Skip to main content
Acta Crystallographica Section E: Structure Reports Online logoLink to Acta Crystallographica Section E: Structure Reports Online
. 2011 Jul 13;67(Pt 8):o2023. doi: 10.1107/S1600536811026705

(E)-Methyl N′-(2,4,5-trimeth­oxy­benzyl­idene)hydrazinecarboxyl­ate

Lu-Ping Lv a, Tie-Ming Yu a, Wen-Bo Yu a, Xian-Chao Hu b,*
PMCID: PMC3213474  PMID: 22091053

Abstract

The title mol­ecule, C12H16N2O5, adopts a trans configuration with respect to the C=N bond. In the crystal, inter­molecular N—H⋯O hydrogen bonds link the mol­ecules into chains in [001], and weak inter­molecular C—H⋯O inter­actions further link the chains into corrugated layers parallel to the bc plane.

Related literature

For applications of benzaldehyde­hydrazone derivatives, see: Parashar et al. (1988); Hadjoudis et al. (1987); Borg et al. (1999). For a related structure, see: Shang et al. (2007).graphic file with name e-67-o2023-scheme1.jpg

Experimental

Crystal data

  • C12H16N2O5

  • M r = 268.27

  • Monoclinic, Inline graphic

  • a = 9.9897 (15) Å

  • b = 17.606 (3) Å

  • c = 8.0801 (12) Å

  • β = 111.806 (4)°

  • V = 1319.4 (3) Å3

  • Z = 4

  • Mo Kα radiation

  • μ = 0.11 mm−1

  • T = 223 K

  • 0.18 × 0.15 × 0.12 mm

Data collection

  • Bruker SMART CCD area-detector diffractometer

  • Absorption correction: multi-scan (SADABS; Bruker, 2002) T min = 0.971, T max = 0.979

  • 9747 measured reflections

  • 2318 independent reflections

  • 1836 reflections with I > 2σ(I)

  • R int = 0.039

Refinement

  • R[F 2 > 2σ(F 2)] = 0.040

  • wR(F 2) = 0.112

  • S = 1.10

  • 2318 reflections

  • 173 parameters

  • H-atom parameters constrained

  • Δρmax = 0.19 e Å−3

  • Δρmin = −0.19 e Å−3

Data collection: SMART (Bruker, 2002); cell refinement: SAINT (Bruker, 2002); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: SHELXTL (Sheldrick, 2008); software used to prepare material for publication: SHELXTL.

Supplementary Material

Crystal structure: contains datablock(s) I, global. DOI: 10.1107/S1600536811026705/cv5126sup1.cif

e-67-o2023-sup1.cif (17.4KB, cif)

Structure factors: contains datablock(s) I. DOI: 10.1107/S1600536811026705/cv5126Isup2.hkl

e-67-o2023-Isup2.hkl (111.6KB, hkl)

Supplementary material file. DOI: 10.1107/S1600536811026705/cv5126Isup3.cml

Additional supplementary materials: crystallographic information; 3D view; checkCIF report

Table 1. Hydrogen-bond geometry (Å, °).

D—H⋯A D—H H⋯A DA D—H⋯A
N2—H2⋯O4i 0.86 2.09 2.8403 (18) 146
C8—H8A⋯O3ii 0.96 2.56 3.423 (2) 150

Symmetry codes: (i) Inline graphic; (ii) Inline graphic.

Acknowledgments

The authors thank Hangzhou Vocational and Technical College, China, for financial support.

supplementary crystallographic information

Comment

Benzaldehydehydrazone derivatives have received considerable attentions due to their pharmacological activity (Parashar et al., 1988) and photochromic properties (Hadjoudis et al., 1987). They also serve as intermidiates of 1,3,4-oxadiazoles, which have been reported to be versatile compounds with many properties (Borg et al., 1999). As a further investigation of this type of compounds, we report herein the crystal structure of the title compound (I).

The title compound (Fig.1) adopts a trans configuration with respect to the C═N bond. The hydrazine carboxylic acid methyl ester group is slightly twisted away from the attached ring. The dihedral angle between the benzene ring and the C10/C11/C12//N1/N2/O4/O5 plane is 14.23 (5)°. The bond lengths and angles agree with those observed for (E)-methyl N'-(4-hydroxybenzylidene)hydrazinecarboxylate (Shang et al., 2007).

In the crystal structure, intermolecular N—H···O hydrogen bonds (Table 1) link molecules into chains in [001], and weak intermolecular C—H···O interactions (Table 1) link further these chains into corrugated layers parallel to bc plane.

Experimental

2,4,5-Trimethoxybenzaldehyde (1.96g, 0.01mol) and methyl hydrazinecarboxylate (0.9g, 0.01mol) were dissolved in stirred methanol (20ml) and left for 5.2h at room temperature. The resulting solid was filtered off and recrystallized from ethanol to give the title compound in 91% yield. Crystals suitable for X-ray analysis were obtained by slow evaporation of a ethanol solution at room temperature (m.p. 432-435 K).

Refinement

H atoms were geometrically positioned (C—H 0.93 - 0.96 Å; N—H 0.86 Å), and refined using a riding model, with Uiso(H) = 1.2-1.5 Ueq(C, N).

Figures

Fig. 1.

Fig. 1.

Molecular structure of (I), showing 40% probability displacement ellipsoids and the atomic numbering.

Crystal data

C12H16N2O5 F(000) = 568
Mr = 268.27 Dx = 1.350 Mg m3
Monoclinic, P21/c Mo Kα radiation, λ = 0.71073 Å
Hall symbol: -P 2ybc Cell parameters from 2318 reflections
a = 9.9897 (15) Å θ = 2.2–25.0°
b = 17.606 (3) Å µ = 0.11 mm1
c = 8.0801 (12) Å T = 223 K
β = 111.806 (4)° Block, colourless
V = 1319.4 (3) Å3 0.18 × 0.15 × 0.12 mm
Z = 4

Data collection

Bruker SMART CCD area-detector diffractometer 2318 independent reflections
Radiation source: fine-focus sealed tube 1836 reflections with I > 2σ(I)
graphite Rint = 0.039
φ and ω scans θmax = 25.0°, θmin = 2.2°
Absorption correction: multi-scan (SADABS; Bruker, 2002) h = −11→11
Tmin = 0.971, Tmax = 0.979 k = −20→20
9747 measured reflections l = −9→9

Refinement

Refinement on F2 Secondary atom site location: difference Fourier map
Least-squares matrix: full Hydrogen site location: inferred from neighbouring sites
R[F2 > 2σ(F2)] = 0.040 H-atom parameters constrained
wR(F2) = 0.112 w = 1/[σ2(Fo2) + (0.0529P)2 + 0.1933P] where P = (Fo2 + 2Fc2)/3
S = 1.10 (Δ/σ)max < 0.001
2318 reflections Δρmax = 0.19 e Å3
173 parameters Δρmin = −0.19 e Å3
0 restraints Extinction correction: SHELXL97 (Sheldrick, 2008), Fc*=kFc[1+0.001xFc2λ3/sin(2θ)]-1/4
Primary atom site location: structure-invariant direct methods Extinction coefficient: 0.014 (2)

Special details

Geometry. All esds (except the esd in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell esds are taken into account individually in the estimation of esds in distances, angles and torsion angles; correlations between esds in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell esds is used for estimating esds involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > 2sigma(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.

Fractional atomic coordinates and isotropic or equivalent isotropic displacement parameters (Å2)

x y z Uiso*/Ueq
C1 0.0907 (2) −0.07569 (10) 0.1659 (3) 0.0495 (5)
H1A 0.0345 −0.0999 0.0554 0.074*
H1B 0.0279 −0.0567 0.2218 0.074*
H1C 0.1565 −0.1118 0.2432 0.074*
C4 0.25538 (17) 0.02726 (9) 0.2728 (2) 0.0379 (4)
C5 0.31441 (18) 0.09331 (9) 0.2291 (2) 0.0393 (4)
C9 0.3154 (3) 0.17706 (12) −0.0014 (3) 0.0740 (7)
H9A 0.2793 0.1803 −0.1291 0.111*
H9B 0.4188 0.1796 0.0445 0.111*
H9C 0.2780 0.2185 0.0455 0.111*
C6 0.40772 (18) 0.13694 (9) 0.3631 (2) 0.0375 (4)
H6 0.4482 0.1800 0.3339 0.045*
C3 0.28653 (17) 0.00903 (9) 0.4492 (2) 0.0374 (4)
H3 0.2450 −0.0338 0.4779 0.045*
C2 0.37954 (17) 0.05417 (9) 0.5844 (2) 0.0366 (4)
C8 0.3448 (2) −0.02382 (11) 0.8084 (3) 0.0529 (5)
H8A 0.3788 −0.0283 0.9358 0.079*
H8B 0.3666 −0.0696 0.7588 0.079*
H8C 0.2424 −0.0158 0.7618 0.079*
C7 0.44350 (17) 0.11824 (9) 0.5432 (2) 0.0349 (4)
C10 0.54924 (18) 0.16166 (9) 0.6853 (2) 0.0381 (4)
H10 0.5663 0.1494 0.8034 0.046*
C11 0.81188 (18) 0.30059 (9) 0.7763 (2) 0.0360 (4)
C12 1.0210 (2) 0.37093 (12) 0.9307 (3) 0.0608 (6)
H12A 1.0813 0.3852 1.0498 0.091*
H12B 0.9823 0.4157 0.8618 0.091*
H12C 1.0771 0.3431 0.8769 0.091*
N1 0.61921 (14) 0.21635 (7) 0.65137 (17) 0.0357 (4)
N2 0.71776 (15) 0.25135 (8) 0.79917 (17) 0.0404 (4)
H2 0.7189 0.2418 0.9040 0.049*
O1 0.27162 (15) 0.10777 (7) 0.04985 (16) 0.0559 (4)
O2 0.16975 (13) −0.01434 (7) 0.13198 (16) 0.0520 (4)
O3 0.41409 (14) 0.03895 (7) 0.76186 (16) 0.0501 (4)
O4 0.81346 (14) 0.32263 (7) 0.63555 (16) 0.0488 (4)
O5 0.90455 (14) 0.32388 (7) 0.93597 (16) 0.0530 (4)

Atomic displacement parameters (Å2)

U11 U22 U33 U12 U13 U23
C1 0.0485 (11) 0.0418 (10) 0.0529 (11) −0.0116 (8) 0.0126 (9) −0.0047 (8)
C4 0.0334 (9) 0.0372 (9) 0.0420 (10) −0.0014 (7) 0.0128 (8) −0.0043 (7)
C5 0.0406 (10) 0.0415 (9) 0.0363 (10) −0.0020 (8) 0.0150 (8) −0.0014 (7)
C9 0.1031 (19) 0.0639 (14) 0.0460 (12) −0.0276 (13) 0.0170 (12) 0.0066 (10)
C6 0.0379 (9) 0.0362 (9) 0.0411 (10) −0.0031 (7) 0.0178 (8) −0.0002 (7)
C3 0.0343 (9) 0.0349 (9) 0.0460 (11) −0.0018 (7) 0.0183 (8) 0.0003 (7)
C2 0.0339 (9) 0.0380 (9) 0.0391 (10) 0.0016 (7) 0.0150 (7) 0.0016 (7)
C8 0.0610 (13) 0.0518 (11) 0.0482 (11) −0.0143 (9) 0.0230 (10) 0.0053 (9)
C7 0.0324 (8) 0.0345 (9) 0.0394 (10) 0.0011 (7) 0.0150 (7) −0.0022 (7)
C10 0.0396 (9) 0.0404 (9) 0.0362 (9) −0.0017 (8) 0.0164 (8) −0.0006 (7)
C11 0.0407 (9) 0.0346 (9) 0.0348 (10) −0.0027 (7) 0.0163 (8) −0.0030 (7)
C12 0.0441 (11) 0.0646 (13) 0.0714 (15) −0.0194 (10) 0.0187 (10) −0.0095 (11)
N1 0.0356 (7) 0.0374 (7) 0.0337 (8) −0.0032 (6) 0.0124 (6) −0.0038 (6)
N2 0.0460 (8) 0.0475 (8) 0.0281 (8) −0.0127 (7) 0.0141 (7) −0.0033 (6)
O1 0.0700 (9) 0.0561 (8) 0.0372 (7) −0.0229 (7) 0.0146 (6) 0.0005 (6)
O2 0.0565 (8) 0.0511 (8) 0.0439 (7) −0.0195 (6) 0.0132 (6) −0.0063 (6)
O3 0.0594 (8) 0.0510 (8) 0.0386 (7) −0.0180 (6) 0.0168 (6) 0.0013 (5)
O4 0.0612 (8) 0.0506 (7) 0.0403 (8) −0.0135 (6) 0.0255 (6) −0.0020 (6)
O5 0.0510 (8) 0.0632 (8) 0.0408 (7) −0.0249 (6) 0.0125 (6) −0.0062 (6)

Geometric parameters (Å, °)

C1—O2 1.423 (2) C2—C7 1.396 (2)
C1—H1A 0.9600 C8—O3 1.426 (2)
C1—H1B 0.9600 C8—H8A 0.9600
C1—H1C 0.9600 C8—H8B 0.9600
C4—O2 1.3562 (19) C8—H8C 0.9600
C4—C3 1.379 (2) C7—C10 1.455 (2)
C4—C5 1.407 (2) C10—N1 1.278 (2)
C5—C6 1.372 (2) C10—H10 0.9300
C5—O1 1.3730 (19) C11—O4 1.2072 (19)
C9—O1 1.409 (2) C11—N2 1.341 (2)
C9—H9A 0.9600 C11—O5 1.343 (2)
C9—H9B 0.9600 C12—O5 1.442 (2)
C9—H9C 0.9600 C12—H12A 0.9600
C6—C7 1.403 (2) C12—H12B 0.9600
C6—H6 0.9300 C12—H12C 0.9600
C3—C2 1.391 (2) N1—N2 1.3790 (18)
C3—H3 0.9300 N2—H2 0.8600
C2—O3 1.371 (2)
O2—C1—H1A 109.5 O3—C8—H8B 109.5
O2—C1—H1B 109.5 H8A—C8—H8B 109.5
H1A—C1—H1B 109.5 O3—C8—H8C 109.5
O2—C1—H1C 109.5 H8A—C8—H8C 109.5
H1A—C1—H1C 109.5 H8B—C8—H8C 109.5
H1B—C1—H1C 109.5 C2—C7—C6 118.29 (15)
O2—C4—C3 124.82 (15) C2—C7—C10 119.92 (15)
O2—C4—C5 115.38 (15) C6—C7—C10 121.72 (15)
C3—C4—C5 119.79 (15) N1—C10—C7 121.40 (15)
C6—C5—O1 125.66 (15) N1—C10—H10 119.3
C6—C5—C4 119.35 (15) C7—C10—H10 119.3
O1—C5—C4 114.99 (14) O4—C11—N2 126.36 (16)
O1—C9—H9A 109.5 O4—C11—O5 124.16 (15)
O1—C9—H9B 109.5 N2—C11—O5 109.47 (14)
H9A—C9—H9B 109.5 O5—C12—H12A 109.5
O1—C9—H9C 109.5 O5—C12—H12B 109.5
H9A—C9—H9C 109.5 H12A—C12—H12B 109.5
H9B—C9—H9C 109.5 O5—C12—H12C 109.5
C5—C6—C7 121.62 (15) H12A—C12—H12C 109.5
C5—C6—H6 119.2 H12B—C12—H12C 109.5
C7—C6—H6 119.2 C10—N1—N2 114.97 (13)
C4—C3—C2 120.49 (15) C11—N2—N1 118.74 (13)
C4—C3—H3 119.8 C11—N2—H2 120.6
C2—C3—H3 119.8 N1—N2—H2 120.6
O3—C2—C3 123.04 (14) C5—O1—C9 117.49 (14)
O3—C2—C7 116.58 (14) C4—O2—C1 118.08 (14)
C3—C2—C7 120.38 (15) C2—O3—C8 117.95 (13)
O3—C8—H8A 109.5 C11—O5—C12 115.01 (14)
O2—C4—C5—C6 −176.97 (14) C5—C6—C7—C10 176.10 (15)
C3—C4—C5—C6 3.0 (2) C2—C7—C10—N1 173.58 (15)
O2—C4—C5—O1 2.7 (2) C6—C7—C10—N1 −3.6 (2)
C3—C4—C5—O1 −177.36 (15) C7—C10—N1—N2 −178.78 (14)
O1—C5—C6—C7 178.98 (15) O4—C11—N2—N1 6.0 (3)
C4—C5—C6—C7 −1.4 (3) O5—C11—N2—N1 −175.46 (13)
O2—C4—C3—C2 177.90 (15) C10—N1—N2—C11 169.23 (15)
C5—C4—C3—C2 −2.0 (2) C6—C5—O1—C9 −6.7 (3)
C4—C3—C2—O3 179.82 (14) C4—C5—O1—C9 173.66 (17)
C4—C3—C2—C7 −0.5 (2) C3—C4—O2—C1 8.7 (2)
O3—C2—C7—C6 −178.24 (14) C5—C4—O2—C1 −171.32 (15)
C3—C2—C7—C6 2.1 (2) C3—C2—O3—C8 −3.5 (2)
O3—C2—C7—C10 4.5 (2) C7—C2—O3—C8 176.82 (15)
C3—C2—C7—C10 −175.19 (14) O4—C11—O5—C12 −7.7 (2)
C5—C6—C7—C2 −1.1 (2) N2—C11—O5—C12 173.73 (15)

Hydrogen-bond geometry (Å, °)

D—H···A D—H H···A D···A D—H···A
N2—H2···O4i 0.86 2.09 2.8403 (18) 146
C8—H8A···O3ii 0.96 2.56 3.423 (2) 150

Symmetry codes: (i) x, −y+1/2, z+1/2; (ii) −x+1, −y, −z+2.

Footnotes

Supplementary data and figures for this paper are available from the IUCr electronic archives (Reference: CV5126).

References

  1. Borg, S., Vollinga, R. C., Labarre, M., Payza, K., Terenius, L. & Luthman, K. (1999). J. Med. Chem. 42, 4331–4342. [DOI] [PubMed]
  2. Bruker (2002). SADABS, SMART and SAINT Bruker AXS Inc., Madison, Wisconsin, USA.
  3. Hadjoudis, E., Vittorakis, M. & Moustakali-Mavridis, J. (1987). Tetrahedron, 43, 1345–1360.
  4. Parashar, R. K., Sharma, R. C., Kumar, A. & Mohanm, G. (1988). Inorg. Chim. Acta, 151, 201–208.
  5. Shang, Z.-H., Zhang, H.-L. & Ding, Y. (2007). Acta Cryst. E63, o3394.
  6. Sheldrick, G. M. (2008). Acta Cryst. A64, 112–122. [DOI] [PubMed]

Associated Data

This section collects any data citations, data availability statements, or supplementary materials included in this article.

Supplementary Materials

Crystal structure: contains datablock(s) I, global. DOI: 10.1107/S1600536811026705/cv5126sup1.cif

e-67-o2023-sup1.cif (17.4KB, cif)

Structure factors: contains datablock(s) I. DOI: 10.1107/S1600536811026705/cv5126Isup2.hkl

e-67-o2023-Isup2.hkl (111.6KB, hkl)

Supplementary material file. DOI: 10.1107/S1600536811026705/cv5126Isup3.cml

Additional supplementary materials: crystallographic information; 3D view; checkCIF report


Articles from Acta Crystallographica Section E: Structure Reports Online are provided here courtesy of International Union of Crystallography

RESOURCES