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Acta Crystallographica Section E: Structure Reports Online logoLink to Acta Crystallographica Section E: Structure Reports Online
. 2011 Jun 25;67(Pt 7):m978. doi: 10.1107/S1600536811024214

trans-Bis(N′-isopropyl­idene­benzo­hydrazidato-κ2 N′,O)bis­(pyridine-κN)nickel(II)

Chang-Zheng Zheng a, Liang Wang a,*, Juan Liu a
PMCID: PMC3152089  PMID: 21836952

Abstract

The complex mol­ecule of the title compound, [Ni(C10H11N2O)2(C5H5N)2], has a crystallographically imposed centre of symmetry. The NiII atom is coordinated in a distorted octa­hedral geometry by the O and N atoms of two trans arranged anionic bidentate hydrazone ligands forming the equatorial plane and by the N atoms of two pyridine mol­ecules at the axial positions. In the crystal, inter­molecular C—H⋯N hydrogen bonds link the mol­ecules into columns parallel to the b axis.

Related literature

For the biological and coordination properties of aroylhydrazones, see: Ali et al. (2004); Carcelli et al. (1995); Cheng et al. (1996); Zhang et al. (2011).graphic file with name e-67-0m978-scheme1.jpg

Experimental

Crystal data

  • [Ni(C10H11N2O)2(C5H5N)2]

  • M r = 567.33

  • Monoclinic, Inline graphic

  • a = 15.419 (5) Å

  • b = 9.242 (3) Å

  • c = 21.295 (9) Å

  • β = 109.924 (5)°

  • V = 2853.1 (18) Å3

  • Z = 4

  • Mo Kα radiation

  • μ = 0.72 mm−1

  • T = 298 K

  • 0.23 × 0.14 × 0.12 mm

Data collection

  • Bruker SMART CCD area-detector diffractometer

  • Absorption correction: multi-scan (SADABS; Sheldrick, 1996) T min = 0.852, T max = 0.919

  • 7093 measured reflections

  • 2514 independent reflections

  • 2285 reflections with I > 2σ(I)

  • R int = 0.019

Refinement

  • R[F 2 > 2σ(F 2)] = 0.028

  • wR(F 2) = 0.078

  • S = 1.10

  • 2514 reflections

  • 178 parameters

  • H-atom parameters constrained

  • Δρmax = 0.24 e Å−3

  • Δρmin = −0.32 e Å−3

Data collection: SMART (Bruker, 1996); cell refinement: SAINT (Bruker, 1996); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: SHELXTL (Sheldrick, 2008); software used to prepare material for publication: SHELXTL.

Supplementary Material

Crystal structure: contains datablock(s) I, global. DOI: 10.1107/S1600536811024214/rz2613sup1.cif

e-67-0m978-sup1.cif (19.3KB, cif)

Structure factors: contains datablock(s) I. DOI: 10.1107/S1600536811024214/rz2613Isup2.hkl

e-67-0m978-Isup2.hkl (123.6KB, hkl)

Additional supplementary materials: crystallographic information; 3D view; checkCIF report

Table 1. Hydrogen-bond geometry (Å, °).

D—H⋯A D—H H⋯A DA D—H⋯A
C13—H13⋯N1i 0.93 2.50 3.382 (3) 157

Symmetry code: (i) Inline graphic.

Acknowledgments

The authors thank the National Natural Science Foundation of Shaanxi Province, China (2009JM2012) for financial support.

supplementary crystallographic information

Comment

Hydrazones are an important class of Schiff bases compounds which has attracted much attention because of their biological activities (Carcelli et al., 1995), chemical and industrial versatility, and strong tendency to chelate to transition metals (Zhang et al., 2011; Ali et al., 2004; Cheng et al., 1996). As an extension of our work on the structural characterization of aroylhydrazone derivatives, the title compound was synthesized and its crystal structure is reported here.

In the title compound, the complex molecule has crystallographically imposed centre of symmetry (Fig. 1). The coordination polyhedron about the nickel metal is distorted octahedral, with the N, O atoms of two trans-arranged anionic bidentate hydrazone ligands at the equatorial plane and by the N atoms of two pyridine molecules occupying the axial positions. In the crystal structure, complex molecules are linked by intermolecular C—H···N hydrogen bonds (Table 1) into columns parallel to the b axis.

Experimental

Ethyl benzoate (6.00 g, 0.04 mol) was dissolved in ethnol (30 ml) at room temperature and heated at 363 K, followed by the addition of hydrazine hydrate (2.40 g, 0.048 mol). Subsequently, the mixture was refluxed for 9 h, and then cooled to room temperature. The crystals precipitated were collected by filtration. The product was recrystallized from ethanol and dried under reduced pressure to give benzoylhydrazine. Benzoylhydrazine (3.40 g, 0.025 mol) was dissolved in ethanol (20 ml) at room temperature and heated at 363 K, followed by the addition of dimethyl ketone (1.45 g, 0.025 mol). Subsequently, the mixture was refluxed for 10 h, and then cooled to room temperature. The solid phase precipitated was collected by filtration. The product was recrystallized from ethanol and dried under reduced pressure to give N'-[(E)- dimethylketone]-benzohydrazide. A mixture of N'-[(E)-dimethylketone]-benzohydrazide (0.018 g, 0.10 mmol), NiCl2.6H2O (0.024 g, 0.10 mmol), pyridine (0.0079 g, 0.10 mmol), H2O (5.00 ml) and several drop of methanol was placed in a Parr Teflon-lined stainless steel vessel (25 ml), and then the vessel was sealed and heated at 393 K for 3 d. After the mixture was slowly cooled to room temperature, red crystals suitable for X-ray analysis were obtained (yield 37%).

Refinement

All H atoms were positioned geometrically and treated as riding on their parent atoms,with C—H = 0.93-0.96 Å, and with Uiso(H) = 1.2Ueq(C) or 1.5Ueq(C) for methyl H atoms.

Figures

Fig. 1.

Fig. 1.

The molecular structure of the title compound, showing displacement ellipsoids drawn at the 30% probability level. H atoms are presented as small spheres of arbitrary radius. Symmetry code: (A) -x, 1-y, -z.

Crystal data

[Ni(C10H11N2O)2(C5H5N)2] F(000) = 1192
Mr = 567.33 Dx = 1.321 Mg m3
Monoclinic, C2/c Mo Kα radiation, λ = 0.71073 Å
Hall symbol: -C 2yc Cell parameters from 5423 reflections
a = 15.419 (5) Å θ = 2.6–28.5°
b = 9.242 (3) Å µ = 0.72 mm1
c = 21.295 (9) Å T = 298 K
β = 109.924 (5)° Block, red
V = 2853.1 (18) Å3 0.23 × 0.14 × 0.12 mm
Z = 4

Data collection

Bruker SMART CCD area-detector diffractometer 2514 independent reflections
Radiation source: fine-focus sealed tube 2285 reflections with I > 2σ(I)
graphite Rint = 0.019
φ and ω scans θmax = 25.1°, θmin = 2.0°
Absorption correction: multi-scan (SADABS; Sheldrick, 1996) h = −18→16
Tmin = 0.852, Tmax = 0.919 k = −10→8
7093 measured reflections l = −24→25

Refinement

Refinement on F2 Secondary atom site location: difference Fourier map
Least-squares matrix: full Hydrogen site location: inferred from neighbouring sites
R[F2 > 2σ(F2)] = 0.028 H-atom parameters constrained
wR(F2) = 0.078 w = 1/[σ2(Fo2) + (0.0334P)2 + 2.5175P] where P = (Fo2 + 2Fc2)/3
S = 1.10 (Δ/σ)max < 0.001
2514 reflections Δρmax = 0.24 e Å3
178 parameters Δρmin = −0.32 e Å3
0 restraints Extinction correction: SHELXL97 (Sheldrick, 2008)
Primary atom site location: structure-invariant direct methods Extinction coefficient: 0.0113 (15)

Special details

Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.

Fractional atomic coordinates and isotropic or equivalent isotropic displacement parameters (Å2)

x y z Uiso*/Ueq
Ni1 0.0000 0.5000 0.0000 0.03337 (12)
O1 0.12440 (8) 0.44811 (14) 0.06671 (6) 0.0385 (3)
N1 0.04126 (10) 0.34430 (16) 0.12653 (8) 0.0393 (4)
N2 −0.03583 (10) 0.40836 (16) 0.07882 (7) 0.0375 (3)
N3 0.00804 (10) 0.71169 (16) 0.04278 (7) 0.0383 (3)
C1 0.28411 (15) 0.3172 (3) 0.14883 (12) 0.0636 (6)
H1 0.2865 0.3759 0.1140 0.076*
C2 0.36373 (18) 0.2488 (4) 0.18906 (15) 0.0871 (9)
H2 0.4190 0.2619 0.1812 0.104*
C3 0.36080 (19) 0.1624 (3) 0.23998 (14) 0.0788 (8)
H3 0.4138 0.1154 0.2668 0.095*
C4 0.27956 (18) 0.1450 (3) 0.25151 (12) 0.0665 (7)
H4 0.2775 0.0861 0.2864 0.080*
C5 0.20085 (15) 0.2138 (2) 0.21199 (10) 0.0504 (5)
H5 0.1462 0.2020 0.2208 0.061*
C6 0.20201 (13) 0.2999 (2) 0.15964 (9) 0.0397 (4)
C7 0.11672 (12) 0.37097 (18) 0.11420 (9) 0.0348 (4)
C8 −0.11104 (14) 0.3927 (2) 0.09097 (10) 0.0474 (5)
C9 −0.11699 (18) 0.3144 (3) 0.15068 (13) 0.0741 (8)
H9A −0.1454 0.2217 0.1373 0.111*
H9B −0.1534 0.3699 0.1707 0.111*
H9C −0.0561 0.3012 0.1825 0.111*
C10 −0.19837 (15) 0.4545 (3) 0.04456 (13) 0.0654 (6)
H10A −0.1871 0.4978 0.0071 0.098*
H10B −0.2210 0.5267 0.0675 0.098*
H10C −0.2434 0.3790 0.0291 0.098*
C11 0.08853 (14) 0.7625 (2) 0.08221 (11) 0.0529 (5)
H11 0.1406 0.7046 0.0902 0.063*
C12 0.09888 (16) 0.8958 (2) 0.11177 (13) 0.0646 (6)
H12 0.1566 0.9265 0.1397 0.078*
C13 0.02369 (17) 0.9830 (2) 0.09987 (12) 0.0551 (6)
H13 0.0289 1.0742 0.1193 0.066*
C14 −0.05893 (15) 0.9331 (2) 0.05897 (12) 0.0554 (5)
H14 −0.1115 0.9902 0.0496 0.066*
C15 −0.06440 (14) 0.7977 (2) 0.03149 (11) 0.0497 (5)
H15 −0.1216 0.7648 0.0037 0.060*

Atomic displacement parameters (Å2)

U11 U22 U33 U12 U13 U23
Ni1 0.02844 (18) 0.03087 (18) 0.03696 (19) 0.00162 (12) 0.00618 (13) 0.00258 (13)
O1 0.0330 (6) 0.0372 (7) 0.0409 (7) 0.0014 (5) 0.0068 (5) 0.0065 (6)
N1 0.0378 (8) 0.0370 (8) 0.0406 (8) 0.0051 (7) 0.0101 (7) 0.0043 (7)
N2 0.0345 (8) 0.0331 (8) 0.0427 (8) 0.0019 (6) 0.0106 (7) 0.0009 (6)
N3 0.0373 (8) 0.0346 (8) 0.0404 (8) −0.0003 (7) 0.0099 (7) 0.0009 (6)
C1 0.0458 (12) 0.0827 (17) 0.0591 (14) 0.0196 (12) 0.0138 (10) 0.0214 (12)
C2 0.0473 (14) 0.126 (3) 0.0819 (19) 0.0321 (16) 0.0147 (13) 0.0277 (19)
C3 0.0627 (16) 0.0872 (19) 0.0689 (17) 0.0342 (14) −0.0003 (13) 0.0178 (14)
C4 0.0732 (17) 0.0562 (14) 0.0525 (13) 0.0089 (12) −0.0014 (12) 0.0165 (11)
C5 0.0527 (12) 0.0444 (11) 0.0458 (11) 0.0008 (10) 0.0061 (9) 0.0033 (9)
C6 0.0409 (10) 0.0333 (9) 0.0375 (10) 0.0046 (8) 0.0039 (8) −0.0028 (7)
C7 0.0371 (9) 0.0268 (9) 0.0354 (9) 0.0020 (7) 0.0059 (7) −0.0035 (7)
C8 0.0410 (10) 0.0492 (11) 0.0549 (12) 0.0033 (9) 0.0201 (9) 0.0051 (9)
C9 0.0614 (15) 0.094 (2) 0.0782 (17) 0.0140 (14) 0.0386 (13) 0.0308 (15)
C10 0.0394 (11) 0.0851 (17) 0.0734 (16) 0.0077 (12) 0.0213 (11) 0.0201 (14)
C11 0.0404 (11) 0.0412 (11) 0.0693 (14) 0.0015 (9) 0.0087 (10) −0.0077 (10)
C12 0.0497 (13) 0.0499 (13) 0.0834 (17) −0.0085 (10) 0.0086 (12) −0.0191 (12)
C13 0.0625 (14) 0.0358 (11) 0.0698 (15) −0.0047 (10) 0.0261 (12) −0.0104 (10)
C14 0.0507 (12) 0.0463 (12) 0.0691 (14) 0.0106 (10) 0.0204 (11) −0.0057 (11)
C15 0.0387 (10) 0.0480 (11) 0.0577 (12) 0.0028 (9) 0.0104 (9) −0.0089 (10)

Geometric parameters (Å, °)

Ni1—O1i 2.0175 (13) C5—C6 1.374 (3)
Ni1—O1 2.0175 (13) C5—H5 0.9300
Ni1—N2 2.1148 (16) C6—C7 1.493 (2)
Ni1—N2i 2.1148 (16) C8—C10 1.486 (3)
Ni1—N3 2.1439 (16) C8—C9 1.493 (3)
Ni1—N3i 2.1439 (16) C9—H9A 0.9600
O1—C7 1.275 (2) C9—H9B 0.9600
N1—C7 1.301 (2) C9—H9C 0.9600
N1—N2 1.404 (2) C10—H10A 0.9600
N2—C8 1.279 (2) C10—H10B 0.9600
N3—C15 1.325 (2) C10—H10C 0.9600
N3—C11 1.325 (2) C11—C12 1.368 (3)
C1—C6 1.371 (3) C11—H11 0.9300
C1—C2 1.387 (3) C12—C13 1.363 (3)
C1—H1 0.9300 C12—H12 0.9300
C2—C3 1.360 (4) C13—C14 1.356 (3)
C2—H2 0.9300 C13—H13 0.9300
C3—C4 1.366 (4) C14—C15 1.372 (3)
C3—H3 0.9300 C14—H14 0.9300
C4—C5 1.375 (3) C15—H15 0.9300
C4—H4 0.9300
O1i—Ni1—O1 180.00 (9) C4—C5—H5 119.6
O1i—Ni1—N2 102.19 (6) C1—C6—C5 118.16 (19)
O1—Ni1—N2 77.81 (6) C1—C6—C7 119.95 (18)
O1i—Ni1—N2i 77.81 (6) C5—C6—C7 121.87 (18)
O1—Ni1—N2i 102.19 (6) O1—C7—N1 126.67 (16)
N2—Ni1—N2i 180.00 (8) O1—C7—C6 117.41 (16)
O1i—Ni1—N3 89.18 (6) N1—C7—C6 115.89 (16)
O1—Ni1—N3 90.82 (6) N2—C8—C10 120.02 (18)
N2—Ni1—N3 91.21 (6) N2—C8—C9 123.37 (19)
N2i—Ni1—N3 88.79 (6) C10—C8—C9 116.61 (18)
O1i—Ni1—N3i 90.82 (6) C8—C9—H9A 109.5
O1—Ni1—N3i 89.18 (6) C8—C9—H9B 109.5
N2—Ni1—N3i 88.79 (6) H9A—C9—H9B 109.5
N2i—Ni1—N3i 91.21 (6) C8—C9—H9C 109.5
N3—Ni1—N3i 180.00 (8) H9A—C9—H9C 109.5
C7—O1—Ni1 111.61 (11) H9B—C9—H9C 109.5
C7—N1—N2 111.65 (14) C8—C10—H10A 109.5
C8—N2—N1 114.09 (16) C8—C10—H10B 109.5
C8—N2—Ni1 134.88 (14) H10A—C10—H10B 109.5
N1—N2—Ni1 110.93 (11) C8—C10—H10C 109.5
C15—N3—C11 116.89 (17) H10A—C10—H10C 109.5
C15—N3—Ni1 123.21 (13) H10B—C10—H10C 109.5
C11—N3—Ni1 119.90 (13) N3—C11—C12 123.2 (2)
C6—C1—C2 121.1 (2) N3—C11—H11 118.4
C6—C1—H1 119.5 C12—C11—H11 118.4
C2—C1—H1 119.5 C13—C12—C11 119.3 (2)
C3—C2—C1 119.8 (3) C13—C12—H12 120.4
C3—C2—H2 120.1 C11—C12—H12 120.4
C1—C2—H2 120.1 C14—C13—C12 118.2 (2)
C2—C3—C4 119.6 (2) C14—C13—H13 120.9
C2—C3—H3 120.2 C12—C13—H13 120.9
C4—C3—H3 120.2 C13—C14—C15 119.5 (2)
C3—C4—C5 120.5 (2) C13—C14—H14 120.3
C3—C4—H4 119.7 C15—C14—H14 120.3
C5—C4—H4 119.7 N3—C15—C14 123.00 (19)
C6—C5—C4 120.8 (2) N3—C15—H15 118.5
C6—C5—H5 119.6 C14—C15—H15 118.5
N2—Ni1—O1—C7 9.82 (11) C3—C4—C5—C6 0.8 (4)
N2i—Ni1—O1—C7 −170.18 (11) C2—C1—C6—C5 0.7 (4)
N3—Ni1—O1—C7 100.88 (12) C2—C1—C6—C7 −178.0 (2)
N3i—Ni1—O1—C7 −79.12 (12) C4—C5—C6—C1 −1.2 (3)
C7—N1—N2—C8 −175.97 (16) C4—C5—C6—C7 177.42 (19)
C7—N1—N2—Ni1 7.01 (17) Ni1—O1—C7—N1 −10.2 (2)
O1i—Ni1—N2—C8 −5.3 (2) Ni1—O1—C7—C6 168.00 (12)
O1—Ni1—N2—C8 174.7 (2) N2—N1—C7—O1 1.9 (2)
N3—Ni1—N2—C8 84.12 (19) N2—N1—C7—C6 −176.30 (14)
N3i—Ni1—N2—C8 −95.88 (19) C1—C6—C7—O1 −0.9 (3)
O1i—Ni1—N2—N1 170.85 (10) C5—C6—C7—O1 −179.55 (17)
O1—Ni1—N2—N1 −9.15 (10) C1—C6—C7—N1 177.46 (19)
N3—Ni1—N2—N1 −99.72 (11) C5—C6—C7—N1 −1.2 (3)
N3i—Ni1—N2—N1 80.28 (11) N1—N2—C8—C10 −179.78 (19)
O1i—Ni1—N3—C15 16.25 (16) Ni1—N2—C8—C10 −3.7 (3)
O1—Ni1—N3—C15 −163.75 (16) N1—N2—C8—C9 0.4 (3)
N2—Ni1—N3—C15 −85.93 (16) Ni1—N2—C8—C9 176.48 (18)
N2i—Ni1—N3—C15 94.07 (16) C15—N3—C11—C12 1.2 (3)
O1i—Ni1—N3—C11 −163.18 (16) Ni1—N3—C11—C12 −179.37 (19)
O1—Ni1—N3—C11 16.82 (16) N3—C11—C12—C13 −1.0 (4)
N2—Ni1—N3—C11 94.64 (16) C11—C12—C13—C14 0.2 (4)
N2i—Ni1—N3—C11 −85.36 (16) C12—C13—C14—C15 0.4 (4)
C6—C1—C2—C3 0.3 (5) C11—N3—C15—C14 −0.5 (3)
C1—C2—C3—C4 −0.7 (5) Ni1—N3—C15—C14 −179.99 (17)
C2—C3—C4—C5 0.1 (4) C13—C14—C15—N3 −0.2 (4)

Symmetry codes: (i) −x, −y+1, −z.

Hydrogen-bond geometry (Å, °)

D—H···A D—H H···A D···A D—H···A
C13—H13···N1ii 0.93 2.50 3.382 (3) 157

Symmetry codes: (ii) x, y+1, z.

Footnotes

Supplementary data and figures for this paper are available from the IUCr electronic archives (Reference: RZ2613).

References

  1. Ali, H. M., Khamis, N. A. & Yamin, B. M. (2004). Acta Cryst. E60, m1708–m1709.
  2. Bruker (1996). SMART and SAINT Bruker AXS Inc., Madison, Wisconsin, USA.
  3. Carcelli, M., Mazza, P., Pelizzi, G. & Zani, F. (1995). J. Inorg. Biochem. 57, 43–62. [DOI] [PubMed]
  4. Cheng, P., Liao, D.-Z., Yan, S.-P., Jiang, Z.-H., Wang, G.-L., Yao, X.-K. & Wang, H.-G. (1996). Inorg. Chim. Acta, 248, 135–137.
  5. Sheldrick, G. M. (1996). SADABS University of Göttingen, Germany.
  6. Sheldrick, G. M. (2008). Acta Cryst. A64, 112–122. [DOI] [PubMed]
  7. Zhang, J.-M., Wang, L., Liu, J., Li, Y.-C. & Li, H.-J. (2011). Acta Cryst. E67, m537.

Associated Data

This section collects any data citations, data availability statements, or supplementary materials included in this article.

Supplementary Materials

Crystal structure: contains datablock(s) I, global. DOI: 10.1107/S1600536811024214/rz2613sup1.cif

e-67-0m978-sup1.cif (19.3KB, cif)

Structure factors: contains datablock(s) I. DOI: 10.1107/S1600536811024214/rz2613Isup2.hkl

e-67-0m978-Isup2.hkl (123.6KB, hkl)

Additional supplementary materials: crystallographic information; 3D view; checkCIF report


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