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Acta Crystallographica Section E: Structure Reports Online logoLink to Acta Crystallographica Section E: Structure Reports Online
. 2011 Sep 17;67(Pt 10):o2653. doi: 10.1107/S1600536811036804

2-Ethyl­piperidinium chloride

Mohammad T M Al-Dajani a, Jamal Talaat b, Abdusalam Salhin c, Madhukar Hemamalini d, Hoong-Kun Fun d,*,
PMCID: PMC3201318  PMID: 22058776

Abstract

In the title molecular salt, C7H16N+·Cl, the piperidinium ring adopts a chair conformation. In the crystal, the two components are connected by N—H⋯Cl and C—H⋯Cl hydrogen bonds, forming a supra­molecular double-chain structure along the c axis.

Related literature

For biological applications of piperidine, see: Waelbroeck et al. (1992); El Hadri et al. (1995). For puckering parameters, see: Cremer & Pople (1975). For the stability of the temperature controller used in the data collection, see: Cosier & Glazer (1986).graphic file with name e-67-o2653-scheme1.jpg

Experimental

Crystal data

  • C7H16N+·Cl

  • M r = 149.66

  • Orthorhombic, Inline graphic

  • a = 24.2052 (6) Å

  • b = 9.7594 (3) Å

  • c = 7.2764 (2) Å

  • V = 1718.89 (8) Å3

  • Z = 8

  • Mo Kα radiation

  • μ = 0.37 mm−1

  • T = 100 K

  • 0.72 × 0.27 × 0.15 mm

Data collection

  • Bruker SMART APEXII CCD area-detector diffractometer

  • Absorption correction: multi-scan (SADABS; Bruker, 2009) T min = 0.778, T max = 0.948

  • 50389 measured reflections

  • 4453 independent reflections

  • 3438 reflections with I > 2σ(I)

  • R int = 0.045

Refinement

  • R[F 2 > 2σ(F 2)] = 0.040

  • wR(F 2) = 0.088

  • S = 1.07

  • 4453 reflections

  • 91 parameters

  • H atoms treated by a mixture of independent and constrained refinement

  • Δρmax = 0.34 e Å−3

  • Δρmin = −0.27 e Å−3

Data collection: APEX2 (Bruker, 2009); cell refinement: SAINT (Bruker, 2009); data reduction: SAINT; program(s) used to solve structure: SHELXTL (Sheldrick, 2008); program(s) used to refine structure: SHELXTL; molecular graphics: SHELXTL; software used to prepare material for publication: SHELXTL and PLATON (Spek, 2009).

Supplementary Material

Crystal structure: contains datablock(s) global, I. DOI: 10.1107/S1600536811036804/is2773sup1.cif

e-67-o2653-sup1.cif (15.2KB, cif)

Structure factors: contains datablock(s) I. DOI: 10.1107/S1600536811036804/is2773Isup2.hkl

e-67-o2653-Isup2.hkl (213.9KB, hkl)

Supplementary material file. DOI: 10.1107/S1600536811036804/is2773Isup3.cml

Additional supplementary materials: crystallographic information; 3D view; checkCIF report

Table 1. Hydrogen-bond geometry (Å, °).

D—H⋯A D—H H⋯A DA D—H⋯A
N1—H1NA⋯Cl1i 0.886 (14) 2.220 (14) 3.1054 (7) 176.9 (11)
N1—H2NA⋯Cl1 0.899 (15) 2.217 (15) 3.1149 (7) 177.8 (12)
C1—H1A⋯Cl1ii 0.99 2.80 3.6121 (8) 139

Symmetry codes: (i) Inline graphic; (ii) Inline graphic.

Acknowledgments

AS gratefully acknowledges funding from Universiti Sains Malaysia (USM) under the University Research Grant (No. 1001/PKIMIA/811055). HKF and MH thank the Malaysian Government and Universiti Sains Malaysia for the Research University Grant No. 1001/PFIZIK/811160. MH also thanks Universiti Sains Malaysia for a post-doctoral research fellowship.

supplementary crystallographic information

Comment

Piperidine derivatives are the valued heterocyclic compounds in the field of medicinal chemistry. The piperidine nucleus is present in a wide range of biologically active compounds. For example, the binding properties of 4-diphenylacetoxy-N-methylpiperidine methiodide (4-DAMP) and its analogs have been evaluated at muscarinic receptors in human neuroblastoma NB-OK1 cells (M1 receptor subtype), rat heart (M2 subtype), rat pancreas (M3 subtype) and the putative M4 receptor subtype in striatum (Waelbroeck et al., 1992). NMDA receptor antagonist properties of piperidine-2-carboxylic acid derivatives have also been reported (El Hadri et al., 1995). Herein, we have present the crystal structure of the title compound (I).

The asymmetric unit of (I), (Fig. 1), consists of a 2-ethylpiperidinium cation and a chloride anion. The piperidine (N1/C1–C5) ring adopts a chair conformation with puckering parameters Q = 0.5708 (9) Å, θ = 180.00 (9)° and φ = 282 (7)° (Cremer & Pople, 1975). In the crystal structure (Fig. 2), the cations and anions are connected by intermolecular N1—H1NA···Cl1, N1—H2NA···Cl1 and C1—H1A···Cl1 hydrogen bonds (Table 1), forming one-dimensional supramolecular chains along the c-axis.

Experimental

In a round bottom flask, 25ml of tetrahydronfuran (THF) was mixed with 2-ethylpiperidine (0.01 mol, 0.8 g) with stirring. Drops of benzylchloride (0.01 mol, 1.0 g) dissolved in THF was then added. The reaction mixture was refluxed for 30 min. The precipitate formed was washed with THF. The precipitate was then dissolved in methanol at room temperature. After few days, colourless needle-shaped crystals were formed by slow evaporation.

Refinement

Atoms H1N1 and H2N1 were located from a difference Fourier maps and refined freely [N—H = 0.886 (13)–0.896 (14) Å]. The remaining H atoms were positioned geometrically (C—H = 0.98–1.00 Å) and were refined using a riding model, with Uiso(H) = 1.2 or 1.5 Ueq(C). A rotating group model was applied to the methyl groups.

Figures

Fig. 1.

Fig. 1.

The asymmetric unit of the title compound, showing 50% probability displacement ellipsoids. An intermolecular N—H···Cl hydrogen bond is shown by a dashed line.

Fig. 2.

Fig. 2.

The crystal packing of the title compound, viewed along the a axis.

Crystal data

C7H16N+·Cl F(000) = 656
Mr = 149.66 Dx = 1.157 Mg m3
Orthorhombic, Pbcn Mo Kα radiation, λ = 0.71073 Å
Hall symbol: -P 2n 2ab Cell parameters from 9898 reflections
a = 24.2052 (6) Å θ = 2.3–36.9°
b = 9.7594 (3) Å µ = 0.37 mm1
c = 7.2764 (2) Å T = 100 K
V = 1718.89 (8) Å3 Block, colourless
Z = 8 0.72 × 0.27 × 0.15 mm

Data collection

Bruker SMART APEXII CCD area-detector diffractometer 4453 independent reflections
Radiation source: fine-focus sealed tube 3438 reflections with I > 2σ(I)
graphite Rint = 0.045
φ and ω scans θmax = 37.3°, θmin = 1.7°
Absorption correction: multi-scan (SADABS; Bruker, 2009) h = −40→40
Tmin = 0.778, Tmax = 0.948 k = −16→16
50389 measured reflections l = −12→12

Refinement

Refinement on F2 Primary atom site location: structure-invariant direct methods
Least-squares matrix: full Secondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.040 Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.088 H atoms treated by a mixture of independent and constrained refinement
S = 1.07 w = 1/[σ2(Fo2) + (0.0343P)2 + 0.4206P] where P = (Fo2 + 2Fc2)/3
4453 reflections (Δ/σ)max = 0.001
91 parameters Δρmax = 0.34 e Å3
0 restraints Δρmin = −0.27 e Å3

Special details

Experimental. The crystal was placed in the cold stream of an Oxford Cryosystems Cobra open-flow nitrogen cryostat (Cosier & Glazer, 1986) operating at 100.0 (1) K.
Geometry. All s.u.'s (except the s.u. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell s.u.'s are taken into account individually in the estimation of s.u.'s in distances, angles and torsion angles; correlations between s.u.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell s.u.'s is used for estimating s.u.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > 2σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.

Fractional atomic coordinates and isotropic or equivalent isotropic displacement parameters (Å2)

x y z Uiso*/Ueq
N1 0.39971 (3) 0.13082 (7) 0.95142 (9) 0.01471 (11)
C1 0.45090 (3) 0.18923 (8) 1.03505 (12) 0.01927 (15)
H1A 0.4838 0.1482 0.9761 0.023*
H1B 0.4520 0.1670 1.1678 0.023*
C2 0.45182 (4) 0.34373 (9) 1.00941 (12) 0.02298 (17)
H2A 0.4543 0.3655 0.8768 0.028*
H2B 0.4848 0.3823 1.0710 0.028*
C3 0.39979 (4) 0.40873 (9) 1.08969 (12) 0.02384 (17)
H3A 0.3999 0.5084 1.0647 0.029*
H3B 0.3993 0.3955 1.2246 0.029*
C4 0.34807 (4) 0.34393 (8) 1.00500 (12) 0.01959 (15)
H4A 0.3148 0.3837 1.0638 0.024*
H4B 0.3467 0.3664 0.8724 0.024*
C5 0.34710 (3) 0.18860 (8) 1.02842 (10) 0.01526 (13)
H5A 0.3452 0.1667 1.1625 0.018*
C6 0.29921 (4) 0.11725 (8) 0.93081 (12) 0.01881 (14)
H6A 0.3011 0.1382 0.7978 0.023*
H6B 0.3033 0.0169 0.9455 0.023*
C7 0.24270 (4) 0.16025 (11) 1.00354 (15) 0.02814 (19)
H7A 0.2138 0.1106 0.9369 0.042*
H7B 0.2378 0.2590 0.9855 0.042*
H7C 0.2403 0.1388 1.1349 0.042*
H1NA 0.4002 (5) 0.0410 (14) 0.9689 (17) 0.021 (3)*
H2NA 0.4007 (4) 0.1476 (13) 0.830 (2) 0.024 (3)*
Cl1 0.401145 (8) 0.182057 (18) 0.52892 (2) 0.01611 (5)

Atomic displacement parameters (Å2)

U11 U22 U33 U12 U13 U23
N1 0.0164 (3) 0.0142 (3) 0.0135 (3) 0.0003 (2) 0.0004 (2) 0.0007 (2)
C1 0.0173 (3) 0.0207 (3) 0.0198 (3) −0.0028 (3) −0.0031 (3) 0.0026 (3)
C2 0.0263 (4) 0.0213 (4) 0.0213 (4) −0.0086 (3) −0.0037 (3) 0.0031 (3)
C3 0.0368 (5) 0.0158 (3) 0.0189 (3) −0.0042 (3) −0.0016 (3) −0.0012 (3)
C4 0.0254 (4) 0.0137 (3) 0.0197 (3) 0.0020 (3) 0.0015 (3) 0.0000 (3)
C5 0.0176 (3) 0.0142 (3) 0.0140 (3) 0.0010 (2) 0.0026 (3) 0.0008 (2)
C6 0.0166 (3) 0.0188 (3) 0.0210 (3) −0.0001 (3) 0.0004 (3) 0.0002 (3)
C7 0.0186 (4) 0.0286 (4) 0.0372 (5) 0.0007 (3) 0.0062 (4) 0.0015 (4)
Cl1 0.02022 (9) 0.01473 (8) 0.01339 (7) −0.00044 (6) 0.00104 (6) 0.00007 (5)

Geometric parameters (Å, °)

N1—C1 1.4935 (11) C3—H3B 0.9900
N1—C5 1.5012 (10) C4—C5 1.5256 (11)
N1—H1NA 0.886 (13) C4—H4A 0.9900
N1—H2NA 0.896 (14) C4—H4B 0.9900
C1—C2 1.5195 (12) C5—C6 1.5275 (11)
C1—H1A 0.9900 C5—H5A 1.0000
C1—H1B 0.9900 C6—C7 1.5256 (13)
C2—C3 1.5264 (14) C6—H6A 0.9900
C2—H2A 0.9900 C6—H6B 0.9900
C2—H2B 0.9900 C7—H7A 0.9800
C3—C4 1.5318 (13) C7—H7B 0.9800
C3—H3A 0.9900 C7—H7C 0.9800
C1—N1—C5 114.10 (6) C5—C4—C3 112.20 (7)
C1—N1—H1NA 108.0 (7) C5—C4—H4A 109.2
C5—N1—H1NA 109.2 (7) C3—C4—H4A 109.2
C1—N1—H2NA 108.0 (7) C5—C4—H4B 109.2
C5—N1—H2NA 108.7 (7) C3—C4—H4B 109.2
H1NA—N1—H2NA 108.7 (11) H4A—C4—H4B 107.9
N1—C1—C2 109.93 (7) N1—C5—C4 108.57 (7)
N1—C1—H1A 109.7 N1—C5—C6 107.40 (6)
C2—C1—H1A 109.7 C4—C5—C6 114.38 (7)
N1—C1—H1B 109.7 N1—C5—H5A 108.8
C2—C1—H1B 109.7 C4—C5—H5A 108.8
H1A—C1—H1B 108.2 C6—C5—H5A 108.8
C1—C2—C3 110.69 (7) C7—C6—C5 113.19 (7)
C1—C2—H2A 109.5 C7—C6—H6A 108.9
C3—C2—H2A 109.5 C5—C6—H6A 108.9
C1—C2—H2B 109.5 C7—C6—H6B 108.9
C3—C2—H2B 109.5 C5—C6—H6B 108.9
H2A—C2—H2B 108.1 H6A—C6—H6B 107.8
C2—C3—C4 110.41 (7) C6—C7—H7A 109.5
C2—C3—H3A 109.6 C6—C7—H7B 109.5
C4—C3—H3A 109.6 H7A—C7—H7B 109.5
C2—C3—H3B 109.6 C6—C7—H7C 109.5
C4—C3—H3B 109.6 H7A—C7—H7C 109.5
H3A—C3—H3B 108.1 H7B—C7—H7C 109.5
C5—N1—C1—C2 −58.09 (9) C1—N1—C5—C6 −179.25 (6)
N1—C1—C2—C3 56.11 (9) C3—C4—C5—N1 −54.61 (9)
C1—C2—C3—C4 −55.59 (9) C3—C4—C5—C6 −174.51 (7)
C2—C3—C4—C5 55.68 (9) N1—C5—C6—C7 176.69 (7)
C1—N1—C5—C4 56.59 (8) C4—C5—C6—C7 −62.75 (10)

Hydrogen-bond geometry (Å, °)

D—H···A D—H H···A D···A D—H···A
N1—H1NA···Cl1i 0.886 (14) 2.220 (14) 3.1054 (7) 176.9 (11)
N1—H2NA···Cl1 0.899 (15) 2.217 (15) 3.1149 (7) 177.8 (12)
C1—H1A···Cl1ii 0.99 2.80 3.6121 (8) 139

Symmetry codes: (i) x, −y, z+1/2; (ii) −x+1, y, −z+3/2.

Footnotes

Supplementary data and figures for this paper are available from the IUCr electronic archives (Reference: IS2773).

References

  1. Bruker (2009). APEX2, SAINT and SADABS Bruker AXS Inc., Madison, Wisconsin, USA.
  2. Cosier, J. & Glazer, A. M. (1986). J. Appl. Cryst. 19, 105–107.
  3. Cremer, D. & Pople, J. A. (1975). J. Am. Chem. Soc. 97, 1354–1358.
  4. El Hadri, A., Maldivi, P., Leclerc, G. & Rocher, J.-P. (1995). Bioorg. Med. Chem. 3, 1183–1201. [DOI] [PubMed]
  5. Sheldrick, G. M. (2008). Acta Cryst. A64, 112–122. [DOI] [PubMed]
  6. Spek, A. L. (2009). Acta Cryst. D65, 148–155. [DOI] [PMC free article] [PubMed]
  7. Waelbroeck, M., Camus, J., Tastenoy, M. & Christophe, J. (1992). Br. J. Pharmacol. 105, 97–102. [DOI] [PMC free article] [PubMed]

Associated Data

This section collects any data citations, data availability statements, or supplementary materials included in this article.

Supplementary Materials

Crystal structure: contains datablock(s) global, I. DOI: 10.1107/S1600536811036804/is2773sup1.cif

e-67-o2653-sup1.cif (15.2KB, cif)

Structure factors: contains datablock(s) I. DOI: 10.1107/S1600536811036804/is2773Isup2.hkl

e-67-o2653-Isup2.hkl (213.9KB, hkl)

Supplementary material file. DOI: 10.1107/S1600536811036804/is2773Isup3.cml

Additional supplementary materials: crystallographic information; 3D view; checkCIF report


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