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Acta Crystallographica Section E: Structure Reports Online logoLink to Acta Crystallographica Section E: Structure Reports Online
. 2011 Jul 30;67(Pt 8):o2159. doi: 10.1107/S160053681102959X

4,4,5,5-Tetra­methyl-1,3,2λ5-dioxa­phospho­lan-2-one

Anna Skarżyńska a, Anna M Trzeciak a, Andrzej Gniewek a,*
PMCID: PMC3213595  PMID: 22091172

Abstract

The five-membered ring in the title compound, C6H13O3P, exists in an envelope conformation with one of the ring C atoms at the flap position. The coordination geometry around the P atom is a distorted tetra­hedron. The crystal structure is stabilized by several weak C—H⋯O and P—H⋯O hydrogen bonds, forming a three-dimensional network.

Related literature

For a discussion of 1,3,2-dioxaphospho­lane chemistry, see: Maffei & Buono (2003); Zwierzak (1967) and for the Heck reaction, see: Beletskaya & Cheprakov (2000); Skarżyńska et al. (2011). For hydrogen-bond inter­actions, see: Desiraju & Steiner (1999). For bond lengths in organic compounds, see: Allen et al. (1987). For details of the temperature control applied during data collection, see: Cosier & Glazer (1986) and for specifications of the analytical numeric absorption correction, see: Clark & Reid (1995).graphic file with name e-67-o2159-scheme1.jpg

Experimental

Crystal data

  • C6H13O3P

  • M r = 164.13

  • Monoclinic, Inline graphic

  • a = 7.144 (2) Å

  • b = 7.570 (2) Å

  • c = 15.064 (4) Å

  • β = 90.98 (2)°

  • V = 814.5 (4) Å3

  • Z = 4

  • Mo Kα radiation

  • μ = 0.29 mm−1

  • T = 100 K

  • 0.33 × 0.27 × 0.26 mm

Data collection

  • Kuma KM-4 diffractometer with CCD detector

  • Absorption correction: analytical (CrysAlis RED; Oxford Diffraction, 2010) T min = 0.910, T max = 0.952

  • 7254 measured reflections

  • 1869 independent reflections

  • 1673 reflections with I > 2σ(I)

  • R int = 0.021

Refinement

  • R[F 2 > 2σ(F 2)] = 0.035

  • wR(F 2) = 0.096

  • S = 1.10

  • 1869 reflections

  • 143 parameters

  • All H-atom parameters refined

  • Δρmax = 0.49 e Å−3

  • Δρmin = −0.30 e Å−3

Data collection: CrysAlis CCD (Oxford Diffraction, 2010); cell refinement: CrysAlis RED (Oxford Diffraction, 2010); data reduction: CrysAlis RED; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: ORTEP-3 (Farrugia, 1997); software used to prepare material for publication: SHELXL97.

Supplementary Material

Crystal structure: contains datablock(s) global, I. DOI: 10.1107/S160053681102959X/bt5583sup1.cif

e-67-o2159-sup1.cif (19.4KB, cif)

Structure factors: contains datablock(s) I. DOI: 10.1107/S160053681102959X/bt5583Isup2.hkl

e-67-o2159-Isup2.hkl (90.1KB, hkl)

Supplementary material file. DOI: 10.1107/S160053681102959X/bt5583Isup3.cml

Additional supplementary materials: crystallographic information; 3D view; checkCIF report

Table 1. Hydrogen-bond geometry (Å, °).

D—H⋯A D—H H⋯A DA D—H⋯A
C11—H113⋯Oi 0.98 (2) 2.70 (2) 3.583 (2) 150 (2)
C12—H123⋯Oi 1.00 (2) 2.60 (2) 3.499 (2) 150 (2)
C21—H213⋯Oi 0.96 (2) 2.68 (2) 3.544 (2) 148 (2)
C22—H222⋯O1ii 0.98 (2) 2.64 (2) 3.515 (2) 148 (2)
P—H⋯O1iii 1.28 (2) 2.58 (2) 3.4713 (12) 124 (1)

Symmetry codes: (i) Inline graphic; (ii) Inline graphic; (iii) Inline graphic.

Acknowledgments

This work was partially supported by the Polish Ministry of Science and Higher Education through grant No. N204 028538. The financial support is gratefully acknowledged.

supplementary crystallographic information

Comment

Carbon-carbon bond-forming catalytic reactions are very important fundamental processes in synthetic chemistry. Among them, one of the commonly recognized is the Heck reaction employing as the catalyst precursors palladium compounds with phosphorus ligands (Beletskaya & Cheprakov, 2000). Complexes incorporating in their structure 1,3,2-dioxaphospholane heterocyclic rings have been recently found to be efficient catalysts of the Heck reaction carried out under mild conditions (Skarżyńska et al., 2011). In this paper we report the synthesis and crystallization of tetramethyl dioxaphospholane, the title compound.

The geometric parameters around the four-coordinate phosphorus atom (Fig. 1) indicate a deformation of the ideal tetrahedron towards a trigonal pyramid. The O—P—O1 and O—P—O2 angles differ considerably from the ideal value of 109.5° and approach 120°, while O1—P—O2 is close to 90°. Such deformations might be explained by the effect of different substituents and bond types. Bond lengths P—O1, P—O2, P—O, and P—H are typical (Allen et al., 1987). The heterocyclic five-membered ring P/O1/C1/C2/O2 adopts an envelope conformation with the C1 atom deviating from the four-atom plane by about 0.55 Å.

The crystal structure is stabilized by a few hydrogen bonds of the C—H···O and P—H···O types (Desiraju & Steiner, 1999). Consequently, a three-dimensional network of such interactions is formed in the crystal. The C11, C12 and C21 atoms act as hydrogen-bond donors, via H113, H123 and H213, respectively, to the Oi atom [symmetry code: (i) x, –y + 1/2, z + 1/2] as an acceptor (Table 1). As a result, chains running parallel to the [001] direction are formed. The adjacent chains of the molecules are further linked by C22—H222···O1ii and P—H···O1iii hydrogen interactions [symmetry codes: (ii) –x, y – 1/2, –z + 1/2; (iii) –x + 1, y – 1/2, –z + 1/2].

Experimental

The title compound may be prepared according to the known procedures: utilizing pinacol and phosphorus trichloride, followed by hydrolysis (Zwierzak, 1967) or involving a transestrification process between pinacol and diethyl phosphite (Maffei & Buono, 2003). Here we report an alternative route. Crystallization of 2,2,3,3,7,7,8,8-octamethyl-1,4,6,9–5λ5-phosphaspiro[4.4]nonane in non-dried diethyl ether leads to hydrolysis of the tetraoxaspirophosphorane. As a result, 4,4,5,5-teramethyl-1,3,2-dioxaphospholane 2-oxide is formed as single crystals.

Refinement

All H atoms were found in a difference Fourier map and refined isotropically. The measured C—H distances in methyl groups are in range 0.92 (2)–1.00 (2)Å and P—H bond length is 1.28 (2) Å. The highest residual peak and the deepest hole in the final difference map are located 0.77 and 0.76Å from the C1 and P atom, respectively.

Figures

Fig. 1.

Fig. 1.

The molecular structure and atom numbering scheme of the title compound. Displacement ellipsoids are drawn at the 30% probability level and H atoms are shown as small spheres of arbitrary radii.

Crystal data

C6H13O3P F(000) = 352
Mr = 164.13 Dx = 1.338 Mg m3
Monoclinic, P21/c Mo Kα radiation, λ = 0.71073 Å
Hall symbol: -P 2ybc Cell parameters from 4820 reflections
a = 7.144 (2) Å θ = 3.0–27.5°
b = 7.570 (2) Å µ = 0.29 mm1
c = 15.064 (4) Å T = 100 K
β = 90.98 (2)° Block, colorless
V = 814.5 (4) Å3 0.33 × 0.27 × 0.26 mm
Z = 4

Data collection

Kuma KM-4 diffractometer with CCD detector 1869 independent reflections
Radiation source: fine-focus sealed tube 1673 reflections with I > 2σ(I)
graphite Rint = 0.021
ω scans θmax = 27.5°, θmin = 3.0°
Absorption correction: analytical (CrysAlis RED; Oxford Diffraction, 2010) h = −9→9
Tmin = 0.910, Tmax = 0.952 k = −9→9
7254 measured reflections l = −19→13

Refinement

Refinement on F2 Primary atom site location: structure-invariant direct methods
Least-squares matrix: full Secondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.035 Hydrogen site location: difference Fourier map
wR(F2) = 0.096 All H-atom parameters refined
S = 1.10 w = 1/[σ2(Fo2) + (0.0645P)2 + 0.1298P] where P = (Fo2 + 2Fc2)/3
1869 reflections (Δ/σ)max < 0.001
143 parameters Δρmax = 0.49 e Å3
0 restraints Δρmin = −0.30 e Å3

Special details

Experimental. The crystal was placed in the cold stream of an open-flow nitrogen cryostat (Cosier & Glazer, 1986) operating at 100 K. Analytical numeric absorption correction was carried out with CrysAlis RED (Oxford Diffraction, 2010) using a multifaceted crystal model (Clark & Reid, 1995).
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > 2σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F and R- factors based on ALL data will be even larger.

Fractional atomic coordinates and isotropic or equivalent isotropic displacement parameters (Å2)

x y z Uiso*/Ueq
P 0.35196 (5) 0.22996 (4) 0.21158 (2) 0.02085 (14)
H 0.528 (2) 0.199 (2) 0.2076 (11) 0.028 (4)*
O 0.26815 (19) 0.25962 (13) 0.12379 (7) 0.0376 (3)
O1 0.32677 (12) 0.38610 (11) 0.28007 (5) 0.0172 (2)
C1 0.29786 (16) 0.31569 (15) 0.37050 (8) 0.0152 (2)
C11 0.48914 (18) 0.28153 (19) 0.41307 (10) 0.0236 (3)
H111 0.553 (2) 0.190 (2) 0.3832 (12) 0.030 (4)*
H112 0.563 (3) 0.389 (3) 0.4098 (12) 0.044 (5)*
H113 0.476 (3) 0.251 (2) 0.4759 (14) 0.037 (5)*
C12 0.19155 (18) 0.45553 (17) 0.42081 (8) 0.0213 (3)
H121 0.076 (2) 0.494 (2) 0.3871 (11) 0.031 (4)*
H122 0.265 (2) 0.555 (2) 0.4267 (10) 0.026 (4)*
H123 0.163 (2) 0.408 (2) 0.4813 (11) 0.033 (4)*
O2 0.27159 (13) 0.07451 (11) 0.26996 (6) 0.0224 (2)
C2 0.18549 (16) 0.14270 (16) 0.35218 (8) 0.0168 (3)
C21 0.21170 (19) 0.00213 (17) 0.42256 (9) 0.0235 (3)
H211 0.339 (2) −0.037 (2) 0.4228 (10) 0.028 (4)*
H212 0.131 (3) −0.095 (3) 0.4074 (12) 0.037 (5)*
H213 0.179 (2) 0.044 (3) 0.4806 (12) 0.040 (5)*
C22 −0.02050 (19) 0.1768 (2) 0.33204 (11) 0.0278 (3)
H221 −0.039 (3) 0.273 (2) 0.2898 (13) 0.034 (5)*
H222 −0.069 (2) 0.063 (3) 0.3105 (11) 0.040 (5)*
H223 −0.082 (3) 0.215 (2) 0.3860 (13) 0.029 (4)*

Atomic displacement parameters (Å2)

U11 U22 U33 U12 U13 U23
P 0.0308 (2) 0.0184 (2) 0.0136 (2) 0.00484 (12) 0.00665 (14) 0.00041 (11)
O 0.0656 (8) 0.0339 (6) 0.0132 (5) 0.0071 (5) 0.0000 (5) −0.0014 (4)
O1 0.0224 (4) 0.0161 (4) 0.0131 (4) 0.0004 (3) 0.0037 (3) 0.0011 (3)
C1 0.0160 (5) 0.0173 (5) 0.0123 (5) −0.0012 (4) 0.0002 (4) 0.0012 (4)
C11 0.0167 (6) 0.0305 (7) 0.0235 (7) −0.0014 (5) −0.0050 (5) 0.0027 (5)
C12 0.0271 (6) 0.0195 (6) 0.0175 (6) 0.0021 (5) 0.0032 (5) −0.0034 (5)
O2 0.0343 (5) 0.0159 (4) 0.0171 (4) 0.0007 (4) 0.0071 (4) −0.0023 (3)
C2 0.0175 (5) 0.0169 (5) 0.0162 (5) −0.0005 (4) 0.0027 (4) −0.0012 (4)
C21 0.0282 (6) 0.0194 (6) 0.0232 (7) −0.0016 (5) 0.0061 (5) 0.0051 (5)
C22 0.0173 (6) 0.0290 (7) 0.0368 (8) −0.0047 (5) −0.0031 (5) −0.0009 (6)

Geometric parameters (Å, °)

P—O 1.4596 (12) C12—H123 1.00 (2)
P—H 1.28 (2) C1—C2 1.5582 (16)
P—O1 1.5812 (10) O2—C2 1.4850 (14)
P—O2 1.5827 (10) C2—C21 1.5115 (16)
O1—C1 1.4806 (14) C2—C22 1.5196 (16)
C1—C12 1.5137 (16) C21—H211 0.96 (2)
C1—C11 1.5216 (16) C21—H212 0.96 (2)
C11—H111 0.95 (2) C21—H213 0.96 (2)
C11—H112 0.98 (2) C22—H221 0.98 (2)
C11—H113 0.98 (2) C22—H222 0.98 (2)
C12—H121 1.00 (2) C22—H223 0.97 (2)
C12—H122 0.92 (2)
O—P—O1 115.26 (6) H121—C12—H122 106 (2)
O—P—O2 118.08 (6) H121—C12—H123 113 (2)
O—P—H 112.0 (8) H122—C12—H123 109 (2)
O1—P—O2 98.44 (6) C2—O2—P 111.37 (7)
O1—P—H 106.9 (8) O2—C2—C21 106.99 (10)
O2—P—H 104.7 (8) O2—C2—C22 107.82 (10)
C1—O1—P 110.52 (7) C21—C2—C22 111.57 (10)
O1—C1—C11 108.09 (10) O2—C2—C1 102.73 (9)
O1—C1—C12 106.74 (10) C21—C2—C1 114.22 (10)
C12—C1—C11 111.25 (10) C22—C2—C1 112.75 (10)
O1—C1—C2 102.66 (9) C2—C21—H211 109.1 (12)
C11—C1—C2 112.83 (10) C2—C21—H212 107.7 (12)
C12—C1—C2 114.52 (10) C2—C21—H213 112.1 (12)
C1—C11—H111 111.0 (12) H211—C21—H212 109 (2)
C1—C11—H112 108.7 (12) H211—C21—H213 110 (2)
C1—C11—H113 110.5 (12) H212—C21—H213 109 (2)
H111—C11—H112 109 (2) C2—C22—H221 112.1 (12)
H111—C11—H113 110 (2) C2—C22—H222 104.5 (12)
H112—C11—H113 108 (2) C2—C22—H223 109.4 (12)
C1—C12—H121 111.4 (12) H221—C22—H222 113 (2)
C1—C12—H122 109.0 (12) H221—C22—H223 105 (2)
C1—C12—H123 108.5 (12) H222—C22—H223 112 (2)
O—P—O1—C1 143.16 (9) O1—C1—C2—O2 37.31 (10)
O2—P—O1—C1 16.56 (8) C11—C1—C2—O2 −78.79 (12)
P—O1—C1—C11 85.34 (8) C12—C1—C2—O2 152.58 (12)
P—O1—C1—C12 −154.89 (10) O1—C1—C2—C21 152.79 (10)
P—O1—C1—C2 −34.11 (10) C11—C1—C2—C21 36.69 (12)
O—P—O2—C2 −116.09 (9) C12—C1—C2—C21 −91.94 (12)
O1—P—O2—C2 8.52 (8) O1—C1—C2—C22 −78.47 (10)
P—O2—C2—C21 −149.19 (8) C11—C1—C2—C22 165.44 (12)
P—O2—C2—C22 90.67 (10) C12—C1—C2—C22 36.80 (12)
P—O2—C2—C1 −28.61 (10)

Hydrogen-bond geometry (Å, °)

D—H···A D—H H···A D···A D—H···A
C11—H113···Oi 0.98 (2) 2.70 (2) 3.583 (2) 150 (2)
C12—H123···Oi 1.00 (2) 2.60 (2) 3.499 (2) 150 (2)
C21—H213···Oi 0.96 (2) 2.68 (2) 3.544 (2) 148 (2)
C22—H222···O1ii 0.98 (2) 2.64 (2) 3.515 (2) 148 (2)
P—H···O1iii 1.28 (2) 2.58 (2) 3.4713 (12) 124 (1)

Symmetry codes: (i) x, −y+1/2, z+1/2; (ii) −x, y−1/2, −z+1/2; (iii) −x+1, y−1/2, −z+1/2.

Footnotes

Supplementary data and figures for this paper are available from the IUCr electronic archives (Reference: BT5583).

References

  1. Allen, F. H., Kennard, O., Watson, D. G., Brammer, L., Orpen, A. G. & Taylor, R. (1987). J. Chem. Soc. Perkin Trans. 2, pp. S1–19.
  2. Beletskaya, I. P. & Cheprakov, A. V. (2000). Chem. Rev. 100, 3009–3066. [DOI] [PubMed]
  3. Clark, R. C. & Reid, J. S. (1995). Acta Cryst. A51, 887–897.
  4. Cosier, J. & Glazer, A. M. (1986). J. Appl. Cryst. 19, 105–107.
  5. Desiraju, G. R. & Steiner, T. (1999). The Weak Hydrogen Bond in Structural Chemistry and Biology New York: Oxford University Press.
  6. Farrugia, L. J. (1997). J. Appl. Cryst. 30, 565.
  7. Maffei, M. & Buono, G. (2003). Tetrahedron, 59, 8821–8825.
  8. Oxford Diffraction (2010). CrysAlis CCD and CrysAlis RED Oxford Diffraction Ltd, Wrocław, Poland.
  9. Sheldrick, G. M. (2008). Acta Cryst. A64, 112–122. [DOI] [PubMed]
  10. Skarżyńska, A., Trzeciak, A. M. & Siczek, M. (2011). Inorg. Chim. Acta, 365, 204–210.
  11. Zwierzak, A. (1967). Can. J. Chem. 45, 2501–2512.

Associated Data

This section collects any data citations, data availability statements, or supplementary materials included in this article.

Supplementary Materials

Crystal structure: contains datablock(s) global, I. DOI: 10.1107/S160053681102959X/bt5583sup1.cif

e-67-o2159-sup1.cif (19.4KB, cif)

Structure factors: contains datablock(s) I. DOI: 10.1107/S160053681102959X/bt5583Isup2.hkl

e-67-o2159-Isup2.hkl (90.1KB, hkl)

Supplementary material file. DOI: 10.1107/S160053681102959X/bt5583Isup3.cml

Additional supplementary materials: crystallographic information; 3D view; checkCIF report


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