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Acta Crystallographica Section E: Structure Reports Online logoLink to Acta Crystallographica Section E: Structure Reports Online
. 2011 Sep 30;67(Pt 10):o2702. doi: 10.1107/S1600536811036816

2-{[2-(2-Hy­droxy-3-meth­oxy­benzyl­idene)hydrazin-1-yl­idene]meth­yl}-6-meth­oxy­phenol

Rong Lu a,*, Wenxia Wang a, Xingqiang Lü a, Shunsheng Zhao b
PMCID: PMC3201493  PMID: 22064826

Abstract

The title compound, C16H16N2O4, was obtained from the reaction of hydrazine hydrate and o-vanilin in absolute ethanol. The mol­ecule is almost planar (except for the methyl H atoms), with a mean deviation from the plane of 0.0259 Å. The mol­ecular structure also exhibits an approximate non-crystallographic twofold axis. Intra­molecular O—H⋯N hydrogen bonds occur. In the crystal, inter­molecular C—H⋯O hydrogen bonds generate mol­ecular zigzag sheets. The sheets stack through C—H⋯π inter­actions, leading to a three-dimensional-network.

Related literature

For the properties and applications of the title compound or similar structural compounds and their metal complexes, see: Lin et al. (2009); Davidson et al. (2006); Lin & Zeng (2006). graphic file with name e-67-o2702-scheme1.jpg

Experimental

Crystal data

  • C16H16N2O4

  • M r = 300.31

  • Monoclinic, Inline graphic

  • a = 6.3095 (14) Å

  • b = 17.405 (4) Å

  • c = 13.606 (3) Å

  • β = 95.590 (4)°

  • V = 1487.0 (6) Å3

  • Z = 4

  • Mo Kα radiation

  • μ = 0.10 mm−1

  • T = 296 K

  • 0.25 × 0.20 × 0.18 mm

Data collection

  • Bruker SMART 1K CCD area-detector diffractometer

  • Absorption correction: multi-scan (SADABS; Sheldrick, 2004) T min = 0.858, T max = 1.000

  • 7393 measured reflections

  • 2648 independent reflections

  • 1133 reflections with I > 2σ(I)

  • R int = 0.052

Refinement

  • R[F 2 > 2σ(F 2)] = 0.061

  • wR(F 2) = 0.186

  • S = 1.07

  • 2648 reflections

  • 208 parameters

  • H atoms treated by a mixture of independent and constrained refinement

  • Δρmax = 0.23 e Å−3

  • Δρmin = −0.23 e Å−3

Data collection: SMART (Bruker, 2001); cell refinement: SAINT (Bruker, 2001); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: SHELXTL (Sheldrick, 2008); software used to prepare material for publication: SHELXTL.

Supplementary Material

Crystal structure: contains datablock(s) I, global. DOI: 10.1107/S1600536811036816/fl2353sup1.cif

e-67-o2702-sup1.cif (16.7KB, cif)

Structure factors: contains datablock(s) I. DOI: 10.1107/S1600536811036816/fl2353Isup2.hkl

e-67-o2702-Isup2.hkl (130.1KB, hkl)

Supplementary material file. DOI: 10.1107/S1600536811036816/fl2353Isup3.cml

Additional supplementary materials: crystallographic information; 3D view; checkCIF report

Table 1. Hydrogen-bond geometry (Å, °).

Cg1 and Cg2 are the centroids of the C2–C7 and C10–C15 rings, respectively.

D—H⋯A D—H H⋯A DA D—H⋯A
O3—H3A⋯N2 0.91 (5) 1.82 (5) 2.640 (4) 149 (4)
O2—H2A⋯N1 0.88 (4) 1.82 (4) 2.636 (4) 153 (4)
C16—H16A⋯O4i 0.96 2.55 3.279 (5) 133
C7—H7ACg2ii 0.93 2.90 3.694 (4) 144
C13—H13ACg1iii 0.93 2.89 3.717 (4) 149

Symmetry codes: (i) Inline graphic; (ii) Inline graphic; (iii) Inline graphic.

Acknowledgments

This project was supported by the Natural Science Basic Research Plan in Shaanxi Province of China (program No. 2010JM2006, 2011JQ2011) and the Scientific Research Program funded by Shaanxi Provincial Education Department (Program No. 2008 J K440).

supplementary crystallographic information

Comment

The title compound, (I) (Fig. 1), with various chelating atoms, could coordinate with many transition metals (Davidson et al., 2006) and lanthanides (Lin and Zeng, 2006; Lin et al. , 2009) to form functional complexes. The molecule crystallizes in the monoclinic space group P21/c and appears to be almost completely planar (except for the methyl hydrogen atoms) with a mean deviation from the plane ooff 0.0259 Å. The molecule also exhibits a non-crystallographic 2-fold axis. There are intramolecular O—H···N hydrogen bonds, intermolecular C—H···O hydrogen bonds and C—H···π hydrogen bonds. Molecules are linked by the C—H···O hydrogen bonds, generating molecular zigzag sheets, as shown in Fig. 2. The C—H···π hydrogen bonds and stacking interaction of these sheets leads to a three-dimensional-network. (Fig. 3).

Experimental

The title compound was obtained from the reaction of hydrazine hydrate and o-vanilin in absolute ethanol. Hydrazine hydrate (500 mg, 10 mmol) was added to a solution of o-vanilin (3.04 g, 20 mmol) in absolute ethanol (200 ml) and heated to reflux for 2 h. The resulting solution was allowed to evaporate at rt to give a yellow crystal, which was collected by filtration and dried under vacumn;; yield 89.3%. The single-crystal of the title compound suitble for X-ray diffraction was obtained by recrystalization from absolute ethanol.

Refinement

H atoms bonded to O atoms were refined isotropically without restraints, and with Uiso(H) = 1.2Ueq(O). Other H atoms were positioned geometrically and refined using a riding model with C—H = 0.95–0.99 Å and with Uiso(H) = 1.2 (1.5 for methyl groups) times Ueq(C).

Figures

Fig. 1.

Fig. 1.

The molecular structure of (I), with atom labels and 30% probability displacement ellipsoids for non-H atoms.

Fig. 2.

Fig. 2.

The packing of (I), showing one chain of molecules connected by C—H···O hydrogen bonds (dashed lines). H atoms not involved in hydrogen bonding have been omitted.

Fig. 3.

Fig. 3.

The packing of (I), showing one layer of molecules connected by stacking interaction.

Crystal data

C16H16N2O4 F(000) = 632
Mr = 300.31 Dx = 1.341 Mg m3
Monoclinic, P21/c Mo Kα radiation, λ = 0.71073 Å
a = 6.3095 (14) Å Cell parameters from 8451 reflections
b = 17.405 (4) Å θ = 1.9–26.6°
c = 13.606 (3) Å µ = 0.10 mm1
β = 95.590 (4)° T = 296 K
V = 1487.0 (6) Å3 Block, yellow
Z = 4 0.25 × 0.20 × 0.18 mm

Data collection

Bruker SMART 1K CCD area-detector diffractometer 2648 independent reflections
Radiation source: fine-focus sealed tube 1133 reflections with I > 2σ(I)
graphite Rint = 0.052
thin–slice ω scans θmax = 25.1°, θmin = 1.9°
Absorption correction: multi-scan (SADABS; Sheldrick, 2004) h = −6→7
Tmin = 0.858, Tmax = 1.000 k = −18→20
7393 measured reflections l = −15→16

Refinement

Refinement on F2 Primary atom site location: structure-invariant direct methods
Least-squares matrix: full Secondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.061 Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.186 H atoms treated by a mixture of independent and constrained refinement
S = 1.07 w = 1/[σ2(Fo2) + (0.0677P)2] where P = (Fo2 + 2Fc2)/3
2648 reflections (Δ/σ)max < 0.001
208 parameters Δρmax = 0.23 e Å3
0 restraints Δρmin = −0.23 e Å3

Special details

Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.

Fractional atomic coordinates and isotropic or equivalent isotropic displacement parameters (Å2)

x y z Uiso*/Ueq
O2 1.1229 (5) 0.30718 (16) 0.11097 (19) 0.0657 (8)
O3 0.3751 (4) 0.44682 (15) 0.36771 (19) 0.0659 (8)
N2 0.6605 (5) 0.39741 (18) 0.2529 (2) 0.0603 (9)
N1 0.8399 (5) 0.35841 (17) 0.2254 (2) 0.0593 (9)
C4 1.1395 (6) 0.28216 (19) 0.2861 (3) 0.0529 (10)
O1 1.4697 (4) 0.23030 (15) 0.09342 (18) 0.0708 (8)
C2 1.4056 (6) 0.2325 (2) 0.1861 (3) 0.0533 (10)
O4 0.0317 (4) 0.52385 (14) 0.38754 (18) 0.0696 (8)
C14 0.0966 (6) 0.5236 (2) 0.2954 (3) 0.0555 (10)
C3 1.2189 (6) 0.27497 (19) 0.1943 (3) 0.0513 (9)
C15 0.2831 (6) 0.4809 (2) 0.2850 (3) 0.0532 (10)
C13 −0.0034 (6) 0.5612 (2) 0.2144 (3) 0.0628 (11)
H13A −0.1247 0.5904 0.2210 0.075*
C10 0.3625 (6) 0.4756 (2) 0.1936 (3) 0.0570 (10)
C8 0.9494 (6) 0.3256 (2) 0.2985 (3) 0.0585 (11)
H8A 0.9043 0.3300 0.3613 0.070*
C11 0.2542 (7) 0.5129 (2) 0.1132 (3) 0.0702 (12)
H11A 0.3043 0.5086 0.0514 0.084*
C5 1.2488 (6) 0.2463 (2) 0.3685 (3) 0.0638 (11)
H5A 1.1981 0.2512 0.4301 0.077*
C7 1.5070 (6) 0.1973 (2) 0.2683 (3) 0.0624 (11)
H7A 1.6292 0.1684 0.2627 0.075*
C9 0.5516 (6) 0.4314 (2) 0.1809 (3) 0.0633 (11)
H9A 0.5963 0.4273 0.1179 0.076*
C6 1.4279 (7) 0.2047 (2) 0.3592 (3) 0.0674 (11)
H6A 1.4980 0.1810 0.4144 0.081*
C16 −0.1522 (6) 0.5682 (2) 0.4042 (3) 0.0783 (14)
H16A −0.1799 0.5635 0.4721 0.117*
H16B −0.2728 0.5497 0.3624 0.117*
H16C −0.1274 0.6211 0.3893 0.117*
C12 0.0759 (7) 0.5556 (2) 0.1232 (3) 0.0731 (12)
H12A 0.0079 0.5810 0.0688 0.088*
C1 1.6443 (6) 0.1816 (2) 0.0767 (3) 0.0817 (14)
H1B 1.6730 0.1854 0.0089 0.123*
H1C 1.6095 0.1294 0.0914 0.123*
H1D 1.7680 0.1972 0.1186 0.123*
H3A 0.490 (8) 0.421 (3) 0.349 (4) 0.128 (19)*
H2A 1.007 (7) 0.328 (2) 0.131 (3) 0.096 (16)*

Atomic displacement parameters (Å2)

U11 U22 U33 U12 U13 U23
O2 0.0594 (19) 0.080 (2) 0.0581 (18) 0.0130 (15) 0.0097 (15) 0.0022 (14)
O3 0.0600 (19) 0.0752 (19) 0.0638 (19) 0.0177 (15) 0.0130 (15) 0.0115 (14)
N2 0.052 (2) 0.060 (2) 0.071 (2) 0.0020 (16) 0.0164 (17) −0.0059 (17)
N1 0.049 (2) 0.060 (2) 0.071 (2) 0.0004 (16) 0.0146 (18) −0.0089 (17)
C4 0.055 (2) 0.051 (2) 0.053 (2) −0.0052 (18) 0.0082 (19) −0.0062 (18)
O1 0.0661 (18) 0.0868 (19) 0.0619 (18) 0.0217 (15) 0.0187 (14) 0.0032 (14)
C2 0.050 (2) 0.055 (2) 0.055 (2) 0.0014 (19) 0.0069 (19) −0.0041 (18)
O4 0.0630 (18) 0.0796 (19) 0.0691 (18) 0.0180 (15) 0.0214 (14) 0.0114 (14)
C14 0.049 (2) 0.055 (2) 0.063 (3) −0.0023 (19) 0.008 (2) 0.0028 (19)
C3 0.050 (2) 0.052 (2) 0.052 (2) −0.0001 (19) 0.0042 (18) −0.0021 (18)
C15 0.052 (2) 0.051 (2) 0.056 (2) −0.0026 (19) 0.0052 (19) 0.0064 (18)
C13 0.056 (3) 0.059 (3) 0.073 (3) 0.0026 (19) 0.003 (2) 0.007 (2)
C10 0.054 (2) 0.054 (2) 0.064 (3) −0.0039 (19) 0.009 (2) −0.0012 (19)
C8 0.056 (3) 0.059 (2) 0.062 (3) −0.006 (2) 0.015 (2) −0.011 (2)
C11 0.071 (3) 0.081 (3) 0.059 (3) −0.003 (2) 0.010 (2) 0.002 (2)
C5 0.071 (3) 0.068 (3) 0.053 (3) −0.007 (2) 0.008 (2) −0.007 (2)
C7 0.058 (3) 0.059 (3) 0.070 (3) 0.008 (2) 0.005 (2) 0.000 (2)
C9 0.065 (3) 0.060 (3) 0.067 (3) −0.005 (2) 0.020 (2) −0.008 (2)
C6 0.074 (3) 0.068 (3) 0.059 (3) 0.010 (2) 0.001 (2) 0.0008 (19)
C16 0.054 (3) 0.093 (3) 0.091 (3) 0.018 (2) 0.021 (2) 0.006 (2)
C12 0.067 (3) 0.079 (3) 0.071 (3) 0.005 (2) −0.005 (2) 0.009 (2)
C1 0.065 (3) 0.098 (3) 0.085 (3) 0.019 (3) 0.023 (2) −0.004 (2)

Geometric parameters (Å, °)

O2—C3 1.354 (4) C13—H13A 0.9300
O2—H2A 0.88 (4) C10—C11 1.392 (5)
O3—C15 1.352 (4) C10—C9 1.445 (5)
O3—H3A 0.91 (5) C8—H8A 0.9300
N2—C9 1.285 (4) C11—C12 1.366 (5)
N2—N1 1.402 (4) C11—H11A 0.9300
N1—C8 1.288 (4) C5—C6 1.359 (5)
C4—C3 1.396 (4) C5—H5A 0.9300
C4—C5 1.404 (5) C7—C6 1.384 (5)
C4—C8 1.441 (5) C7—H7A 0.9300
O1—C2 1.361 (4) C9—H9A 0.9300
O1—C1 1.426 (4) C6—H6A 0.9300
C2—C7 1.377 (5) C16—H16A 0.9600
C2—C3 1.404 (5) C16—H16B 0.9600
O4—C14 1.357 (4) C16—H16C 0.9600
O4—C16 1.430 (4) C12—H12A 0.9300
C14—C13 1.380 (5) C1—H1B 0.9600
C14—C15 1.411 (5) C1—H1C 0.9600
C15—C10 1.388 (5) C1—H1D 0.9600
C13—C12 1.385 (5)
C3—O2—H2A 103 (3) C12—C11—C10 121.4 (4)
C15—O3—H3A 106 (3) C12—C11—H11A 119.3
C9—N2—N1 113.9 (3) C10—C11—H11A 119.3
C8—N1—N2 113.3 (3) C6—C5—C4 120.7 (3)
C3—C4—C5 118.9 (3) C6—C5—H5A 119.6
C3—C4—C8 121.8 (4) C4—C5—H5A 119.6
C5—C4—C8 119.3 (3) C2—C7—C6 120.3 (4)
C2—O1—C1 117.9 (3) C2—C7—H7A 119.8
O1—C2—C7 125.7 (3) C6—C7—H7A 119.8
O1—C2—C3 114.6 (3) N2—C9—C10 122.7 (3)
C7—C2—C3 119.8 (3) N2—C9—H9A 118.6
C14—O4—C16 118.1 (3) C10—C9—H9A 118.6
O4—C14—C13 125.5 (3) C5—C6—C7 120.6 (4)
O4—C14—C15 115.1 (3) C5—C6—H6A 119.7
C13—C14—C15 119.4 (3) C7—C6—H6A 119.7
O2—C3—C4 122.8 (3) O4—C16—H16A 109.5
O2—C3—C2 117.5 (3) O4—C16—H16B 109.5
C4—C3—C2 119.7 (4) H16A—C16—H16B 109.5
O3—C15—C10 123.6 (3) O4—C16—H16C 109.5
O3—C15—C14 116.3 (3) H16A—C16—H16C 109.5
C10—C15—C14 120.1 (4) H16B—C16—H16C 109.5
C14—C13—C12 120.3 (4) C11—C12—C13 120.0 (4)
C14—C13—H13A 119.8 C11—C12—H12A 120.0
C12—C13—H13A 119.8 C13—C12—H12A 120.0
C15—C10—C11 118.7 (4) O1—C1—H1B 109.5
C15—C10—C9 121.1 (4) O1—C1—H1C 109.5
C11—C10—C9 120.1 (3) H1B—C1—H1C 109.5
N1—C8—C4 122.2 (3) O1—C1—H1D 109.5
N1—C8—H8A 118.9 H1B—C1—H1D 109.5
C4—C8—H8A 118.9 H1C—C1—H1D 109.5

Hydrogen-bond geometry (Å, °)

Cg1 and Cg2 are the centroids of the C2–C7 and C10–C15 rings, respectively.
D—H···A D—H H···A D···A D—H···A
O3—H3A···N2 0.91 (5) 1.82 (5) 2.640 (4) 149 (4)
O2—H2A···N1 0.88 (4) 1.82 (4) 2.636 (4) 153 (4)
C16—H16A···O4i 0.96 2.55 3.279 (5) 133
C7—H7A···Cg2ii 0.93 2.90 3.694 (4) 144
C13—H13A···Cg1iii 0.93 2.89 3.717 (4) 149

Symmetry codes: (i) −x, −y+1, −z+1; (ii) −x+2, y−1/2, −z+1/2; (iii) −x+1, y+1/2, −z+1/2.

Footnotes

Supplementary data and figures for this paper are available from the IUCr electronic archives (Reference: FL2353).

References

  1. Bruker (2001). SMART and SAINT Bruker AXS Inc., Madison, Wisconsin, USA.
  2. Davidson, M. G., Johnson, A. L., Jones, M. D., Lunn, M. D. & Mahon, M. F. (2006). Eur. J. Inorg. Chem. 21, 4449–4454.
  3. Lin, P.-H., Burchell, T. J., Ungur, L., Chibotaru, L. F., Wernsdorfer, W. & Murugesu, M. (2009). Angew. Chem. Int. Ed. 48, 9489–9452. [DOI] [PubMed]
  4. Lin, Z.-D. & Zeng, W. (2006). Acta Cryst. E62, m1074–m1076.
  5. Sheldrick, G. M. (2004). SADABS University of Göttingen, Germany.
  6. Sheldrick, G. M. (2008). Acta Cryst. A64, 112–122. [DOI] [PubMed]

Associated Data

This section collects any data citations, data availability statements, or supplementary materials included in this article.

Supplementary Materials

Crystal structure: contains datablock(s) I, global. DOI: 10.1107/S1600536811036816/fl2353sup1.cif

e-67-o2702-sup1.cif (16.7KB, cif)

Structure factors: contains datablock(s) I. DOI: 10.1107/S1600536811036816/fl2353Isup2.hkl

e-67-o2702-Isup2.hkl (130.1KB, hkl)

Supplementary material file. DOI: 10.1107/S1600536811036816/fl2353Isup3.cml

Additional supplementary materials: crystallographic information; 3D view; checkCIF report


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