Abstract
The crystal structure of the title compound, C6H7NO, is stabilized by intermolecular N—H⋯O hydrogen bonds, resulting in inversion dimers. The structure is further consolidated by weak C—H⋯O hydrogen bonds.
Related literature
For related structures, see: Boris-Marko et al. (2008 ▶); Vovk et al. (2003 ▶).
Experimental
Crystal data
C6H7NO
M r = 109.13
Monoclinic,
a = 12.965 (3) Å
b = 9.7154 (19) Å
c = 10.908 (2) Å
β = 118.96 (3)°
V = 1202.3 (4) Å3
Z = 8
Mo Kα radiation
μ = 0.08 mm−1
T = 293 K
0.30 × 0.23 × 0.20 mm
Data collection
Rigaku SCXmini diffractometer
Absorption correction: multi-scan (CrystalClear; Rigaku, 2005 ▶) T min = 0.977, T max = 0.984
5961 measured reflections
1369 independent reflections
670 reflections with I > 2σ(I)
R int = 0.049
Refinement
R[F 2 > 2σ(F 2)] = 0.054
wR(F 2) = 0.163
S = 0.99
1369 reflections
73 parameters
H-atom parameters constrained
Δρmax = 0.12 e Å−3
Δρmin = −0.17 e Å−3
Data collection: CrystalClear (Rigaku, 2005 ▶); cell refinement: CrystalClear; data reduction: CrystalClear; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: DIAMOND (Brandenburg & Putz, 2005 ▶); software used to prepare material for publication: SHELXL97.
Supplementary Material
Crystal structure: contains datablock(s) I, global. DOI: 10.1107/S1600536811033484/pv2442sup1.cif
Structure factors: contains datablock(s) I. DOI: 10.1107/S1600536811033484/pv2442Isup2.hkl
Supplementary material file. DOI: 10.1107/S1600536811033484/pv2442Isup3.cml
Additional supplementary materials: crystallographic information; 3D view; checkCIF report
Table 1. Hydrogen-bond geometry (Å, °).
| D—H⋯A | D—H | H⋯A | D⋯A | D—H⋯A |
|---|---|---|---|---|
| N1—H1A⋯O1i | 0.86 | 1.94 | 2.800 (2) | 173 |
| C3—H3A⋯O1ii | 0.93 | 2.46 | 3.334 (3) | 157 |
| C5—H5A⋯O1iii | 0.93 | 2.33 | 3.260 (3) | 178 |
Symmetry codes: (i)
; (ii)
; (iii)
.
Acknowledgments
This work was supported by the National Natural Science Foundation of China (Project 20671019)
supplementary crystallographic information
Comment
The title compound is characterized by an enol-keto tautomerism due to the labile hydrogen atom of OH-group in α-position to the basic pyridine N atom which can easily migrate to N atom (Boris-Marko et al., 2008) resulting in a zwitterionic molecule (Fig. 1).
The O1 and C6 atoms located on the pyridine ring are conplanar with the ring, deviating by 0.0.15 (3) and 0.35 (4) Å, respectively, from the ring plane, The crystal structure is stabilized by intermolecular N—H···O hydrogen bonds and further consolidated by C—H···O interactions (Fig.e 2 and Tab. 1).
Experimental
To a solution of the title compounde (0.2 g) in acetone (2 ml) and ethanol (10 ml) was added was prepared by stirred at room temperature and then placed in a dark place. Colourless single crystals suitable for X-ray diffraction study were obtained by slow evaporation of the solution over a period of 8 d.
Refinement
Positional parameters of all H atoms were calculated geometrically and refined using a riding model, with N–H = 0.086 Å and C—H = 0.93 and 0,96 Å for aryl and methyl type H-atoms, respectively, and Uiso(H) = 1.2 Ueq (N/C-aryl) or 1.5 Ueq (C-methyl).
Figures
Fig. 1.
An ORTEP view of the title compound with the atom-numbering scheme. Displacement ellipsoids are drawn at the 30% probability level.
Fig. 2.
Unit cell packing of the title compound showing H-bonding interactions.
Crystal data
| C6H7NO | F(000) = 464 |
| Mr = 109.13 | Dx = 1.206 Mg m−3 |
| Monoclinic, C2/c | Mo Kα radiation, λ = 0.71073 Å |
| Hall symbol: -C 2yc | Cell parameters from 1369 reflections |
| a = 12.965 (3) Å | θ = 3.6–27.5° |
| b = 9.7154 (19) Å | µ = 0.08 mm−1 |
| c = 10.908 (2) Å | T = 293 K |
| β = 118.96 (3)° | Prism, colourless |
| V = 1202.3 (4) Å3 | 0.30 × 0.23 × 0.20 mm |
| Z = 8 |
Data collection
| Rigaku SCXmini diffractometer | 1369 independent reflections |
| Radiation source: fine-focus sealed tube | 670 reflections with I > 2σ(I) |
| graphite | Rint = 0.049 |
| Detector resolution: 13.6612 pixels mm-1 | θmax = 27.5°, θmin = 3.6° |
| CCD_Profile_fitting scans | h = −16→16 |
| Absorption correction: multi-scan (CrystalClear; Rigaku, 2005) | k = −12→12 |
| Tmin = 0.977, Tmax = 0.984 | l = −14→14 |
| 5961 measured reflections |
Refinement
| Refinement on F2 | Primary atom site location: structure-invariant direct methods |
| Least-squares matrix: full | Secondary atom site location: difference Fourier map |
| R[F2 > 2σ(F2)] = 0.054 | Hydrogen site location: inferred from neighbouring sites |
| wR(F2) = 0.163 | H-atom parameters constrained |
| S = 0.99 | w = 1/[σ2(Fo2) + (0.0734P)2] where P = (Fo2 + 2Fc2)/3 |
| 1369 reflections | (Δ/σ)max < 0.001 |
| 73 parameters | Δρmax = 0.12 e Å−3 |
| 0 restraints | Δρmin = −0.17 e Å−3 |
Special details
| Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
| Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger. |
Fractional atomic coordinates and isotropic or equivalent isotropic displacement parameters (Å2)
| x | y | z | Uiso*/Ueq | ||
| N1 | 0.28530 (13) | 0.79540 (16) | 0.17990 (16) | 0.0616 (5) | |
| H1A | 0.3148 | 0.7521 | 0.1353 | 0.074* | |
| O1 | 0.11700 (11) | 0.82537 (15) | −0.02634 (14) | 0.0730 (5) | |
| C1 | 0.17371 (17) | 0.8437 (2) | 0.1049 (2) | 0.0600 (6) | |
| C2 | 0.13100 (19) | 0.9133 (2) | 0.1852 (2) | 0.0718 (7) | |
| H2A | 0.0549 | 0.9488 | 0.1410 | 0.086* | |
| C5 | 0.35432 (18) | 0.8107 (2) | 0.3216 (2) | 0.0672 (6) | |
| H5A | 0.4300 | 0.7740 | 0.3655 | 0.081* | |
| C4 | 0.3147 (2) | 0.8781 (2) | 0.3988 (2) | 0.0665 (6) | |
| C3 | 0.1989 (2) | 0.9291 (2) | 0.3250 (2) | 0.0750 (7) | |
| H3A | 0.1679 | 0.9755 | 0.3743 | 0.090* | |
| C6 | 0.3897 (2) | 0.8989 (2) | 0.5532 (3) | 0.0978 (9) | |
| H6A | 0.4652 | 0.8566 | 0.5840 | 0.147* | |
| H6B | 0.3520 | 0.8578 | 0.6013 | 0.147* | |
| H6C | 0.4000 | 0.9956 | 0.5734 | 0.147* |
Atomic displacement parameters (Å2)
| U11 | U22 | U33 | U12 | U13 | U23 | |
| N1 | 0.0493 (10) | 0.0718 (12) | 0.0626 (11) | 0.0060 (8) | 0.0263 (9) | −0.0035 (8) |
| O1 | 0.0544 (9) | 0.1007 (12) | 0.0615 (11) | 0.0047 (7) | 0.0262 (8) | 0.0016 (8) |
| C1 | 0.0469 (12) | 0.0662 (13) | 0.0683 (15) | 0.0002 (9) | 0.0290 (12) | 0.0079 (11) |
| C2 | 0.0635 (13) | 0.0820 (16) | 0.0773 (17) | 0.0145 (11) | 0.0401 (14) | 0.0034 (12) |
| C5 | 0.0574 (13) | 0.0666 (14) | 0.0704 (15) | −0.0003 (10) | 0.0252 (12) | −0.0006 (11) |
| C4 | 0.0713 (15) | 0.0644 (14) | 0.0624 (15) | −0.0024 (11) | 0.0312 (13) | −0.0048 (11) |
| C3 | 0.0834 (17) | 0.0739 (15) | 0.0807 (18) | 0.0098 (12) | 0.0500 (15) | −0.0020 (12) |
| C6 | 0.109 (2) | 0.102 (2) | 0.0722 (18) | −0.0037 (14) | 0.0354 (17) | −0.0110 (13) |
Geometric parameters (Å, °)
| N1—C1 | 1.355 (2) | C5—H5A | 0.9300 |
| N1—C5 | 1.368 (2) | C4—C3 | 1.406 (3) |
| N1—H1A | 0.8600 | C4—C6 | 1.496 (3) |
| O1—C1 | 1.266 (2) | C3—H3A | 0.9300 |
| C1—C2 | 1.414 (3) | C6—H6A | 0.9600 |
| C2—C3 | 1.351 (3) | C6—H6B | 0.9600 |
| C2—H2A | 0.9300 | C6—H6C | 0.9600 |
| C5—C4 | 1.350 (3) | ||
| C1—N1—C5 | 124.56 (18) | C5—C4—C3 | 115.9 (2) |
| C1—N1—H1A | 117.7 | C5—C4—C6 | 122.1 (2) |
| C5—N1—H1A | 117.7 | C3—C4—C6 | 122.0 (2) |
| O1—C1—N1 | 119.97 (19) | C2—C3—C4 | 122.6 (2) |
| O1—C1—C2 | 125.48 (19) | C2—C3—H3A | 118.7 |
| N1—C1—C2 | 114.55 (19) | C4—C3—H3A | 118.7 |
| C3—C2—C1 | 121.1 (2) | C4—C6—H6A | 109.5 |
| C3—C2—H2A | 119.4 | C4—C6—H6B | 109.5 |
| C1—C2—H2A | 119.4 | H6A—C6—H6B | 109.5 |
| C4—C5—N1 | 121.30 (19) | C4—C6—H6C | 109.5 |
| C4—C5—H5A | 119.3 | H6A—C6—H6C | 109.5 |
| N1—C5—H5A | 119.3 | H6B—C6—H6C | 109.5 |
Hydrogen-bond geometry (Å, °)
| D—H···A | D—H | H···A | D···A | D—H···A |
| N1—H1A···O1i | 0.86 | 1.94 | 2.800 (2) | 173 |
| C3—H3A···O1ii | 0.93 | 2.46 | 3.334 (3) | 157 |
| C5—H5A···O1iii | 0.93 | 2.33 | 3.260 (3) | 178 |
Symmetry codes: (i) −x+1/2, −y+3/2, −z; (ii) x, −y+2, z+1/2; (iii) x+1/2, −y+3/2, z+1/2.
Footnotes
Supplementary data and figures for this paper are available from the IUCr electronic archives (Reference: PV2442).
References
- Boris-Marko, K., Popović, Z., Pavlović, G. & Rajić-Linarić, M. (2008). J. Mol. Struct. 882, 47–55.
- Brandenburg, K. & Putz, H. (2005). DIAMOND Crystal Impact. GbR, Bonn, Germany.
- Rigaku (2005). CrystalClear Rigaku Corporation, Tokyo, Japan.
- Sheldrick, G. M. (2008). Acta Cryst. A64, 112–122. [DOI] [PubMed]
- Vovk, T. V., Kovalchukova, O. V., Zaitsev, B. E., Strashnova, S. B., Belskii, V. K. & Stash, A. L. (2003). Koord. Khim. 29, 312–314.
Associated Data
This section collects any data citations, data availability statements, or supplementary materials included in this article.
Supplementary Materials
Crystal structure: contains datablock(s) I, global. DOI: 10.1107/S1600536811033484/pv2442sup1.cif
Structure factors: contains datablock(s) I. DOI: 10.1107/S1600536811033484/pv2442Isup2.hkl
Supplementary material file. DOI: 10.1107/S1600536811033484/pv2442Isup3.cml
Additional supplementary materials: crystallographic information; 3D view; checkCIF report


