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. Author manuscript; available in PMC: 2012 Nov 15.
Published in final edited form as: Biochemistry. 2011 Oct 14;50(45):9694–9707. doi: 10.1021/bi201276r

Table 1.

kcatand kcat/Kmvalues determined for the various reactions catalyzed by wild-type RePC a

Variable Substrateb kcat
(min−1)
Km
(mM)
kcat/Km
(min−1 mM−1)
% kcat
of pyruvate
carboxylation
Pyruvate carboxylation MgATPc 396 ± 10d 0.145 ± 0.009 2670 ± 120 (100)
HCO3 700 ± 20 10.8 ± 0.4 64.8 ± 0.9 ---
pyruvate 440 ± 8d 0.15 ± 0.01 2900 ± 150 ---
Full reverse reaction MgADP 0.835 ± 0.005 0.12 ± 0.02 6.95 ± 0.002 0.2
Oxamate-induced decarboxylation of oxaloacetate NDe 9.03 ± 0.04f --- ---- 2.0
HCO3- dependent ATPase MgATP 2.58 ± 0.09 0.022 ± 0.003 115 ± 2 0.6
ADP phosphorylation Carbamoyl phosphate 2.41 ± 0.01 2.6 ± 0.5 0.93 ± 0.02 0.6
Acetyl phosphate 0.56 ± 0.02 0.34 ± 0.02 1.70 ± 0.05 0.1
a

Kinetic parameters were determined from data fits to eqn (1).

b

Varied substrate indicated, all other substrates were held constant at saturating concentrations. Reaction conditions: 50 mM Bis-tris, 25 mM Tricine, 25 mM Glycine (pH 7.5), 25° C, 0.25 mM acetyl-CoA. For more detailed reaction conditions see Methods section.

c

kcat (min−1) and kcat/Km (min−1 mM−1) were determined from fits of the initial rates of pyruvate carboxylation at varying concentrations of MgATP and fixed Mg2+ to the equation for an equilibrium ordered pattern (eqn (2)) and the Kia Mg2+ = 1.2 ± 0.2 mM . All other kcat and kcat/Km values were determined from fits to the eqn (1).

d

Apparent kcat.

e

ND = not determined.

f

Specific activity, determined in triplicate with saturating concentrations of all substrates and activators.