Abstract
The title molecule, C12H16N2O5, adopts a trans configuration with respect to the C=N bond. In the crystal, intermolecular N—H⋯O hydrogen bonds link the molecules into chains in [001], and weak intermolecular C—H⋯O interactions further link the chains into corrugated layers parallel to the bc plane.
Related literature
For applications of benzaldehydehydrazone derivatives, see: Parashar et al. (1988 ▶); Hadjoudis et al. (1987 ▶); Borg et al. (1999 ▶). For a related structure, see: Shang et al. (2007 ▶).
Experimental
Crystal data
C12H16N2O5
M r = 268.27
Monoclinic,
a = 9.9897 (15) Å
b = 17.606 (3) Å
c = 8.0801 (12) Å
β = 111.806 (4)°
V = 1319.4 (3) Å3
Z = 4
Mo Kα radiation
μ = 0.11 mm−1
T = 223 K
0.18 × 0.15 × 0.12 mm
Data collection
Bruker SMART CCD area-detector diffractometer
Absorption correction: multi-scan (SADABS; Bruker, 2002 ▶) T min = 0.971, T max = 0.979
9747 measured reflections
2318 independent reflections
1836 reflections with I > 2σ(I)
R int = 0.039
Refinement
R[F 2 > 2σ(F 2)] = 0.040
wR(F 2) = 0.112
S = 1.10
2318 reflections
173 parameters
H-atom parameters constrained
Δρmax = 0.19 e Å−3
Δρmin = −0.19 e Å−3
Data collection: SMART (Bruker, 2002 ▶); cell refinement: SAINT (Bruker, 2002 ▶); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: SHELXTL (Sheldrick, 2008 ▶); software used to prepare material for publication: SHELXTL.
Supplementary Material
Crystal structure: contains datablock(s) I, global. DOI: 10.1107/S1600536811026705/cv5126sup1.cif
Structure factors: contains datablock(s) I. DOI: 10.1107/S1600536811026705/cv5126Isup2.hkl
Supplementary material file. DOI: 10.1107/S1600536811026705/cv5126Isup3.cml
Additional supplementary materials: crystallographic information; 3D view; checkCIF report
Table 1. Hydrogen-bond geometry (Å, °).
| D—H⋯A | D—H | H⋯A | D⋯A | D—H⋯A |
|---|---|---|---|---|
| N2—H2⋯O4i | 0.86 | 2.09 | 2.8403 (18) | 146 |
| C8—H8A⋯O3ii | 0.96 | 2.56 | 3.423 (2) | 150 |
Symmetry codes: (i)
; (ii)
.
Acknowledgments
The authors thank Hangzhou Vocational and Technical College, China, for financial support.
supplementary crystallographic information
Comment
Benzaldehydehydrazone derivatives have received considerable attentions due to their pharmacological activity (Parashar et al., 1988) and photochromic properties (Hadjoudis et al., 1987). They also serve as intermidiates of 1,3,4-oxadiazoles, which have been reported to be versatile compounds with many properties (Borg et al., 1999). As a further investigation of this type of compounds, we report herein the crystal structure of the title compound (I).
The title compound (Fig.1) adopts a trans configuration with respect to the C═N bond. The hydrazine carboxylic acid methyl ester group is slightly twisted away from the attached ring. The dihedral angle between the benzene ring and the C10/C11/C12//N1/N2/O4/O5 plane is 14.23 (5)°. The bond lengths and angles agree with those observed for (E)-methyl N'-(4-hydroxybenzylidene)hydrazinecarboxylate (Shang et al., 2007).
In the crystal structure, intermolecular N—H···O hydrogen bonds (Table 1) link molecules into chains in [001], and weak intermolecular C—H···O interactions (Table 1) link further these chains into corrugated layers parallel to bc plane.
Experimental
2,4,5-Trimethoxybenzaldehyde (1.96g, 0.01mol) and methyl hydrazinecarboxylate (0.9g, 0.01mol) were dissolved in stirred methanol (20ml) and left for 5.2h at room temperature. The resulting solid was filtered off and recrystallized from ethanol to give the title compound in 91% yield. Crystals suitable for X-ray analysis were obtained by slow evaporation of a ethanol solution at room temperature (m.p. 432-435 K).
Refinement
H atoms were geometrically positioned (C—H 0.93 - 0.96 Å; N—H 0.86 Å), and refined using a riding model, with Uiso(H) = 1.2-1.5 Ueq(C, N).
Figures
Fig. 1.
Molecular structure of (I), showing 40% probability displacement ellipsoids and the atomic numbering.
Crystal data
| C12H16N2O5 | F(000) = 568 |
| Mr = 268.27 | Dx = 1.350 Mg m−3 |
| Monoclinic, P21/c | Mo Kα radiation, λ = 0.71073 Å |
| Hall symbol: -P 2ybc | Cell parameters from 2318 reflections |
| a = 9.9897 (15) Å | θ = 2.2–25.0° |
| b = 17.606 (3) Å | µ = 0.11 mm−1 |
| c = 8.0801 (12) Å | T = 223 K |
| β = 111.806 (4)° | Block, colourless |
| V = 1319.4 (3) Å3 | 0.18 × 0.15 × 0.12 mm |
| Z = 4 |
Data collection
| Bruker SMART CCD area-detector diffractometer | 2318 independent reflections |
| Radiation source: fine-focus sealed tube | 1836 reflections with I > 2σ(I) |
| graphite | Rint = 0.039 |
| φ and ω scans | θmax = 25.0°, θmin = 2.2° |
| Absorption correction: multi-scan (SADABS; Bruker, 2002) | h = −11→11 |
| Tmin = 0.971, Tmax = 0.979 | k = −20→20 |
| 9747 measured reflections | l = −9→9 |
Refinement
| Refinement on F2 | Secondary atom site location: difference Fourier map |
| Least-squares matrix: full | Hydrogen site location: inferred from neighbouring sites |
| R[F2 > 2σ(F2)] = 0.040 | H-atom parameters constrained |
| wR(F2) = 0.112 | w = 1/[σ2(Fo2) + (0.0529P)2 + 0.1933P] where P = (Fo2 + 2Fc2)/3 |
| S = 1.10 | (Δ/σ)max < 0.001 |
| 2318 reflections | Δρmax = 0.19 e Å−3 |
| 173 parameters | Δρmin = −0.19 e Å−3 |
| 0 restraints | Extinction correction: SHELXL97 (Sheldrick, 2008), Fc*=kFc[1+0.001xFc2λ3/sin(2θ)]-1/4 |
| Primary atom site location: structure-invariant direct methods | Extinction coefficient: 0.014 (2) |
Special details
| Geometry. All esds (except the esd in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell esds are taken into account individually in the estimation of esds in distances, angles and torsion angles; correlations between esds in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell esds is used for estimating esds involving l.s. planes. |
| Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > 2sigma(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger. |
Fractional atomic coordinates and isotropic or equivalent isotropic displacement parameters (Å2)
| x | y | z | Uiso*/Ueq | ||
| C1 | 0.0907 (2) | −0.07569 (10) | 0.1659 (3) | 0.0495 (5) | |
| H1A | 0.0345 | −0.0999 | 0.0554 | 0.074* | |
| H1B | 0.0279 | −0.0567 | 0.2218 | 0.074* | |
| H1C | 0.1565 | −0.1118 | 0.2432 | 0.074* | |
| C4 | 0.25538 (17) | 0.02726 (9) | 0.2728 (2) | 0.0379 (4) | |
| C5 | 0.31441 (18) | 0.09331 (9) | 0.2291 (2) | 0.0393 (4) | |
| C9 | 0.3154 (3) | 0.17706 (12) | −0.0014 (3) | 0.0740 (7) | |
| H9A | 0.2793 | 0.1803 | −0.1291 | 0.111* | |
| H9B | 0.4188 | 0.1796 | 0.0445 | 0.111* | |
| H9C | 0.2780 | 0.2185 | 0.0455 | 0.111* | |
| C6 | 0.40772 (18) | 0.13694 (9) | 0.3631 (2) | 0.0375 (4) | |
| H6 | 0.4482 | 0.1800 | 0.3339 | 0.045* | |
| C3 | 0.28653 (17) | 0.00903 (9) | 0.4492 (2) | 0.0374 (4) | |
| H3 | 0.2450 | −0.0338 | 0.4779 | 0.045* | |
| C2 | 0.37954 (17) | 0.05417 (9) | 0.5844 (2) | 0.0366 (4) | |
| C8 | 0.3448 (2) | −0.02382 (11) | 0.8084 (3) | 0.0529 (5) | |
| H8A | 0.3788 | −0.0283 | 0.9358 | 0.079* | |
| H8B | 0.3666 | −0.0696 | 0.7588 | 0.079* | |
| H8C | 0.2424 | −0.0158 | 0.7618 | 0.079* | |
| C7 | 0.44350 (17) | 0.11824 (9) | 0.5432 (2) | 0.0349 (4) | |
| C10 | 0.54924 (18) | 0.16166 (9) | 0.6853 (2) | 0.0381 (4) | |
| H10 | 0.5663 | 0.1494 | 0.8034 | 0.046* | |
| C11 | 0.81188 (18) | 0.30059 (9) | 0.7763 (2) | 0.0360 (4) | |
| C12 | 1.0210 (2) | 0.37093 (12) | 0.9307 (3) | 0.0608 (6) | |
| H12A | 1.0813 | 0.3852 | 1.0498 | 0.091* | |
| H12B | 0.9823 | 0.4157 | 0.8618 | 0.091* | |
| H12C | 1.0771 | 0.3431 | 0.8769 | 0.091* | |
| N1 | 0.61921 (14) | 0.21635 (7) | 0.65137 (17) | 0.0357 (4) | |
| N2 | 0.71776 (15) | 0.25135 (8) | 0.79917 (17) | 0.0404 (4) | |
| H2 | 0.7189 | 0.2418 | 0.9040 | 0.049* | |
| O1 | 0.27162 (15) | 0.10777 (7) | 0.04985 (16) | 0.0559 (4) | |
| O2 | 0.16975 (13) | −0.01434 (7) | 0.13198 (16) | 0.0520 (4) | |
| O3 | 0.41409 (14) | 0.03895 (7) | 0.76186 (16) | 0.0501 (4) | |
| O4 | 0.81346 (14) | 0.32263 (7) | 0.63555 (16) | 0.0488 (4) | |
| O5 | 0.90455 (14) | 0.32388 (7) | 0.93597 (16) | 0.0530 (4) |
Atomic displacement parameters (Å2)
| U11 | U22 | U33 | U12 | U13 | U23 | |
| C1 | 0.0485 (11) | 0.0418 (10) | 0.0529 (11) | −0.0116 (8) | 0.0126 (9) | −0.0047 (8) |
| C4 | 0.0334 (9) | 0.0372 (9) | 0.0420 (10) | −0.0014 (7) | 0.0128 (8) | −0.0043 (7) |
| C5 | 0.0406 (10) | 0.0415 (9) | 0.0363 (10) | −0.0020 (8) | 0.0150 (8) | −0.0014 (7) |
| C9 | 0.1031 (19) | 0.0639 (14) | 0.0460 (12) | −0.0276 (13) | 0.0170 (12) | 0.0066 (10) |
| C6 | 0.0379 (9) | 0.0362 (9) | 0.0411 (10) | −0.0031 (7) | 0.0178 (8) | −0.0002 (7) |
| C3 | 0.0343 (9) | 0.0349 (9) | 0.0460 (11) | −0.0018 (7) | 0.0183 (8) | 0.0003 (7) |
| C2 | 0.0339 (9) | 0.0380 (9) | 0.0391 (10) | 0.0016 (7) | 0.0150 (7) | 0.0016 (7) |
| C8 | 0.0610 (13) | 0.0518 (11) | 0.0482 (11) | −0.0143 (9) | 0.0230 (10) | 0.0053 (9) |
| C7 | 0.0324 (8) | 0.0345 (9) | 0.0394 (10) | 0.0011 (7) | 0.0150 (7) | −0.0022 (7) |
| C10 | 0.0396 (9) | 0.0404 (9) | 0.0362 (9) | −0.0017 (8) | 0.0164 (8) | −0.0006 (7) |
| C11 | 0.0407 (9) | 0.0346 (9) | 0.0348 (10) | −0.0027 (7) | 0.0163 (8) | −0.0030 (7) |
| C12 | 0.0441 (11) | 0.0646 (13) | 0.0714 (15) | −0.0194 (10) | 0.0187 (10) | −0.0095 (11) |
| N1 | 0.0356 (7) | 0.0374 (7) | 0.0337 (8) | −0.0032 (6) | 0.0124 (6) | −0.0038 (6) |
| N2 | 0.0460 (8) | 0.0475 (8) | 0.0281 (8) | −0.0127 (7) | 0.0141 (7) | −0.0033 (6) |
| O1 | 0.0700 (9) | 0.0561 (8) | 0.0372 (7) | −0.0229 (7) | 0.0146 (6) | 0.0005 (6) |
| O2 | 0.0565 (8) | 0.0511 (8) | 0.0439 (7) | −0.0195 (6) | 0.0132 (6) | −0.0063 (6) |
| O3 | 0.0594 (8) | 0.0510 (8) | 0.0386 (7) | −0.0180 (6) | 0.0168 (6) | 0.0013 (5) |
| O4 | 0.0612 (8) | 0.0506 (7) | 0.0403 (8) | −0.0135 (6) | 0.0255 (6) | −0.0020 (6) |
| O5 | 0.0510 (8) | 0.0632 (8) | 0.0408 (7) | −0.0249 (6) | 0.0125 (6) | −0.0062 (6) |
Geometric parameters (Å, °)
| C1—O2 | 1.423 (2) | C2—C7 | 1.396 (2) |
| C1—H1A | 0.9600 | C8—O3 | 1.426 (2) |
| C1—H1B | 0.9600 | C8—H8A | 0.9600 |
| C1—H1C | 0.9600 | C8—H8B | 0.9600 |
| C4—O2 | 1.3562 (19) | C8—H8C | 0.9600 |
| C4—C3 | 1.379 (2) | C7—C10 | 1.455 (2) |
| C4—C5 | 1.407 (2) | C10—N1 | 1.278 (2) |
| C5—C6 | 1.372 (2) | C10—H10 | 0.9300 |
| C5—O1 | 1.3730 (19) | C11—O4 | 1.2072 (19) |
| C9—O1 | 1.409 (2) | C11—N2 | 1.341 (2) |
| C9—H9A | 0.9600 | C11—O5 | 1.343 (2) |
| C9—H9B | 0.9600 | C12—O5 | 1.442 (2) |
| C9—H9C | 0.9600 | C12—H12A | 0.9600 |
| C6—C7 | 1.403 (2) | C12—H12B | 0.9600 |
| C6—H6 | 0.9300 | C12—H12C | 0.9600 |
| C3—C2 | 1.391 (2) | N1—N2 | 1.3790 (18) |
| C3—H3 | 0.9300 | N2—H2 | 0.8600 |
| C2—O3 | 1.371 (2) | ||
| O2—C1—H1A | 109.5 | O3—C8—H8B | 109.5 |
| O2—C1—H1B | 109.5 | H8A—C8—H8B | 109.5 |
| H1A—C1—H1B | 109.5 | O3—C8—H8C | 109.5 |
| O2—C1—H1C | 109.5 | H8A—C8—H8C | 109.5 |
| H1A—C1—H1C | 109.5 | H8B—C8—H8C | 109.5 |
| H1B—C1—H1C | 109.5 | C2—C7—C6 | 118.29 (15) |
| O2—C4—C3 | 124.82 (15) | C2—C7—C10 | 119.92 (15) |
| O2—C4—C5 | 115.38 (15) | C6—C7—C10 | 121.72 (15) |
| C3—C4—C5 | 119.79 (15) | N1—C10—C7 | 121.40 (15) |
| C6—C5—O1 | 125.66 (15) | N1—C10—H10 | 119.3 |
| C6—C5—C4 | 119.35 (15) | C7—C10—H10 | 119.3 |
| O1—C5—C4 | 114.99 (14) | O4—C11—N2 | 126.36 (16) |
| O1—C9—H9A | 109.5 | O4—C11—O5 | 124.16 (15) |
| O1—C9—H9B | 109.5 | N2—C11—O5 | 109.47 (14) |
| H9A—C9—H9B | 109.5 | O5—C12—H12A | 109.5 |
| O1—C9—H9C | 109.5 | O5—C12—H12B | 109.5 |
| H9A—C9—H9C | 109.5 | H12A—C12—H12B | 109.5 |
| H9B—C9—H9C | 109.5 | O5—C12—H12C | 109.5 |
| C5—C6—C7 | 121.62 (15) | H12A—C12—H12C | 109.5 |
| C5—C6—H6 | 119.2 | H12B—C12—H12C | 109.5 |
| C7—C6—H6 | 119.2 | C10—N1—N2 | 114.97 (13) |
| C4—C3—C2 | 120.49 (15) | C11—N2—N1 | 118.74 (13) |
| C4—C3—H3 | 119.8 | C11—N2—H2 | 120.6 |
| C2—C3—H3 | 119.8 | N1—N2—H2 | 120.6 |
| O3—C2—C3 | 123.04 (14) | C5—O1—C9 | 117.49 (14) |
| O3—C2—C7 | 116.58 (14) | C4—O2—C1 | 118.08 (14) |
| C3—C2—C7 | 120.38 (15) | C2—O3—C8 | 117.95 (13) |
| O3—C8—H8A | 109.5 | C11—O5—C12 | 115.01 (14) |
| O2—C4—C5—C6 | −176.97 (14) | C5—C6—C7—C10 | 176.10 (15) |
| C3—C4—C5—C6 | 3.0 (2) | C2—C7—C10—N1 | 173.58 (15) |
| O2—C4—C5—O1 | 2.7 (2) | C6—C7—C10—N1 | −3.6 (2) |
| C3—C4—C5—O1 | −177.36 (15) | C7—C10—N1—N2 | −178.78 (14) |
| O1—C5—C6—C7 | 178.98 (15) | O4—C11—N2—N1 | 6.0 (3) |
| C4—C5—C6—C7 | −1.4 (3) | O5—C11—N2—N1 | −175.46 (13) |
| O2—C4—C3—C2 | 177.90 (15) | C10—N1—N2—C11 | 169.23 (15) |
| C5—C4—C3—C2 | −2.0 (2) | C6—C5—O1—C9 | −6.7 (3) |
| C4—C3—C2—O3 | 179.82 (14) | C4—C5—O1—C9 | 173.66 (17) |
| C4—C3—C2—C7 | −0.5 (2) | C3—C4—O2—C1 | 8.7 (2) |
| O3—C2—C7—C6 | −178.24 (14) | C5—C4—O2—C1 | −171.32 (15) |
| C3—C2—C7—C6 | 2.1 (2) | C3—C2—O3—C8 | −3.5 (2) |
| O3—C2—C7—C10 | 4.5 (2) | C7—C2—O3—C8 | 176.82 (15) |
| C3—C2—C7—C10 | −175.19 (14) | O4—C11—O5—C12 | −7.7 (2) |
| C5—C6—C7—C2 | −1.1 (2) | N2—C11—O5—C12 | 173.73 (15) |
Hydrogen-bond geometry (Å, °)
| D—H···A | D—H | H···A | D···A | D—H···A |
| N2—H2···O4i | 0.86 | 2.09 | 2.8403 (18) | 146 |
| C8—H8A···O3ii | 0.96 | 2.56 | 3.423 (2) | 150 |
Symmetry codes: (i) x, −y+1/2, z+1/2; (ii) −x+1, −y, −z+2.
Footnotes
Supplementary data and figures for this paper are available from the IUCr electronic archives (Reference: CV5126).
References
- Borg, S., Vollinga, R. C., Labarre, M., Payza, K., Terenius, L. & Luthman, K. (1999). J. Med. Chem. 42, 4331–4342. [DOI] [PubMed]
- Bruker (2002). SADABS, SMART and SAINT Bruker AXS Inc., Madison, Wisconsin, USA.
- Hadjoudis, E., Vittorakis, M. & Moustakali-Mavridis, J. (1987). Tetrahedron, 43, 1345–1360.
- Parashar, R. K., Sharma, R. C., Kumar, A. & Mohanm, G. (1988). Inorg. Chim. Acta, 151, 201–208.
- Shang, Z.-H., Zhang, H.-L. & Ding, Y. (2007). Acta Cryst. E63, o3394.
- Sheldrick, G. M. (2008). Acta Cryst. A64, 112–122. [DOI] [PubMed]
Associated Data
This section collects any data citations, data availability statements, or supplementary materials included in this article.
Supplementary Materials
Crystal structure: contains datablock(s) I, global. DOI: 10.1107/S1600536811026705/cv5126sup1.cif
Structure factors: contains datablock(s) I. DOI: 10.1107/S1600536811026705/cv5126Isup2.hkl
Supplementary material file. DOI: 10.1107/S1600536811026705/cv5126Isup3.cml
Additional supplementary materials: crystallographic information; 3D view; checkCIF report

