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Acta Crystallographica Section E: Structure Reports Online logoLink to Acta Crystallographica Section E: Structure Reports Online
. 2011 Aug 27;67(Pt 9):o2492. doi: 10.1107/S1600536811034611

N-(4-Chloro­phen­yl)morpholine-4-carboxamide

Yu-Feng Li a,*
PMCID: PMC3200746  PMID: 22059042

Abstract

In the title mol­ecule, C11H13ClN2O2, the morpholine ring has a chair conformation. In the crystal, mol­ecules are linked into chains along [100] by N—H⋯O hydrogen bonds.

Related literature

For the applications of morpholine compounds, see: Arrieta et al. (2007). For related structures, see: Li (2011a ,b ).graphic file with name e-67-o2492-scheme1.jpg

Experimental

Crystal data

  • C11H13ClN2O2

  • M r = 240.68

  • Orthorhombic, Inline graphic

  • a = 9.3359 (19) Å

  • b = 11.105 (2) Å

  • c = 22.426 (5) Å

  • V = 2325.0 (8) Å3

  • Z = 8

  • Mo Kα radiation

  • μ = 0.32 mm−1

  • T = 293 K

  • 0.26 × 0.19 × 0.18 mm

Data collection

  • Bruker SMART CCD diffractometer

  • 20865 measured reflections

  • 2660 independent reflections

  • 2081 reflections with I > 2σ(I)

  • R int = 0.059

Refinement

  • R[F 2 > 2σ(F 2)] = 0.044

  • wR(F 2) = 0.124

  • S = 1.07

  • 2660 reflections

  • 149 parameters

  • H atoms treated by a mixture of independent and constrained refinement

  • Δρmax = 0.40 e Å−3

  • Δρmin = −0.29 e Å−3

Data collection: SMART (Bruker, 1997); cell refinement: SAINT (Bruker, 1997); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: SHELXTL (Sheldrick, 2008); software used to prepare material for publication: SHELXTL.

Supplementary Material

Crystal structure: contains datablock(s) global, I. DOI: 10.1107/S1600536811034611/lh5309sup1.cif

e-67-o2492-sup1.cif (16.1KB, cif)

Structure factors: contains datablock(s) I. DOI: 10.1107/S1600536811034611/lh5309Isup2.hkl

e-67-o2492-Isup2.hkl (130.7KB, hkl)

Supplementary material file. DOI: 10.1107/S1600536811034611/lh5309Isup3.cml

Additional supplementary materials: crystallographic information; 3D view; checkCIF report

Table 1. Hydrogen-bond geometry (Å, °).

D—H⋯A D—H H⋯A DA D—H⋯A
N2—H1N⋯O2i 0.838 (19) 2.114 (19) 2.9226 (19) 162.2 (19)

Symmetry code: (i) Inline graphic.

supplementary crystallographic information

Comment

Morpholine compounds are an important intermediate reagent in organic synthesis (Arrieta et al., 2007). As part of our search for new carboxamide compounds (Li, 2011a,b) we have determined the crystal structure of the title compound containing a morpholine ring. The molecular structure of the title compound is shown in Fig. 1. The morpholine ring (N1/C1/C2/C3/C4/O1) is in a chair conformation. In the crystal, molecules are linked into chains along [100] by N—H···O hydrogen bonds.

Experimental

A mixture of morpholine (0.1 mol), and (4-chlorophenyl)carbamic chloride (0.1 mol) was stirred in refluxing ethanol (20 ml) for 4 h to afford the title compound (0.065 mol, yield 65%). Colourless blocks of the title compound were obtained by recrystallization from ethanol at room temperature.

Refinement

H atoms were fixed geometrically and allowed to ride on their attached atoms, with C—H distances = 0.93–0.97 Å and with Uiso(H) = 1.2Ueq(C). The H atom bonded to N2 was refined independently with an isotropic displacement parameter.

Figures

Fig. 1.

Fig. 1.

The molecular structure of the title compound showing 30% probability displacement ellipsoids.

Crystal data

C11H13ClN2O2 F(000) = 1008
Mr = 240.68 Dx = 1.375 Mg m3
Orthorhombic, Pbca Mo Kα radiation, λ = 0.71073 Å
Hall symbol: -P 2ac 2ab Cell parameters from 2081 reflections
a = 9.3359 (19) Å θ = 2.6–27.4°
b = 11.105 (2) Å µ = 0.32 mm1
c = 22.426 (5) Å T = 293 K
V = 2325.0 (8) Å3 Block, colorless
Z = 8 0.26 × 0.19 × 0.18 mm

Data collection

Bruker SMART CCD diffractometer 2081 reflections with I > 2σ(I)
Radiation source: fine-focus sealed tube Rint = 0.059
graphite θmax = 27.5°, θmin = 3.0°
φ and ω scans h = −11→12
20865 measured reflections k = −14→14
2660 independent reflections l = −29→29

Refinement

Refinement on F2 Primary atom site location: structure-invariant direct methods
Least-squares matrix: full Secondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.044 Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.124 H atoms treated by a mixture of independent and constrained refinement
S = 1.07 w = 1/[σ2(Fo2) + (0.0583P)2 + 0.5192P] where P = (Fo2 + 2Fc2)/3
2660 reflections (Δ/σ)max < 0.001
149 parameters Δρmax = 0.40 e Å3
0 restraints Δρmin = −0.29 e Å3

Special details

Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.

Fractional atomic coordinates and isotropic or equivalent isotropic displacement parameters (Å2)

x y z Uiso*/Ueq
Cl1 0.12457 (6) 0.60377 (5) 0.44436 (2) 0.0656 (2)
O1 0.41840 (19) 0.16232 (19) 0.04233 (6) 0.0854 (6)
O2 0.14298 (12) 0.24548 (12) 0.21323 (5) 0.0505 (3)
N1 0.34301 (15) 0.19345 (14) 0.16222 (6) 0.0473 (4)
N2 0.35998 (15) 0.31812 (13) 0.24422 (6) 0.0407 (3)
C1 0.2740 (3) 0.1513 (3) 0.06064 (9) 0.0782 (7)
H1A 0.2252 0.0940 0.0351 0.094*
H1B 0.2264 0.2285 0.0567 0.094*
C2 0.2651 (2) 0.1097 (2) 0.12415 (8) 0.0598 (5)
H2B 0.1657 0.1058 0.1365 0.072*
H2C 0.3061 0.0298 0.1277 0.072*
C3 0.48960 (18) 0.21365 (17) 0.14282 (7) 0.0477 (4)
H3A 0.5456 0.1411 0.1489 0.057*
H3B 0.5322 0.2777 0.1663 0.057*
C4 0.4918 (2) 0.2472 (2) 0.07824 (9) 0.0695 (6)
H4A 0.4477 0.3257 0.0733 0.083*
H4B 0.5903 0.2531 0.0649 0.083*
C5 0.27454 (16) 0.25192 (14) 0.20668 (7) 0.0377 (3)
C6 0.30274 (16) 0.38724 (13) 0.29171 (7) 0.0370 (3)
C7 0.36139 (17) 0.37550 (15) 0.34817 (7) 0.0416 (4)
H7A 0.4372 0.3226 0.3545 0.050*
C8 0.30729 (19) 0.44249 (15) 0.39539 (7) 0.0452 (4)
H8A 0.3465 0.4350 0.4333 0.054*
C9 0.19474 (19) 0.52025 (14) 0.38526 (7) 0.0450 (4)
C10 0.13723 (18) 0.53487 (15) 0.32897 (8) 0.0459 (4)
H10A 0.0626 0.5888 0.3226 0.055*
C11 0.19215 (18) 0.46827 (14) 0.28228 (7) 0.0426 (4)
H11A 0.1546 0.4779 0.2442 0.051*
H1N 0.445 (2) 0.2955 (18) 0.2483 (9) 0.052 (5)*

Atomic displacement parameters (Å2)

U11 U22 U33 U12 U13 U23
Cl1 0.0811 (4) 0.0609 (3) 0.0549 (3) 0.0125 (2) 0.0184 (2) −0.0133 (2)
O1 0.0807 (11) 0.1309 (16) 0.0446 (7) −0.0306 (11) 0.0110 (8) −0.0221 (8)
O2 0.0341 (6) 0.0664 (8) 0.0511 (7) −0.0016 (5) 0.0026 (5) −0.0106 (5)
N1 0.0405 (7) 0.0582 (9) 0.0432 (7) −0.0077 (6) 0.0057 (6) −0.0150 (6)
N2 0.0347 (7) 0.0469 (8) 0.0404 (7) 0.0043 (6) 0.0000 (6) −0.0087 (6)
C1 0.0687 (14) 0.115 (2) 0.0509 (12) −0.0185 (14) −0.0091 (11) −0.0168 (12)
C2 0.0559 (11) 0.0712 (13) 0.0522 (10) −0.0190 (9) 0.0065 (9) −0.0229 (9)
C3 0.0364 (8) 0.0592 (10) 0.0475 (9) 0.0008 (7) 0.0050 (7) −0.0114 (8)
C4 0.0668 (13) 0.0873 (16) 0.0543 (11) −0.0210 (12) 0.0089 (11) −0.0037 (10)
C5 0.0346 (8) 0.0410 (8) 0.0375 (8) 0.0013 (6) 0.0002 (6) 0.0008 (6)
C6 0.0376 (8) 0.0342 (8) 0.0391 (8) −0.0014 (6) 0.0045 (6) −0.0013 (6)
C7 0.0441 (9) 0.0378 (8) 0.0429 (9) 0.0044 (6) −0.0011 (7) −0.0006 (6)
C8 0.0537 (10) 0.0437 (9) 0.0383 (8) −0.0004 (7) 0.0031 (7) 0.0000 (7)
C9 0.0537 (9) 0.0356 (8) 0.0457 (9) −0.0019 (7) 0.0134 (8) −0.0036 (6)
C10 0.0488 (9) 0.0354 (8) 0.0534 (10) 0.0062 (7) 0.0072 (8) 0.0019 (7)
C11 0.0475 (9) 0.0380 (8) 0.0422 (8) 0.0033 (7) 0.0007 (7) 0.0035 (6)

Geometric parameters (Å, °)

Cl1—C9 1.7452 (16) C3—C4 1.496 (3)
O1—C1 1.415 (3) C3—H3A 0.9700
O1—C4 1.417 (3) C3—H3B 0.9700
O2—C5 1.2390 (19) C4—H4A 0.9700
N1—C5 1.351 (2) C4—H4B 0.9700
N1—C3 1.453 (2) C6—C7 1.385 (2)
N1—C2 1.457 (2) C6—C11 1.386 (2)
N2—C5 1.373 (2) C7—C8 1.389 (2)
N2—C6 1.4175 (19) C7—H7A 0.9300
N2—H1N 0.84 (2) C8—C9 1.379 (2)
C1—C2 1.499 (3) C8—H8A 0.9300
C1—H1A 0.9700 C9—C10 1.381 (3)
C1—H1B 0.9700 C10—C11 1.381 (2)
C2—H2B 0.9700 C10—H10A 0.9300
C2—H2C 0.9700 C11—H11A 0.9300
C1—O1—C4 110.71 (16) O1—C4—H4A 109.2
C5—N1—C3 126.33 (14) C3—C4—H4A 109.2
C5—N1—C2 120.22 (14) O1—C4—H4B 109.2
C3—N1—C2 113.14 (13) C3—C4—H4B 109.2
C5—N2—C6 122.11 (14) H4A—C4—H4B 107.9
C5—N2—H1N 117.2 (13) O2—C5—N1 121.93 (14)
C6—N2—H1N 116.0 (13) O2—C5—N2 122.28 (14)
O1—C1—C2 110.80 (19) N1—C5—N2 115.78 (13)
O1—C1—H1A 109.5 C7—C6—C11 119.67 (15)
C2—C1—H1A 109.5 C7—C6—N2 119.12 (14)
O1—C1—H1B 109.5 C11—C6—N2 121.19 (14)
C2—C1—H1B 109.5 C6—C7—C8 120.16 (15)
H1A—C1—H1B 108.1 C6—C7—H7A 119.9
N1—C2—C1 109.42 (17) C8—C7—H7A 119.9
N1—C2—H2B 109.8 C9—C8—C7 119.14 (16)
C1—C2—H2B 109.8 C9—C8—H8A 120.4
N1—C2—H2C 109.8 C7—C8—H8A 120.4
C1—C2—H2C 109.8 C8—C9—C10 121.34 (15)
H2B—C2—H2C 108.2 C8—C9—Cl1 119.59 (14)
N1—C3—C4 109.94 (15) C10—C9—Cl1 119.06 (14)
N1—C3—H3A 109.7 C11—C10—C9 119.06 (16)
C4—C3—H3A 109.7 C11—C10—H10A 120.5
N1—C3—H3B 109.7 C9—C10—H10A 120.5
C4—C3—H3B 109.7 C10—C11—C6 120.59 (16)
H3A—C3—H3B 108.2 C10—C11—H11A 119.7
O1—C4—C3 112.21 (18) C6—C11—H11A 119.7
C4—O1—C1—C2 −60.2 (3) C6—N2—C5—N1 177.97 (15)
C5—N1—C2—C1 120.4 (2) C5—N2—C6—C7 130.52 (17)
C3—N1—C2—C1 −53.6 (2) C5—N2—C6—C11 −51.2 (2)
O1—C1—C2—N1 57.1 (3) C11—C6—C7—C8 1.6 (2)
C5—N1—C3—C4 −121.82 (19) N2—C6—C7—C8 179.86 (15)
C2—N1—C3—C4 51.7 (2) C6—C7—C8—C9 0.1 (2)
C1—O1—C4—C3 58.8 (3) C7—C8—C9—C10 −1.6 (3)
N1—C3—C4—O1 −53.6 (2) C7—C8—C9—Cl1 179.34 (13)
C3—N1—C5—O2 166.36 (17) C8—C9—C10—C11 1.3 (3)
C2—N1—C5—O2 −6.8 (3) Cl1—C9—C10—C11 −179.61 (13)
C3—N1—C5—N2 −14.0 (2) C9—C10—C11—C6 0.4 (3)
C2—N1—C5—N2 172.86 (16) C7—C6—C11—C10 −1.8 (2)
C6—N2—C5—O2 −2.4 (2) N2—C6—C11—C10 179.88 (15)

Hydrogen-bond geometry (Å, °)

D—H···A D—H H···A D···A D—H···A
N2—H1N···O2i 0.838 (19) 2.114 (19) 2.9226 (19) 162.2 (19)

Symmetry codes: (i) x+1/2, y, −z+1/2.

Footnotes

Supplementary data and figures for this paper are available from the IUCr electronic archives (Reference: LH5309).

References

  1. Arrieta, A., Otaegui, D., Zubia, A., Cossío, F. P., Díaz-Ortiz, A., Hoz, A., Herrero, A., Prieto, P., Foces-Foces, C., Pizarro, J. L. & Arriortua, M. I. (2007). J. Org. Chem. 72, 4313–4322. [DOI] [PubMed]
  2. Bruker (1997). SMART and SAINT Bruker AXS Inc., Madison, Wisconsin, USA.
  3. Li, Y.-F. (2011a). Acta Cryst. E67, o1796. [DOI] [PMC free article] [PubMed]
  4. Li, Y.-F. (2011b). Acta Cryst. E67, o1792. [DOI] [PMC free article] [PubMed]
  5. Sheldrick, G. M. (2008). Acta Cryst. A64, 112–122. [DOI] [PubMed]

Associated Data

This section collects any data citations, data availability statements, or supplementary materials included in this article.

Supplementary Materials

Crystal structure: contains datablock(s) global, I. DOI: 10.1107/S1600536811034611/lh5309sup1.cif

e-67-o2492-sup1.cif (16.1KB, cif)

Structure factors: contains datablock(s) I. DOI: 10.1107/S1600536811034611/lh5309Isup2.hkl

e-67-o2492-Isup2.hkl (130.7KB, hkl)

Supplementary material file. DOI: 10.1107/S1600536811034611/lh5309Isup3.cml

Additional supplementary materials: crystallographic information; 3D view; checkCIF report


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