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Acta Crystallographica Section E: Structure Reports Online logoLink to Acta Crystallographica Section E: Structure Reports Online
. 2011 Jun 18;67(Pt 7):o1693. doi: 10.1107/S1600536811022112

3-(2-Amino­phenyl­sulfanyl)-1,3-diphenyl­propan-1-one

Marzieh Yaeghoobi a, Hamid Khaledi a,*, Zanariah Abdullah a, Noorsaadah AbdRahman a
PMCID: PMC3152142  PMID: 21837090

Abstract

In the title compound, C21H19NOS, the three aromatic rings are not coplanar, the dihedral angles between them being 84.75 (7), 88.01 (8) and 8.36 (16)°. In the crystal, two types of C—H⋯ π inter­actions, one of which is weak, and N—H⋯π inter­actions link the mol­ecules into layers parallel to the ab plane.

Related literature

For a similar structure, see: Morgant et al. (1996).graphic file with name e-67-o1693-scheme1.jpg

Experimental

Crystal data

  • C21H19NOS

  • M r = 333.43

  • Monoclinic, Inline graphic

  • a = 11.1741 (16) Å

  • b = 5.6788 (8) Å

  • c = 27.308 (4) Å

  • β = 95.266 (2)°

  • V = 1725.5 (4) Å3

  • Z = 4

  • Mo Kα radiation

  • μ = 0.19 mm−1

  • T = 296 K

  • 0.18 × 0.07 × 0.02 mm

Data collection

  • Bruker APEX-II CCD diffractometer

  • Absorption correction: multi-scan (SADABS; Sheldrick, 1996) T min = 0.966, T max = 0.996

  • 7303 measured reflections

  • 3195 independent reflections

  • 1784 reflections with I > 2σ(I)

  • R int = 0.065

Refinement

  • R[F 2 > 2σ(F 2)] = 0.057

  • wR(F 2) = 0.101

  • S = 0.95

  • 3195 reflections

  • 223 parameters

  • H atoms treated by a mixture of independent and constrained refinement

  • Δρmax = 0.17 e Å−3

  • Δρmin = −0.23 e Å−3

Data collection: APEX2 (Bruker, 2007); cell refinement: SAINT (Bruker, 2007); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: X-SEED (Barbour, 2001); software used to prepare material for publication: SHELXL97 and publCIF (Westrip, 2010).

Supplementary Material

Crystal structure: contains datablock(s) I, New_Global_Publ_Block. DOI: 10.1107/S1600536811022112/go2015sup1.cif

e-67-o1693-sup1.cif (17.4KB, cif)

Structure factors: contains datablock(s) I. DOI: 10.1107/S1600536811022112/go2015Isup2.hkl

e-67-o1693-Isup2.hkl (156.8KB, hkl)

Additional supplementary materials: crystallographic information; 3D view; checkCIF report

Table 1. Hydrogen-bond geometry (Å, °).

Cg1 and Cg2 are the centroids of the C10–C15 and C16–C21 rings, respectively.

D—H⋯A D—H H⋯A DA D—H⋯A
N1—H1BCg1i 0.91 (3) 2.55 (3) 3.400 (3) 155 (2)
C12—H12⋯Cg1ii 0.93 2.86 3.581 (4) 135
C14—H14⋯Cg2i 0.93 2.93 3.587 (3) 128

Symmetry codes: (i) Inline graphic; (ii) Inline graphic.

Acknowledgments

The authors would like to thank the Ministry of Science, Technology and Innovation (MOSTI) for funding this study (Science fund grant No. 53–02-03–1059).

supplementary crystallographic information

Comment

The title compound (Fig. 1) was obtained during the synthesis of benzothiazepines II in an ionic liquid media (Fig. 2) and is suggested to be the intermediate compound which upon subsequent cyclization would form the seven-membered thiazepine ring. The three aromatic rings of the molecule are non-planar as are in the structure of a related compound (Morgant et al., 1996). The dihedral angles between the phenyl rings plane are 84.75 (7)° (between C1/C6 and C10/C15), 88.01 (8) ° (between C1/C6 and C16/C21) and 8.36 (16) ° (between C10/C15 and C16/C21). The amino hydrogen, H1B, is involved in an N—H··· π interaction (Table 1). In the crystal, the N—H···π interactions connect the adjacent molecules into infinite chains along the b axis. The one-dimensional link is supplemented by weak C14—H14··· π interactions. The chains are connected into two-dimensional-arrays parallel to the ab plane via C12—H12··· π interactions (Table 1).

Experimental

The title compound was synthesized as illustrated in Fig. 2. A mixture of the chalcone (0.208 g, 1 mmol), o-aminothiophenol (0.088 ml, 1.1 mmol) and ionic liquid, IL, (0.1 g) was heated at 80°C for 80 min. The two products, I & II, were extracted with diethyether and separated by column chromatography (hexane: ethylacatate, 8:2). The second fraction, containing (I), was evaporated and the resulting solid was recrystallized from ethanol at room temperature to give the colorless crystals of the title compound.

Refinement

The C-bound hydrogen atoms were placed at calculated positions and refined as riding atoms with C—H distances of 0.93 (phenyl), 0.97 (methylene) and 0.98 (methine) Å. The N-bound hydrogen atoms were located in a difference Fourier map and refined freely. For all hydrogen atoms Uiso(H) were set to1.2 Ueq(carrier atom).

Figures

Fig. 1.

Fig. 1.

The molecular structure of the title compound with displacement ellipsoids drawn at 30% probability level. Hydrogen atoms are drawn as spheres of arbitrary radius.

Fig. 2.

Fig. 2.

Synthetic route to compounds I and II.

Crystal data

C21H19NOS F(000) = 704
Mr = 333.43 Dx = 1.284 Mg m3
Monoclinic, P21/n Mo Kα radiation, λ = 0.71073 Å
Hall symbol: -P 2yn Cell parameters from 713 reflections
a = 11.1741 (16) Å θ = 3.0–20.6°
b = 5.6788 (8) Å µ = 0.19 mm1
c = 27.308 (4) Å T = 296 K
β = 95.266 (2)° Lath, colorless
V = 1725.5 (4) Å3 0.18 × 0.07 × 0.02 mm
Z = 4

Data collection

Bruker APEX-II CCD diffractometer 3195 independent reflections
Radiation source: fine-focus sealed tube 1784 reflections with I > 2σ(I)
graphite Rint = 0.065
φ and ω scans θmax = 25.5°, θmin = 2.0°
Absorption correction: multi-scan (SADABS; Sheldrick, 1996) h = −12→13
Tmin = 0.966, Tmax = 0.996 k = −6→5
7303 measured reflections l = −29→33

Refinement

Refinement on F2 Primary atom site location: structure-invariant direct methods
Least-squares matrix: full Secondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.057 Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.101 H atoms treated by a mixture of independent and constrained refinement
S = 0.95 w = 1/[σ2(Fo2) + (0.0336P)2] where P = (Fo2 + 2Fc2)/3
3195 reflections (Δ/σ)max < 0.001
223 parameters Δρmax = 0.17 e Å3
0 restraints Δρmin = −0.23 e Å3

Special details

Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.

Fractional atomic coordinates and isotropic or equivalent isotropic displacement parameters (Å2)

x y z Uiso*/Ueq
S1 0.80339 (6) 0.87951 (14) 0.18814 (3) 0.0447 (2)
O1 1.0501 (2) 0.3126 (4) 0.13496 (8) 0.0647 (7)
N1 0.6375 (2) 0.4530 (5) 0.18086 (10) 0.0544 (8)
H1A 0.684 (3) 0.492 (5) 0.2078 (11) 0.065*
H1B 0.576 (3) 0.353 (5) 0.1859 (10) 0.065*
C1 1.0977 (3) 0.7137 (6) 0.03620 (11) 0.0486 (8)
H1 1.0485 0.8384 0.0436 0.058*
C2 1.1576 (3) 0.7203 (6) −0.00593 (11) 0.0583 (9)
H2 1.1483 0.8497 −0.0268 0.070*
C3 1.2307 (3) 0.5382 (7) −0.01713 (11) 0.0576 (10)
H3 1.2698 0.5429 −0.0457 0.069*
C4 1.2458 (3) 0.3503 (6) 0.01372 (11) 0.0567 (9)
H4 1.2970 0.2285 0.0065 0.068*
C5 1.1859 (2) 0.3390 (5) 0.05554 (10) 0.0479 (8)
H5 1.1957 0.2084 0.0761 0.057*
C6 1.1110 (2) 0.5215 (5) 0.06716 (10) 0.0372 (7)
C7 1.0446 (3) 0.4961 (6) 0.11240 (11) 0.0421 (8)
C8 0.9699 (2) 0.7008 (5) 0.12804 (9) 0.0407 (8)
H8A 0.9049 0.7301 0.1027 0.049*
H8B 1.0198 0.8409 0.1310 0.049*
C9 0.9174 (2) 0.6565 (5) 0.17669 (9) 0.0389 (7)
H9 0.8789 0.5013 0.1753 0.047*
C10 1.0071 (2) 0.6649 (5) 0.22161 (9) 0.0330 (7)
C11 1.0841 (2) 0.8534 (5) 0.23096 (10) 0.0397 (7)
H11 1.0841 0.9755 0.2083 0.048*
C12 1.1609 (2) 0.8630 (6) 0.27341 (11) 0.0484 (8)
H12 1.2120 0.9912 0.2792 0.058*
C13 1.1620 (3) 0.6835 (6) 0.30718 (11) 0.0511 (9)
H13 1.2142 0.6889 0.3357 0.061*
C14 1.0852 (3) 0.4954 (6) 0.29848 (11) 0.0502 (9)
H14 1.0850 0.3743 0.3214 0.060*
C15 1.0089 (2) 0.4857 (5) 0.25623 (10) 0.0436 (8)
H15 0.9577 0.3574 0.2507 0.052*
C16 0.6144 (2) 0.6174 (5) 0.14430 (10) 0.0378 (7)
C17 0.5196 (3) 0.5843 (6) 0.10811 (11) 0.0507 (9)
H17 0.4728 0.4490 0.1084 0.061*
C18 0.4949 (3) 0.7500 (7) 0.07200 (11) 0.0577 (9)
H18 0.4307 0.7263 0.0483 0.069*
C19 0.5635 (3) 0.9510 (6) 0.07023 (11) 0.0559 (9)
H19 0.5454 1.0636 0.0460 0.067*
C20 0.6588 (3) 0.9817 (6) 0.10486 (10) 0.0465 (8)
H20 0.7062 1.1157 0.1035 0.056*
C21 0.6864 (2) 0.8180 (5) 0.14189 (9) 0.0338 (7)

Atomic displacement parameters (Å2)

U11 U22 U33 U12 U13 U23
S1 0.0366 (4) 0.0552 (6) 0.0419 (5) 0.0055 (4) 0.0013 (3) −0.0142 (4)
O1 0.0848 (17) 0.0482 (16) 0.0659 (16) 0.0140 (14) 0.0324 (13) 0.0095 (12)
N1 0.0539 (18) 0.055 (2) 0.0551 (19) −0.0092 (15) 0.0070 (14) 0.0093 (15)
C1 0.0494 (19) 0.046 (2) 0.051 (2) 0.0072 (17) 0.0098 (16) −0.0029 (16)
C2 0.066 (2) 0.062 (3) 0.049 (2) −0.007 (2) 0.0129 (18) 0.0073 (17)
C3 0.056 (2) 0.076 (3) 0.043 (2) −0.011 (2) 0.0160 (17) −0.011 (2)
C4 0.054 (2) 0.064 (3) 0.054 (2) 0.005 (2) 0.0158 (17) −0.0135 (19)
C5 0.0485 (18) 0.048 (2) 0.0475 (19) 0.0047 (17) 0.0076 (15) −0.0042 (15)
C6 0.0360 (16) 0.041 (2) 0.0340 (17) −0.0026 (16) 0.0022 (13) −0.0057 (15)
C7 0.0443 (18) 0.041 (2) 0.0407 (19) 0.0012 (17) 0.0034 (14) −0.0034 (16)
C8 0.0407 (17) 0.045 (2) 0.0359 (17) 0.0067 (16) 0.0029 (14) −0.0011 (14)
C9 0.0352 (16) 0.0400 (19) 0.0422 (18) 0.0033 (15) 0.0077 (14) −0.0058 (14)
C10 0.0278 (15) 0.039 (2) 0.0333 (17) −0.0005 (15) 0.0076 (12) −0.0016 (14)
C11 0.0399 (17) 0.040 (2) 0.0396 (18) 0.0015 (17) 0.0046 (14) 0.0029 (14)
C12 0.0359 (17) 0.055 (2) 0.054 (2) −0.0087 (17) 0.0011 (15) −0.0067 (18)
C13 0.0375 (18) 0.080 (3) 0.0357 (18) 0.0085 (19) 0.0028 (15) −0.0006 (19)
C14 0.0458 (19) 0.060 (2) 0.046 (2) 0.0026 (18) 0.0103 (16) 0.0154 (16)
C15 0.0386 (17) 0.043 (2) 0.050 (2) −0.0052 (16) 0.0071 (16) 0.0022 (16)
C16 0.0350 (16) 0.045 (2) 0.0346 (17) 0.0033 (17) 0.0080 (14) −0.0009 (15)
C17 0.0433 (18) 0.059 (2) 0.050 (2) −0.0076 (18) 0.0053 (16) −0.0097 (18)
C18 0.047 (2) 0.081 (3) 0.043 (2) 0.003 (2) −0.0101 (16) −0.0156 (19)
C19 0.062 (2) 0.066 (3) 0.039 (2) 0.015 (2) 0.0013 (17) 0.0046 (16)
C20 0.0484 (19) 0.049 (2) 0.0423 (19) 0.0011 (17) 0.0056 (16) 0.0006 (16)
C21 0.0306 (15) 0.0382 (19) 0.0334 (17) 0.0019 (15) 0.0069 (13) −0.0054 (14)

Geometric parameters (Å, °)

S1—C21 1.767 (3) C9—H9 0.9800
S1—C9 1.843 (3) C10—C11 1.382 (3)
O1—C7 1.209 (3) C10—C15 1.388 (4)
N1—C16 1.374 (4) C11—C12 1.379 (4)
N1—H1A 0.89 (3) C11—H11 0.9300
N1—H1B 0.91 (3) C12—C13 1.374 (4)
C1—C6 1.380 (4) C12—H12 0.9300
C1—C2 1.384 (4) C13—C14 1.377 (4)
C1—H1 0.9300 C13—H13 0.9300
C2—C3 1.370 (4) C14—C15 1.371 (4)
C2—H2 0.9300 C14—H14 0.9300
C3—C4 1.360 (4) C15—H15 0.9300
C3—H3 0.9300 C16—C17 1.393 (4)
C4—C5 1.377 (4) C16—C21 1.400 (4)
C4—H4 0.9300 C17—C18 1.373 (4)
C5—C6 1.387 (4) C17—H17 0.9300
C5—H5 0.9300 C18—C19 1.378 (4)
C6—C7 1.505 (4) C18—H18 0.9300
C7—C8 1.515 (4) C19—C20 1.369 (4)
C8—C9 1.522 (3) C19—H19 0.9300
C8—H8A 0.9700 C20—C21 1.387 (4)
C8—H8B 0.9700 C20—H20 0.9300
C9—C10 1.512 (3)
C21—S1—C9 102.73 (12) C11—C10—C15 118.2 (3)
C16—N1—H1A 119 (2) C11—C10—C9 121.9 (2)
C16—N1—H1B 116.2 (19) C15—C10—C9 119.8 (3)
H1A—N1—H1B 115 (3) C12—C11—C10 121.0 (3)
C6—C1—C2 119.8 (3) C12—C11—H11 119.5
C6—C1—H1 120.1 C10—C11—H11 119.5
C2—C1—H1 120.1 C13—C12—C11 120.1 (3)
C3—C2—C1 120.6 (3) C13—C12—H12 120.0
C3—C2—H2 119.7 C11—C12—H12 120.0
C1—C2—H2 119.7 C12—C13—C14 119.5 (3)
C4—C3—C2 119.8 (3) C12—C13—H13 120.2
C4—C3—H3 120.1 C14—C13—H13 120.2
C2—C3—H3 120.1 C15—C14—C13 120.4 (3)
C3—C4—C5 120.5 (3) C15—C14—H14 119.8
C3—C4—H4 119.7 C13—C14—H14 119.8
C5—C4—H4 119.7 C14—C15—C10 120.8 (3)
C4—C5—C6 120.3 (3) C14—C15—H15 119.6
C4—C5—H5 119.9 C10—C15—H15 119.6
C6—C5—H5 119.9 N1—C16—C17 120.2 (3)
C1—C6—C5 118.9 (3) N1—C16—C21 121.1 (3)
C1—C6—C7 123.0 (3) C17—C16—C21 118.7 (3)
C5—C6—C7 118.0 (3) C18—C17—C16 120.5 (3)
O1—C7—C6 119.7 (3) C18—C17—H17 119.8
O1—C7—C8 121.4 (3) C16—C17—H17 119.8
C6—C7—C8 118.9 (3) C17—C18—C19 121.1 (3)
C7—C8—C9 112.7 (2) C17—C18—H18 119.4
C7—C8—H8A 109.1 C19—C18—H18 119.4
C9—C8—H8A 109.1 C20—C19—C18 118.8 (3)
C7—C8—H8B 109.1 C20—C19—H19 120.6
C9—C8—H8B 109.1 C18—C19—H19 120.6
H8A—C8—H8B 107.8 C19—C20—C21 121.7 (3)
C10—C9—C8 115.0 (2) C19—C20—H20 119.1
C10—C9—S1 104.94 (17) C21—C20—H20 119.1
C8—C9—S1 111.25 (19) C20—C21—C16 119.3 (3)
C10—C9—H9 108.5 C20—C21—S1 119.3 (2)
C8—C9—H9 108.5 C16—C21—S1 121.2 (2)
S1—C9—H9 108.5

Hydrogen-bond geometry (Å, °)

Cg1 and Cg2 are the centroids of the C10–C15 and C16–C21 rings, respectively.
D—H···A D—H H···A D···A D—H···A
N1—H1B···Cg1i 0.91 (3) 2.55 (3) 3.400 (3) 155 (2)
C12—H12···Cg1ii 0.93 2.86 3.581 (4) 135
C14—H14···Cg2i 0.93 2.93 3.587 (3) 128

Symmetry codes: (i) −x+3/2, y−1/2, −z+1/2; (ii) −x+5/2, y+1/2, −z+1/2.

Footnotes

Supplementary data and figures for this paper are available from the IUCr electronic archives (Reference: GO2015).

References

  1. Barbour, L. J. (2001). J. Supramol. Chem, 1, 189–191.
  2. Bruker (2007). APEX2 and SAINT Bruker AXS Inc., Madison, Wisconsin, USA.
  3. Morgant, G., Labouze, X., Viossat, B., Lancelot, J.-C. & Nguyen Huy Dung (1996). Acta Cryst. C52, 923–925.
  4. Sheldrick, G. M. (1996). SADABS University of Göttingen, Germany.
  5. Sheldrick, G. M. (2008). Acta Cryst. A64, 112–122. [DOI] [PubMed]
  6. Westrip, S. P. (2010). J. Appl. Cryst. 43, 920–925.

Associated Data

This section collects any data citations, data availability statements, or supplementary materials included in this article.

Supplementary Materials

Crystal structure: contains datablock(s) I, New_Global_Publ_Block. DOI: 10.1107/S1600536811022112/go2015sup1.cif

e-67-o1693-sup1.cif (17.4KB, cif)

Structure factors: contains datablock(s) I. DOI: 10.1107/S1600536811022112/go2015Isup2.hkl

e-67-o1693-Isup2.hkl (156.8KB, hkl)

Additional supplementary materials: crystallographic information; 3D view; checkCIF report


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