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Acta Crystallographica Section E: Structure Reports Online logoLink to Acta Crystallographica Section E: Structure Reports Online
. 2011 Aug 27;67(Pt 9):o2416. doi: 10.1107/S1600536811033940

Ethyl 5-methyl-1-(4-nitro­phen­yl)-1H-1,2,3-triazole-4-carboxyl­ate

Hoong-Kun Fun a,*,, Ching Kheng Quah a,§, Nithinchandra b, Balakrishna Kalluraya b
PMCID: PMC3200591  PMID: 22059001

Abstract

In the title compound, C12H12N4O4, the 1,2,3-triazole ring and the nitro group form dihedral angles of 37.93 (5) and 8.97 (12)°, respectively, with the phenyl ring. The mol­ecular structure is stabilized by an intra­molecular C—H⋯O hydrogen bond, which generates an S(6) ring motif. In the crystal, mol­ecules are linked by C—H⋯N hydrogen bonds into layers lying parallel to (100). The crystal structure is further consolidated by π–π [centroid–centroid distance = 3.6059 (6) Å] inter­actions.

Related literature

For general background to and the biological activity of 1,2,3-triazole derivatives, see: Sherement et al. (2004); Danoun et al. (1998); Manfredini et al. (2000); Biagi et al. (2004). For standard bond-length data, see: Allen et al. (1987). For hydrogen-bond motifs, see: Bernstein et al. (1995). For the stability of the temperature controller used for the data collection, see: Cosier & Glazer (1986). For related structures, see: Fun, Quah, Chandrakantha et al. (2011); Fun, Quah, Nithinchandra et al. (2011).graphic file with name e-67-o2416-scheme1.jpg

Experimental

Crystal data

  • C12H12N4O4

  • M r = 276.26

  • Monoclinic, Inline graphic

  • a = 13.5309 (3) Å

  • b = 7.3014 (2) Å

  • c = 12.6058 (3) Å

  • β = 99.574 (1)°

  • V = 1228.04 (5) Å3

  • Z = 4

  • Mo Kα radiation

  • μ = 0.12 mm−1

  • T = 100 K

  • 0.50 × 0.16 × 0.16 mm

Data collection

  • Bruker SMART APEXII CCD diffractometer

  • Absorption correction: multi-scan (SADABS; Bruker, 2009) T min = 0.944, T max = 0.982

  • 16800 measured reflections

  • 4469 independent reflections

  • 3699 reflections with I > 2σ(I)

  • R int = 0.021

Refinement

  • R[F 2 > 2σ(F 2)] = 0.040

  • wR(F 2) = 0.114

  • S = 1.03

  • 4469 reflections

  • 183 parameters

  • H-atom parameters constrained

  • Δρmax = 0.41 e Å−3

  • Δρmin = −0.30 e Å−3

Data collection: APEX2 (Bruker, 2009); cell refinement: SAINT (Bruker, 2009); data reduction: SAINT; program(s) used to solve structure: SHELXTL (Sheldrick, 2008); program(s) used to refine structure: SHELXTL; molecular graphics: SHELXTL; software used to prepare material for publication: SHELXTL and PLATON (Spek, 2009).

Supplementary Material

Crystal structure: contains datablock(s) global, I. DOI: 10.1107/S1600536811033940/hb6375sup1.cif

e-67-o2416-sup1.cif (17.9KB, cif)

Structure factors: contains datablock(s) I. DOI: 10.1107/S1600536811033940/hb6375Isup2.hkl

e-67-o2416-Isup2.hkl (219KB, hkl)

Supplementary material file. DOI: 10.1107/S1600536811033940/hb6375Isup3.cml

Additional supplementary materials: crystallographic information; 3D view; checkCIF report

Table 1. Hydrogen-bond geometry (Å, °).

D—H⋯A D—H H⋯A DA D—H⋯A
C1—H1A⋯N3i 0.95 2.59 3.5243 (12) 168
C5—H5A⋯N2ii 0.95 2.60 3.2347 (12) 125
C5—H5A⋯N3ii 0.95 2.54 3.4127 (12) 154
C10—H10B⋯O4 0.98 2.48 3.0936 (12) 120

Symmetry codes: (i) Inline graphic; (ii) Inline graphic.

Acknowledgments

HKF and CKQ thank Universiti Sains Malaysia for the Research University Grant (No. 1001/PFIZIK/811160).

supplementary crystallographic information

Comment

1,2,3-Triazole and its derivatives had attracted considerable attention for the past few decades due to their chemotherapeutical value. Many 1,2,3-triazoles are found to be potent antimicrobial (Sherement et al., 2004) and antiviral agents. Some of them have exhibited antiproliferative and anticancer activities (Danoun et al., 1998). Some 1,2,3-triazoles are used as DNA cleaving agents (Manfredini et al., 2000) and potassium channel activators (Biagi et al., 2004). Prompted by the chemotherapeutic importance of 1,2,3-triazoles and its derivatives, we synthesized the title compound.

In the title molecule, Fig. 1, the 1,2,3-triazole ring (N1-N3/C7/C8, maximum deviation of 0.003 (1) Å at atoms N2 and N3) and the nitro group (O2/O3/N4) form dihedral angles of 37.93 (5) and 8.97 (12)°, respectively, with the phenyl ring (C1-C6). Bond lengths (Allen et al., 1987) and angles are within normal ranges and are comparable to related structures (Fun, Quah, Chandrakantha et al., 2011; Fun, Quah, Nithinchandra et al., 2011). The molecular structure is stabilized by an intramolecular C41-H10B···O4 hydrogen bond (Table 1), which generates an S(6) ring motif (Fig. 1, Bernstein et al., 1995).

In the crystal structure, Fig. 2, molecules are linked via intermolecular C1–H1A···N3, C5–H5A···N2 and C5–H5A···N3 hydrogen bonds (Table 1) into two-dimensional planes parallel to (100). π-π stacking interactions between the centroids of C1-C6 phenyl ring (Cg1) and N1-N3/C7/C8 triazole ring (Cg2), with Cg1···Cg2iii distance of 3.6059 (6) Å [symmetry code: (iii) 1-X,-1/2+Y,1/2-Z] are observed.

Experimental

1-Azido-4-nitrobenzene (15 g) was treated with ethyl acetoacetate (8.3 g) in methanol (75 ml) and the mixture was cooled to 273 K. Sodium methoxide (3.5 g) was added under inert atmosphere to the above mixture and stirred at ambient temperature for 8 h. Progress of the reaction was monitored by TLC (ethyl acetate/n-hexane, 2:3, v/v). After completion of the reaction, the mixture was poured on to ice cold water. The precipitated solid was filtered, washed with water and recrystallized from methanol. Colourless plates of (I) were obtained from DMF by slow evaporation.

Refinement

All H atoms were positioned geometrically and refined using a riding model with C–H = 0.95-0.99 Å and Uiso(H) = 1.2 or 1.5 Ueq(C). A rotating-group model was applied for the methyl groups.

Figures

Fig. 1.

Fig. 1.

The molecular structure of the title compound showing 50% probability displacement ellipsoids for non-H atoms. The intramolecular hydrogen bond is shown as a dashed line.

Fig. 2.

Fig. 2.

The crystal structure of the title compound, viewed along the b axis. H atoms not involved in hydrogen bonds (dashed lines) have been omitted for clarity.

Crystal data

C12H12N4O4 F(000) = 576
Mr = 276.26 Dx = 1.494 Mg m3
Monoclinic, P21/c Mo Kα radiation, λ = 0.71073 Å
Hall symbol: -P 2ybc Cell parameters from 8459 reflections
a = 13.5309 (3) Å θ = 3.1–32.6°
b = 7.3014 (2) Å µ = 0.12 mm1
c = 12.6058 (3) Å T = 100 K
β = 99.574 (1)° Plate, colourless
V = 1228.04 (5) Å3 0.50 × 0.16 × 0.16 mm
Z = 4

Data collection

Bruker SMART APEXII CCD diffractometer 4469 independent reflections
Radiation source: fine-focus sealed tube 3699 reflections with I > 2σ(I)
graphite Rint = 0.021
φ and ω scans θmax = 32.6°, θmin = 3.1°
Absorption correction: multi-scan (SADABS; Bruker, 2009) h = −20→18
Tmin = 0.944, Tmax = 0.982 k = −11→8
16800 measured reflections l = −19→19

Refinement

Refinement on F2 Primary atom site location: structure-invariant direct methods
Least-squares matrix: full Secondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.040 Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.114 H-atom parameters constrained
S = 1.03 w = 1/[σ2(Fo2) + (0.0579P)2 + 0.3698P] where P = (Fo2 + 2Fc2)/3
4469 reflections (Δ/σ)max = 0.001
183 parameters Δρmax = 0.41 e Å3
0 restraints Δρmin = −0.30 e Å3

Special details

Experimental. The crystal was placed in the cold stream of an Oxford Cryosystems Cobra open-flow nitrogen cryostat (Cosier & Glazer, 1986) operating at 100.0 (1) K.
Geometry. All esds (except the esd in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell esds are taken into account individually in the estimation of esds in distances, angles and torsion angles; correlations between esds in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell esds is used for estimating esds involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > 2sigma(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.

Fractional atomic coordinates and isotropic or equivalent isotropic displacement parameters (Å2)

x y z Uiso*/Ueq
O1 0.17538 (5) 0.16665 (10) −0.05384 (5) 0.01804 (15)
O2 0.81492 (6) 0.19872 (12) 0.56912 (6) 0.02603 (18)
O3 0.88912 (6) 0.04601 (13) 0.45702 (7) 0.02874 (19)
O4 0.14766 (5) 0.02184 (11) 0.09686 (6) 0.02182 (16)
N1 0.45814 (6) 0.12739 (11) 0.18124 (6) 0.01308 (15)
N2 0.46803 (6) 0.17529 (12) 0.07841 (6) 0.01609 (16)
N3 0.37872 (6) 0.17308 (12) 0.02083 (6) 0.01568 (16)
N4 0.81564 (6) 0.12105 (13) 0.48264 (7) 0.01954 (17)
C1 0.63468 (7) 0.05446 (13) 0.22772 (7) 0.01570 (17)
H1A 0.6336 0.0113 0.1564 0.019*
C2 0.72344 (7) 0.05470 (13) 0.30098 (7) 0.01654 (17)
H2A 0.7841 0.0126 0.2807 0.020*
C3 0.72162 (7) 0.11789 (13) 0.40463 (7) 0.01516 (17)
C4 0.63467 (7) 0.17883 (13) 0.43757 (7) 0.01519 (17)
H4A 0.6358 0.2197 0.5093 0.018*
C5 0.54574 (7) 0.17947 (13) 0.36424 (7) 0.01414 (16)
H5A 0.4852 0.2209 0.3850 0.017*
C6 0.54695 (6) 0.11829 (13) 0.25977 (7) 0.01296 (16)
C7 0.36061 (6) 0.09299 (12) 0.18864 (7) 0.01266 (16)
C8 0.31097 (7) 0.12254 (13) 0.08482 (7) 0.01365 (16)
C9 0.20306 (7) 0.09756 (13) 0.04465 (7) 0.01549 (17)
C10 0.32346 (7) 0.03491 (14) 0.28808 (7) 0.01660 (18)
H10A 0.3749 −0.0389 0.3327 0.025*
H10B 0.2624 −0.0381 0.2686 0.025*
H10C 0.3087 0.1434 0.3284 0.025*
C11 0.06813 (7) 0.14784 (16) −0.09678 (8) 0.0212 (2)
H11A 0.0276 0.1941 −0.0440 0.025*
H11B 0.0510 0.0175 −0.1116 0.025*
C12 0.04675 (8) 0.25753 (17) −0.19890 (8) 0.0252 (2)
H12A −0.0243 0.2459 −0.2301 0.038*
H12B 0.0879 0.2116 −0.2502 0.038*
H12C 0.0627 0.3866 −0.1830 0.038*

Atomic displacement parameters (Å2)

U11 U22 U33 U12 U13 U23
O1 0.0132 (3) 0.0239 (4) 0.0165 (3) −0.0003 (3) 0.0008 (2) 0.0035 (3)
O2 0.0228 (4) 0.0363 (5) 0.0175 (3) −0.0044 (3) −0.0011 (3) 0.0009 (3)
O3 0.0157 (3) 0.0370 (5) 0.0330 (4) 0.0053 (3) 0.0024 (3) 0.0051 (4)
O4 0.0167 (3) 0.0304 (4) 0.0189 (3) −0.0049 (3) 0.0043 (2) 0.0031 (3)
N1 0.0132 (3) 0.0159 (4) 0.0106 (3) −0.0003 (3) 0.0035 (2) 0.0001 (3)
N2 0.0153 (3) 0.0219 (4) 0.0116 (3) −0.0003 (3) 0.0039 (3) 0.0019 (3)
N3 0.0146 (3) 0.0198 (4) 0.0130 (3) −0.0003 (3) 0.0036 (3) 0.0011 (3)
N4 0.0155 (4) 0.0227 (4) 0.0197 (4) −0.0016 (3) 0.0009 (3) 0.0060 (3)
C1 0.0166 (4) 0.0165 (4) 0.0150 (4) 0.0002 (3) 0.0056 (3) −0.0009 (3)
C2 0.0143 (4) 0.0169 (4) 0.0194 (4) 0.0013 (3) 0.0057 (3) 0.0007 (3)
C3 0.0136 (4) 0.0156 (4) 0.0159 (4) −0.0009 (3) 0.0013 (3) 0.0030 (3)
C4 0.0159 (4) 0.0164 (4) 0.0133 (3) −0.0003 (3) 0.0027 (3) 0.0012 (3)
C5 0.0141 (4) 0.0158 (4) 0.0130 (3) 0.0006 (3) 0.0037 (3) 0.0001 (3)
C6 0.0130 (4) 0.0132 (4) 0.0128 (3) −0.0004 (3) 0.0028 (3) 0.0008 (3)
C7 0.0136 (4) 0.0121 (4) 0.0129 (3) −0.0009 (3) 0.0041 (3) −0.0005 (3)
C8 0.0141 (4) 0.0152 (4) 0.0124 (3) −0.0004 (3) 0.0042 (3) −0.0003 (3)
C9 0.0149 (4) 0.0175 (4) 0.0142 (4) 0.0006 (3) 0.0027 (3) −0.0014 (3)
C10 0.0176 (4) 0.0198 (4) 0.0134 (4) −0.0026 (3) 0.0057 (3) 0.0010 (3)
C11 0.0130 (4) 0.0282 (5) 0.0213 (4) −0.0002 (4) −0.0007 (3) 0.0024 (4)
C12 0.0207 (5) 0.0312 (6) 0.0220 (4) 0.0025 (4) −0.0015 (4) 0.0047 (4)

Geometric parameters (Å, °)

O1—C9 1.3348 (11) C4—C5 1.3901 (12)
O1—C11 1.4685 (11) C4—H4A 0.9500
O2—N4 1.2303 (12) C5—C6 1.3933 (12)
O3—N4 1.2246 (12) C5—H5A 0.9500
O4—C9 1.2103 (12) C7—C8 1.3849 (12)
N1—C7 1.3616 (11) C7—C10 1.4878 (12)
N1—N2 1.3705 (10) C8—C9 1.4751 (13)
N1—C6 1.4258 (11) C10—H10A 0.9800
N2—N3 1.3022 (11) C10—H10B 0.9800
N3—C8 1.3686 (11) C10—H10C 0.9800
N4—C3 1.4730 (12) C11—C12 1.5029 (14)
C1—C2 1.3879 (13) C11—H11A 0.9900
C1—C6 1.3962 (13) C11—H11B 0.9900
C1—H1A 0.9500 C12—H12A 0.9800
C2—C3 1.3897 (13) C12—H12B 0.9800
C2—H2A 0.9500 C12—H12C 0.9800
C3—C4 1.3846 (13)
C9—O1—C11 114.50 (8) N1—C7—C8 103.28 (7)
C7—N1—N2 111.11 (7) N1—C7—C10 125.27 (8)
C7—N1—C6 131.17 (7) C8—C7—C10 131.44 (8)
N2—N1—C6 117.71 (7) N3—C8—C7 109.38 (8)
N3—N2—N1 107.24 (7) N3—C8—C9 123.56 (8)
N2—N3—C8 108.98 (7) C7—C8—C9 127.01 (8)
O3—N4—O2 124.49 (9) O4—C9—O1 125.10 (9)
O3—N4—C3 117.77 (9) O4—C9—C8 122.48 (8)
O2—N4—C3 117.74 (8) O1—C9—C8 112.41 (8)
C2—C1—C6 119.36 (8) C7—C10—H10A 109.5
C2—C1—H1A 120.3 C7—C10—H10B 109.5
C6—C1—H1A 120.3 H10A—C10—H10B 109.5
C1—C2—C3 118.52 (8) C7—C10—H10C 109.5
C1—C2—H2A 120.7 H10A—C10—H10C 109.5
C3—C2—H2A 120.7 H10B—C10—H10C 109.5
C4—C3—C2 122.51 (8) O1—C11—C12 107.67 (8)
C4—C3—N4 118.52 (8) O1—C11—H11A 110.2
C2—C3—N4 118.97 (8) C12—C11—H11A 110.2
C3—C4—C5 119.11 (8) O1—C11—H11B 110.2
C3—C4—H4A 120.4 C12—C11—H11B 110.2
C5—C4—H4A 120.4 H11A—C11—H11B 108.5
C4—C5—C6 118.85 (8) C11—C12—H12A 109.5
C4—C5—H5A 120.6 C11—C12—H12B 109.5
C6—C5—H5A 120.6 H12A—C12—H12B 109.5
C5—C6—C1 121.66 (8) C11—C12—H12C 109.5
C5—C6—N1 120.02 (8) H12A—C12—H12C 109.5
C1—C6—N1 118.27 (8) H12B—C12—H12C 109.5
C7—N1—N2—N3 0.42 (10) C7—N1—C6—C1 142.62 (10)
C6—N1—N2—N3 179.36 (8) N2—N1—C6—C1 −36.07 (12)
N1—N2—N3—C8 −0.58 (10) N2—N1—C7—C8 −0.07 (10)
C6—C1—C2—C3 0.41 (14) C6—N1—C7—C8 −178.83 (9)
C1—C2—C3—C4 0.58 (14) N2—N1—C7—C10 179.02 (9)
C1—C2—C3—N4 −179.20 (8) C6—N1—C7—C10 0.27 (15)
O3—N4—C3—C4 171.06 (9) N2—N3—C8—C7 0.56 (11)
O2—N4—C3—C4 −8.86 (13) N2—N3—C8—C9 −177.07 (9)
O3—N4—C3—C2 −9.16 (13) N1—C7—C8—N3 −0.28 (10)
O2—N4—C3—C2 170.93 (9) C10—C7—C8—N3 −179.30 (9)
C2—C3—C4—C5 −0.85 (14) N1—C7—C8—C9 177.24 (9)
N4—C3—C4—C5 178.93 (8) C10—C7—C8—C9 −1.78 (17)
C3—C4—C5—C6 0.12 (14) C11—O1—C9—O4 1.16 (14)
C4—C5—C6—C1 0.87 (14) C11—O1—C9—C8 −179.05 (8)
C4—C5—C6—N1 −176.36 (8) N3—C8—C9—O4 166.28 (9)
C2—C1—C6—C5 −1.14 (14) C7—C8—C9—O4 −10.92 (16)
C2—C1—C6—N1 176.14 (8) N3—C8—C9—O1 −13.51 (13)
C7—N1—C6—C5 −40.05 (14) C7—C8—C9—O1 169.29 (9)
N2—N1—C6—C5 141.26 (9) C9—O1—C11—C12 171.11 (9)

Hydrogen-bond geometry (Å, °)

D—H···A D—H H···A D···A D—H···A
C1—H1A···N3i 0.95 2.59 3.5243 (12) 168
C5—H5A···N2ii 0.95 2.60 3.2347 (12) 125
C5—H5A···N3ii 0.95 2.54 3.4127 (12) 154
C10—H10B···O4 0.98 2.48 3.0936 (12) 120

Symmetry codes: (i) −x+1, −y, −z; (ii) x, −y+1/2, z+1/2.

Footnotes

Supplementary data and figures for this paper are available from the IUCr electronic archives (Reference: HB6375).

References

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Associated Data

This section collects any data citations, data availability statements, or supplementary materials included in this article.

Supplementary Materials

Crystal structure: contains datablock(s) global, I. DOI: 10.1107/S1600536811033940/hb6375sup1.cif

e-67-o2416-sup1.cif (17.9KB, cif)

Structure factors: contains datablock(s) I. DOI: 10.1107/S1600536811033940/hb6375Isup2.hkl

e-67-o2416-Isup2.hkl (219KB, hkl)

Supplementary material file. DOI: 10.1107/S1600536811033940/hb6375Isup3.cml

Additional supplementary materials: crystallographic information; 3D view; checkCIF report


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