Abstract
In the title compound, C22H19FN2OS, the 2-fluorobenzoyl group adopts a trans conformation with respect to the thiono S atom across the N—C bond. In the crystal, intermolecular N—H⋯S, C—H⋯S and C—H⋯O hydrogen bonds link the molecules, forming a two-dimensional network parallel to (101).
Related literature
For standard bond lengths, see: Allen et al. (1987 ▶). For related structures, see: Nasir et al. (2011 ▶); Yamin & Hassan (2004 ▶); Hassan et al. (2008a
▶,b
▶,c
▶, 2009 ▶). For the synthesis, see: Hassan et al. (2008a
▶).
Experimental
Crystal data
C22H19FN2OS
M r = 378.45
Monoclinic,
a = 10.683 (3) Å
b = 7.026 (2) Å
c = 26.435 (7) Å
β = 101.100 (6)°
V = 1946.9 (10) Å3
Z = 4
Mo Kα radiation
μ = 0.19 mm−1
T = 298 K
0.42 × 0.21 × 0.18 mm
Data collection
Bruker SMART APEX CCD area-detector diffractometer
Absorption correction: multi-scan (SADABS; Sheldrick, 2000 ▶) T min = 0.925, T max = 0.967
8644 measured reflections
3425 independent reflections
2659 reflections with I > 2σ(I)
R int = 0.027
Refinement
R[F 2 > 2σ(F 2)] = 0.059
wR(F 2) = 0.138
S = 1.15
3425 reflections
244 parameters
H-atom parameters constrained
Δρmax = 0.25 e Å−3
Δρmin = −0.23 e Å−3
Data collection: SMART (Bruker, 2000 ▶); cell refinement: SAINT (Bruker, 2000 ▶); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: ORTEPIII (Burnett & Johnson, 1996 ▶), XP in SHELXTL (Sheldrick, 2008 ▶) and PLATON (Spek, 2009 ▶); software used to prepare material for publication: SHELXTL and PLATON.
Supplementary Material
Crystal structure: contains datablock(s) global, I. DOI: 10.1107/S1600536811026687/dn2702sup1.cif
Structure factors: contains datablock(s) I. DOI: 10.1107/S1600536811026687/dn2702Isup2.hkl
Supplementary material file. DOI: 10.1107/S1600536811026687/dn2702Isup3.cml
Additional supplementary materials: crystallographic information; 3D view; checkCIF report
Table 1. Hydrogen-bond geometry (Å, °).
D—H⋯A | D—H | H⋯A | D⋯A | D—H⋯A |
---|---|---|---|---|
N1—H1⋯S1i | 0.86 | 2.61 | 3.422 (2) | 159 |
C1—H1A⋯S1i | 0.93 | 2.87 | 3.727 (3) | 154 |
C4—H4⋯O1ii | 0.93 | 2.50 | 3.322 (4) | 147 |
Symmetry codes: (i) ; (ii)
.
Acknowledgments
The authors thank Universiti Kebangsaan Malaysia for providing facilities and grants (postdoctoral for INH, UKM-GUP-BTT-07–30-190 and UKM-OUP-TK-16– 73/2010&2011 for MBK sabbatical leave). They also expresstheir appreciation to the Kementerian Pengajian Tinggi, Malaysia, for the research fund No. UKM-ST-06-FRGS0111–2009.
supplementary crystallographic information
Comment
The title compound, I, is a thiourea derivative of dibenzylamine analogous to our previous reported, 1,1-sibenzyl-3-(3-chlorobenzoyl)thiourea, II (Nasir et al. 2011). The molecule maintains the the same trans and cis conformation for both the 3-fluorobenzoyl and the dibenzylamine groups, respectively, relative to the S atom across the N2—C8 bond (Fig 1). The dihedral angle between the phenyl ring, (C1—C6), and the thiourea fragment, (S1/N1/N2/C8) is 70.95 (13)° , whereas in II was 72.9 (2)°. The bond lengths and angles in the molecules are in normal ranges (Allen et al., 1987) and comparable with those of II. However, the C=S bond length [1.678 (2)Å] is slightly longer than that of (II) [1.672 (6)Å]
Both phenyl rings, [C10/C11/C12/C13/C14/C15] and [C17/C18/C19/C20/C21/C22] are essentially planar and are twisted to each other by a dihedral angle of 22.4 (4)°. The intermolecular N1—H1···S1, C1—H1A···S and C4—H4···O1 hydrogen bonds (Table 1,) links the molecules into two dimensional ribbon parallel to the (1 0 1) plane (Fig 2).
Experimental
The title compound was synthesized according to a previously reported compound (Hassan et al., 2008a). A colourless crystal, suitable for X-ray crystallography, was obtained by a slow evaporation from ethanolic solution at room temperature (yield 87%).
Refinement
H atoms of C and N atoms were positioned geometrically and allowed to ride on their parent atoms, with Uiso= 1.2Ueq (C) for aromatic 0.93 Å, Uiso = 1.2Ueq (C) for CH2 0.97 Å, Uiso = 1.2Ueq (N) for N—H 0.86 Å.
Figures
Fig. 1.
The molecular structure of (I), with the atoms labeling scheme and displacement ellipsoids are drawn at the 50% probability level. H atoms are represented as small spheres of arbitrary radii.
Fig. 2.
Partial packing of (I) view down the b axis. H bonds are shown as dashed lines. H atoms not involved in hydrogen bondings have been omitted for clarity.
Crystal data
C22H19FN2OS | F(000) = 792 |
Mr = 378.45 | Dx = 1.291 Mg m−3 |
Monoclinic, P21/n | Melting point: 410 K |
Hall symbol: -P 2yn | Mo Kα radiation, λ = 0.71073 Å |
a = 10.683 (3) Å | Cell parameters from 2659 reflections |
b = 7.026 (2) Å | θ = 2.0–25.0° |
c = 26.435 (7) Å | µ = 0.19 mm−1 |
β = 101.100 (6)° | T = 298 K |
V = 1946.9 (10) Å3 | Block, colourless |
Z = 4 | 0.42 × 0.21 × 0.18 mm |
Data collection
Bruker SMART APEX CCD area-detector diffractometer | 3425 independent reflections |
Radiation source: fine-focus sealed tube | 2659 reflections with I > 2σ(I) |
graphite | Rint = 0.027 |
ω scans | θmax = 25.0°, θmin = 2.0° |
Absorption correction: multi-scan (SADABS; Sheldrick, 2000) | h = −12→8 |
Tmin = 0.925, Tmax = 0.967 | k = −8→8 |
8644 measured reflections | l = −31→28 |
Refinement
Refinement on F2 | Primary atom site location: structure-invariant direct methods |
Least-squares matrix: full | Secondary atom site location: difference Fourier map |
R[F2 > 2σ(F2)] = 0.059 | Hydrogen site location: inferred from neighbouring sites |
wR(F2) = 0.138 | H-atom parameters constrained |
S = 1.15 | w = 1/[σ2(Fo2) + (0.0542P)2 + 0.5146P] where P = (Fo2 + 2Fc2)/3 |
3425 reflections | (Δ/σ)max < 0.001 |
244 parameters | Δρmax = 0.25 e Å−3 |
0 restraints | Δρmin = −0.23 e Å−3 |
Special details
Geometry. All esds (except the esd in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell esds are taken into account individually in the estimation of esds in distances, angles and torsion angles; correlations between esds in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell esds is used for estimating esds involving l.s. planes. |
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > 2sigma(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger. |
Fractional atomic coordinates and isotropic or equivalent isotropic displacement parameters (Å2)
x | y | z | Uiso*/Ueq | ||
F1 | 0.8992 (2) | −0.7024 (3) | 0.17795 (9) | 0.1137 (8) | |
S1 | 0.47635 (8) | 0.26603 (10) | 0.02677 (3) | 0.0641 (3) | |
O1 | 0.5719 (2) | 0.0400 (3) | 0.17142 (7) | 0.0736 (6) | |
N1 | 0.5164 (2) | −0.0377 (3) | 0.08698 (7) | 0.0502 (6) | |
H1 | 0.5210 | −0.1222 | 0.0639 | 0.060* | |
N2 | 0.3452 (2) | 0.1514 (3) | 0.09743 (7) | 0.0453 (5) | |
C1 | 0.6626 (3) | −0.3835 (4) | 0.11002 (10) | 0.0570 (7) | |
H1A | 0.6047 | −0.3773 | 0.0789 | 0.068* | |
C2 | 0.7407 (3) | −0.5402 (5) | 0.12067 (12) | 0.0697 (8) | |
H2 | 0.7369 | −0.6391 | 0.0970 | 0.084* | |
C3 | 0.8236 (3) | −0.5463 (5) | 0.16670 (13) | 0.0742 (9) | |
C4 | 0.8339 (3) | −0.4041 (6) | 0.20216 (12) | 0.0807 (10) | |
H4 | 0.8924 | −0.4120 | 0.2331 | 0.097* | |
C5 | 0.7554 (3) | −0.2481 (5) | 0.19116 (10) | 0.0694 (9) | |
H5 | 0.7605 | −0.1501 | 0.2151 | 0.083* | |
C6 | 0.6688 (2) | −0.2352 (4) | 0.14481 (9) | 0.0495 (6) | |
C7 | 0.5840 (2) | −0.0665 (4) | 0.13658 (9) | 0.0507 (7) | |
C8 | 0.4407 (3) | 0.1238 (3) | 0.07298 (8) | 0.0460 (6) | |
C9 | 0.2742 (3) | 0.3312 (4) | 0.09357 (10) | 0.0532 (7) | |
H9A | 0.1842 | 0.3052 | 0.0815 | 0.064* | |
H9B | 0.3027 | 0.4123 | 0.0683 | 0.064* | |
C10 | 0.2914 (3) | 0.4349 (3) | 0.14432 (9) | 0.0482 (6) | |
C11 | 0.4099 (3) | 0.4550 (4) | 0.17540 (11) | 0.0627 (8) | |
H11 | 0.4801 | 0.3968 | 0.1659 | 0.075* | |
C12 | 0.4261 (4) | 0.5594 (5) | 0.22019 (12) | 0.0768 (10) | |
H12 | 0.5069 | 0.5718 | 0.2406 | 0.092* | |
C13 | 0.3240 (4) | 0.6450 (4) | 0.23477 (12) | 0.0796 (10) | |
H13 | 0.3351 | 0.7164 | 0.2649 | 0.096* | |
C14 | 0.2052 (4) | 0.6251 (4) | 0.20481 (13) | 0.0776 (10) | |
H14 | 0.1352 | 0.6823 | 0.2148 | 0.093* | |
C15 | 0.1887 (3) | 0.5196 (4) | 0.15949 (11) | 0.0625 (8) | |
H15 | 0.1076 | 0.5062 | 0.1393 | 0.075* | |
C16 | 0.2919 (3) | 0.0015 (4) | 0.12613 (9) | 0.0506 (7) | |
H16A | 0.2790 | 0.0517 | 0.1589 | 0.061* | |
H16B | 0.3517 | −0.1036 | 0.1330 | 0.061* | |
C17 | 0.1667 (3) | −0.0689 (4) | 0.09543 (9) | 0.0521 (7) | |
C18 | 0.0539 (3) | −0.0329 (5) | 0.11120 (12) | 0.0716 (9) | |
H18 | 0.0539 | 0.0402 | 0.1405 | 0.086* | |
C19 | −0.0598 (3) | −0.1044 (7) | 0.08383 (17) | 0.0976 (12) | |
H19 | −0.1357 | −0.0802 | 0.0950 | 0.117* | |
C20 | −0.0607 (5) | −0.2105 (7) | 0.04053 (17) | 0.1034 (14) | |
H20 | −0.1371 | −0.2595 | 0.0224 | 0.124* | |
C21 | 0.0496 (5) | −0.2446 (5) | 0.02384 (13) | 0.0921 (12) | |
H21 | 0.0482 | −0.3150 | −0.0060 | 0.111* | |
C22 | 0.1643 (3) | −0.1750 (4) | 0.05112 (11) | 0.0680 (8) | |
H22 | 0.2398 | −0.1996 | 0.0397 | 0.082* |
Atomic displacement parameters (Å2)
U11 | U22 | U33 | U12 | U13 | U23 | |
F1 | 0.1048 (16) | 0.1189 (18) | 0.1105 (16) | 0.0546 (14) | 0.0040 (13) | 0.0346 (14) |
S1 | 0.1037 (6) | 0.0484 (4) | 0.0428 (4) | −0.0095 (4) | 0.0210 (4) | 0.0047 (3) |
O1 | 0.0912 (15) | 0.0817 (15) | 0.0405 (10) | 0.0164 (12) | −0.0058 (10) | −0.0154 (10) |
N1 | 0.0710 (14) | 0.0460 (12) | 0.0316 (10) | 0.0060 (11) | 0.0050 (10) | −0.0024 (9) |
N2 | 0.0605 (13) | 0.0358 (11) | 0.0379 (11) | 0.0003 (10) | 0.0055 (10) | 0.0029 (8) |
C1 | 0.0627 (18) | 0.0552 (17) | 0.0482 (15) | 0.0041 (15) | −0.0013 (13) | 0.0088 (13) |
C2 | 0.075 (2) | 0.063 (2) | 0.0670 (19) | 0.0095 (17) | 0.0033 (16) | 0.0058 (15) |
C3 | 0.064 (2) | 0.087 (2) | 0.072 (2) | 0.0230 (18) | 0.0127 (17) | 0.0279 (19) |
C4 | 0.064 (2) | 0.121 (3) | 0.0510 (18) | 0.020 (2) | −0.0025 (15) | 0.020 (2) |
C5 | 0.0630 (18) | 0.099 (3) | 0.0424 (15) | 0.0080 (19) | 0.0008 (14) | 0.0019 (15) |
C6 | 0.0500 (15) | 0.0624 (17) | 0.0360 (13) | −0.0023 (14) | 0.0080 (11) | 0.0092 (12) |
C7 | 0.0567 (16) | 0.0580 (17) | 0.0350 (13) | −0.0042 (14) | 0.0027 (12) | −0.0001 (12) |
C8 | 0.0644 (17) | 0.0389 (14) | 0.0309 (12) | −0.0067 (13) | −0.0007 (12) | −0.0060 (10) |
C9 | 0.0685 (18) | 0.0413 (15) | 0.0468 (14) | 0.0062 (14) | 0.0038 (13) | 0.0037 (11) |
C10 | 0.0657 (17) | 0.0346 (13) | 0.0452 (14) | −0.0024 (13) | 0.0125 (13) | 0.0041 (11) |
C11 | 0.072 (2) | 0.0539 (18) | 0.0614 (17) | −0.0025 (15) | 0.0122 (15) | −0.0097 (14) |
C12 | 0.101 (3) | 0.065 (2) | 0.0594 (19) | −0.012 (2) | 0.0029 (18) | −0.0140 (16) |
C13 | 0.143 (3) | 0.0475 (19) | 0.0521 (18) | −0.005 (2) | 0.029 (2) | −0.0051 (14) |
C14 | 0.118 (3) | 0.0539 (19) | 0.074 (2) | 0.018 (2) | 0.051 (2) | 0.0056 (16) |
C15 | 0.076 (2) | 0.0505 (17) | 0.0659 (18) | 0.0077 (16) | 0.0252 (16) | 0.0086 (14) |
C16 | 0.0652 (17) | 0.0459 (15) | 0.0415 (13) | 0.0018 (13) | 0.0126 (12) | 0.0053 (11) |
C17 | 0.0682 (18) | 0.0428 (15) | 0.0455 (14) | −0.0060 (14) | 0.0114 (13) | 0.0071 (12) |
C18 | 0.074 (2) | 0.078 (2) | 0.0655 (19) | −0.0069 (18) | 0.0196 (17) | 0.0071 (16) |
C19 | 0.067 (2) | 0.127 (4) | 0.098 (3) | −0.021 (2) | 0.014 (2) | 0.022 (3) |
C20 | 0.100 (3) | 0.116 (3) | 0.083 (3) | −0.051 (3) | −0.011 (2) | 0.022 (2) |
C21 | 0.135 (4) | 0.074 (2) | 0.060 (2) | −0.038 (3) | 0.001 (2) | −0.0021 (17) |
C22 | 0.092 (2) | 0.0541 (17) | 0.0564 (17) | −0.0092 (17) | 0.0109 (16) | −0.0003 (14) |
Geometric parameters (Å, °)
F1—C3 | 1.360 (4) | C10—C11 | 1.376 (4) |
S1—C8 | 1.678 (3) | C11—C12 | 1.375 (4) |
O1—C7 | 1.213 (3) | C11—H11 | 0.9300 |
N1—C7 | 1.385 (3) | C12—C13 | 1.365 (5) |
N1—C8 | 1.401 (3) | C12—H12 | 0.9300 |
N1—H1 | 0.8600 | C13—C14 | 1.367 (5) |
N2—C8 | 1.323 (3) | C13—H13 | 0.9300 |
N2—C9 | 1.467 (3) | C14—C15 | 1.391 (4) |
N2—C16 | 1.475 (3) | C14—H14 | 0.9300 |
C1—C2 | 1.378 (4) | C15—H15 | 0.9300 |
C1—C6 | 1.383 (4) | C16—C17 | 1.508 (4) |
C1—H1A | 0.9300 | C16—H16A | 0.9700 |
C2—C3 | 1.361 (4) | C16—H16B | 0.9700 |
C2—H2 | 0.9300 | C17—C18 | 1.372 (4) |
C3—C4 | 1.360 (5) | C17—C22 | 1.385 (4) |
C4—C5 | 1.376 (4) | C18—C19 | 1.383 (5) |
C4—H4 | 0.9300 | C18—H18 | 0.9300 |
C5—C6 | 1.389 (4) | C19—C20 | 1.364 (6) |
C5—H5 | 0.9300 | C19—H19 | 0.9300 |
C6—C7 | 1.482 (4) | C20—C21 | 1.356 (6) |
C9—C10 | 1.507 (3) | C20—H20 | 0.9300 |
C9—H9A | 0.9700 | C21—C22 | 1.386 (5) |
C9—H9B | 0.9700 | C21—H21 | 0.9300 |
C10—C15 | 1.375 (4) | C22—H22 | 0.9300 |
C7—N1—C8 | 122.6 (2) | C12—C11—C10 | 121.2 (3) |
C7—N1—H1 | 118.7 | C12—C11—H11 | 119.4 |
C8—N1—H1 | 118.7 | C10—C11—H11 | 119.4 |
C8—N2—C9 | 122.0 (2) | C13—C12—C11 | 120.2 (3) |
C8—N2—C16 | 123.8 (2) | C13—C12—H12 | 119.9 |
C9—N2—C16 | 113.9 (2) | C11—C12—H12 | 119.9 |
C2—C1—C6 | 121.1 (3) | C12—C13—C14 | 119.6 (3) |
C2—C1—H1A | 119.4 | C12—C13—H13 | 120.2 |
C6—C1—H1A | 119.4 | C14—C13—H13 | 120.2 |
C3—C2—C1 | 118.2 (3) | C13—C14—C15 | 120.2 (3) |
C3—C2—H2 | 120.9 | C13—C14—H14 | 119.9 |
C1—C2—H2 | 120.9 | C15—C14—H14 | 119.9 |
C4—C3—F1 | 118.4 (3) | C10—C15—C14 | 120.4 (3) |
C4—C3—C2 | 123.0 (3) | C10—C15—H15 | 119.8 |
F1—C3—C2 | 118.5 (3) | C14—C15—H15 | 119.8 |
C3—C4—C5 | 118.3 (3) | N2—C16—C17 | 110.32 (19) |
C3—C4—H4 | 120.8 | N2—C16—H16A | 109.6 |
C5—C4—H4 | 120.8 | C17—C16—H16A | 109.6 |
C4—C5—C6 | 120.9 (3) | N2—C16—H16B | 109.6 |
C4—C5—H5 | 119.5 | C17—C16—H16B | 109.6 |
C6—C5—H5 | 119.5 | H16A—C16—H16B | 108.1 |
C1—C6—C5 | 118.4 (3) | C18—C17—C22 | 118.8 (3) |
C1—C6—C7 | 123.7 (2) | C18—C17—C16 | 121.1 (3) |
C5—C6—C7 | 117.8 (3) | C22—C17—C16 | 120.1 (3) |
O1—C7—N1 | 121.1 (2) | C17—C18—C19 | 120.5 (3) |
O1—C7—C6 | 122.2 (2) | C17—C18—H18 | 119.7 |
N1—C7—C6 | 116.7 (2) | C19—C18—H18 | 119.7 |
N2—C8—N1 | 116.7 (2) | C20—C19—C18 | 120.1 (4) |
N2—C8—S1 | 124.9 (2) | C20—C19—H19 | 120.0 |
N1—C8—S1 | 118.3 (2) | C18—C19—H19 | 120.0 |
N2—C9—C10 | 112.4 (2) | C21—C20—C19 | 120.2 (4) |
N2—C9—H9A | 109.1 | C21—C20—H20 | 119.9 |
C10—C9—H9A | 109.1 | C19—C20—H20 | 119.9 |
N2—C9—H9B | 109.1 | C20—C21—C22 | 120.3 (4) |
C10—C9—H9B | 109.1 | C20—C21—H21 | 119.8 |
H9A—C9—H9B | 107.8 | C22—C21—H21 | 119.8 |
C15—C10—C11 | 118.4 (3) | C17—C22—C21 | 120.0 (3) |
C15—C10—C9 | 120.1 (3) | C17—C22—H22 | 120.0 |
C11—C10—C9 | 121.5 (3) | C21—C22—H22 | 120.0 |
Hydrogen-bond geometry (Å, °)
D—H···A | D—H | H···A | D···A | D—H···A |
C9—H9B···S1 | 0.97 | 2.55 | 3.076 (3) | 114 |
N1—H1···S1i | 0.86 | 2.61 | 3.422 (2) | 159 |
C1—H1A···S1i | 0.93 | 2.87 | 3.727 (3) | 154 |
C4—H4···O1ii | 0.93 | 2.50 | 3.322 (4) | 147 |
Symmetry codes: (i) −x+1, −y, −z; (ii) −x+3/2, y−1/2, −z+1/2.
Footnotes
Supplementary data and figures for this paper are available from the IUCr electronic archives (Reference: DN2702).
References
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Associated Data
This section collects any data citations, data availability statements, or supplementary materials included in this article.
Supplementary Materials
Crystal structure: contains datablock(s) global, I. DOI: 10.1107/S1600536811026687/dn2702sup1.cif
Structure factors: contains datablock(s) I. DOI: 10.1107/S1600536811026687/dn2702Isup2.hkl
Supplementary material file. DOI: 10.1107/S1600536811026687/dn2702Isup3.cml
Additional supplementary materials: crystallographic information; 3D view; checkCIF report