Abstract
In the title compound, Na2[Co(CH4O6P2)2(H2O)2]·2H2O, the asymmetric unit is composed of one methylenediphosphonate ligand and one water molecule, which both are coordinated to a CoII atom, as well as a non-coordinated water molecule and a sodium cation. The CoII atom occupies a special position on a crystallographic inversion centre. The slightly distorted CoIIO6 octahedral coordination environment is composed of two bidentate methylenediphosphonate ligands and two coordinated water molecules in trans positions. The sodium ion is octahedrally coordinated to six O atoms with Na—O distances ranging from 2.3149 (12) to 2.6243 (12) Å. An extensive three-dimensional network of intermolecular as well as intramolecular O—H⋯O and C—H⋯O hydrogen bonding interacions is present.
Related literature
For general background to organic diphosphonic acids, see: Vega et al. (1996 ▶). For related structures, see: Bon et al. (2010 ▶); DeLaMatter et al. (1973 ▶); Harmony et al. (1984 ▶); Jurisson et al. (1983 ▶); Van der Merwe et al. (2010 ▶). For bond lengths and angles in related structures, see: Bao et al. (2003 ▶); Cao et al. (2007 ▶); Gong et al. (2006 ▶); Van der Merwe et al. (2009 ▶); Visser et al. (2010 ▶); Yin et al. (2003 ▶).
Experimental
Crystal data
Na2[Co(CH4O6P2)2(H2O)2]·2H2O
M r = 524.94
Monoclinic,
a = 6.8694 (2) Å
b = 13.2860 (4) Å
c = 8.3541 (3) Å
β = 91.375 (1)°
V = 762.23 (4) Å3
Z = 2
Mo Kα radiation
μ = 1.69 mm−1
T = 100 K
0.52 × 0.24 × 0.09 mm
Data collection
Bruker APEXII CCD diffractometer
Absorption correction: multi-scan (SADABS, Bruker, 2007 ▶) T min = 0.474, T max = 0.863
8742 measured reflections
1901 independent reflections
1838 reflections with I > 2σ(I)
R int = 0.022
Refinement
R[F 2 > 2σ(F 2)] = 0.019
wR(F 2) = 0.055
S = 1.13
1901 reflections
146 parameters
7 restraints
All H-atom parameters refined
Δρmax = 0.36 e Å−3
Δρmin = −0.57 e Å−3
Data collection: APEX2 (Bruker, 2007 ▶); cell refinement: SAINT-Plus (Bruker, 2007 ▶); data reduction: SAINT-Plus; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: DIAMOND (Brandenburg & Putz, 2005 ▶); software used to prepare material for publication: WinGX (Farrugia, 1999 ▶).
Supplementary Material
Crystal structure: contains datablock(s) global, I. DOI: 10.1107/S1600536811038530/wm2520sup1.cif
Structure factors: contains datablock(s) I. DOI: 10.1107/S1600536811038530/wm2520Isup2.hkl
Additional supplementary materials: crystallographic information; 3D view; checkCIF report
Table 1. Selected bond lengths (Å).
| Co1—O1 | 2.0886 (10) |
| Co1—O7 | 2.0900 (10) |
| Co1—O2i | 2.1141 (10) |
Symmetry code: (i)
.
Table 2. Hydrogen-bond geometry (Å, °).
| D—H⋯A | D—H | H⋯A | D⋯A | D—H⋯A |
|---|---|---|---|---|
| O8—H6⋯O7 | 0.86 (1) | 1.88 (1) | 2.7154 (15) | 164 (2) |
| C1—H4⋯O1i | 0.92 (2) | 2.54 (2) | 3.1449 (17) | 123.9 (15) |
| C1—H3⋯O4ii | 0.92 (2) | 2.53 (2) | 3.4366 (17) | 168.4 (17) |
| O3—H2⋯O2ii | 0.81 (3) | 1.84 (3) | 2.6394 (14) | 176 (3) |
| O1—H1A⋯O6iii | 0.83 (2) | 1.98 (2) | 2.8008 (14) | 173 (2) |
| O8—H7⋯O1iii | 0.83 (1) | 2.57 (2) | 3.2763 (15) | 143 (2) |
| O1—H1B⋯O4iv | 0.83 (2) | 1.84 (2) | 2.6634 (15) | 175 (2) |
| O5—H5⋯O6v | 0.82 (2) | 1.81 (2) | 2.6272 (14) | 177 (3) |
Symmetry codes: (i)
; (ii)
; (iii)
; (iv)
; (v)
.
Acknowledgments
The University of the Free State and Professor A. Roodt are gratefully acknowledged for financial support.
supplementary crystallographic information
Comment
The title compound forms part of an ongoing study involving methylene diphosphonate, and its coordination to various metal cores.
In the past 20 years numerous diphosphonate compounds have undergone intensive pharmacological studies primarily because of their possible use in treating bone diseases. This can be attributed to the fact that bisphosphonic acids are excellent anti-hypercalcemics and have a high affinity for bone tissue (Vega et al., 1996).
In the title compound, Na2[Co(CH4O6P2)2(H2O)2].2H2O, (Fig. 1, Table 1), the asymmetric unit is composed of one methylene diphosphonate ligand and one aqueous molecule which are coordinated to a Co(II) atom, as well as a non-coordinated aqueous solvent molecule and a sodium cation. The Co(II) atom occupies a special position on a crystallographic inversion centre. The sodium ion is octahedrally coordinated to six oxygen atoms with Na—O distances ranging from 2.3149 (12) to 2.6243 (12) Å. The octahedral geometry around the CoII metal center is slightly distorted with O—Co—O angles ranging between 86.63 (4) ° and 93.14 (4) °. The Co—O bond lengths vary between 2.0886 (10) and 2.1141 (10) Å. These distances correspond to literature values (Bao et al. (2003); Cao et al. (2007); Gong et al. (2006); Yin et al. (2003); Van der Merwe et al. (2009); Visser et al. (2010).
A three-dimensional network is provided by numerous C—H–O and O—H–O hydrogen bonds (Figs. 2, 3 and Table 2).
Experimental
CoCl2.6H2O (0,1696 g, 0,00071 mol) and methylene diphosphonate (0,3726 g, 0,00212 mol) were dissolved in distilled water (5 cm3). Sodium hydroxide (3 cm3, 1 M) was gradually added to the solution mixture which was heated for three days at 413 K. The final pH of the solution was adjusted to 1.23 with hydrochloric acid. Pink crystals, suitable for X-ray diffraction, were obtained. (Yield: 27.6%)
Refinement
All H atoms were located from difference Fourier maps and were refined isotropically without further restraints. The highest residual electron density was located 0.78 Å from C1.
Figures
Fig. 1.
Representation of the title compound, showing the numbering scheme and displacement ellipsoids drawn at the 50% probability level. [Symmetry code: (i) 1-x, 1-y, -z].
Fig. 2.
The crystal packing of the title compound viewed along the a axis. Green dashed lines are employed to represent intermolecular hydrogen bonding and an orange dashed line was used to displace the intramolecular hydrogen bonding.
Fig. 3.
The packing diagram of the title compound viewed along the b axis. Green dashed lines are utilized to display the extensive intermolecular hydrogen bonding.
Crystal data
| Na2[Co(CH4O6P2)2(H2O)2]·2H2O | F(000) = 530 |
| Mr = 524.94 | Dx = 2.287 Mg m−3 |
| Monoclinic, P21/c | Mo Kα radiation, λ = 0.71073 Å |
| Hall symbol: -P 2ybc | Cell parameters from 6202 reflections |
| a = 6.8694 (2) Å | θ = 2.9–28.4° |
| b = 13.2860 (4) Å | µ = 1.69 mm−1 |
| c = 8.3541 (3) Å | T = 100 K |
| β = 91.375 (1)° | Plate, pink |
| V = 762.23 (4) Å3 | 0.52 × 0.24 × 0.09 mm |
| Z = 2 |
Data collection
| Bruker APEXII CCD diffractometer | 1838 reflections with I > 2σ(I) |
| phi and ω scans | Rint = 0.022 |
| Absorption correction: multi-scan (SADABS, Bruker, 2007) | θmax = 28.4°, θmin = 3.1° |
| Tmin = 0.474, Tmax = 0.863 | h = −8→9 |
| 8742 measured reflections | k = −17→16 |
| 1901 independent reflections | l = −11→8 |
Refinement
| Refinement on F2 | 7 restraints |
| Least-squares matrix: full | All H-atom parameters refined |
| R[F2 > 2σ(F2)] = 0.019 | w = 1/[σ2(Fo2) + (0.0289P)2 + 0.4299P] where P = (Fo2 + 2Fc2)/3 |
| wR(F2) = 0.055 | (Δ/σ)max = 0.001 |
| S = 1.13 | Δρmax = 0.36 e Å−3 |
| 1901 reflections | Δρmin = −0.57 e Å−3 |
| 146 parameters |
Special details
| Geometry. All s.u.'s (except the s.u. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell s.u.'s are taken into account individually in the estimation of s.u.'s in distances, angles and torsion angles; correlations between s.u.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell s.u.'s is used for estimating s.u.'s involving l.s. planes. |
Fractional atomic coordinates and isotropic or equivalent isotropic displacement parameters (Å2)
| x | y | z | Uiso*/Ueq | ||
| Co1 | 0.5 | 0.5 | 0.5 | 0.00488 (8) | |
| P1 | 0.43774 (5) | 0.30632 (3) | 0.26142 (4) | 0.00528 (9) | |
| P2 | 0.17626 (5) | 0.48657 (3) | 0.20454 (4) | 0.00578 (9) | |
| Na1 | 0.06611 (8) | 0.75775 (4) | 0.22722 (7) | 0.01006 (13) | |
| O1 | 0.33424 (15) | 0.45566 (8) | 0.69412 (12) | 0.0092 (2) | |
| O2 | 0.52678 (14) | 0.35119 (7) | 0.41366 (11) | 0.00758 (19) | |
| O3 | 0.61219 (15) | 0.25484 (8) | 0.17312 (12) | 0.0084 (2) | |
| O4 | 0.27445 (14) | 0.23364 (8) | 0.28565 (12) | 0.0087 (2) | |
| O5 | 0.17550 (15) | 0.58645 (8) | 0.10142 (12) | 0.0091 (2) | |
| O6 | −0.02026 (14) | 0.43517 (8) | 0.18700 (11) | 0.00828 (19) | |
| O7 | 0.23609 (15) | 0.51625 (8) | 0.37290 (12) | 0.0081 (2) | |
| O8 | 0.02069 (15) | 0.67436 (8) | 0.47388 (12) | 0.0114 (2) | |
| C1 | 0.3604 (2) | 0.40539 (10) | 0.12696 (15) | 0.0072 (2) | |
| H1A | 0.241 (3) | 0.4908 (15) | 0.722 (3) | 0.025 (6)* | |
| H1B | 0.321 (3) | 0.3969 (13) | 0.726 (3) | 0.029 (6)* | |
| H2 | 0.582 (4) | 0.225 (2) | 0.093 (3) | 0.037 (7)* | |
| H3 | 0.320 (3) | 0.3732 (15) | 0.035 (2) | 0.015 (5)* | |
| H4 | 0.469 (3) | 0.4420 (15) | 0.103 (2) | 0.012 (4)* | |
| H5 | 0.131 (4) | 0.5780 (19) | 0.011 (2) | 0.038 (7)* | |
| H6 | 0.092 (3) | 0.6221 (13) | 0.461 (3) | 0.035 (5)* | |
| H7 | −0.091 (2) | 0.6498 (18) | 0.474 (3) | 0.035 (5)* |
Atomic displacement parameters (Å2)
| U11 | U22 | U33 | U12 | U13 | U23 | |
| Co1 | 0.00514 (14) | 0.00495 (14) | 0.00451 (13) | −0.00021 (8) | −0.00063 (9) | −0.00021 (8) |
| P1 | 0.00519 (16) | 0.00539 (17) | 0.00524 (15) | 0.00033 (12) | −0.00009 (11) | −0.00059 (11) |
| P2 | 0.00623 (17) | 0.00582 (17) | 0.00523 (17) | 0.00061 (12) | −0.00118 (12) | −0.00022 (11) |
| Na1 | 0.0087 (3) | 0.0113 (3) | 0.0102 (3) | 0.0003 (2) | −0.0008 (2) | 0.0009 (2) |
| O1 | 0.0100 (5) | 0.0072 (5) | 0.0105 (4) | 0.0011 (4) | 0.0035 (4) | 0.0019 (4) |
| O2 | 0.0107 (5) | 0.0061 (5) | 0.0059 (4) | 0.0008 (4) | −0.0019 (3) | −0.0008 (3) |
| O3 | 0.0068 (5) | 0.0104 (5) | 0.0081 (4) | 0.0017 (4) | −0.0002 (4) | −0.0032 (4) |
| O4 | 0.0072 (5) | 0.0074 (5) | 0.0116 (4) | −0.0008 (4) | 0.0001 (3) | 0.0000 (4) |
| O5 | 0.0121 (5) | 0.0067 (5) | 0.0084 (4) | 0.0001 (4) | −0.0035 (4) | 0.0013 (4) |
| O6 | 0.0071 (4) | 0.0094 (5) | 0.0083 (4) | −0.0004 (4) | −0.0013 (3) | −0.0002 (4) |
| O7 | 0.0080 (5) | 0.0098 (5) | 0.0064 (4) | 0.0021 (4) | −0.0021 (3) | −0.0015 (3) |
| O8 | 0.0091 (5) | 0.0141 (5) | 0.0109 (5) | 0.0018 (4) | 0.0006 (4) | −0.0003 (4) |
| C1 | 0.0076 (6) | 0.0077 (6) | 0.0061 (6) | 0.0001 (5) | 0.0000 (5) | 0.0000 (5) |
Geometric parameters (Å, °)
| Co1—O1 | 2.0886 (10) | Na1—O3iii | 2.3431 (12) |
| Co1—O1i | 2.0886 (10) | Na1—O4iv | 2.3612 (11) |
| Co1—O7 | 2.0900 (10) | Na1—O6iv | 2.4860 (12) |
| Co1—O7 | 2.0900 (10) | Na1—O5 | 2.6243 (12) |
| Co1—O7i | 2.0900 (10) | O1—H1A | 0.831 (16) |
| Co1—O2 | 2.1141 (10) | O1—H1B | 0.830 (16) |
| Co1—O2i | 2.1141 (10) | O3—Na1v | 2.3431 (12) |
| P1—O4 | 1.4975 (10) | O3—H2 | 0.81 (3) |
| P1—O2 | 1.5198 (10) | O4—Na1vi | 2.3612 (11) |
| P1—O3 | 1.5781 (10) | O5—H5 | 0.815 (16) |
| P1—C1 | 1.8021 (14) | O6—Na1vi | 2.4860 (12) |
| P2—O7 | 1.5083 (10) | O8—Na1vii | 2.3149 (12) |
| P2—O7 | 1.5083 (10) | O8—H6 | 0.856 (13) |
| P2—O6 | 1.5169 (10) | O8—H7 | 0.834 (13) |
| P2—O5 | 1.5820 (10) | C1—H3 | 0.92 (2) |
| P2—C1 | 1.7954 (14) | C1—H4 | 0.92 (2) |
| Na1—O8ii | 2.3149 (12) | ||
| O1—Co1—O1i | 180 | O5—P2—C1 | 107.49 (6) |
| O1—Co1—O7 | 86.63 (4) | O8ii—Na1—O3iii | 115.88 (4) |
| O1i—Co1—O7 | 93.37 (4) | O8ii—Na1—O4iv | 84.24 (4) |
| O1—Co1—O7 | 86.63 (4) | O3iii—Na1—O4iv | 159.88 (4) |
| O1i—Co1—O7 | 93.37 (4) | O8ii—Na1—O6iv | 83.04 (4) |
| O1—Co1—O7i | 93.37 (4) | O3iii—Na1—O6iv | 92.19 (4) |
| O1i—Co1—O7i | 86.63 (4) | O4iv—Na1—O6iv | 90.55 (4) |
| O7—Co1—O7i | 180 | O8ii—Na1—O5 | 90.31 (4) |
| O7—Co1—O7i | 180 | O3iii—Na1—O5 | 81.45 (4) |
| O1—Co1—O2 | 93.14 (4) | O4iv—Na1—O5 | 99.03 (4) |
| O1i—Co1—O2 | 86.86 (4) | O6iv—Na1—O5 | 167.75 (4) |
| O7—Co1—O2 | 90.28 (4) | Co1—O1—H1A | 119.7 (16) |
| O7—Co1—O2 | 90.28 (4) | Co1—O1—H1B | 125.4 (16) |
| O7i—Co1—O2 | 89.73 (4) | H1A—O1—H1B | 110 (2) |
| O1—Co1—O2i | 86.86 (4) | P1—O2—Co1 | 128.01 (6) |
| O1i—Co1—O2i | 93.14 (4) | P1—O3—Na1v | 123.17 (6) |
| O7—Co1—O2i | 89.72 (4) | P1—O3—H2 | 114.8 (19) |
| O7—Co1—O2i | 89.72 (4) | Na1v—O3—H2 | 122.0 (19) |
| O7i—Co1—O2i | 90.27 (4) | P1—O4—Na1vi | 130.61 (6) |
| O2—Co1—O2i | 180.00 (5) | P2—O5—Na1 | 120.44 (5) |
| O4—P1—O2 | 115.31 (6) | P2—O5—H5 | 112.6 (18) |
| O4—P1—O3 | 111.31 (6) | Na1—O5—H5 | 112.6 (18) |
| O2—P1—O3 | 105.44 (6) | P2—O6—Na1vi | 121.18 (5) |
| O4—P1—C1 | 110.17 (6) | P2—O7—Co1 | 131.33 (6) |
| O2—P1—C1 | 109.98 (6) | Na1vii—O8—H6 | 111.4 (16) |
| O3—P1—C1 | 103.94 (6) | Na1vii—O8—H7 | 104.6 (17) |
| O7—P2—O6 | 115.45 (6) | H6—O8—H7 | 102 (2) |
| O7—P2—O6 | 115.45 (6) | P2—C1—P1 | 114.42 (7) |
| O7—P2—O5 | 106.61 (6) | P2—C1—H3 | 112.4 (12) |
| O7—P2—O5 | 106.61 (6) | P1—C1—H3 | 105.2 (12) |
| O6—P2—O5 | 109.49 (6) | P2—C1—H4 | 110.3 (12) |
| O7—P2—C1 | 108.36 (6) | P1—C1—H4 | 107.1 (12) |
| O7—P2—C1 | 108.36 (6) | H3—C1—H4 | 107.0 (17) |
| O6—P2—C1 | 109.14 (6) | ||
| O4—P1—O2—Co1 | −108.16 (8) | O6iv—Na1—O5—P2 | 140.99 (16) |
| O3—P1—O2—Co1 | 128.63 (7) | Na1ii—Na1—O5—P2 | −161.48 (7) |
| C1—P1—O2—Co1 | 17.13 (9) | Na1vii—Na1—O5—P2 | 16.59 (7) |
| O1—Co1—O2—P1 | 111.59 (7) | O7—P2—O6—Na1vi | −74.24 (8) |
| O1i—Co1—O2—P1 | −68.41 (7) | O7—P2—O6—Na1vi | −74.24 (8) |
| O7—Co1—O2—P1 | 24.95 (7) | O5—P2—O6—Na1vi | 165.48 (5) |
| O7—Co1—O2—P1 | 24.95 (7) | C1—P2—O6—Na1vi | 48.07 (7) |
| O7i—Co1—O2—P1 | −155.05 (7) | O6—P2—O7—Co1 | 134.82 (7) |
| O4—P1—O3—Na1v | −126.78 (7) | O5—P2—O7—Co1 | −103.34 (8) |
| O2—P1—O3—Na1v | −1.06 (8) | C1—P2—O7—Co1 | 12.09 (10) |
| C1—P1—O3—Na1v | 114.66 (7) | O1—Co1—O7—P2 | −136.95 (8) |
| O2—P1—O4—Na1vi | 97.12 (8) | O1i—Co1—O7—P2 | 43.05 (8) |
| O3—P1—O4—Na1vi | −142.84 (7) | O2—Co1—O7—P2 | −43.82 (8) |
| C1—P1—O4—Na1vi | −28.09 (9) | O2i—Co1—O7—P2 | 136.18 (8) |
| O7—P2—O5—Na1 | −35.73 (8) | O7—P2—C1—P1 | 46.92 (9) |
| O7—P2—O5—Na1 | −35.73 (8) | O7—P2—C1—P1 | 46.92 (9) |
| O6—P2—O5—Na1 | 89.81 (7) | O6—P2—C1—P1 | −79.55 (8) |
| C1—P2—O5—Na1 | −151.75 (6) | O5—P2—C1—P1 | 161.78 (7) |
| O8ii—Na1—O5—P2 | −162.13 (6) | O4—P1—C1—P2 | 66.52 (9) |
| O3iii—Na1—O5—P2 | 81.72 (6) | O2—P1—C1—P2 | −61.67 (9) |
| O4iv—Na1—O5—P2 | −77.92 (7) | O3—P1—C1—P2 | −174.14 (7) |
Symmetry codes: (i) −x+1, −y+1, −z+1; (ii) x, −y+3/2, z−1/2; (iii) −x+1, y+1/2, −z+1/2; (iv) −x, y+1/2, −z+1/2; (v) −x+1, y−1/2, −z+1/2; (vi) −x, y−1/2, −z+1/2; (vii) x, −y+3/2, z+1/2.
Hydrogen-bond geometry (Å, °)
| D—H···A | D—H | H···A | D···A | D—H···A |
| O8—H6···O7 | 0.86 (1) | 1.88 (1) | 2.7154 (15) | 164 (2) |
| C1—H4···O1i | 0.92 (2) | 2.54 (2) | 3.1449 (17) | 123.9 (15) |
| C1—H3···O4viii | 0.92 (2) | 2.53 (2) | 3.4366 (17) | 168.4 (17) |
| O3—H2···O2viii | 0.81 (3) | 1.84 (3) | 2.6394 (14) | 176 (3) |
| O1—H1A···O6ix | 0.83 (2) | 1.98 (2) | 2.8008 (14) | 173 (2) |
| O8—H7···O1ix | 0.83 (1) | 2.57 (2) | 3.2763 (15) | 143 (2) |
| O1—H1B···O4x | 0.83 (2) | 1.84 (2) | 2.6634 (15) | 175 (2) |
| O5—H5···O6xi | 0.82 (2) | 1.81 (2) | 2.6272 (14) | 177 (3) |
Symmetry codes: (i) −x+1, −y+1, −z+1; (viii) x, −y+1/2, z−1/2; (ix) −x, −y+1, −z+1; (x) x, −y+1/2, z+1/2; (xi) −x, −y+1, −z.
Footnotes
Supplementary data and figures for this paper are available from the IUCr electronic archives (Reference: WM2520).
References
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Associated Data
This section collects any data citations, data availability statements, or supplementary materials included in this article.
Supplementary Materials
Crystal structure: contains datablock(s) global, I. DOI: 10.1107/S1600536811038530/wm2520sup1.cif
Structure factors: contains datablock(s) I. DOI: 10.1107/S1600536811038530/wm2520Isup2.hkl
Additional supplementary materials: crystallographic information; 3D view; checkCIF report



