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Acta Crystallographica Section E: Structure Reports Online logoLink to Acta Crystallographica Section E: Structure Reports Online
. 2011 Aug 31;67(Pt 9):o2523. doi: 10.1107/S1600536811034465

rac-Phenyl (benzylamido)(p-tolyl­amido)­phosphinate

Mehrdad Pourayoubi a,*, Fatemeh Karimi Ahmadabad a, Marek Nečas b
PMCID: PMC3200931  PMID: 22059060

Abstract

The title compound, C20H21N2O2P, was synthesized from (RS)-(C6H5O)P(O)Cl(NHC6H4-p-CH3) and benzyl­amine. The product crystallizes as a racemate in a polar space group. The phospho­rus atom has a distorted tetra­hedral configuration: the bond angles at the P atom are in the range 103.2 (1)–118.4 (1)°. The P—N(benzyl­amido) bond [1.615 (2) Å] is slightly shorter than the P—N(p-tolyl­amido) bond [1.630 (2) Å]. Both N—H groups adopt an anti orientation relative to the phosphoryl group. In the crystal, the adjacent mol­ecules are linked via N—H⋯O hydrogen bonds, forming R 2 2(8) rings, into a one-dimensional arrangement parallel to the x axis.

Related literature

For a related mixed-amido phosphinate derivative and its mol­ecular geometry, see: Sabbaghi et al. (2011). For graph-set notation, see: Bernstein et al. (1995).graphic file with name e-67-o2523-scheme1.jpg

Experimental

Crystal data

  • C20H21N2O2P

  • M r = 352.36

  • Orthorhombic, Inline graphic

  • a = 9.6986 (5) Å

  • b = 13.0751 (6) Å

  • c = 14.3446 (5) Å

  • V = 1819.04 (14) Å3

  • Z = 4

  • Mo Kα radiation

  • μ = 0.17 mm−1

  • T = 120 K

  • 0.30 × 0.30 × 0.10 mm

Data collection

  • Xcalibur, Sapphire2, large Be window diffractometer

  • Absorption correction: multi-scan (CrysAlis PRO; Oxford Diffraction, 2009) T min = 0.785, T max = 1.000

  • 20413 measured reflections

  • 3200 independent reflections

  • 2823 reflections with I > 2σ(I)

  • R int = 0.047

Refinement

  • R[F 2 > 2σ(F 2)] = 0.041

  • wR(F 2) = 0.099

  • S = 1.00

  • 3200 reflections

  • 233 parameters

  • 1 restraint

  • H atoms treated by a mixture of independent and constrained refinement

  • Δρmax = 0.51 e Å−3

  • Δρmin = −0.29 e Å−3

  • Absolute structure: Flack (1983), 1526 Friedel pairs

  • Flack parameter: 0.01 (10)

Data collection: CrysAlis PRO (Oxford Diffraction, 2009); cell refinement: CrysAlis PRO; data reduction: CrysAlis PRO; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: Mercury (Macrae et al., 2008); software used to prepare material for publication: enCIFer (Allen et al., 2004).

Supplementary Material

Crystal structure: contains datablock(s) I, global. DOI: 10.1107/S1600536811034465/ld2023sup1.cif

e-67-o2523-sup1.cif (26.6KB, cif)

Structure factors: contains datablock(s) I. DOI: 10.1107/S1600536811034465/ld2023Isup2.hkl

e-67-o2523-Isup2.hkl (157KB, hkl)

Additional supplementary materials: crystallographic information; 3D view; checkCIF report

Table 1. Hydrogen-bond geometry (Å, °).

D—H⋯A D—H H⋯A DA D—H⋯A
N1—H1N⋯O1i 0.76 (3) 2.43 (3) 3.127 (3) 153 (3)
N2—H2N⋯O2i 0.86 (3) 1.91 (3) 2.761 (3) 176 (3)

Symmetry code: (i) Inline graphic.

Acknowledgments

Support of this investigation by Ferdowsi University of Mashhad is gratefully acknowledged.

supplementary crystallographic information

Comment

In continuation of the previous works on synthesis and structure determination of mixed-amido phosphinates with common formula (RO)(NR1R2)(NR3R4)P(O) (Sabbaghi et al., 2011; and the related reference cited therein), the structure of the title molecule, [C6H5O][4-CH3C6H4NH][C6H5CH2NH]PO (Fig. 1), is reported here.

Single crystals were obtained from CHCl3/CH3CN at room temperature.

The P═O (1.4679 (17) Å), P—O (1.6250 (17) Å), P—N (1.615 (2) Å & 1.630 (2) Å) and C—O (1.400 (3) Å) bond lengths and the P—N—C (120.54 (18)° & 125.18 (18)°) and P—O—C (120.90 (14)°) bond angles are within the expected values (Sabbaghi et al., 2011).

The phosphorus atom has a distorted tetrahedral P(═O)(O)(N)(N) environment. The bond angles at the P atom are in the range from 103.17 (9)° [for the O2—P1—O1 angle] to 118.39 (11)° [for the O2—P1—N2 angle].

In the crystal structure, neighbouring molecules are H-bonded via N—H···O(P) hydrogen bonds, building R22(8) rings (Bernstein et al., 1995), in a linear arrangement parallel to [100], Table 1, Fig. 2.

Experimental

To a solution of (C6H5O)(4-CH3C6H4NH)P(O)Cl (2.286 mmol) in chloroform, a solution of benzylamine (4.572 mmol) in chloroform was added at 273 K. After stirring for 5 h, the solvent was removed and the obtained solid was washed with distilled water. Single crystals were obtained from a solution of the title compound in CH3CN/CHCl3 after slow evaporation at room temperature.

Refinement

All carbon-bound H atoms were placed in calculated positions and were refined as riding with their Uiso set to be either 1.2Ueq or 1.5Ueq (methyl) of the respective carrier atoms; in addition, the methyl H atoms were allowed to rotate about the C—C bond. Nitrogen-bound H atoms were located in a difference Fourier map and refined with their Uiso set to 1.2Ueq of the adjacent nitrogen atoms.

Figures

Fig. 1.

Fig. 1.

An ORTEP style plot and atom labeling scheme for the title compound. Displacement ellipsoids are given at 50% probability level and H atoms are drawn as small spheres of an arbitrary radius.

Fig. 2.

Fig. 2.

Part of the crystal packing of the title compound with the hydrogen bonds shown as dotted lines (the C—H hydrogen atoms are omitted for clarity).

Crystal data

C20H21N2O2P Dx = 1.287 Mg m3
Mr = 352.36 Mo Kα radiation, λ = 0.71073 Å
Orthorhombic, Pca21 Cell parameters from 10547 reflections
a = 9.6986 (5) Å θ = 3.0–27.2°
b = 13.0751 (6) Å µ = 0.17 mm1
c = 14.3446 (5) Å T = 120 K
V = 1819.04 (14) Å3 Plate, colorless
Z = 4 0.30 × 0.30 × 0.10 mm
F(000) = 744

Data collection

Xcalibur, Sapphire2, large Be window diffractometer 3200 independent reflections
Radiation source: Enhance (Mo) X-ray Source 2823 reflections with I > 2σ(I)
graphite Rint = 0.047
Detector resolution: 8.4353 pixels mm-1 θmax = 25.0°, θmin = 3.0°
ω scan h = −11→9
Absorption correction: multi-scan (CrysAlis PRO; Oxford Diffraction, 2009) k = −15→15
Tmin = 0.785, Tmax = 1.000 l = −17→17
20413 measured reflections

Refinement

Refinement on F2 Secondary atom site location: difference Fourier map
Least-squares matrix: full Hydrogen site location: inferred from neighbouring sites
R[F2 > 2σ(F2)] = 0.041 H atoms treated by a mixture of independent and constrained refinement
wR(F2) = 0.099 w = 1/[σ2(Fo2) + (0.073P)2] where P = (Fo2 + 2Fc2)/3
S = 1.00 (Δ/σ)max < 0.001
3200 reflections Δρmax = 0.51 e Å3
233 parameters Δρmin = −0.29 e Å3
1 restraint Absolute structure: Flack (1983), 1523 Friedel pairs
Primary atom site location: structure-invariant direct methods Flack parameter: 0.01 (10)

Special details

Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.

Fractional atomic coordinates and isotropic or equivalent isotropic displacement parameters (Å2)

x y z Uiso*/Ueq
P1 0.91905 (5) 0.99930 (4) 0.56899 (5) 0.01847 (16)
O1 0.84602 (16) 1.07673 (12) 0.64256 (11) 0.0217 (4)
O2 0.80162 (17) 0.94641 (13) 0.52605 (12) 0.0247 (4)
N1 1.0250 (2) 0.92421 (16) 0.62255 (15) 0.0241 (5)
H1N 1.098 (3) 0.944 (2) 0.630 (2) 0.029*
N2 1.0197 (2) 1.06729 (15) 0.50236 (15) 0.0217 (5)
H2N 1.107 (3) 1.062 (2) 0.5071 (19) 0.026*
C1 0.9250 (2) 1.1424 (2) 0.69810 (16) 0.0207 (6)
C2 0.9809 (3) 1.1052 (2) 0.78124 (17) 0.0264 (6)
H2C 0.9699 1.0356 0.7987 0.032*
C3 1.0533 (3) 1.1733 (2) 0.83765 (18) 0.0297 (6)
H3A 1.0940 1.1494 0.8938 0.036*
C4 1.0667 (3) 1.2738 (2) 0.81375 (18) 0.0290 (6)
H4A 1.1156 1.3192 0.8535 0.035*
C5 1.0088 (3) 1.3098 (2) 0.73111 (18) 0.0283 (6)
H5A 1.0182 1.3798 0.7143 0.034*
C6 0.9375 (3) 1.2432 (2) 0.67366 (17) 0.0249 (6)
H6A 0.8974 1.2674 0.6174 0.030*
C7 0.9737 (3) 0.83908 (19) 0.67821 (18) 0.0273 (6)
H7A 0.8801 0.8564 0.7006 0.033*
H7B 1.0336 0.8315 0.7337 0.033*
C8 0.9671 (3) 0.73740 (18) 0.62858 (16) 0.0225 (5)
C9 0.8580 (3) 0.6727 (2) 0.6440 (2) 0.0360 (7)
H9A 0.7840 0.6945 0.6826 0.043*
C10 0.8539 (4) 0.5761 (2) 0.6042 (2) 0.0503 (9)
H10A 0.7787 0.5316 0.6167 0.060*
C11 0.9596 (4) 0.5448 (2) 0.54621 (18) 0.0436 (8)
H11A 0.9573 0.4789 0.5184 0.052*
C12 1.0667 (3) 0.6091 (2) 0.52932 (19) 0.0368 (7)
H12A 1.1394 0.5876 0.4895 0.044*
C13 1.0716 (3) 0.70547 (18) 0.5693 (2) 0.0282 (5)
H13A 1.1467 0.7498 0.5561 0.034*
C14 0.9794 (3) 1.15603 (17) 0.45273 (16) 0.0196 (5)
C15 1.0762 (3) 1.23182 (19) 0.43674 (17) 0.0246 (5)
H15A 1.1680 1.2239 0.4588 0.030*
C16 1.0383 (3) 1.3201 (2) 0.38799 (19) 0.0296 (6)
H16A 1.1061 1.3707 0.3753 0.036*
C17 0.9042 (3) 1.33547 (18) 0.35774 (16) 0.0258 (6)
C18 0.8104 (3) 1.25870 (19) 0.37405 (16) 0.0249 (6)
H18A 0.7182 1.2670 0.3530 0.030*
C19 0.8467 (3) 1.16882 (19) 0.42071 (16) 0.0229 (5)
H19A 0.7799 1.1167 0.4303 0.027*
C20 0.8653 (3) 1.4309 (2) 0.3061 (2) 0.0364 (7)
H20A 0.7646 1.4369 0.3040 0.055*
H20B 0.9017 1.4276 0.2424 0.055*
H20C 0.9041 1.4905 0.3381 0.055*

Atomic displacement parameters (Å2)

U11 U22 U33 U12 U13 U23
P1 0.0170 (3) 0.0230 (3) 0.0154 (3) −0.0002 (3) 0.0001 (3) 0.0003 (2)
O1 0.0207 (9) 0.0288 (9) 0.0155 (8) 0.0002 (7) −0.0003 (7) −0.0013 (7)
O2 0.0199 (9) 0.0295 (10) 0.0247 (8) −0.0025 (7) −0.0001 (7) −0.0008 (7)
N1 0.0185 (11) 0.0276 (12) 0.0261 (12) −0.0036 (10) −0.0027 (10) 0.0003 (9)
N2 0.0153 (11) 0.0287 (11) 0.0211 (10) 0.0021 (9) −0.0001 (9) 0.0026 (9)
C1 0.0165 (13) 0.0302 (14) 0.0154 (12) −0.0025 (10) 0.0021 (9) −0.0065 (10)
C2 0.0320 (15) 0.0292 (13) 0.0180 (11) 0.0010 (11) −0.0026 (11) 0.0026 (11)
C3 0.0307 (15) 0.0421 (16) 0.0163 (12) 0.0023 (13) −0.0032 (11) −0.0008 (12)
C4 0.0274 (14) 0.0378 (15) 0.0217 (13) −0.0048 (12) −0.0014 (11) −0.0077 (11)
C5 0.0308 (16) 0.0282 (14) 0.0260 (15) −0.0039 (12) 0.0044 (12) −0.0031 (12)
C6 0.0239 (14) 0.0340 (14) 0.0167 (11) 0.0031 (11) 0.0007 (10) 0.0015 (11)
C7 0.0368 (17) 0.0260 (14) 0.0190 (13) 0.0026 (12) −0.0008 (12) 0.0046 (11)
C8 0.0241 (13) 0.0262 (13) 0.0173 (12) 0.0033 (11) −0.0028 (10) 0.0056 (10)
C9 0.0355 (16) 0.0454 (16) 0.0272 (14) −0.0088 (13) 0.0049 (12) −0.0043 (13)
C10 0.066 (2) 0.0461 (18) 0.0387 (16) −0.0296 (17) 0.0033 (17) −0.0012 (14)
C11 0.083 (2) 0.0280 (14) 0.0199 (14) −0.0073 (16) −0.0028 (14) −0.0025 (11)
C12 0.054 (2) 0.0357 (15) 0.0201 (13) 0.0115 (14) 0.0042 (13) 0.0011 (11)
C13 0.0289 (14) 0.0316 (13) 0.0240 (12) 0.0016 (10) 0.0020 (12) 0.0081 (13)
C14 0.0214 (14) 0.0257 (13) 0.0118 (12) 0.0031 (11) 0.0044 (10) −0.0037 (10)
C15 0.0229 (14) 0.0327 (13) 0.0184 (12) 0.0010 (11) −0.0016 (10) −0.0015 (11)
C16 0.0361 (17) 0.0274 (13) 0.0254 (13) −0.0051 (12) 0.0057 (12) −0.0009 (11)
C17 0.0368 (16) 0.0279 (14) 0.0128 (12) 0.0071 (11) 0.0029 (10) −0.0027 (10)
C18 0.0252 (14) 0.0341 (14) 0.0154 (12) 0.0058 (11) 0.0008 (10) −0.0026 (11)
C19 0.0237 (14) 0.0295 (13) 0.0154 (11) 0.0002 (11) 0.0010 (10) −0.0004 (10)
C20 0.0481 (18) 0.0310 (14) 0.0302 (14) 0.0037 (14) 0.0008 (13) 0.0023 (12)

Geometric parameters (Å, °)

P1—O2 1.4679 (17) C8—C13 1.387 (4)
P1—N1 1.615 (2) C9—C10 1.386 (4)
P1—O1 1.6250 (17) C9—H9A 0.9500
P1—N2 1.630 (2) C10—C11 1.382 (4)
O1—C1 1.400 (3) C10—H10A 0.9500
N1—C7 1.457 (3) C11—C12 1.358 (4)
N1—H1N 0.76 (3) C11—H11A 0.9500
N2—C14 1.416 (3) C12—C13 1.385 (4)
N2—H2N 0.86 (3) C12—H12A 0.9500
C1—C6 1.369 (4) C13—H13A 0.9500
C1—C2 1.398 (4) C14—C19 1.377 (4)
C2—C3 1.393 (4) C14—C15 1.385 (3)
C2—H2C 0.9500 C15—C16 1.399 (4)
C3—C4 1.364 (4) C15—H15A 0.9500
C3—H3A 0.9500 C16—C17 1.386 (4)
C4—C5 1.394 (4) C16—H16A 0.9500
C4—H4A 0.9500 C17—C18 1.375 (4)
C5—C6 1.384 (4) C17—C20 1.499 (3)
C5—H5A 0.9500 C18—C19 1.397 (4)
C6—H6A 0.9500 C18—H18A 0.9500
C7—C8 1.510 (4) C19—H19A 0.9500
C7—H7A 0.9900 C20—H20A 0.9800
C7—H7B 0.9900 C20—H20B 0.9800
C8—C9 1.373 (4) C20—H20C 0.9800
O2—P1—N1 114.00 (11) C8—C9—C10 121.1 (3)
O2—P1—O1 103.17 (9) C8—C9—H9A 119.4
N1—P1—O1 110.30 (11) C10—C9—H9A 119.4
O2—P1—N2 118.39 (11) C11—C10—C9 119.8 (3)
N1—P1—N2 103.28 (11) C11—C10—H10A 120.1
O1—P1—N2 107.58 (10) C9—C10—H10A 120.1
C1—O1—P1 120.90 (14) C12—C11—C10 119.4 (3)
C7—N1—P1 120.54 (18) C12—C11—H11A 120.3
C7—N1—H1N 120 (2) C10—C11—H11A 120.3
P1—N1—H1N 117 (2) C11—C12—C13 121.0 (3)
C14—N2—P1 125.18 (18) C11—C12—H12A 119.5
C14—N2—H2N 112.1 (18) C13—C12—H12A 119.5
P1—N2—H2N 120.5 (19) C12—C13—C8 120.2 (2)
C6—C1—C2 121.3 (2) C12—C13—H13A 119.9
C6—C1—O1 119.6 (2) C8—C13—H13A 119.9
C2—C1—O1 118.9 (2) C19—C14—C15 119.5 (2)
C3—C2—C1 117.9 (2) C19—C14—N2 121.7 (2)
C3—C2—H2C 121.1 C15—C14—N2 118.8 (2)
C1—C2—H2C 121.1 C14—C15—C16 119.7 (2)
C4—C3—C2 121.2 (2) C14—C15—H15A 120.2
C4—C3—H3A 119.4 C16—C15—H15A 120.2
C2—C3—H3A 119.4 C17—C16—C15 121.5 (2)
C3—C4—C5 120.1 (3) C17—C16—H16A 119.2
C3—C4—H4A 120.0 C15—C16—H16A 119.2
C5—C4—H4A 120.0 C18—C17—C16 117.5 (2)
C6—C5—C4 119.7 (2) C18—C17—C20 121.7 (2)
C6—C5—H5A 120.2 C16—C17—C20 120.8 (2)
C4—C5—H5A 120.2 C17—C18—C19 121.9 (2)
C1—C6—C5 119.8 (2) C17—C18—H18A 119.0
C1—C6—H6A 120.1 C19—C18—H18A 119.0
C5—C6—H6A 120.1 C14—C19—C18 119.8 (2)
N1—C7—C8 115.4 (2) C14—C19—H19A 120.1
N1—C7—H7A 108.4 C18—C19—H19A 120.1
C8—C7—H7A 108.4 C17—C20—H20A 109.5
N1—C7—H7B 108.4 C17—C20—H20B 109.5
C8—C7—H7B 108.4 H20A—C20—H20B 109.5
H7A—C7—H7B 107.5 C17—C20—H20C 109.5
C9—C8—C13 118.5 (2) H20A—C20—H20C 109.5
C9—C8—C7 119.9 (2) H20B—C20—H20C 109.5
C13—C8—C7 121.6 (2)
O2—P1—O1—C1 −179.64 (16) N1—C7—C8—C13 41.2 (3)
N1—P1—O1—C1 58.23 (19) C13—C8—C9—C10 2.3 (4)
N2—P1—O1—C1 −53.74 (19) C7—C8—C9—C10 −175.7 (3)
O2—P1—N1—C7 −40.2 (2) C8—C9—C10—C11 −1.5 (5)
O1—P1—N1—C7 75.3 (2) C9—C10—C11—C12 0.3 (5)
N2—P1—N1—C7 −169.97 (18) C10—C11—C12—C13 0.0 (4)
O2—P1—N2—C14 64.2 (2) C11—C12—C13—C8 0.8 (4)
N1—P1—N2—C14 −168.78 (18) C9—C8—C13—C12 −1.9 (4)
O1—P1—N2—C14 −52.1 (2) C7—C8—C13—C12 176.0 (2)
P1—O1—C1—C6 100.9 (2) P1—N2—C14—C19 −30.3 (3)
P1—O1—C1—C2 −83.8 (2) P1—N2—C14—C15 149.3 (2)
C6—C1—C2—C3 −1.6 (4) C19—C14—C15—C16 −0.3 (4)
O1—C1—C2—C3 −176.8 (2) N2—C14—C15—C16 −179.9 (2)
C1—C2—C3—C4 1.4 (4) C14—C15—C16—C17 2.2 (4)
C2—C3—C4—C5 −0.7 (4) C15—C16—C17—C18 −2.6 (4)
C3—C4—C5—C6 0.1 (4) C15—C16—C17—C20 179.6 (2)
C2—C1—C6—C5 1.1 (4) C16—C17—C18—C19 1.1 (3)
O1—C1—C6—C5 176.3 (2) C20—C17—C18—C19 178.9 (2)
C4—C5—C6—C1 −0.3 (4) C15—C14—C19—C18 −1.2 (3)
P1—N1—C7—C8 94.9 (3) N2—C14—C19—C18 178.4 (2)
N1—C7—C8—C9 −140.9 (3) C17—C18—C19—C14 0.8 (3)

Hydrogen-bond geometry (Å, °)

D—H···A D—H H···A D···A D—H···A
N1—H1N···O1i 0.76 (3) 2.43 (3) 3.127 (3) 153 (3)
N2—H2N···O2i 0.86 (3) 1.91 (3) 2.761 (3) 176 (3)

Symmetry codes: (i) x+1/2, −y+2, z.

Footnotes

Supplementary data and figures for this paper are available from the IUCr electronic archives (Reference: LD2023).

References

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Associated Data

This section collects any data citations, data availability statements, or supplementary materials included in this article.

Supplementary Materials

Crystal structure: contains datablock(s) I, global. DOI: 10.1107/S1600536811034465/ld2023sup1.cif

e-67-o2523-sup1.cif (26.6KB, cif)

Structure factors: contains datablock(s) I. DOI: 10.1107/S1600536811034465/ld2023Isup2.hkl

e-67-o2523-Isup2.hkl (157KB, hkl)

Additional supplementary materials: crystallographic information; 3D view; checkCIF report


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