Abstract
In the title compound, C15H13NO3S2, the dithiolane ring adopts a twisted conformation. The molecule exhibits a V-shaped conformation, with a dihedral angle of 79.05 (7)° between the benzene ring and the pyridine ring. In the crystal, C—H⋯O interactions are observed.
Related literature
For the synthesis, see: Li et al. (2008 ▶). For background to N-substituted pyridine compounds and their potential use in medicinal chemistry, see: Kim et al. (2008 ▶); Zhu et al. (2006 ▶)
Experimental
Crystal data
C15H13NO3S2
M r = 319.40
Monoclinic,
a = 5.322 (2) Å
b = 27.521 (11) Å
c = 10.065 (4) Å
β = 100.831 (5)°
V = 1448.0 (10) Å3
Z = 4
Mo Kα radiation
μ = 0.38 mm−1
T = 293 K
0.35 × 0.29 × 0.28 mm
Data collection
Bruker APEXII CCD diffractometer
Absorption correction: multi-scan (SADABS; Bruker, 2002 ▶) T min = 0.892, T max = 0.912
12346 measured reflections
2905 independent reflections
1973 reflections with I > 2σ(I)
R int = 0.053
Refinement
R[F 2 > 2σ(F 2)] = 0.045
wR(F 2) = 0.121
S = 1.08
2905 reflections
190 parameters
H-atom parameters constrained
Δρmax = 0.43 e Å−3
Δρmin = −0.30 e Å−3
Data collection: APEX2 (Bruker, 2002 ▶); cell refinement: SAINT (Bruker, 2002 ▶); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: SHELXTL (Sheldrick, 2008 ▶); software used to prepare material for publication: SHELXTL.
Supplementary Material
Crystal structure: contains datablock(s) global, I. DOI: 10.1107/S1600536811033009/ff2024sup1.cif
Structure factors: contains datablock(s) I. DOI: 10.1107/S1600536811033009/ff2024Isup2.hkl
Supplementary material file. DOI: 10.1107/S1600536811033009/ff2024Isup3.cml
Additional supplementary materials: crystallographic information; 3D view; checkCIF report
Table 1. Hydrogen-bond geometry (Å, °).
| D—H⋯A | D—H | H⋯A | D⋯A | D—H⋯A |
|---|---|---|---|---|
| C8—H8⋯O2i | 0.93 | 2.42 | 3.259 (3) | 150 |
Symmetry code: (i)
.
Acknowledgments
The authors thank the Educational Institute of Jilin Province for supporting this work.
supplementary crystallographic information
Comment
Among the richness of heterocyclic compounds, N-substituted pyridone compounds (Zhu et al., 2006) have attracted an intense interest due to their potential for medicinal chemistry (Kim et al., 2008). Recently, a large number of N-substituted pyridone compounds have been prepared (Li et al., 2008). As a contribution to this field, the structure of the title crystal is presented here. The molecular structure of the title compound, together with the atom-numbering scheme, is illustrated in Fig.1. Selected bond lengths and angles are given in Table 1. The molecule exhibits a V-shaped conformation in the crystal with a dihedral angle of 79.05 (7)° between the benzene ring and the pyridine ring. The dithiolane ring has a twisted conformation.
Experimental
The title compound was synthesized according to the literature (Li et al., 2008). It was dissolved in ethyl acetate at room temperature and hexane was added. The solution was kept at room temperature in a sealed flask for a few days to give single crystals suitable for single-crystal X-ray analysis.
Refinement
All H atoms bound to C atoms were generated geometrically and refined as riding atoms with C—H= 0.93Å for aromatic H , 0.96Å for CH3 groups, 0.97Å for CH2 groups, and with Uiso(H) = 1.5Ueq(C) for CH3 groups and Uiso(H) = 1.2Ueq(C) for all the other groups.
Figures
Fig. 1.
Molecular structure of the title compound with displacement ellipsoids drawn at the 30% probability level for non-H atoms.
Crystal data
| C15H13NO3S2 | Z = 4 |
| Mr = 319.40 | F(000) = 664 |
| Monoclinic, P21/n | Dx = 1.453 Mg m−3 |
| Hall symbol: -p 2yn | Mo Kα radiation, λ = 0.71073 Å |
| a = 5.322 (2) Å | θ = 2.7–27.1° |
| b = 27.521 (11) Å | µ = 0.38 mm−1 |
| c = 10.065 (4) Å | T = 293 K |
| β = 100.831 (5)° | Block, yellow |
| V = 1448.0 (10) Å3 | 0.35 × 0.29 × 0.28 mm |
Data collection
| Bruker APEXII CCD diffractometer | 2905 independent reflections |
| Radiation source: fine-focus sealed tube | 1973 reflections with I > 2σ(I) |
| graphite | Rint = 0.053 |
| ω scans | θmax = 26.2°, θmin = 2.2° |
| Absorption correction: multi-scan (SADABS; Bruker, 2002) | h = −6→6 |
| Tmin = 0.892, Tmax = 0.912 | k = −34→33 |
| 12346 measured reflections | l = −12→12 |
Refinement
| Refinement on F2 | Primary atom site location: structure-invariant direct methods |
| Least-squares matrix: full | Secondary atom site location: difference Fourier map |
| R[F2 > 2σ(F2)] = 0.045 | Hydrogen site location: inferred from neighbouring sites |
| wR(F2) = 0.121 | H-atom parameters constrained |
| S = 1.08 | w = 1/[σ2(Fo2) + (0.0581P)2] where P = (Fo2 + 2Fc2)/3 |
| 2905 reflections | (Δ/σ)max < 0.001 |
| 190 parameters | Δρmax = 0.43 e Å−3 |
| 0 restraints | Δρmin = −0.30 e Å−3 |
Special details
| Geometry. All esds (except the esd in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell esds are taken into account individually in the estimation of esds in distances, angles and torsion angles; correlations between esds in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell esds is used for estimating esds involving l.s. planes. |
| Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > 2sigma(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger. |
Fractional atomic coordinates and isotropic or equivalent isotropic displacement parameters (Å2)
| x | y | z | Uiso*/Ueq | ||
| S2 | 0.24453 (13) | 0.13081 (2) | 1.20138 (7) | 0.0510 (2) | |
| S1 | 0.45027 (15) | 0.05404 (2) | 1.05151 (8) | 0.0620 (3) | |
| N1 | 0.6394 (4) | 0.23410 (7) | 0.9727 (2) | 0.0462 (5) | |
| O2 | 0.3943 (3) | 0.21607 (6) | 1.12752 (18) | 0.0595 (5) | |
| O1 | 0.7470 (4) | 0.09067 (7) | 0.89857 (19) | 0.0670 (5) | |
| O3 | 0.5220 (4) | 0.43233 (7) | 1.0589 (2) | 0.0736 (6) | |
| C13 | 0.4297 (4) | 0.11562 (9) | 1.0831 (2) | 0.0418 (6) | |
| C11 | 0.5545 (4) | 0.14965 (8) | 1.0179 (2) | 0.0419 (6) | |
| C4 | 0.6118 (5) | 0.28548 (8) | 0.9964 (2) | 0.0452 (6) | |
| C12 | 0.5218 (4) | 0.20108 (8) | 1.0456 (2) | 0.0436 (6) | |
| C5 | 0.3930 (5) | 0.30960 (10) | 0.9369 (3) | 0.0586 (7) | |
| H5 | 0.2618 | 0.2929 | 0.8811 | 0.070* | |
| C6 | 0.3694 (5) | 0.35832 (10) | 0.9602 (3) | 0.0629 (8) | |
| H6 | 0.2219 | 0.3747 | 0.9197 | 0.075* | |
| C3 | 0.8034 (5) | 0.31005 (9) | 1.0787 (2) | 0.0516 (6) | |
| H3 | 0.9504 | 0.2936 | 1.1193 | 0.062* | |
| C7 | 0.5642 (5) | 0.38348 (9) | 1.0438 (3) | 0.0528 (6) | |
| C10 | 0.7144 (5) | 0.13424 (10) | 0.9219 (2) | 0.0484 (6) | |
| C8 | 0.7884 (5) | 0.21885 (10) | 0.8818 (2) | 0.0522 (7) | |
| H8 | 0.8649 | 0.2423 | 0.8362 | 0.063* | |
| C9 | 0.8276 (5) | 0.17249 (10) | 0.8563 (3) | 0.0525 (6) | |
| H9 | 0.9309 | 0.1646 | 0.7944 | 0.063* | |
| C2 | 0.7809 (5) | 0.35902 (9) | 1.1022 (3) | 0.0566 (7) | |
| H2 | 0.9130 | 0.3755 | 1.1578 | 0.068* | |
| C14 | 0.2073 (6) | 0.03558 (11) | 1.1426 (4) | 0.0849 (10) | |
| H14A | 0.0436 | 0.0341 | 1.0811 | 0.102* | |
| H14B | 0.2466 | 0.0034 | 1.1800 | 0.102* | |
| C15 | 0.1914 (7) | 0.06899 (10) | 1.2493 (4) | 0.0856 (11) | |
| H15A | 0.3178 | 0.0604 | 1.3284 | 0.103* | |
| H15B | 0.0236 | 0.0665 | 1.2733 | 0.103* | |
| C1 | 0.7075 (8) | 0.45886 (12) | 1.1489 (4) | 0.1129 (14) | |
| H1A | 0.6552 | 0.4922 | 1.1501 | 0.169* | |
| H1B | 0.8688 | 0.4570 | 1.1197 | 0.169* | |
| H1C | 0.7246 | 0.4454 | 1.2382 | 0.169* |
Atomic displacement parameters (Å2)
| U11 | U22 | U33 | U12 | U13 | U23 | |
| S2 | 0.0644 (4) | 0.0431 (4) | 0.0516 (4) | −0.0063 (3) | 0.0267 (3) | −0.0052 (3) |
| S1 | 0.0783 (5) | 0.0396 (4) | 0.0762 (5) | 0.0019 (3) | 0.0355 (4) | −0.0043 (3) |
| N1 | 0.0534 (12) | 0.0425 (12) | 0.0455 (12) | −0.0073 (9) | 0.0167 (10) | −0.0016 (9) |
| O2 | 0.0830 (13) | 0.0423 (10) | 0.0643 (12) | −0.0049 (9) | 0.0424 (11) | −0.0071 (8) |
| O1 | 0.0835 (14) | 0.0528 (12) | 0.0735 (13) | 0.0071 (10) | 0.0375 (11) | −0.0083 (10) |
| O3 | 0.0977 (16) | 0.0497 (12) | 0.0752 (14) | 0.0139 (11) | 0.0208 (12) | 0.0030 (10) |
| C13 | 0.0456 (14) | 0.0412 (13) | 0.0390 (13) | 0.0025 (10) | 0.0093 (10) | −0.0032 (10) |
| C11 | 0.0436 (13) | 0.0427 (13) | 0.0409 (14) | 0.0002 (11) | 0.0112 (11) | −0.0011 (11) |
| C4 | 0.0471 (14) | 0.0448 (15) | 0.0462 (14) | −0.0043 (11) | 0.0152 (11) | 0.0055 (11) |
| C12 | 0.0495 (14) | 0.0439 (14) | 0.0389 (13) | −0.0055 (11) | 0.0126 (11) | −0.0008 (11) |
| C5 | 0.0442 (15) | 0.0590 (18) | 0.0696 (18) | −0.0090 (13) | 0.0031 (13) | 0.0087 (14) |
| C6 | 0.0475 (16) | 0.0624 (18) | 0.079 (2) | 0.0068 (14) | 0.0109 (14) | 0.0181 (16) |
| C3 | 0.0512 (15) | 0.0476 (16) | 0.0530 (16) | 0.0020 (12) | 0.0020 (12) | 0.0010 (12) |
| C7 | 0.0675 (18) | 0.0476 (15) | 0.0478 (15) | 0.0033 (14) | 0.0220 (13) | 0.0053 (12) |
| C10 | 0.0489 (15) | 0.0541 (17) | 0.0440 (15) | 0.0022 (12) | 0.0136 (11) | −0.0026 (12) |
| C8 | 0.0502 (15) | 0.0654 (18) | 0.0446 (15) | −0.0103 (13) | 0.0179 (12) | 0.0012 (13) |
| C9 | 0.0538 (15) | 0.0616 (17) | 0.0471 (15) | −0.0036 (13) | 0.0224 (12) | −0.0070 (13) |
| C2 | 0.0629 (17) | 0.0517 (17) | 0.0518 (16) | −0.0027 (13) | 0.0017 (13) | −0.0031 (13) |
| C14 | 0.111 (3) | 0.0483 (17) | 0.110 (3) | −0.0121 (17) | 0.058 (2) | −0.0059 (18) |
| C15 | 0.126 (3) | 0.0514 (18) | 0.096 (2) | −0.0232 (18) | 0.065 (2) | −0.0066 (17) |
| C1 | 0.166 (4) | 0.060 (2) | 0.101 (3) | 0.015 (2) | −0.005 (3) | −0.026 (2) |
Geometric parameters (Å, °)
| S2—C13 | 1.733 (2) | C6—C7 | 1.391 (4) |
| S2—C15 | 1.805 (3) | C6—H6 | 0.9300 |
| S1—C13 | 1.732 (3) | C3—C2 | 1.377 (3) |
| S1—C14 | 1.793 (3) | C3—H3 | 0.9300 |
| N1—C8 | 1.384 (3) | C7—C2 | 1.369 (3) |
| N1—C12 | 1.389 (3) | C10—C9 | 1.434 (3) |
| N1—C4 | 1.446 (3) | C8—C9 | 1.326 (3) |
| O2—C12 | 1.233 (3) | C8—H8 | 0.9300 |
| O1—C10 | 1.240 (3) | C9—H9 | 0.9300 |
| O3—C7 | 1.376 (3) | C2—H2 | 0.9300 |
| O3—C1 | 1.412 (4) | C14—C15 | 1.429 (4) |
| C13—C11 | 1.383 (3) | C14—H14A | 0.9700 |
| C11—C12 | 1.459 (3) | C14—H14B | 0.9700 |
| C11—C10 | 1.466 (3) | C15—H15A | 0.9700 |
| C4—C3 | 1.366 (3) | C15—H15B | 0.9700 |
| C4—C5 | 1.376 (3) | C1—H1A | 0.9600 |
| C5—C6 | 1.371 (4) | C1—H1B | 0.9600 |
| C5—H5 | 0.9300 | C1—H1C | 0.9600 |
| C13—S2—C15 | 95.41 (12) | O1—C10—C9 | 122.5 (2) |
| C13—S1—C14 | 96.14 (12) | O1—C10—C11 | 121.6 (2) |
| C8—N1—C12 | 121.5 (2) | C9—C10—C11 | 116.0 (2) |
| C8—N1—C4 | 119.61 (19) | C9—C8—N1 | 123.4 (2) |
| C12—N1—C4 | 118.88 (19) | C9—C8—H8 | 118.3 |
| C7—O3—C1 | 117.8 (2) | N1—C8—H8 | 118.3 |
| C11—C13—S1 | 121.55 (18) | C8—C9—C10 | 121.5 (2) |
| C11—C13—S2 | 123.24 (18) | C8—C9—H9 | 119.3 |
| S1—C13—S2 | 115.21 (13) | C10—C9—H9 | 119.3 |
| C13—C11—C12 | 118.8 (2) | C7—C2—C3 | 120.0 (2) |
| C13—C11—C10 | 120.5 (2) | C7—C2—H2 | 120.0 |
| C12—C11—C10 | 120.8 (2) | C3—C2—H2 | 120.0 |
| C3—C4—C5 | 120.0 (2) | C15—C14—S1 | 110.6 (2) |
| C3—C4—N1 | 119.8 (2) | C15—C14—H14A | 109.5 |
| C5—C4—N1 | 120.3 (2) | S1—C14—H14A | 109.5 |
| O2—C12—N1 | 119.6 (2) | C15—C14—H14B | 109.5 |
| O2—C12—C11 | 123.5 (2) | S1—C14—H14B | 109.5 |
| N1—C12—C11 | 116.9 (2) | H14A—C14—H14B | 108.1 |
| C6—C5—C4 | 119.6 (2) | C14—C15—S2 | 111.8 (2) |
| C6—C5—H5 | 120.2 | C14—C15—H15A | 109.3 |
| C4—C5—H5 | 120.2 | S2—C15—H15A | 109.3 |
| C5—C6—C7 | 120.6 (2) | C14—C15—H15B | 109.3 |
| C5—C6—H6 | 119.7 | S2—C15—H15B | 109.3 |
| C7—C6—H6 | 119.7 | H15A—C15—H15B | 107.9 |
| C4—C3—C2 | 120.6 (2) | O3—C1—H1A | 109.5 |
| C4—C3—H3 | 119.7 | O3—C1—H1B | 109.5 |
| C2—C3—H3 | 119.7 | H1A—C1—H1B | 109.5 |
| C2—C7—O3 | 125.1 (3) | O3—C1—H1C | 109.5 |
| C2—C7—C6 | 119.2 (2) | H1A—C1—H1C | 109.5 |
| O3—C7—C6 | 115.8 (2) | H1B—C1—H1C | 109.5 |
Hydrogen-bond geometry (Å, °)
| D—H···A | D—H | H···A | D···A | D—H···A |
| C8—H8···O2i | 0.93 | 2.42 | 3.259 (3) | 150 |
| C14—H14a···O1ii | 0.97 | 2.685 | 3.475 (4) | 139 |
| C14—H14b···O1iii | 0.97 | 2.709 | 3.513 (4) | 141 |
Symmetry codes: (i) x+1/2, −y+1/2, z−1/2; (ii) x−1, y, z; (iii) −x+1, −y, −z+2.
Footnotes
Supplementary data and figures for this paper are available from the IUCr electronic archives (Reference: FF2024).
References
- Bruker (2002). APEX2, SAINT and SADABS Bruker AXS Inc., Madison, Wisconsin, USA.
- Kim, K. S., Zhang, L., Schmidt, R., Cai, Z. W., Wei, D., Williams, D. K., Lombardo, L. J., Trainor, G. L., Xie, D., Zhang, Y., An, Y., Sack, J. S., Tokarski, J. S., Darienzo, C., Kamath, A., Marathe, P., Zhang, Y., Lippy, J., Jeyaseelan, R. S., Wautlet, B., Henley, B., Gullo-Brown, J., Manne, V., Hunt, J. T., Fargnoli, J. & Borzilleri, R. M. (2008). J. Med. Chem. 51, 5330–5341. [DOI] [PubMed]
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Associated Data
This section collects any data citations, data availability statements, or supplementary materials included in this article.
Supplementary Materials
Crystal structure: contains datablock(s) global, I. DOI: 10.1107/S1600536811033009/ff2024sup1.cif
Structure factors: contains datablock(s) I. DOI: 10.1107/S1600536811033009/ff2024Isup2.hkl
Supplementary material file. DOI: 10.1107/S1600536811033009/ff2024Isup3.cml
Additional supplementary materials: crystallographic information; 3D view; checkCIF report

