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Acta Crystallographica Section E: Structure Reports Online logoLink to Acta Crystallographica Section E: Structure Reports Online
. 2011 Jun 30;67(Pt 7):o1863. doi: 10.1107/S1600536811024974

(Z)-Ethyl 2-benzyl­idene-3-oxobutano­ate

Arif I Ismiyev a,*
PMCID: PMC3152122  PMID: 21837227

Abstract

The title mol­ecule, C13H14O3, adopts a Z conformation about the C=C double bond. In the crystal, weak inter­molecular C—H⋯O hydrogen bonds with phenyl –CH atoms functioning as donors and the carbonyl O atom of an ester group as acceptor are observed.

Related literature

For applications of β-keto ester derivatives, see: Benetti et al. (1995); Simon et al. (2004).graphic file with name e-67-o1863-scheme1.jpg

Experimental

Crystal data

  • C13H14O3

  • M r = 218.24

  • Orthorhombic, Inline graphic

  • a = 7.8406 (5) Å

  • b = 16.8767 (12) Å

  • c = 17.5420 (13) Å

  • V = 2321.2 (3) Å3

  • Z = 8

  • Mo Kα radiation

  • μ = 0.09 mm−1

  • T = 296 K

  • 0.03 × 0.03 × 0.02 mm

Data collection

  • Bruker APEXII CCD diffractometer

  • Absorption correction: multi-scan (SADABS; Sheldrick, 1998) T min = 0.997, T max = 0.998

  • 17709 measured reflections

  • 2515 independent reflections

  • 1459 reflections with I > 2σ(I)

  • R int = 0.073

Refinement

  • R[F 2 > 2σ(F 2)] = 0.053

  • wR(F 2) = 0.125

  • S = 1.00

  • 2515 reflections

  • 147 parameters

  • H-atom parameters constrained

  • Δρmax = 0.18 e Å−3

  • Δρmin = −0.17 e Å−3

Data collection: APEX2 (Bruker, 2005); cell refinement: SAINT-Plus (Bruker, 2001); data reduction: SAINT-Plus; program(s) used to solve structure: SHELXTL (Sheldrick, 2008); program(s) used to refine structure: SHELXTL; molecular graphics: SHELXTL; software used to prepare material for publication: SHELXTL.

Supplementary Material

Crystal structure: contains datablock(s) global, I. DOI: 10.1107/S1600536811024974/kp2335sup1.cif

e-67-o1863-sup1.cif (15.7KB, cif)

Structure factors: contains datablock(s) I. DOI: 10.1107/S1600536811024974/kp2335Isup2.hkl

e-67-o1863-Isup2.hkl (123.6KB, hkl)

Supplementary material file. DOI: 10.1107/S1600536811024974/kp2335Isup3.cml

Additional supplementary materials: crystallographic information; 3D view; checkCIF report

Table 1. Hydrogen-bond geometry (Å, °).

D—H⋯A D—H H⋯A DA D—H⋯A
C4—H4A⋯O2 0.93 2.62 3.544 (3) 170
C5—H5A⋯O2 0.93 2.65 3.412 (3) 140

Acknowledgments

The author thanks Professor Victor N. Khrustalev for fruitful discussions and help in this work.

supplementary crystallographic information

Comment

β-Keto ester derivatives, as important synthetic intermediates, are widely applied in the synthesis of new heterocyclic derivatives presenting new pharmacological properties (Benetti et al., 1995; Simon et al., 2004). The molecular structure of the title compound adopts a Z-conformation at the carbon-carbon double bond (Fig. 1). The molecules are connected mainly by intermolecular C—H···O interactions (Table 1).

Experimental

Benzaldehyde (20 mmol) and acetoacetic ester (20 mmol) were dissolved in 20 mL ethanol. After adding 0.50 mL piperidine mixture was stirred at room tempertue for 10 h. White crystals were obtained. The crystals were filtered off and washed with ethanol. Then they were dissolved in ethanol (20 mL) and recrystallised to yield colourless block-shaped crystals of the title compound.

Refinement

All H atoms were positioned geometrically (C—H = 0.93–0.97 Å) and refined as riding, allowing for free rotation of the methyl groups. The constraint Uiso(H) = 1.2 Ueq(C) or 1.5 Ueq(C) (methyl C) was applied.

Figures

Fig. 1.

Fig. 1.

The molecular structure of the title compound, with the atomic numbering scheme. Displacement ellipsoids were drawn at the 30% probability level.

Crystal data

C13H14O3 F(000) = 928
Mr = 218.24 Dx = 1.249 Mg m3
Orthorhombic, Pbca Mo Kα radiation, λ = 0.71073 Å
Hall symbol: -P 2ac 2ab Cell parameters from 1409 reflections
a = 7.8406 (5) Å θ = 2.3–21.4°
b = 16.8767 (12) Å µ = 0.09 mm1
c = 17.5420 (13) Å T = 296 K
V = 2321.2 (3) Å3 Prism, colourless
Z = 8 0.03 × 0.03 × 0.02 mm

Data collection

Bruker APEXII CCD diffractometer 2515 independent reflections
Radiation source: fine-focus sealed tube 1459 reflections with I > 2σ(I)
graphite Rint = 0.073
phi and ω scans θmax = 27.0°, θmin = 2.3°
Absorption correction: multi-scan (SADABS; Sheldrick, 1998) h = −10→10
Tmin = 0.997, Tmax = 0.998 k = −21→21
17709 measured reflections l = −22→22

Refinement

Refinement on F2 Primary atom site location: structure-invariant direct methods
Least-squares matrix: full Secondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.053 Hydrogen site location: difference Fourier map
wR(F2) = 0.125 H-atom parameters constrained
S = 1.00 w = 1/[σ2(Fo2) + (0.0409P)2 + 0.8814P] where P = (Fo2 + 2Fc2)/3
2515 reflections (Δ/σ)max < 0.001
147 parameters Δρmax = 0.18 e Å3
0 restraints Δρmin = −0.17 e Å3

Special details

Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.

Fractional atomic coordinates and isotropic or equivalent isotropic displacement parameters (Å2)

x y z Uiso*/Ueq
O1 0.3871 (2) 0.22540 (10) 0.50159 (10) 0.0679 (5)
O2 0.4542 (2) 0.17527 (10) 0.66960 (9) 0.0577 (5)
O3 0.66163 (18) 0.11601 (9) 0.60314 (8) 0.0488 (4)
C1 0.3604 (3) −0.03682 (12) 0.61668 (12) 0.0416 (5)
C2 0.4421 (3) −0.02544 (14) 0.68650 (12) 0.0511 (6)
H2A 0.4778 0.0251 0.7004 0.061*
C3 0.4706 (3) −0.08813 (15) 0.73500 (14) 0.0599 (7)
H3A 0.5266 −0.0798 0.7810 0.072*
C4 0.4170 (3) −0.16243 (15) 0.71591 (15) 0.0620 (7)
H4A 0.4371 −0.2047 0.7488 0.074*
C5 0.3338 (3) −0.17479 (15) 0.64858 (16) 0.0634 (7)
H5A 0.2960 −0.2254 0.6360 0.076*
C6 0.3056 (3) −0.11284 (14) 0.59944 (14) 0.0510 (6)
H6A 0.2488 −0.1220 0.5538 0.061*
C7 0.3282 (3) 0.02582 (13) 0.56098 (12) 0.0417 (5)
H7A 0.2576 0.0111 0.5208 0.050*
C8 0.3835 (3) 0.10083 (13) 0.55822 (11) 0.0403 (5)
C9 0.5003 (3) 0.13555 (12) 0.61673 (12) 0.0410 (5)
C10 0.7862 (3) 0.14424 (16) 0.65832 (14) 0.0585 (7)
H10A 0.7593 0.1242 0.7087 0.070*
H10B 0.7859 0.2017 0.6601 0.070*
C11 0.9541 (3) 0.11498 (19) 0.63350 (16) 0.0738 (8)
H11A 1.0395 0.1312 0.6695 0.111*
H11B 0.9807 0.1365 0.5842 0.111*
H11C 0.9518 0.0582 0.6306 0.111*
C12 0.3325 (3) 0.15853 (15) 0.49856 (13) 0.0485 (6)
C13 0.2141 (3) 0.13393 (17) 0.43558 (14) 0.0677 (8)
H13A 0.1707 0.1802 0.4103 0.102*
H13B 0.1209 0.1041 0.4565 0.102*
H13C 0.2749 0.1017 0.3996 0.102*

Atomic displacement parameters (Å2)

U11 U22 U33 U12 U13 U23
O1 0.0888 (13) 0.0502 (11) 0.0645 (11) 0.0025 (10) −0.0006 (10) 0.0121 (9)
O2 0.0627 (11) 0.0574 (10) 0.0530 (10) 0.0107 (8) 0.0007 (8) −0.0164 (8)
O3 0.0411 (8) 0.0639 (10) 0.0414 (9) 0.0030 (7) −0.0003 (7) −0.0061 (7)
C1 0.0414 (11) 0.0441 (13) 0.0392 (12) 0.0014 (10) 0.0031 (9) −0.0016 (10)
C2 0.0671 (15) 0.0430 (13) 0.0433 (13) −0.0046 (11) −0.0060 (11) 0.0027 (11)
C3 0.0719 (17) 0.0594 (16) 0.0484 (15) −0.0003 (13) −0.0031 (13) 0.0102 (12)
C4 0.0742 (17) 0.0507 (15) 0.0609 (16) 0.0039 (13) 0.0113 (14) 0.0130 (13)
C5 0.0754 (18) 0.0447 (14) 0.0702 (18) −0.0076 (13) 0.0139 (15) −0.0028 (13)
C6 0.0534 (14) 0.0493 (14) 0.0501 (14) −0.0056 (11) 0.0029 (11) −0.0042 (12)
C7 0.0407 (11) 0.0483 (13) 0.0359 (11) 0.0035 (10) −0.0023 (9) −0.0031 (10)
C8 0.0379 (11) 0.0484 (13) 0.0347 (11) 0.0081 (10) 0.0010 (9) −0.0003 (10)
C9 0.0455 (12) 0.0388 (11) 0.0386 (12) 0.0037 (10) 0.0046 (10) 0.0029 (10)
C10 0.0505 (14) 0.0740 (18) 0.0510 (14) −0.0034 (13) −0.0098 (11) −0.0061 (13)
C11 0.0472 (15) 0.106 (2) 0.0685 (17) 0.0017 (15) −0.0065 (13) 0.0004 (16)
C12 0.0501 (13) 0.0554 (15) 0.0401 (13) 0.0112 (12) 0.0055 (11) 0.0027 (11)
C13 0.0714 (18) 0.0825 (19) 0.0492 (14) 0.0105 (15) −0.0126 (13) 0.0149 (14)

Geometric parameters (Å, °)

O1—C12 1.208 (3) C6—H6A 0.9300
O2—C9 1.200 (2) C7—C8 1.339 (3)
O3—C9 1.329 (2) C7—H7A 0.9300
O3—C10 1.455 (3) C8—C12 1.484 (3)
C1—C6 1.386 (3) C8—C9 1.495 (3)
C1—C2 1.395 (3) C10—C11 1.472 (3)
C1—C7 1.462 (3) C10—H10A 0.9700
C2—C3 1.376 (3) C10—H10B 0.9700
C2—H2A 0.9300 C11—H11A 0.9600
C3—C4 1.364 (4) C11—H11B 0.9600
C3—H3A 0.9300 C11—H11C 0.9600
C4—C5 1.365 (4) C12—C13 1.502 (3)
C4—H4A 0.9300 C13—H13A 0.9600
C5—C6 1.373 (3) C13—H13B 0.9600
C5—H5A 0.9300 C13—H13C 0.9600
C9—O3—C10 116.00 (17) O2—C9—O3 124.3 (2)
C6—C1—C2 117.5 (2) O2—C9—C8 124.4 (2)
C6—C1—C7 118.0 (2) O3—C9—C8 111.27 (18)
C2—C1—C7 124.5 (2) O3—C10—C11 107.1 (2)
C3—C2—C1 120.8 (2) O3—C10—H10A 110.3
C3—C2—H2A 119.6 C11—C10—H10A 110.3
C1—C2—H2A 119.6 O3—C10—H10B 110.3
C4—C3—C2 120.3 (2) C11—C10—H10B 110.3
C4—C3—H3A 119.8 H10A—C10—H10B 108.6
C2—C3—H3A 119.8 C10—C11—H11A 109.5
C3—C4—C5 120.0 (2) C10—C11—H11B 109.5
C3—C4—H4A 120.0 H11A—C11—H11B 109.5
C5—C4—H4A 120.0 C10—C11—H11C 109.5
C4—C5—C6 120.2 (2) H11A—C11—H11C 109.5
C4—C5—H5A 119.9 H11B—C11—H11C 109.5
C6—C5—H5A 119.9 O1—C12—C8 119.1 (2)
C5—C6—C1 121.2 (2) O1—C12—C13 120.7 (2)
C5—C6—H6A 119.4 C8—C12—C13 120.3 (2)
C1—C6—H6A 119.4 C12—C13—H13A 109.5
C8—C7—C1 130.7 (2) C12—C13—H13B 109.5
C8—C7—H7A 114.6 H13A—C13—H13B 109.5
C1—C7—H7A 114.6 C12—C13—H13C 109.5
C7—C8—C12 124.0 (2) H13A—C13—H13C 109.5
C7—C8—C9 122.95 (19) H13B—C13—H13C 109.5
C12—C8—C9 113.07 (19)
C6—C1—C2—C3 1.7 (3) C10—O3—C9—O2 1.5 (3)
C7—C1—C2—C3 −178.6 (2) C10—O3—C9—C8 −177.80 (18)
C1—C2—C3—C4 −0.9 (4) C7—C8—C9—O2 −97.9 (3)
C2—C3—C4—C5 −0.4 (4) C12—C8—C9—O2 80.6 (3)
C3—C4—C5—C6 0.8 (4) C7—C8—C9—O3 81.4 (2)
C4—C5—C6—C1 0.0 (4) C12—C8—C9—O3 −100.1 (2)
C2—C1—C6—C5 −1.2 (3) C9—O3—C10—C11 178.9 (2)
C7—C1—C6—C5 179.0 (2) C7—C8—C12—O1 178.8 (2)
C6—C1—C7—C8 −171.0 (2) C9—C8—C12—O1 0.3 (3)
C2—C1—C7—C8 9.3 (4) C7—C8—C12—C13 −0.9 (3)
C1—C7—C8—C12 −177.4 (2) C9—C8—C12—C13 −179.4 (2)
C1—C7—C8—C9 1.0 (4)

Hydrogen-bond geometry (Å, °)

D—H···A D—H H···A D···A D—H···A
C4—H4A···O2i 0.93 2.62 3.544 (3) 170
C5—H5A···O2ii 0.93 2.65 3.412 (3) 140

Symmetry codes: (i) ; (ii) .

Footnotes

Supplementary data and figures for this paper are available from the IUCr electronic archives (Reference: KP2335).

References

  1. Benetti, S., Romagnoli, R., Risi, C. D., Spalluto, G. & Zanirato, V. (1995). Chem. Rev. 95, 1065–1114.
  2. Bruker (2001). SAINT-Plus Bruke AXS Inc., Madison, Wisconsin, USA.
  3. Bruker (2005). APEX2 Bruker AXS Inc., Madison, Wisconsin, USA.
  4. Sheldrick, G. M. (1998). SADABS University of Göttingen, Germany.
  5. Sheldrick, G. M. (2008). Acta Cryst. A64, 112–122. [DOI] [PubMed]
  6. Simon, C., Constantieux, T. & Rodriguez, J. (2004). Eur. J. Org. Chem. pp. 4957–4980.

Associated Data

This section collects any data citations, data availability statements, or supplementary materials included in this article.

Supplementary Materials

Crystal structure: contains datablock(s) global, I. DOI: 10.1107/S1600536811024974/kp2335sup1.cif

e-67-o1863-sup1.cif (15.7KB, cif)

Structure factors: contains datablock(s) I. DOI: 10.1107/S1600536811024974/kp2335Isup2.hkl

e-67-o1863-Isup2.hkl (123.6KB, hkl)

Supplementary material file. DOI: 10.1107/S1600536811024974/kp2335Isup3.cml

Additional supplementary materials: crystallographic information; 3D view; checkCIF report


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