Abstract
In the title molecular salt, C7H16N+·Cl−, the piperidinium ring adopts a chair conformation. In the crystal, the two components are connected by N—H⋯Cl and C—H⋯Cl hydrogen bonds, forming a supramolecular double-chain structure along the c axis.
Related literature
For biological applications of piperidine, see: Waelbroeck et al. (1992 ▶); El Hadri et al. (1995 ▶). For puckering parameters, see: Cremer & Pople (1975 ▶). For the stability of the temperature controller used in the data collection, see: Cosier & Glazer (1986 ▶).
Experimental
Crystal data
C7H16N+·Cl−
M r = 149.66
Orthorhombic,
a = 24.2052 (6) Å
b = 9.7594 (3) Å
c = 7.2764 (2) Å
V = 1718.89 (8) Å3
Z = 8
Mo Kα radiation
μ = 0.37 mm−1
T = 100 K
0.72 × 0.27 × 0.15 mm
Data collection
Bruker SMART APEXII CCD area-detector diffractometer
Absorption correction: multi-scan (SADABS; Bruker, 2009 ▶) T min = 0.778, T max = 0.948
50389 measured reflections
4453 independent reflections
3438 reflections with I > 2σ(I)
R int = 0.045
Refinement
R[F 2 > 2σ(F 2)] = 0.040
wR(F 2) = 0.088
S = 1.07
4453 reflections
91 parameters
H atoms treated by a mixture of independent and constrained refinement
Δρmax = 0.34 e Å−3
Δρmin = −0.27 e Å−3
Data collection: APEX2 (Bruker, 2009 ▶); cell refinement: SAINT (Bruker, 2009 ▶); data reduction: SAINT; program(s) used to solve structure: SHELXTL (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXTL; molecular graphics: SHELXTL; software used to prepare material for publication: SHELXTL and PLATON (Spek, 2009 ▶).
Supplementary Material
Crystal structure: contains datablock(s) global, I. DOI: 10.1107/S1600536811036804/is2773sup1.cif
Structure factors: contains datablock(s) I. DOI: 10.1107/S1600536811036804/is2773Isup2.hkl
Supplementary material file. DOI: 10.1107/S1600536811036804/is2773Isup3.cml
Additional supplementary materials: crystallographic information; 3D view; checkCIF report
Table 1. Hydrogen-bond geometry (Å, °).
| D—H⋯A | D—H | H⋯A | D⋯A | D—H⋯A |
|---|---|---|---|---|
| N1—H1NA⋯Cl1i | 0.886 (14) | 2.220 (14) | 3.1054 (7) | 176.9 (11) |
| N1—H2NA⋯Cl1 | 0.899 (15) | 2.217 (15) | 3.1149 (7) | 177.8 (12) |
| C1—H1A⋯Cl1ii | 0.99 | 2.80 | 3.6121 (8) | 139 |
Symmetry codes: (i)
; (ii)
.
Acknowledgments
AS gratefully acknowledges funding from Universiti Sains Malaysia (USM) under the University Research Grant (No. 1001/PKIMIA/811055). HKF and MH thank the Malaysian Government and Universiti Sains Malaysia for the Research University Grant No. 1001/PFIZIK/811160. MH also thanks Universiti Sains Malaysia for a post-doctoral research fellowship.
supplementary crystallographic information
Comment
Piperidine derivatives are the valued heterocyclic compounds in the field of medicinal chemistry. The piperidine nucleus is present in a wide range of biologically active compounds. For example, the binding properties of 4-diphenylacetoxy-N-methylpiperidine methiodide (4-DAMP) and its analogs have been evaluated at muscarinic receptors in human neuroblastoma NB-OK1 cells (M1 receptor subtype), rat heart (M2 subtype), rat pancreas (M3 subtype) and the putative M4 receptor subtype in striatum (Waelbroeck et al., 1992). NMDA receptor antagonist properties of piperidine-2-carboxylic acid derivatives have also been reported (El Hadri et al., 1995). Herein, we have present the crystal structure of the title compound (I).
The asymmetric unit of (I), (Fig. 1), consists of a 2-ethylpiperidinium cation and a chloride anion. The piperidine (N1/C1–C5) ring adopts a chair conformation with puckering parameters Q = 0.5708 (9) Å, θ = 180.00 (9)° and φ = 282 (7)° (Cremer & Pople, 1975). In the crystal structure (Fig. 2), the cations and anions are connected by intermolecular N1—H1NA···Cl1, N1—H2NA···Cl1 and C1—H1A···Cl1 hydrogen bonds (Table 1), forming one-dimensional supramolecular chains along the c-axis.
Experimental
In a round bottom flask, 25ml of tetrahydronfuran (THF) was mixed with 2-ethylpiperidine (0.01 mol, 0.8 g) with stirring. Drops of benzylchloride (0.01 mol, 1.0 g) dissolved in THF was then added. The reaction mixture was refluxed for 30 min. The precipitate formed was washed with THF. The precipitate was then dissolved in methanol at room temperature. After few days, colourless needle-shaped crystals were formed by slow evaporation.
Refinement
Atoms H1N1 and H2N1 were located from a difference Fourier maps and refined freely [N—H = 0.886 (13)–0.896 (14) Å]. The remaining H atoms were positioned geometrically (C—H = 0.98–1.00 Å) and were refined using a riding model, with Uiso(H) = 1.2 or 1.5 Ueq(C). A rotating group model was applied to the methyl groups.
Figures
Fig. 1.
The asymmetric unit of the title compound, showing 50% probability displacement ellipsoids. An intermolecular N—H···Cl hydrogen bond is shown by a dashed line.
Fig. 2.
The crystal packing of the title compound, viewed along the a axis.
Crystal data
| C7H16N+·Cl− | F(000) = 656 |
| Mr = 149.66 | Dx = 1.157 Mg m−3 |
| Orthorhombic, Pbcn | Mo Kα radiation, λ = 0.71073 Å |
| Hall symbol: -P 2n 2ab | Cell parameters from 9898 reflections |
| a = 24.2052 (6) Å | θ = 2.3–36.9° |
| b = 9.7594 (3) Å | µ = 0.37 mm−1 |
| c = 7.2764 (2) Å | T = 100 K |
| V = 1718.89 (8) Å3 | Block, colourless |
| Z = 8 | 0.72 × 0.27 × 0.15 mm |
Data collection
| Bruker SMART APEXII CCD area-detector diffractometer | 4453 independent reflections |
| Radiation source: fine-focus sealed tube | 3438 reflections with I > 2σ(I) |
| graphite | Rint = 0.045 |
| φ and ω scans | θmax = 37.3°, θmin = 1.7° |
| Absorption correction: multi-scan (SADABS; Bruker, 2009) | h = −40→40 |
| Tmin = 0.778, Tmax = 0.948 | k = −16→16 |
| 50389 measured reflections | l = −12→12 |
Refinement
| Refinement on F2 | Primary atom site location: structure-invariant direct methods |
| Least-squares matrix: full | Secondary atom site location: difference Fourier map |
| R[F2 > 2σ(F2)] = 0.040 | Hydrogen site location: inferred from neighbouring sites |
| wR(F2) = 0.088 | H atoms treated by a mixture of independent and constrained refinement |
| S = 1.07 | w = 1/[σ2(Fo2) + (0.0343P)2 + 0.4206P] where P = (Fo2 + 2Fc2)/3 |
| 4453 reflections | (Δ/σ)max = 0.001 |
| 91 parameters | Δρmax = 0.34 e Å−3 |
| 0 restraints | Δρmin = −0.27 e Å−3 |
Special details
| Experimental. The crystal was placed in the cold stream of an Oxford Cryosystems Cobra open-flow nitrogen cryostat (Cosier & Glazer, 1986) operating at 100.0 (1) K. |
| Geometry. All s.u.'s (except the s.u. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell s.u.'s are taken into account individually in the estimation of s.u.'s in distances, angles and torsion angles; correlations between s.u.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell s.u.'s is used for estimating s.u.'s involving l.s. planes. |
| Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > 2σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger. |
Fractional atomic coordinates and isotropic or equivalent isotropic displacement parameters (Å2)
| x | y | z | Uiso*/Ueq | ||
| N1 | 0.39971 (3) | 0.13082 (7) | 0.95142 (9) | 0.01471 (11) | |
| C1 | 0.45090 (3) | 0.18923 (8) | 1.03505 (12) | 0.01927 (15) | |
| H1A | 0.4838 | 0.1482 | 0.9761 | 0.023* | |
| H1B | 0.4520 | 0.1670 | 1.1678 | 0.023* | |
| C2 | 0.45182 (4) | 0.34373 (9) | 1.00941 (12) | 0.02298 (17) | |
| H2A | 0.4543 | 0.3655 | 0.8768 | 0.028* | |
| H2B | 0.4848 | 0.3823 | 1.0710 | 0.028* | |
| C3 | 0.39979 (4) | 0.40873 (9) | 1.08969 (12) | 0.02384 (17) | |
| H3A | 0.3999 | 0.5084 | 1.0647 | 0.029* | |
| H3B | 0.3993 | 0.3955 | 1.2246 | 0.029* | |
| C4 | 0.34807 (4) | 0.34393 (8) | 1.00500 (12) | 0.01959 (15) | |
| H4A | 0.3148 | 0.3837 | 1.0638 | 0.024* | |
| H4B | 0.3467 | 0.3664 | 0.8724 | 0.024* | |
| C5 | 0.34710 (3) | 0.18860 (8) | 1.02842 (10) | 0.01526 (13) | |
| H5A | 0.3452 | 0.1667 | 1.1625 | 0.018* | |
| C6 | 0.29921 (4) | 0.11725 (8) | 0.93081 (12) | 0.01881 (14) | |
| H6A | 0.3011 | 0.1382 | 0.7978 | 0.023* | |
| H6B | 0.3033 | 0.0169 | 0.9455 | 0.023* | |
| C7 | 0.24270 (4) | 0.16025 (11) | 1.00354 (15) | 0.02814 (19) | |
| H7A | 0.2138 | 0.1106 | 0.9369 | 0.042* | |
| H7B | 0.2378 | 0.2590 | 0.9855 | 0.042* | |
| H7C | 0.2403 | 0.1388 | 1.1349 | 0.042* | |
| H1NA | 0.4002 (5) | 0.0410 (14) | 0.9689 (17) | 0.021 (3)* | |
| H2NA | 0.4007 (4) | 0.1476 (13) | 0.830 (2) | 0.024 (3)* | |
| Cl1 | 0.401145 (8) | 0.182057 (18) | 0.52892 (2) | 0.01611 (5) |
Atomic displacement parameters (Å2)
| U11 | U22 | U33 | U12 | U13 | U23 | |
| N1 | 0.0164 (3) | 0.0142 (3) | 0.0135 (3) | 0.0003 (2) | 0.0004 (2) | 0.0007 (2) |
| C1 | 0.0173 (3) | 0.0207 (3) | 0.0198 (3) | −0.0028 (3) | −0.0031 (3) | 0.0026 (3) |
| C2 | 0.0263 (4) | 0.0213 (4) | 0.0213 (4) | −0.0086 (3) | −0.0037 (3) | 0.0031 (3) |
| C3 | 0.0368 (5) | 0.0158 (3) | 0.0189 (3) | −0.0042 (3) | −0.0016 (3) | −0.0012 (3) |
| C4 | 0.0254 (4) | 0.0137 (3) | 0.0197 (3) | 0.0020 (3) | 0.0015 (3) | 0.0000 (3) |
| C5 | 0.0176 (3) | 0.0142 (3) | 0.0140 (3) | 0.0010 (2) | 0.0026 (3) | 0.0008 (2) |
| C6 | 0.0166 (3) | 0.0188 (3) | 0.0210 (3) | −0.0001 (3) | 0.0004 (3) | 0.0002 (3) |
| C7 | 0.0186 (4) | 0.0286 (4) | 0.0372 (5) | 0.0007 (3) | 0.0062 (4) | 0.0015 (4) |
| Cl1 | 0.02022 (9) | 0.01473 (8) | 0.01339 (7) | −0.00044 (6) | 0.00104 (6) | 0.00007 (5) |
Geometric parameters (Å, °)
| N1—C1 | 1.4935 (11) | C3—H3B | 0.9900 |
| N1—C5 | 1.5012 (10) | C4—C5 | 1.5256 (11) |
| N1—H1NA | 0.886 (13) | C4—H4A | 0.9900 |
| N1—H2NA | 0.896 (14) | C4—H4B | 0.9900 |
| C1—C2 | 1.5195 (12) | C5—C6 | 1.5275 (11) |
| C1—H1A | 0.9900 | C5—H5A | 1.0000 |
| C1—H1B | 0.9900 | C6—C7 | 1.5256 (13) |
| C2—C3 | 1.5264 (14) | C6—H6A | 0.9900 |
| C2—H2A | 0.9900 | C6—H6B | 0.9900 |
| C2—H2B | 0.9900 | C7—H7A | 0.9800 |
| C3—C4 | 1.5318 (13) | C7—H7B | 0.9800 |
| C3—H3A | 0.9900 | C7—H7C | 0.9800 |
| C1—N1—C5 | 114.10 (6) | C5—C4—C3 | 112.20 (7) |
| C1—N1—H1NA | 108.0 (7) | C5—C4—H4A | 109.2 |
| C5—N1—H1NA | 109.2 (7) | C3—C4—H4A | 109.2 |
| C1—N1—H2NA | 108.0 (7) | C5—C4—H4B | 109.2 |
| C5—N1—H2NA | 108.7 (7) | C3—C4—H4B | 109.2 |
| H1NA—N1—H2NA | 108.7 (11) | H4A—C4—H4B | 107.9 |
| N1—C1—C2 | 109.93 (7) | N1—C5—C4 | 108.57 (7) |
| N1—C1—H1A | 109.7 | N1—C5—C6 | 107.40 (6) |
| C2—C1—H1A | 109.7 | C4—C5—C6 | 114.38 (7) |
| N1—C1—H1B | 109.7 | N1—C5—H5A | 108.8 |
| C2—C1—H1B | 109.7 | C4—C5—H5A | 108.8 |
| H1A—C1—H1B | 108.2 | C6—C5—H5A | 108.8 |
| C1—C2—C3 | 110.69 (7) | C7—C6—C5 | 113.19 (7) |
| C1—C2—H2A | 109.5 | C7—C6—H6A | 108.9 |
| C3—C2—H2A | 109.5 | C5—C6—H6A | 108.9 |
| C1—C2—H2B | 109.5 | C7—C6—H6B | 108.9 |
| C3—C2—H2B | 109.5 | C5—C6—H6B | 108.9 |
| H2A—C2—H2B | 108.1 | H6A—C6—H6B | 107.8 |
| C2—C3—C4 | 110.41 (7) | C6—C7—H7A | 109.5 |
| C2—C3—H3A | 109.6 | C6—C7—H7B | 109.5 |
| C4—C3—H3A | 109.6 | H7A—C7—H7B | 109.5 |
| C2—C3—H3B | 109.6 | C6—C7—H7C | 109.5 |
| C4—C3—H3B | 109.6 | H7A—C7—H7C | 109.5 |
| H3A—C3—H3B | 108.1 | H7B—C7—H7C | 109.5 |
| C5—N1—C1—C2 | −58.09 (9) | C1—N1—C5—C6 | −179.25 (6) |
| N1—C1—C2—C3 | 56.11 (9) | C3—C4—C5—N1 | −54.61 (9) |
| C1—C2—C3—C4 | −55.59 (9) | C3—C4—C5—C6 | −174.51 (7) |
| C2—C3—C4—C5 | 55.68 (9) | N1—C5—C6—C7 | 176.69 (7) |
| C1—N1—C5—C4 | 56.59 (8) | C4—C5—C6—C7 | −62.75 (10) |
Hydrogen-bond geometry (Å, °)
| D—H···A | D—H | H···A | D···A | D—H···A |
| N1—H1NA···Cl1i | 0.886 (14) | 2.220 (14) | 3.1054 (7) | 176.9 (11) |
| N1—H2NA···Cl1 | 0.899 (15) | 2.217 (15) | 3.1149 (7) | 177.8 (12) |
| C1—H1A···Cl1ii | 0.99 | 2.80 | 3.6121 (8) | 139 |
Symmetry codes: (i) x, −y, z+1/2; (ii) −x+1, y, −z+3/2.
Footnotes
Supplementary data and figures for this paper are available from the IUCr electronic archives (Reference: IS2773).
References
- Bruker (2009). APEX2, SAINT and SADABS Bruker AXS Inc., Madison, Wisconsin, USA.
- Cosier, J. & Glazer, A. M. (1986). J. Appl. Cryst. 19, 105–107.
- Cremer, D. & Pople, J. A. (1975). J. Am. Chem. Soc. 97, 1354–1358.
- El Hadri, A., Maldivi, P., Leclerc, G. & Rocher, J.-P. (1995). Bioorg. Med. Chem. 3, 1183–1201. [DOI] [PubMed]
- Sheldrick, G. M. (2008). Acta Cryst. A64, 112–122. [DOI] [PubMed]
- Spek, A. L. (2009). Acta Cryst. D65, 148–155. [DOI] [PMC free article] [PubMed]
- Waelbroeck, M., Camus, J., Tastenoy, M. & Christophe, J. (1992). Br. J. Pharmacol. 105, 97–102. [DOI] [PMC free article] [PubMed]
Associated Data
This section collects any data citations, data availability statements, or supplementary materials included in this article.
Supplementary Materials
Crystal structure: contains datablock(s) global, I. DOI: 10.1107/S1600536811036804/is2773sup1.cif
Structure factors: contains datablock(s) I. DOI: 10.1107/S1600536811036804/is2773Isup2.hkl
Supplementary material file. DOI: 10.1107/S1600536811036804/is2773Isup3.cml
Additional supplementary materials: crystallographic information; 3D view; checkCIF report


