 87.52 (8)
C8—C9—C10 119.4 (3) O5—Co1—O1 87.52 (8)
C8—C9—H9 120.3 O5i—Co1—O1 92.48 (8)
C10—C9—H9 120.3 O1i—Co1—O1 180.00 (7)
N2—C10—C9 122.9 (3) O5—Co1—N1i 93.70 (9)
N2—C10—H10 118.5 O5i—Co1—N1i 86.30 (9)
C9—C10—H10 118.5 O1i—Co1—N1i 89.61 (8)
N2—C11—C12 124.1 (3) O1—Co1—N1i 90.39 (8)
N2—C11—H11 117.9 O5—Co1—N1 86.30 (9)
C12—C11—H11 117.9 O5i—Co1—N1 93.70 (9)
C8—C12—C11 119.6 (3) O1i—Co1—N1 90.39 (8)
C8—C12—H12 120.2 O1—Co1—N1 89.61 (8)
C11—C12—H12 120.2 N1i—Co1—N1 180.00 (13)
C26—C25—C50 110.9 (2) C5—N1—C1 115.0 (2)
C26—C25—H25A 109.5 C5—N1—Co1 122.57 (19)
C50—C25—H25A 109.5 C1—N1—Co1 122.36 (19)
C26—C25—H25B 109.5 C11—N2—C10 116.8 (3)
C50—C25—H25B 109.5 C50—O1—Co1 127.08 (17)
H25A—C25—H25B 108.1 C32—O3—H3 109.5
C27—C26—C31 117.0 (3) Co1—O5—H5C 138 (3)
C27—C26—C25 122.4 (3) Co1—O5—H5D 100 (2)
C31—C26—C25 120.6 (3) H5C—O5—H5D 107 (3)

Symmetry codes: (i) −x, −y+1, −z.

Hydrogen-bond geometry (Å, °)

D—H···A D—H H···A D···A D—H···A
O5—H5C···O1ii 0.73 (4) 2.13 (4) 2.822 (3) 158 (4)
O5—H5D···O2i 0.98 (4) 1.74 (4) 2.610 (3) 145 (3)
O3—H3···N2iii 0.82 1.85 2.667 (3) 173.

Symmetry codes: (ii) −x, −y+2, −z; (i) −x, −y+1, −z; (iii) −x+1, y+1/2, −z+1/2.

Footnotes

Supplementary data and figures for this paper are available from the IUCr electronic archives (Reference: IM2300).

References

  1. Brammer, L. (2004). Chem. Soc. Rev. 33, 476–489.
  2. Bruker (2000). SMART, SAINT and SADABS Bruker AXS Inc., Madison, Wisconsin, USA.
  3. Hosseini, M. W. (2005). Acc. Chem. Res. 38, 313–323. [DOI] [PubMed]
  4. Janiak, C. (2003). Dalton Trans. pp. 2781–2804.
  5. Moulton, B. & Zaworotko, M. J. (2001). Chem. Rev. 101, 1629–1658. [DOI] [PubMed]
  6. Nishio, M. (2004). CrystEngComn. 6, 130–158.
  7. Sheldrick, G. M. (2008). Acta Cryst. A64, 112–122. [DOI] [PubMed]

Associated Data

This section collects any data citations, data availability statements, or supplementary materials included in this article.

Supplementary Materials

Crystal structure: contains datablock(s) global, I. DOI: 10.1107/S1600536811024755/im2300sup1.cif

e-67-0m999-sup1.cif (19.1KB, cif)

Structure factors: contains datablock(s) I. DOI: 10.1107/S1600536811024755/im2300Isup2.hkl

e-67-0m999-Isup2.hkl (178.2KB, hkl)

Additional supplementary materials: crystallographic information; 3D view; checkCIF report


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