Abstract
In the title compound, C15H13ClO3S, the chlorothiophene and dimethoxyphenyl groups are linked by a prop-2-en-1-one group. The C=C double bond exhibits an E conformation. The molecule is non-planar, with a dihedral angle of 31.12 (5)° between the chlorothiophene and dimethoxyphenyl rings. The methoxy group at position 3 is coplanar with the benzene ring to which it is attached, with a C—O—C—C torsion angle of −3.8 (3)°. The methoxy group attached at position 2 of the benzene ring is in a (+)synclinal conformation, as indicated by the C—O—C—C torsion angle of −73.6 (2)°. In the crystal, two different C—H⋯O intermolecular interactions generate chains of molecules extending along the b axis.
Related literature
For general background to chalcones and their biological properties, see: Choudary et al. (1999 ▶); Tomazela et al. (2000 ▶). For a related structure, see: Benmekhbi et al. (2009 ▶).
Experimental
Crystal data
C15H13ClO3S
M r = 308.76
Monoclinic,
a = 11.6139 (8) Å
b = 8.5605 (5) Å
c = 14.4174 (9) Å
β = 99.907 (2)°
V = 1412.02 (16) Å3
Z = 4
Mo Kα radiation
μ = 0.42 mm−1
T = 296 K
0.20 × 0.18 × 0.16 mm
Data collection
Bruker SMART APEX CCD detector diffractometer
Absorption correction: multi-scan (SADABS; Bruker, 1998 ▶) T min = 0.920, T max = 0.936
9286 measured reflections
3087 independent reflections
2348 reflections with I > 2σ(I)
R int = 0.026
Refinement
R[F 2 > 2σ(F 2)] = 0.038
wR(F 2) = 0.102
S = 1.07
3087 reflections
183 parameters
H-atom parameters constrained
Δρmax = 0.21 e Å−3
Δρmin = −0.26 e Å−3
Data collection: SMART (Bruker, 1998 ▶); cell refinement: SAINT-Plus (Bruker, 1998 ▶); data reduction: SAINT-Plus; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: ORTEP-3 (Farrugia, 1997 ▶) and CAMERON (Watkin et al., 1996 ▶); software used to prepare material for publication: WinGX (Farrugia, 1999 ▶).
Supplementary Material
Crystal structure: contains datablock(s) global, I. DOI: 10.1107/S1600536811037135/pv2439sup1.cif
Structure factors: contains datablock(s) I. DOI: 10.1107/S1600536811037135/pv2439Isup2.hkl
Supplementary material file. DOI: 10.1107/S1600536811037135/pv2439Isup3.cml
Additional supplementary materials: crystallographic information; 3D view; checkCIF report
Table 1. Hydrogen-bond geometry (Å, °).
| D—H⋯A | D—H | H⋯A | D⋯A | D—H⋯A |
|---|---|---|---|---|
| C2—H2⋯O1i | 0.93 | 2.53 | 3.209 (2) | 130 |
| C15—H15A⋯O2ii | 0.96 | 2.55 | 3.423 (3) | 151 |
Symmetry codes: (i)
; (ii)
.
Acknowledgments
ANP is thankful to Manipal Institute of Technology, Manipal University.
supplementary crystallographic information
Comment
Chalcones represent one of the most abundant and ubiquitous group of natural products (Tomazela, et al., 2000). In the past few years, they have been shown to possess interesting biological properties and synthetic intermediates (Choudary, et al., 1999). In the title compound (Fig. 1), the chlorothiophene and dimethoxyphenyl groups are linked by a prop-2-en-1-one group. The chlorothiophene and dimethoxyphenyl rings are non-planar with the dihedral angle 31.12 (5)°. The torsion angle C15–O3–C12–C11 is 3.7 (3)° indicating that the O3 methoxy group is coplanar with the attached benzene ring. The other methoxy group at O2 is in a + synclinal conformation as indicated by the torsion angle 73.6 (2)° for C14–O2–C13–C12. The C═C double bond exhibits an E conformation (Benmekhbi, et al., 2009). The crystal structure is stabilized by two different C—H···O intermolecular interactions generating chains of molecules along the b-axis (Fig. 2).
Experimental
To synthesizethe the title compound, 2-acetyl-5-chlorothiophene (0.01 mol) and 2,3-dimethoxybenzaldehyde (0.01 mol) were dissolved in methanol (60 ml). Sodium hydroxide (5 ml, 20%) was then added drop wise to the solution, and it was stirred for 2 h. The contents of the flask were poured into ice-cold water, and the resulting crude solid was collected by filtration. The compound was dried and re-crystallized twice from acetone.
Refinement
The H atoms were placed at calculated positions in the riding model approximation with C—H = 0.93 and 0.96 Å, for aryl and methyl H-atoms, respectively, with Uiso(H) = 1.2 and 1.5Ueq(C).
Figures
Fig. 1.
ORTEP (Farrugia, 1997) view of the title compound, showing 50% probability ellipsoids and the atom numbering scheme.
Fig. 2.
A unit cell packing of the title compound showing intermolecular interactions with dotted lines. H-atoms not involved in hydrogen bonding have been excluded for clarity.
Crystal data
| C15H13ClO3S | F(000) = 640 |
| Mr = 308.76 | Dx = 1.452 Mg m−3 |
| Monoclinic, P21/c | Mo Kα radiation, λ = 0.71073 Å |
| Hall symbol: -P 2ybc | Cell parameters from 3087 reflections |
| a = 11.6139 (8) Å | θ = 1.8–27.0° |
| b = 8.5605 (5) Å | µ = 0.42 mm−1 |
| c = 14.4174 (9) Å | T = 296 K |
| β = 99.907 (2)° | Block, yellow |
| V = 1412.02 (16) Å3 | 0.20 × 0.18 × 0.16 mm |
| Z = 4 |
Data collection
| Bruker SMART APEX CCD detector diffractometer | 3087 independent reflections |
| Radiation source: fine-focus sealed tube | 2348 reflections with I > 2σ(I) |
| graphite | Rint = 0.026 |
| ω scans | θmax = 27.0°, θmin = 1.8° |
| Absorption correction: multi-scan (SADABS; Bruker, 1998) | h = −14→14 |
| Tmin = 0.920, Tmax = 0.936 | k = −8→10 |
| 9286 measured reflections | l = −18→14 |
Refinement
| Refinement on F2 | Primary atom site location: structure-invariant direct methods |
| Least-squares matrix: full | Secondary atom site location: difference Fourier map |
| R[F2 > 2σ(F2)] = 0.038 | Hydrogen site location: inferred from neighbouring sites |
| wR(F2) = 0.102 | H-atom parameters constrained |
| S = 1.07 | w = 1/[σ2(Fo2) + (0.0494P)2 + 0.1854P] where P = (Fo2 + 2Fc2)/3 |
| 3087 reflections | (Δ/σ)max = 0.001 |
| 183 parameters | Δρmax = 0.21 e Å−3 |
| 0 restraints | Δρmin = −0.26 e Å−3 |
Special details
| Geometry. All s.u.'s (except the s.u. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell s.u.'s are taken into account individually in the estimation of s.u.'s in distances, angles and torsion angles; correlations between s.u.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell s.u.'s is used for estimating s.u.'s involving l.s. planes. |
| Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > 2σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger. |
Fractional atomic coordinates and isotropic or equivalent isotropic displacement parameters (Å2)
| x | y | z | Uiso*/Ueq | ||
| Cl1 | 0.22862 (5) | 0.40719 (7) | 1.17836 (4) | 0.06157 (19) | |
| S1 | 0.33583 (4) | 0.57846 (6) | 1.03539 (3) | 0.04070 (15) | |
| O1 | 0.46583 (12) | 0.75106 (18) | 0.91191 (10) | 0.0540 (4) | |
| O2 | 0.80027 (11) | 0.99907 (15) | 0.81682 (8) | 0.0413 (3) | |
| O3 | 0.97557 (11) | 1.20940 (17) | 0.83929 (10) | 0.0509 (4) | |
| C1 | 0.33815 (16) | 0.5228 (2) | 1.14971 (13) | 0.0387 (4) | |
| C2 | 0.43004 (17) | 0.5799 (2) | 1.21037 (13) | 0.0451 (5) | |
| H2 | 0.4440 | 0.5608 | 1.2748 | 0.054* | |
| C3 | 0.50212 (16) | 0.6722 (2) | 1.16311 (13) | 0.0427 (5) | |
| H3 | 0.5697 | 0.7210 | 1.1936 | 0.051* | |
| C4 | 0.46355 (14) | 0.6834 (2) | 1.06827 (12) | 0.0358 (4) | |
| C5 | 0.51284 (15) | 0.7641 (2) | 0.99432 (13) | 0.0384 (4) | |
| C6 | 0.61819 (15) | 0.8604 (2) | 1.02313 (13) | 0.0407 (4) | |
| H6 | 0.6442 | 0.8791 | 1.0868 | 0.049* | |
| C7 | 0.67724 (15) | 0.9214 (2) | 0.96006 (13) | 0.0382 (4) | |
| H7 | 0.6509 | 0.8949 | 0.8975 | 0.046* | |
| C8 | 0.77860 (15) | 1.0250 (2) | 0.97828 (12) | 0.0357 (4) | |
| C9 | 0.82092 (16) | 1.0873 (2) | 1.06805 (13) | 0.0431 (5) | |
| H9 | 0.7857 | 1.0592 | 1.1188 | 0.052* | |
| C10 | 0.91330 (17) | 1.1886 (3) | 1.08140 (14) | 0.0485 (5) | |
| H10 | 0.9406 | 1.2280 | 1.1413 | 0.058* | |
| C11 | 0.96713 (16) | 1.2336 (2) | 1.00634 (14) | 0.0466 (5) | |
| H11 | 1.0293 | 1.3036 | 1.0161 | 0.056* | |
| C12 | 0.92801 (15) | 1.1742 (2) | 0.91742 (13) | 0.0396 (4) | |
| C13 | 0.83426 (15) | 1.0682 (2) | 0.90333 (12) | 0.0347 (4) | |
| C14 | 0.73927 (19) | 1.0981 (3) | 0.74504 (15) | 0.0540 (6) | |
| H14C | 0.6614 | 1.1159 | 0.7566 | 0.081* | |
| H14B | 0.7358 | 1.0488 | 0.6848 | 0.081* | |
| H14A | 0.7796 | 1.1960 | 0.7454 | 0.081* | |
| C15 | 1.0673 (2) | 1.3220 (3) | 0.84993 (18) | 0.0660 (7) | |
| H15C | 1.0407 | 1.4174 | 0.8742 | 0.099* | |
| H15A | 1.0896 | 1.3416 | 0.7899 | 0.099* | |
| H15B | 1.1334 | 1.2829 | 0.8929 | 0.099* |
Atomic displacement parameters (Å2)
| U11 | U22 | U33 | U12 | U13 | U23 | |
| Cl1 | 0.0603 (3) | 0.0672 (4) | 0.0591 (4) | −0.0213 (3) | 0.0158 (3) | 0.0057 (3) |
| S1 | 0.0417 (3) | 0.0445 (3) | 0.0344 (3) | −0.00324 (19) | 0.00221 (18) | 0.0015 (2) |
| O1 | 0.0592 (8) | 0.0645 (10) | 0.0361 (8) | −0.0086 (7) | 0.0025 (6) | 0.0093 (7) |
| O2 | 0.0537 (7) | 0.0392 (8) | 0.0328 (7) | 0.0012 (6) | 0.0124 (6) | −0.0022 (6) |
| O3 | 0.0484 (8) | 0.0632 (10) | 0.0446 (8) | −0.0134 (7) | 0.0174 (6) | 0.0012 (7) |
| C1 | 0.0436 (10) | 0.0360 (10) | 0.0382 (10) | −0.0011 (8) | 0.0122 (8) | 0.0004 (8) |
| C2 | 0.0542 (11) | 0.0497 (13) | 0.0315 (9) | −0.0044 (9) | 0.0074 (8) | −0.0008 (9) |
| C3 | 0.0438 (10) | 0.0453 (12) | 0.0374 (10) | −0.0059 (8) | 0.0026 (8) | −0.0015 (9) |
| C4 | 0.0362 (9) | 0.0339 (10) | 0.0377 (10) | 0.0025 (7) | 0.0078 (7) | −0.0004 (8) |
| C5 | 0.0405 (9) | 0.0382 (11) | 0.0370 (10) | 0.0060 (8) | 0.0084 (8) | 0.0046 (8) |
| C6 | 0.0443 (10) | 0.0441 (11) | 0.0343 (10) | −0.0009 (8) | 0.0087 (8) | 0.0013 (8) |
| C7 | 0.0438 (10) | 0.0370 (11) | 0.0349 (9) | 0.0048 (8) | 0.0101 (8) | 0.0029 (8) |
| C8 | 0.0373 (9) | 0.0365 (10) | 0.0339 (9) | 0.0061 (7) | 0.0078 (7) | 0.0024 (8) |
| C9 | 0.0453 (10) | 0.0518 (13) | 0.0333 (9) | 0.0036 (9) | 0.0100 (8) | 0.0032 (9) |
| C10 | 0.0472 (11) | 0.0616 (14) | 0.0350 (10) | 0.0001 (10) | 0.0019 (8) | −0.0040 (9) |
| C11 | 0.0388 (10) | 0.0536 (13) | 0.0462 (12) | −0.0048 (8) | 0.0042 (8) | −0.0020 (10) |
| C12 | 0.0374 (9) | 0.0438 (12) | 0.0394 (10) | 0.0033 (8) | 0.0116 (8) | 0.0039 (9) |
| C13 | 0.0381 (9) | 0.0337 (10) | 0.0332 (9) | 0.0049 (7) | 0.0083 (7) | −0.0010 (8) |
| C14 | 0.0607 (13) | 0.0573 (14) | 0.0412 (11) | 0.0048 (10) | 0.0009 (9) | 0.0042 (10) |
| C15 | 0.0583 (13) | 0.0776 (18) | 0.0665 (16) | −0.0211 (12) | 0.0230 (11) | 0.0056 (13) |
Geometric parameters (Å, °)
| Cl1—C1 | 1.7173 (19) | C7—C8 | 1.461 (3) |
| S1—C1 | 1.7115 (19) | C7—H7 | 0.9300 |
| S1—C4 | 1.7292 (18) | C8—C13 | 1.401 (2) |
| O1—C5 | 1.224 (2) | C8—C9 | 1.408 (3) |
| O2—C13 | 1.376 (2) | C9—C10 | 1.367 (3) |
| O2—C14 | 1.428 (2) | C9—H9 | 0.9300 |
| O3—C12 | 1.371 (2) | C10—C11 | 1.394 (3) |
| O3—C15 | 1.425 (2) | C10—H10 | 0.9300 |
| C1—C2 | 1.350 (3) | C11—C12 | 1.381 (3) |
| C2—C3 | 1.409 (3) | C11—H11 | 0.9300 |
| C2—H2 | 0.9300 | C12—C13 | 1.405 (3) |
| C3—C4 | 1.367 (2) | C14—H14C | 0.9600 |
| C3—H3 | 0.9300 | C14—H14B | 0.9600 |
| C4—C5 | 1.467 (2) | C14—H14A | 0.9600 |
| C5—C6 | 1.474 (3) | C15—H15C | 0.9600 |
| C6—C7 | 1.336 (3) | C15—H15A | 0.9600 |
| C6—H6 | 0.9300 | C15—H15B | 0.9600 |
| C1—S1—C4 | 90.57 (9) | C10—C9—C8 | 120.74 (18) |
| C13—O2—C14 | 115.51 (15) | C10—C9—H9 | 119.6 |
| C12—O3—C15 | 117.37 (17) | C8—C9—H9 | 119.6 |
| C2—C1—S1 | 113.76 (14) | C9—C10—C11 | 120.79 (18) |
| C2—C1—Cl1 | 126.07 (15) | C9—C10—H10 | 119.6 |
| S1—C1—Cl1 | 120.16 (11) | C11—C10—H10 | 119.6 |
| C1—C2—C3 | 111.04 (17) | C12—C11—C10 | 119.92 (19) |
| C1—C2—H2 | 124.5 | C12—C11—H11 | 120.0 |
| C3—C2—H2 | 124.5 | C10—C11—H11 | 120.0 |
| C4—C3—C2 | 113.79 (17) | O3—C12—C11 | 124.53 (17) |
| C4—C3—H3 | 123.1 | O3—C12—C13 | 115.79 (16) |
| C2—C3—H3 | 123.1 | C11—C12—C13 | 119.67 (17) |
| C3—C4—C5 | 131.18 (17) | O2—C13—C8 | 119.14 (16) |
| C3—C4—S1 | 110.84 (14) | O2—C13—C12 | 120.23 (16) |
| C5—C4—S1 | 117.97 (13) | C8—C13—C12 | 120.53 (17) |
| O1—C5—C4 | 119.86 (17) | O2—C14—H14C | 109.5 |
| O1—C5—C6 | 122.29 (18) | O2—C14—H14B | 109.5 |
| C4—C5—C6 | 117.85 (16) | H14C—C14—H14B | 109.5 |
| C7—C6—C5 | 121.68 (17) | O2—C14—H14A | 109.5 |
| C7—C6—H6 | 119.2 | H14C—C14—H14A | 109.5 |
| C5—C6—H6 | 119.2 | H14B—C14—H14A | 109.5 |
| C6—C7—C8 | 127.37 (18) | O3—C15—H15C | 109.5 |
| C6—C7—H7 | 116.3 | O3—C15—H15A | 109.5 |
| C8—C7—H7 | 116.3 | H15C—C15—H15A | 109.5 |
| C13—C8—C9 | 118.32 (17) | O3—C15—H15B | 109.5 |
| C13—C8—C7 | 119.08 (16) | H15C—C15—H15B | 109.5 |
| C9—C8—C7 | 122.57 (17) | H15A—C15—H15B | 109.5 |
| C4—S1—C1—C2 | 0.09 (17) | C13—C8—C9—C10 | 0.6 (3) |
| C4—S1—C1—Cl1 | 179.16 (12) | C7—C8—C9—C10 | −177.48 (18) |
| S1—C1—C2—C3 | −0.1 (2) | C8—C9—C10—C11 | 0.5 (3) |
| Cl1—C1—C2—C3 | −179.14 (15) | C9—C10—C11—C12 | −0.8 (3) |
| C1—C2—C3—C4 | 0.1 (3) | C15—O3—C12—C11 | −3.8 (3) |
| C2—C3—C4—C5 | −178.76 (19) | C15—O3—C12—C13 | 177.16 (18) |
| C2—C3—C4—S1 | −0.1 (2) | C10—C11—C12—O3 | −179.22 (18) |
| C1—S1—C4—C3 | −0.02 (15) | C10—C11—C12—C13 | −0.2 (3) |
| C1—S1—C4—C5 | 178.87 (15) | C14—O2—C13—C8 | 109.94 (19) |
| C3—C4—C5—O1 | 176.0 (2) | C14—O2—C13—C12 | −73.6 (2) |
| S1—C4—C5—O1 | −2.6 (2) | C9—C8—C13—O2 | 174.84 (15) |
| C3—C4—C5—C6 | −4.6 (3) | C7—C8—C13—O2 | −7.0 (2) |
| S1—C4—C5—C6 | 176.79 (13) | C9—C8—C13—C12 | −1.6 (3) |
| O1—C5—C6—C7 | −9.3 (3) | C7—C8—C13—C12 | 176.61 (16) |
| C4—C5—C6—C7 | 171.31 (17) | O3—C12—C13—O2 | 4.1 (3) |
| C5—C6—C7—C8 | 176.47 (17) | C11—C12—C13—O2 | −175.02 (16) |
| C6—C7—C8—C13 | 175.42 (18) | O3—C12—C13—C8 | −179.52 (16) |
| C6—C7—C8—C9 | −6.5 (3) | C11—C12—C13—C8 | 1.4 (3) |
Hydrogen-bond geometry (Å, °)
| D—H···A | D—H | H···A | D···A | D—H···A |
| C2—H2···O1i | 0.93 | 2.53 | 3.209 (2) | 130 |
| C15—H15A···O2ii | 0.96 | 2.55 | 3.423 (3) | 151 |
Symmetry codes: (i) x, −y+3/2, z+1/2; (ii) −x+2, y+1/2, −z+3/2.
Footnotes
Supplementary data and figures for this paper are available from the IUCr electronic archives (Reference: PV2439).
References
- Benmekhbi, L., Belhouas, R., Bouacida, S., Mosbah, S. & Bencharif, L. (2009). Acta Cryst. E65, o1472–o1473. [DOI] [PMC free article] [PubMed]
- Bruker. (1998). SMART, SAINT-Plus and SADABS Bruker AXS Inc., Madison, Wisconcin, USA.
- Choudary, B. M., Lakshmi, K. M., Venkat, R. C. R., Koteswara, R. K. & Figueras, F. (1999). J. Mol. Catal. A, 146, 279–279.
- Farrugia, L. J. (1997). J. Appl. Cryst. 30, 565.
- Farrugia, L. J. (1999). J. Appl. Cryst. 32, 837–838.
- Sheldrick, G. M. (2008). Acta Cryst. A64, 112–122. [DOI] [PubMed]
- Tomazela, D. M., Pupo, M. T., Passador, E. A. P., da Silva, M. F. D. G. F., Vieira, P. C., Fernandes, J. B., Rodrigues, F. E., Oliva, G. & Pirani, J. R. (2000). Phytochemistry, 55, 643–651. [DOI] [PubMed]
- Watkin, D. J., Prout, C. K. & Pearce, L. J. (1996). CAMERON Chemical Crystallography Laboratory, Oxford, England.
Associated Data
This section collects any data citations, data availability statements, or supplementary materials included in this article.
Supplementary Materials
Crystal structure: contains datablock(s) global, I. DOI: 10.1107/S1600536811037135/pv2439sup1.cif
Structure factors: contains datablock(s) I. DOI: 10.1107/S1600536811037135/pv2439Isup2.hkl
Supplementary material file. DOI: 10.1107/S1600536811037135/pv2439Isup3.cml
Additional supplementary materials: crystallographic information; 3D view; checkCIF report


