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. 1984 Dec 11;12(23):9123–9135. doi: 10.1093/nar/12.23.9123

Synthesis and reactions of a nucleoside derivative of phosphoric sulfonic anhydride. Studies related to the mechanisms of coupling reactions in the chemical synthesis of oligodeoxyribonucleotides by phosphotriester procedures.

W Dabkowski, Z Skrzypczynski, J Michalski, N Piel, L W McLaughlin, F Cramer
PMCID: PMC320442  PMID: 6549065

Abstract

The synthesis of a model compound, diphenylphosphoric toluene-p-sulfonic anhydride, an arylsubstituted phosphoric sulfonic mixed anhydride, is described. Using the same procedure a thymidyl substituted derivative was prepared. The phosphoric sulfonic anhydride is the presumed intermediate in oligonucleotide coupling reactions involving phosphodiester activation by arenesulfonyl derivatives. This mixed anhydride reacts with a variety of nucleophiles. It can be converted to phophotriester derivatives in the presence of simple alcohols. Phosphotriester formation using the 5'-hydroxyl of a thymidine derivative requires additionally a catalyst such as N-methylimidazole. The reactive intermediate produced upon the addition of N-methylimidazole to the phosphoric sulfonic anhydride has been observed spectroscopically using 31P-NMR.

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Selected References

These references are in PubMed. This may not be the complete list of references from this article.

  1. Efimov V. A., Reverdatto S. V., Chakhmakhcheva O. G. New effective method for the synthesis of oligonucleotides via phosphotriester intermediates. Nucleic Acids Res. 1982 Nov 11;10(21):6675–6694. doi: 10.1093/nar/10.21.6675. [DOI] [PMC free article] [PubMed] [Google Scholar]
  2. Lebedev A. V., Rezvukhin A. I. Tendencies of 31P chemical shifts changes in NMR spectra of nucleotide derivatives. Nucleic Acids Res. 1984 Jul 25;12(14):5547–5566. doi: 10.1093/nar/12.14.5547. [DOI] [PMC free article] [PubMed] [Google Scholar]
  3. Seth A. K., Jay E. A study of the efficiency and the problem of sulfonation of several condensing reagents and their mechanisms for the chemical synthesis of deoxyoligoribonucleotides. Nucleic Acids Res. 1980 Nov 25;8(22):5445–5459. doi: 10.1093/nar/8.22.5445. [DOI] [PMC free article] [PubMed] [Google Scholar]
  4. Stawinski J., Hozumi T., Narang S. A., Bahl C. P., Wu R. Arylsulfonyltetrazoles, new coupling reagents and further improvements in the triester method for the synthesis of deoxyribooligonucleotides. Nucleic Acids Res. 1977 Feb;4(2):353–371. doi: 10.1093/nar/4.2.353. [DOI] [PMC free article] [PubMed] [Google Scholar]
  5. Todd S. A. SOME ASPECTS OF PHOSPHATE CHEMISTRY. Proc Natl Acad Sci U S A. 1959 Sep;45(9):1389–1397. doi: 10.1073/pnas.45.9.1389. [DOI] [PMC free article] [PubMed] [Google Scholar]
  6. Zarytova V. F., Knorre D. G. General scheme of the phosphotriester condensation in the oligodeoxyribonucleotide synthesis with arylsulfonyl chlorides and arylsulfonyl azolides. Nucleic Acids Res. 1984 Feb 24;12(4):2091–2110. doi: 10.1093/nar/12.4.2091. [DOI] [PMC free article] [PubMed] [Google Scholar]

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