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Acta Crystallographica Section E: Structure Reports Online logoLink to Acta Crystallographica Section E: Structure Reports Online
. 2011 Aug 27;67(Pt 9):o2472. doi: 10.1107/S1600536811033915

2-Oxo-4-(thio­phen-2-yl)-1,2,5,6-tetra­hydro­benzo[h]quinoline-3-carbonitrile

Abdullah M Asiri a, Hassan M Faidallah a, Abdulrahman O Al-Youbi a, Khalid A Alamry a, Seik Weng Ng b,a,*
PMCID: PMC3200622  PMID: 22065622

Abstract

In the mol­ecule of the title compound, C18H12N2OS, the tetra­hydro­benzo[h]quinoline fused-ring system is buckled owing to the ethyl­ene –CH2CH2– fragment, the benzene ring and the pyridine ring being twisted by 16.0 (1)°. The 4-substituted aromatic ring is bent away from the pyridine ring by 59.5 (2)° (for the major disordered thienyl component) in order to avoid crowding the cyanide substituent. In the crystal, two mol­ecules are linked by a pair of N—H⋯O hydrogen bonds to form a centrosymmetric dimer. The thienyl ring is disordered over two sites in a 72.7 (2):27.3 ratio.

Related literature

For background to the anti­cancer properties of this class of compounds, see: Rostom et al. (2011) .graphic file with name e-67-o2472-scheme1.jpg

Experimental

Crystal data

  • C18H12N2OS

  • M r = 304.36

  • Triclinic, Inline graphic

  • a = 6.9952 (3) Å

  • b = 9.1809 (4) Å

  • c = 11.1837 (5) Å

  • α = 93.990 (4)°

  • β = 95.293 (4)°

  • γ = 100.903 (4)°

  • V = 699.48 (5) Å3

  • Z = 2

  • Cu Kα radiation

  • μ = 2.07 mm−1

  • T = 100 K

  • 0.30 × 0.25 × 0.20 mm

Data collection

  • Agilent SuperNova Dual diffractometer with Atlas detector

  • Absorption correction: multi-scan (CrysAlis PRO; Agilent, 2010) T min = 0.575, T max = 0.682

  • 5795 measured reflections

  • 2740 independent reflections

  • 2600 reflections with I > 2σ(I)

  • R int = 0.020

Refinement

  • R[F 2 > 2σ(F 2)] = 0.035

  • wR(F 2) = 0.098

  • S = 1.07

  • 2740 reflections

  • 216 parameters

  • 19 restraints

  • H atoms treated by a mixture of independent and constrained refinement

  • Δρmax = 0.22 e Å−3

  • Δρmin = −0.45 e Å−3

Data collection: CrysAlis PRO (Agilent, 2010); cell refinement: CrysAlis PRO; data reduction: CrysAlis PRO; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: X-SEED (Barbour, 2001); software used to prepare material for publication: publCIF (Westrip, 2010).

Supplementary Material

Crystal structure: contains datablock(s) global, I. DOI: 10.1107/S1600536811033915/xu5294sup1.cif

e-67-o2472-sup1.cif (19.9KB, cif)

Structure factors: contains datablock(s) I. DOI: 10.1107/S1600536811033915/xu5294Isup2.hkl

e-67-o2472-Isup2.hkl (134.5KB, hkl)

Supplementary material file. DOI: 10.1107/S1600536811033915/xu5294Isup3.cml

Additional supplementary materials: crystallographic information; 3D view; checkCIF report

Table 1. Hydrogen-bond geometry (Å, °).

D—H⋯A D—H H⋯A DA D—H⋯A
N1—H1⋯O1i 0.89 (1) 1.97 (1) 2.851 (1) 173 (2)

Symmetry code: (i) Inline graphic.

Acknowledgments

The authors thank King Abdulaziz University and the University of Malaya for supporting this study.

supplementary crystallographic information

Comment

The compound (Scheme I) belongs to a series of cyano-pyridinones that have been evaluated for their anticancer properties (Rostom et al., 2011). The tetrahydrobenzo[h]quinoline fused-ring system is buckled owing to the ethylene –CH2CH2– fragment, the benzene ring and the pyridine ring being twisted by 16.0 (1)°. The 4-subsituted aromatic ring is bent away from the pyridine ring by 59.5 (2) ° in order to avoid crowding the cyanide substituent (Fig. 1). Two molecules are linked by an N—H···O hydrogen bonds to form a centrosymmetric dimer (Table 1).

Experimental

A mixture of thiophene-2-carbaldehyde (1.10 g, 10 mmol), 1-tetralone (1.46 g, 10 mmol), ethyl cyanoacetate (1.1 g, 10 mmol) and ammonium acetate (6.2 g, 80 mmol) in absolute ethanol (50 ml) was refluxed for 6 h. The reaction mixture was allowed to cool, and the yellow precipitate that formed was filtered, washed with water, dried and recrystallized from ethanol; m.p. 622–623 K.

Refinement

Carbon- and nitrogen-bound H atoms were placed in calculated positions [C—H 0.95 to 0.99 Uiso(H) = 1.2Ueq(C)] and were included in the refinement in the riding model approximation.

The amino H atom was located in a difference Fourier map and was refined with an N—H 0.88 (1) Å restraint.

The thienyl ring is disordered over two positions in a 72.7 (2):27.3 ratio. The temperature factors of the primed atoms were set to those of the unprimed ones; the atom that is connected to the fused-ring is ordered. The anisotropic temperature factors of the disordered atoms were tightly restrained to be nearly isotropic.

Figures

Fig. 1.

Fig. 1.

Thermal ellipsoid plot (Barbour, 2001) of C18H12N2OS at the 70% probability level; hydrogen atoms are drawn as spheres of arbitrary radius. The disorder in the thienyl ring is not shown.

Crystal data

C18H12N2OS Z = 2
Mr = 304.36 F(000) = 316
Triclinic, P1 Dx = 1.445 Mg m3
Hall symbol: -P 1 Cu Kα radiation, λ = 1.54184 Å
a = 6.9952 (3) Å Cell parameters from 4426 reflections
b = 9.1809 (4) Å θ = 4.0–74.1°
c = 11.1837 (5) Å µ = 2.07 mm1
α = 93.990 (4)° T = 100 K
β = 95.293 (4)° Prism, yellow
γ = 100.903 (4)° 0.30 × 0.25 × 0.20 mm
V = 699.48 (5) Å3

Data collection

Agilent SuperNova Dual diffractometer with Atlas detector 2740 independent reflections
Radiation source: SuperNova (Cu) X-ray Source 2600 reflections with I > 2σ(I)
mirror Rint = 0.020
Detector resolution: 10.4041 pixels mm-1 θmax = 74.3°, θmin = 4.0°
ω scans h = −7→8
Absorption correction: multi-scan (CrysAlis PRO; Agilent, 2010) k = −11→10
Tmin = 0.575, Tmax = 0.682 l = −13→13
5795 measured reflections

Refinement

Refinement on F2 Primary atom site location: structure-invariant direct methods
Least-squares matrix: full Secondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.035 Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.098 H atoms treated by a mixture of independent and constrained refinement
S = 1.07 w = 1/[σ2(Fo2) + (0.0555P)2 + 0.2491P] where P = (Fo2 + 2Fc2)/3
2740 reflections (Δ/σ)max = 0.001
216 parameters Δρmax = 0.22 e Å3
19 restraints Δρmin = −0.45 e Å3

Fractional atomic coordinates and isotropic or equivalent isotropic displacement parameters (Å2)

x y z Uiso*/Ueq Occ. (<1)
S1 1.02806 (12) 0.99939 (9) 0.19100 (9) 0.0171 (2) 0.727 (2)
C1 1.2328 (6) 1.0301 (6) 0.1115 (5) 0.0157 (7) 0.727 (2)
H1A 1.2578 1.1055 0.0578 0.019* 0.727 (2)
C2 1.3559 (7) 0.9300 (6) 0.1367 (5) 0.0163 (7) 0.727 (2)
H2 1.4748 0.9289 0.1022 0.020* 0.727 (2)
C3 1.2770 (14) 0.8250 (17) 0.2247 (12) 0.0299 (8) 0.727 (2)
H3 1.3373 0.7474 0.2526 0.036* 0.727 (2)
S1' 1.3139 (8) 0.8217 (10) 0.2250 (7) 0.0299 (8) 0.27
C1' 1.0531 (18) 0.9773 (13) 0.1982 (12) 0.0171 (2) 0.27
H1' 0.9394 1.0180 0.2067 0.021* 0.273 (2)
C2' 1.196 (2) 1.025 (2) 0.1248 (15) 0.0157 (7) 0.27
H2' 1.1922 1.1045 0.0750 0.019* 0.273 (2)
C3' 1.330 (2) 0.9528 (19) 0.1306 (17) 0.0163 (7) 0.27
H3' 1.4357 0.9723 0.0829 0.020* 0.273 (2)
O1 0.50080 (13) 0.56034 (11) 0.36325 (8) 0.0192 (2)
N1 0.76813 (15) 0.61659 (12) 0.50268 (10) 0.0153 (2)
H1 0.692 (2) 0.5628 (18) 0.5492 (14) 0.027 (4)*
N2 0.64560 (17) 0.68980 (14) 0.08687 (10) 0.0219 (3)
C4 1.10455 (19) 0.85666 (15) 0.25948 (11) 0.0162 (3)
C5 0.71303 (18) 0.69445 (15) 0.18506 (12) 0.0168 (3)
C6 0.67568 (18) 0.62164 (15) 0.38930 (12) 0.0159 (3)
C7 0.79651 (18) 0.70041 (15) 0.30795 (12) 0.0159 (3)
C8 0.98753 (19) 0.77471 (15) 0.34578 (12) 0.0160 (3)
C9 1.06717 (19) 0.77150 (15) 0.46658 (12) 0.0162 (3)
C10 1.26416 (19) 0.86240 (16) 0.52013 (12) 0.0198 (3)
H10A 1.2453 0.9555 0.5636 0.024*
H10B 1.3466 0.8896 0.4547 0.024*
C11 1.36693 (19) 0.77390 (16) 0.60685 (12) 0.0182 (3)
H11A 1.4051 0.6897 0.5610 0.022*
H11B 1.4876 0.8387 0.6482 0.022*
C12 1.23569 (19) 0.71478 (14) 0.69931 (12) 0.0164 (3)
C13 1.3114 (2) 0.69892 (15) 0.81603 (12) 0.0203 (3)
H13 1.4490 0.7224 0.8373 0.024*
C14 1.1894 (2) 0.64951 (16) 0.90172 (12) 0.0217 (3)
H14 1.2435 0.6397 0.9811 0.026*
C15 0.9873 (2) 0.61428 (15) 0.87154 (12) 0.0202 (3)
H15 0.9033 0.5831 0.9309 0.024*
C16 0.90914 (19) 0.62486 (15) 0.75477 (12) 0.0181 (3)
H16 0.7716 0.5983 0.7337 0.022*
C17 1.03169 (19) 0.67444 (14) 0.66757 (11) 0.0153 (3)
C18 0.95516 (18) 0.68759 (14) 0.54271 (11) 0.0153 (3)

Atomic displacement parameters (Å2)

U11 U22 U33 U12 U13 U23
S1 0.0179 (4) 0.0139 (4) 0.0219 (3) 0.0049 (2) 0.0047 (2) 0.0097 (2)
C1 0.0132 (19) 0.0185 (8) 0.0149 (14) −0.0033 (14) 0.0089 (11) 0.0063 (9)
C2 0.0145 (16) 0.0178 (19) 0.0197 (9) 0.0090 (9) 0.0038 (11) 0.0044 (11)
C3 0.029 (2) 0.0331 (6) 0.0259 (4) −0.0033 (16) 0.0123 (14) 0.0043 (4)
S1' 0.029 (2) 0.0331 (6) 0.0259 (4) −0.0033 (16) 0.0123 (14) 0.0043 (4)
C1' 0.0179 (4) 0.0139 (4) 0.0219 (3) 0.0049 (2) 0.0047 (2) 0.0097 (2)
C2' 0.0132 (19) 0.0185 (8) 0.0149 (14) −0.0033 (14) 0.0089 (11) 0.0063 (9)
C3' 0.0145 (16) 0.0178 (19) 0.0197 (9) 0.0090 (9) 0.0038 (11) 0.0044 (11)
O1 0.0129 (4) 0.0267 (5) 0.0170 (5) 0.0003 (4) 0.0007 (3) 0.0071 (4)
N1 0.0134 (5) 0.0190 (6) 0.0137 (5) 0.0012 (4) 0.0029 (4) 0.0054 (4)
N2 0.0192 (6) 0.0287 (7) 0.0182 (6) 0.0045 (5) 0.0013 (5) 0.0070 (5)
C4 0.0159 (6) 0.0181 (7) 0.0138 (6) 0.0011 (5) 0.0005 (5) 0.0050 (5)
C5 0.0132 (6) 0.0189 (7) 0.0192 (7) 0.0030 (5) 0.0043 (5) 0.0055 (5)
C6 0.0141 (6) 0.0182 (6) 0.0160 (6) 0.0040 (5) 0.0015 (5) 0.0033 (5)
C7 0.0148 (6) 0.0191 (7) 0.0147 (6) 0.0043 (5) 0.0026 (5) 0.0052 (5)
C8 0.0159 (6) 0.0174 (6) 0.0163 (6) 0.0049 (5) 0.0038 (5) 0.0044 (5)
C9 0.0147 (6) 0.0177 (6) 0.0158 (6) 0.0015 (5) 0.0022 (5) 0.0036 (5)
C10 0.0176 (6) 0.0222 (7) 0.0169 (6) −0.0030 (5) 0.0010 (5) 0.0041 (5)
C11 0.0139 (6) 0.0220 (7) 0.0168 (6) −0.0006 (5) 0.0004 (5) 0.0023 (5)
C12 0.0177 (6) 0.0149 (6) 0.0157 (6) 0.0015 (5) 0.0007 (5) 0.0009 (5)
C13 0.0190 (7) 0.0206 (7) 0.0186 (7) −0.0007 (5) −0.0024 (5) 0.0020 (5)
C14 0.0268 (7) 0.0212 (7) 0.0148 (6) 0.0005 (6) −0.0030 (5) 0.0035 (5)
C15 0.0242 (7) 0.0201 (7) 0.0152 (6) −0.0001 (5) 0.0037 (5) 0.0037 (5)
C16 0.0172 (6) 0.0191 (7) 0.0170 (6) 0.0009 (5) 0.0018 (5) 0.0028 (5)
C17 0.0175 (6) 0.0144 (6) 0.0138 (6) 0.0026 (5) 0.0015 (5) 0.0015 (5)
C18 0.0148 (6) 0.0163 (6) 0.0151 (6) 0.0036 (5) 0.0020 (5) 0.0020 (5)

Geometric parameters (Å, °)

S1—C4 1.7085 (14) C6—C7 1.4378 (18)
S1—C1 1.743 (3) C7—C8 1.3930 (18)
C1—C2 1.398 (6) C8—C9 1.4175 (18)
C1—H1A 0.9500 C9—C18 1.3850 (18)
C2—C3 1.495 (15) C9—C10 1.5156 (18)
C2—H2 0.9500 C10—C11 1.5230 (19)
C3—C4 1.377 (10) C10—H10A 0.9900
C3—H3 0.9500 C10—H10B 0.9900
S1'—C4 1.631 (6) C11—C12 1.5071 (17)
S1'—C3' 1.651 (19) C11—H11A 0.9900
C1'—C2' 1.377 (18) C11—H11B 0.9900
C1'—C4 1.427 (11) C12—C13 1.3904 (18)
C1'—H1' 0.9500 C12—C17 1.4099 (18)
C2'—C3' 1.25 (2) C13—C14 1.385 (2)
C2'—H2' 0.9500 C13—H13 0.9500
C3'—H3' 0.9500 C14—C15 1.393 (2)
O1—C6 1.2447 (16) C14—H14 0.9500
N1—C18 1.3659 (17) C15—C16 1.3856 (19)
N1—C6 1.3771 (16) C15—H15 0.9500
N1—H1 0.885 (9) C16—C17 1.4005 (18)
N2—C5 1.1491 (18) C16—H16 0.9500
C4—C8 1.4770 (17) C17—C18 1.4701 (17)
C5—C7 1.4361 (18)
C4—S1—C1 92.12 (19) C7—C8—C4 119.51 (12)
C2—C1—S1 111.6 (4) C9—C8—C4 120.73 (12)
C2—C1—H1A 124.2 C18—C9—C8 118.65 (12)
S1—C1—H1A 124.2 C18—C9—C10 117.54 (12)
C1—C2—C3 111.6 (6) C8—C9—C10 123.70 (12)
C1—C2—H2 124.2 C9—C10—C11 110.44 (11)
C3—C2—H2 124.2 C9—C10—H10A 109.6
C4—C3—C2 110.3 (10) C11—C10—H10A 109.6
C4—C3—H3 124.9 C9—C10—H10B 109.6
C2—C3—H3 124.9 C11—C10—H10B 109.6
C4—S1'—C3' 90.2 (6) H10A—C10—H10B 108.1
C2'—C1'—C4 108.7 (11) C12—C11—C10 111.07 (11)
C2'—C1'—H1' 125.6 C12—C11—H11A 109.4
C4—C1'—H1' 125.6 C10—C11—H11A 109.4
C3'—C2'—C1' 112.7 (15) C12—C11—H11B 109.4
C3'—C2'—H2' 123.6 C10—C11—H11B 109.4
C1'—C2'—H2' 123.6 H11A—C11—H11B 108.0
C2'—C3'—S1' 116.8 (14) C13—C12—C17 118.92 (12)
C2'—C3'—H3' 121.6 C13—C12—C11 121.40 (12)
S1'—C3'—H3' 121.6 C17—C12—C11 119.69 (11)
C18—N1—C6 125.02 (11) C14—C13—C12 121.08 (13)
C18—N1—H1 122.2 (12) C14—C13—H13 119.5
C6—N1—H1 112.8 (12) C12—C13—H13 119.5
C3—C4—C1' 110.3 (8) C13—C14—C15 120.03 (13)
C3—C4—C8 124.6 (6) C13—C14—H14 120.0
C1'—C4—C8 125.0 (5) C15—C14—H14 120.0
C1'—C4—S1' 111.5 (6) C16—C15—C14 119.84 (12)
C8—C4—S1' 123.5 (3) C16—C15—H15 120.1
C3—C4—S1 114.4 (6) C14—C15—H15 120.1
C8—C4—S1 120.97 (10) C15—C16—C17 120.41 (12)
S1'—C4—S1 115.5 (3) C15—C16—H16 119.8
N2—C5—C7 179.74 (15) C17—C16—H16 119.8
O1—C6—N1 120.39 (11) C16—C17—C12 119.65 (12)
O1—C6—C7 124.73 (12) C16—C17—C18 122.26 (12)
N1—C6—C7 114.88 (11) C12—C17—C18 118.08 (11)
C8—C7—C5 121.69 (11) N1—C18—C9 119.93 (12)
C8—C7—C6 121.52 (12) N1—C18—C17 118.58 (11)
C5—C7—C6 116.76 (11) C9—C18—C17 121.49 (12)
C7—C8—C9 119.75 (12)
C4—S1—C1—C2 0.8 (4) S1—C4—C8—C7 59.63 (16)
S1—C1—C2—C3 0.0 (8) C3—C4—C8—C9 61.7 (7)
C1—C2—C3—C4 −1.1 (11) C1'—C4—C8—C9 −119.9 (7)
C4—C1'—C2'—C3' 0(2) S1'—C4—C8—C9 58.6 (4)
C1'—C2'—C3'—S1' −2(2) S1—C4—C8—C9 −120.06 (13)
C4—S1'—C3'—C2' 2.4 (17) C7—C8—C9—C18 3.23 (19)
C2—C3—C4—C1' 1.5 (11) C4—C8—C9—C18 −177.08 (12)
C2—C3—C4—C8 −179.9 (5) C7—C8—C9—C10 −172.91 (12)
C2—C3—C4—S1' −113 (20) C4—C8—C9—C10 6.8 (2)
C2—C3—C4—S1 1.7 (10) C18—C9—C10—C11 40.78 (16)
C2'—C1'—C4—C3 −0.9 (14) C8—C9—C10—C11 −143.04 (13)
C2'—C1'—C4—C8 −179.6 (9) C9—C10—C11—C12 −52.44 (15)
C2'—C1'—C4—S1' 1.8 (13) C10—C11—C12—C13 −147.28 (13)
C2'—C1'—C4—S1 −177 (9) C10—C11—C12—C17 32.72 (17)
C3'—S1'—C4—C3 64 (19) C17—C12—C13—C14 −2.3 (2)
C3'—S1'—C4—C1' −2.3 (10) C11—C12—C13—C14 177.69 (13)
C3'—S1'—C4—C8 179.1 (7) C12—C13—C14—C15 0.2 (2)
C3'—S1'—C4—S1 −2.2 (8) C13—C14—C15—C16 1.8 (2)
C1—S1—C4—C3 −1.5 (6) C14—C15—C16—C17 −1.6 (2)
C1—S1—C4—C1' 2(8) C15—C16—C17—C12 −0.5 (2)
C1—S1—C4—C8 −180.0 (2) C15—C16—C17—C18 −179.92 (12)
C1—S1—C4—S1' 1.3 (4) C13—C12—C17—C16 2.4 (2)
C18—N1—C6—O1 −175.77 (12) C11—C12—C17—C16 −177.59 (12)
C18—N1—C6—C7 4.57 (19) C13—C12—C17—C18 −178.11 (12)
O1—C6—C7—C8 175.70 (13) C11—C12—C17—C18 1.90 (18)
N1—C6—C7—C8 −4.65 (19) C6—N1—C18—C9 −0.6 (2)
O1—C6—C7—C5 −6.4 (2) C6—N1—C18—C17 178.47 (11)
N1—C6—C7—C5 173.28 (11) C8—C9—C18—N1 −3.49 (19)
C5—C7—C8—C9 −176.88 (12) C10—C9—C18—N1 172.89 (12)
C6—C7—C8—C9 0.9 (2) C8—C9—C18—C17 177.49 (11)
C5—C7—C8—C4 3.42 (19) C10—C9—C18—C17 −6.14 (19)
C6—C7—C8—C4 −178.75 (12) C16—C17—C18—N1 −16.20 (19)
C3—C4—C8—C7 −118.6 (7) C12—C17—C18—N1 164.33 (12)
C1'—C4—C8—C7 59.8 (7) C16—C17—C18—C9 162.84 (13)
S1'—C4—C8—C7 −121.7 (4) C12—C17—C18—C9 −16.63 (19)

Hydrogen-bond geometry (Å, °)

D—H···A D—H H···A D···A D—H···A
N1—H1···O1i 0.89 (1) 1.97 (1) 2.851 (1) 173 (2)

Symmetry codes: (i) −x+1, −y+1, −z+1.

Footnotes

Supplementary data and figures for this paper are available from the IUCr electronic archives (Reference: XU5294).

References

  1. Agilent (2010). CrysAlis PRO Agilent Technologies, Yarnton, Oxfordshire, England.
  2. Barbour, L. J. (2001). J. Supramol. Chem. 1, 189–191.
  3. Rostom, S. A. F., Faidallah, H. M. & Al-Saadi, M. S. (2011). Med. Chem. Res. 20 (DOI: 10.1007/s00044-010-9469-0).
  4. Sheldrick, G. M. (2008). Acta Cryst. A64, 112–122. [DOI] [PubMed]
  5. Westrip, S. P. (2010). J. Appl. Cryst. 43, 920–925.

Associated Data

This section collects any data citations, data availability statements, or supplementary materials included in this article.

Supplementary Materials

Crystal structure: contains datablock(s) global, I. DOI: 10.1107/S1600536811033915/xu5294sup1.cif

e-67-o2472-sup1.cif (19.9KB, cif)

Structure factors: contains datablock(s) I. DOI: 10.1107/S1600536811033915/xu5294Isup2.hkl

e-67-o2472-Isup2.hkl (134.5KB, hkl)

Supplementary material file. DOI: 10.1107/S1600536811033915/xu5294Isup3.cml

Additional supplementary materials: crystallographic information; 3D view; checkCIF report


Articles from Acta Crystallographica Section E: Structure Reports Online are provided here courtesy of International Union of Crystallography

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