Abstract
The title compound, C15H12N4O2, contains two substituted benzohydrazide and indole rings linked via a C=N double bond. The dihedral angle between the benzene ring and the indole ring system is 11.38 (10)°. The molecular structure is stabilized by an intramolecular N—H⋯O hydrogen bond, forming a six-membered ring. The crystal structure is consolidated by intermolecular N—H⋯O and C—H⋯O interactions, which result in sheets.
Related literature
For the biological activity of related compounds, see: Ashiq et al. (2008 ▶); Maqsood et al. (2006 ▶); Sarangapani & Reddy (1994 ▶). For related structures, see: Bai et al. (2006 ▶); Yang & Pan (2004 ▶).
Experimental
Crystal data
C15H12N4O2
M r = 280.29
Monoclinic,
a = 8.8036 (8) Å
b = 8.9040 (7) Å
c = 17.0732 (14) Å
β = 92.335 (2)°
V = 1337.21 (19) Å3
Z = 4
Mo Kα radiation
μ = 0.10 mm−1
T = 273 K
0.17 × 0.17 × 0.12 mm
Data collection
Bruker SMART APEX CCD area-detector diffractometer
Absorption correction: multi-scan (SADABS; Bruker, 2000 ▶) T min = 0.984, T max = 0.989
7637 measured reflections
2491 independent reflections
1551 reflections with I > 2σ(I)
R int = 0.047
Refinement
R[F 2 > 2σ(F 2)] = 0.052
wR(F 2) = 0.122
S = 0.99
2491 reflections
198 parameters
1 restraint
H atoms treated by a mixture of independent and constrained refinement
Δρmax = 0.18 e Å−3
Δρmin = −0.17 e Å−3
Data collection: SMART (Bruker, 2000 ▶); cell refinement: SAINT (Bruker, 2000 ▶); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: SHELXTL (Sheldrick, 2008 ▶); software used to prepare material for publication: SHELXTL, PARST (Nardelli, 1995 ▶) and PLATON (Spek, 2009 ▶).
Supplementary Material
Crystal structure: contains datablock(s) global, I. DOI: 10.1107/S1600536811029242/pv2431sup1.cif
Structure factors: contains datablock(s) I. DOI: 10.1107/S1600536811029242/pv2431Isup2.hkl
Supplementary material file. DOI: 10.1107/S1600536811029242/pv2431Isup3.cml
Additional supplementary materials: crystallographic information; 3D view; checkCIF report
Table 1. Hydrogen-bond geometry (Å, °).
| D—H⋯A | D—H | H⋯A | D⋯A | D—H⋯A |
|---|---|---|---|---|
| N1—H1A⋯O2i | 0.86 | 2.02 | 2.785 (2) | 148 |
| N3—H3A⋯O1 | 0.86 | 2.09 | 2.757 (2) | 133 |
| N4—H4C⋯N2ii | 0.86 (2) | 2.61 (2) | 3.423 (3) | 158 (2) |
| C12—H12A⋯O1iii | 0.93 | 2.59 | 3.424 (3) | 149 |
Symmetry codes: (i)
; (ii)
; (iii)
.
Acknowledgments
The authors are thankful to the Higher Education Commission (HEC) Pakistan for financial support under the National Research Grants Program for Universities (grant No. 20–1862/R&D/10).
supplementary crystallographic information
Comment
Compounds containing hydrazide moiety have been revealed to exhibit a wide variety of interesting biological properties (Ashiq et al. 2008; Maqsood et al. 2006). In a quest to expand and further explore the biological significance of hydrazides, we have undertken a task to synthesize new Schiff bases of isatin with hydrazides. Isatins are very important compounds due to their antifungal properties (Sarangapani & Reddy, 1994). In this article we report the synthesis and crystal structure of the title compound.
The title molecule (Fig. 1) consists of substituted benzohydrazide and indole rings linked by C═N bond. The dihedral angle between the two substituted benzene (C10—C15) and indole ring (N1/C1—C8) is 11.38 (10)°. The bond lengths and angles are in normal range as in other structurally related compounds (Bai et al. 2006; Yang & Pan, 2004). The geometry of the molecule is stabilized by N3—H3A···O1 intramolecular hydrogen bond resulting in a six membered ring. In the crystal structure, the molecules are linked to form two-dimensional sheets via N1—H1A···O2, N4—H4C···N2 and C12—H12A···O1 intermolecular hydrogen bonds (Tab. 1 & Fig. 2).
Experimental
To a solution of 2,3-indolinedione (10 mmol, 1.47 g) in 15 ml of ethanol with a few drops of glacial acetic acid and 3-aminobenzohydrazide (10 mmol, 1.51 g) in 15 ml ethanol were added. The mixture was refluxed for 2 h and a solid was obtained upon removal of the solvent by rotary evaporation. The resulting solid was washed with ethanol to afford the title compound (yield 75%). The crystals of the title compound suitable for XRD analysis were grown from a mixture of ethanol and methanol (1:1) by slow evaporation at room temperature.
Refinement
H atoms on the C atoms and N1 and N3 were positioned geomatrically with C–H = 0.93 and N–H = 0.86 Å and constrained to ride on their parent atoms with Uiso(H) = 1.2Ueq(C/N). The H atoms on N4 were located from a difference Fourier map and refined isotropically.
Figures
Fig. 1.
The molecular structure of the title molecule with displacement ellipsoids drawn at 50% probability level. The dashed lines indicate intramolecular hydrogen bond.
Fig. 2.
The crystal packing of the title compound.Hydrogen atoms not involved in hydrogen bonding have been excluded for clarity.
Crystal data
| C15H12N4O2 | F(000) = 584 |
| Mr = 280.29 | Dx = 1.392 Mg m−3 |
| Monoclinic, P21/c | Mo Kα radiation, λ = 0.71073 Å |
| Hall symbol: -P 2ybc | Cell parameters from 1161 reflections |
| a = 8.8036 (8) Å | θ = 2.4–27.8° |
| b = 8.9040 (7) Å | µ = 0.10 mm−1 |
| c = 17.0732 (14) Å | T = 273 K |
| β = 92.335 (2)° | Block, colorless |
| V = 1337.21 (19) Å3 | 0.17 × 0.17 × 0.12 mm |
| Z = 4 |
Data collection
| Bruker SMART APEX CCD area-detector diffractometer | 2491 independent reflections |
| Radiation source: fine-focus sealed tube | 1551 reflections with I > 2σ(I) |
| graphite | Rint = 0.047 |
| ω scans | θmax = 25.5°, θmin = 2.3° |
| Absorption correction: multi-scan (SADABS; Bruker, 2000) | h = −10→10 |
| Tmin = 0.984, Tmax = 0.989 | k = −10→10 |
| 7637 measured reflections | l = −20→20 |
Refinement
| Refinement on F2 | Primary atom site location: structure-invariant direct methods |
| Least-squares matrix: full | Secondary atom site location: difference Fourier map |
| R[F2 > 2σ(F2)] = 0.052 | Hydrogen site location: inferred from neighbouring sites |
| wR(F2) = 0.122 | H atoms treated by a mixture of independent and constrained refinement |
| S = 0.99 | w = 1/[σ2(Fo2) + (0.0584P)2] where P = (Fo2 + 2Fc2)/3 |
| 2491 reflections | (Δ/σ)max < 0.001 |
| 198 parameters | Δρmax = 0.18 e Å−3 |
| 1 restraint | Δρmin = −0.17 e Å−3 |
Special details
| Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
| Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger. |
Fractional atomic coordinates and isotropic or equivalent isotropic displacement parameters (Å2)
| x | y | z | Uiso*/Ueq | ||
| O1 | 0.66942 (18) | 0.35101 (18) | −0.07613 (8) | 0.0531 (5) | |
| O2 | 0.53184 (19) | 0.37905 (18) | 0.20442 (8) | 0.0568 (5) | |
| N1 | 0.5172 (2) | 0.1671 (2) | −0.13475 (10) | 0.0470 (5) | |
| H1A | 0.5578 | 0.1631 | −0.1797 | 0.056* | |
| N2 | 0.4730 (2) | 0.27880 (19) | 0.06115 (9) | 0.0407 (5) | |
| N3 | 0.5848 (2) | 0.38136 (19) | 0.07676 (9) | 0.0415 (5) | |
| H3A | 0.6377 | 0.4169 | 0.0398 | 0.050* | |
| N4 | 0.8354 (3) | 0.8078 (3) | 0.32398 (15) | 0.0676 (7) | |
| C1 | 0.2412 (3) | 0.0351 (3) | −0.00233 (13) | 0.0488 (6) | |
| H1B | 0.2175 | 0.0545 | 0.0493 | 0.059* | |
| C2 | 0.1601 (3) | −0.0703 (3) | −0.04635 (15) | 0.0557 (7) | |
| H2A | 0.0815 | −0.1229 | −0.0241 | 0.067* | |
| C3 | 0.1950 (3) | −0.0980 (3) | −0.12350 (14) | 0.0569 (7) | |
| H3B | 0.1379 | −0.1682 | −0.1524 | 0.068* | |
| C4 | 0.3119 (3) | −0.0245 (3) | −0.15845 (13) | 0.0523 (7) | |
| H4A | 0.3354 | −0.0442 | −0.2101 | 0.063* | |
| C5 | 0.3923 (2) | 0.0790 (2) | −0.11405 (12) | 0.0417 (6) | |
| C6 | 0.5659 (3) | 0.2585 (3) | −0.07583 (12) | 0.0409 (6) | |
| C7 | 0.4654 (2) | 0.2238 (2) | −0.00862 (11) | 0.0374 (5) | |
| C8 | 0.3583 (2) | 0.1110 (2) | −0.03664 (12) | 0.0391 (5) | |
| C9 | 0.6110 (2) | 0.4264 (2) | 0.15255 (12) | 0.0406 (6) | |
| C10 | 0.7362 (2) | 0.5353 (2) | 0.16743 (12) | 0.0400 (6) | |
| C11 | 0.8540 (3) | 0.5576 (3) | 0.11661 (13) | 0.0518 (6) | |
| H11A | 0.8582 | 0.5027 | 0.0704 | 0.062* | |
| C12 | 0.9645 (3) | 0.6629 (3) | 0.13619 (15) | 0.0606 (7) | |
| H12A | 1.0442 | 0.6778 | 0.1030 | 0.073* | |
| C13 | 0.9587 (3) | 0.7457 (3) | 0.20365 (16) | 0.0586 (7) | |
| H13A | 1.0342 | 0.8161 | 0.2154 | 0.070* | |
| C14 | 0.8416 (3) | 0.7259 (3) | 0.25467 (14) | 0.0490 (6) | |
| C15 | 0.7329 (3) | 0.6181 (2) | 0.23602 (13) | 0.0440 (6) | |
| H15A | 0.6555 | 0.6009 | 0.2704 | 0.053* | |
| H4C | 0.7478 (19) | 0.819 (3) | 0.3435 (17) | 0.099 (12)* | |
| H4B | 0.889 (4) | 0.894 (3) | 0.3239 (17) | 0.101 (11)* |
Atomic displacement parameters (Å2)
| U11 | U22 | U33 | U12 | U13 | U23 | |
| O1 | 0.0485 (10) | 0.0635 (11) | 0.0480 (9) | −0.0019 (9) | 0.0114 (8) | 0.0040 (8) |
| O2 | 0.0650 (11) | 0.0715 (12) | 0.0346 (8) | −0.0188 (9) | 0.0111 (8) | −0.0022 (8) |
| N1 | 0.0485 (12) | 0.0630 (12) | 0.0299 (9) | 0.0067 (11) | 0.0055 (9) | 0.0003 (9) |
| N2 | 0.0402 (11) | 0.0452 (11) | 0.0366 (10) | 0.0030 (9) | 0.0024 (9) | 0.0015 (8) |
| N3 | 0.0439 (11) | 0.0476 (11) | 0.0334 (10) | −0.0005 (10) | 0.0080 (9) | 0.0016 (8) |
| N4 | 0.0598 (18) | 0.0655 (16) | 0.0765 (16) | −0.0067 (14) | −0.0089 (14) | −0.0142 (14) |
| C1 | 0.0431 (14) | 0.0557 (15) | 0.0473 (13) | 0.0064 (13) | 0.0012 (12) | 0.0011 (12) |
| C2 | 0.0413 (15) | 0.0549 (16) | 0.0704 (17) | 0.0005 (13) | −0.0028 (13) | 0.0059 (14) |
| C3 | 0.0515 (16) | 0.0529 (15) | 0.0644 (17) | 0.0076 (13) | −0.0192 (14) | −0.0053 (13) |
| C4 | 0.0566 (17) | 0.0566 (15) | 0.0429 (13) | 0.0126 (14) | −0.0088 (13) | −0.0042 (12) |
| C5 | 0.0392 (13) | 0.0476 (13) | 0.0377 (12) | 0.0125 (12) | −0.0042 (11) | 0.0000 (11) |
| C6 | 0.0366 (14) | 0.0488 (14) | 0.0372 (12) | 0.0113 (12) | 0.0017 (11) | 0.0042 (11) |
| C7 | 0.0364 (13) | 0.0432 (13) | 0.0326 (11) | 0.0115 (11) | 0.0013 (10) | 0.0028 (10) |
| C8 | 0.0354 (12) | 0.0437 (13) | 0.0379 (11) | 0.0089 (11) | −0.0004 (10) | 0.0025 (10) |
| C9 | 0.0436 (14) | 0.0440 (13) | 0.0345 (12) | 0.0075 (11) | 0.0040 (11) | 0.0023 (10) |
| C10 | 0.0361 (13) | 0.0412 (13) | 0.0426 (12) | 0.0055 (11) | 0.0021 (10) | 0.0070 (11) |
| C11 | 0.0452 (15) | 0.0603 (16) | 0.0504 (13) | 0.0042 (13) | 0.0079 (12) | 0.0053 (12) |
| C12 | 0.0403 (15) | 0.0737 (18) | 0.0685 (17) | −0.0012 (14) | 0.0084 (14) | 0.0180 (15) |
| C13 | 0.0447 (16) | 0.0558 (16) | 0.0743 (17) | −0.0074 (13) | −0.0084 (14) | 0.0100 (14) |
| C14 | 0.0428 (15) | 0.0479 (14) | 0.0557 (14) | 0.0047 (12) | −0.0055 (13) | 0.0030 (12) |
| C15 | 0.0377 (13) | 0.0472 (14) | 0.0470 (13) | 0.0014 (11) | −0.0012 (11) | 0.0047 (11) |
Geometric parameters (Å, °)
| O1—C6 | 1.228 (2) | C3—H3B | 0.9300 |
| O2—C9 | 1.224 (2) | C4—C5 | 1.372 (3) |
| N1—C6 | 1.351 (3) | C4—H4A | 0.9300 |
| N1—C5 | 1.407 (3) | C5—C8 | 1.396 (3) |
| N1—H1A | 0.8600 | C6—C7 | 1.509 (3) |
| N2—C7 | 1.287 (2) | C7—C8 | 1.446 (3) |
| N2—N3 | 1.361 (2) | C9—C10 | 1.482 (3) |
| N3—C9 | 1.365 (2) | C10—C15 | 1.385 (3) |
| N3—H3A | 0.8600 | C10—C11 | 1.393 (3) |
| N4—C14 | 1.393 (3) | C11—C12 | 1.382 (3) |
| N4—H4C | 0.858 (10) | C11—H11A | 0.9300 |
| N4—H4B | 0.90 (3) | C12—C13 | 1.370 (3) |
| C1—C2 | 1.382 (3) | C12—H12A | 0.9300 |
| C1—C8 | 1.383 (3) | C13—C14 | 1.388 (3) |
| C1—H1B | 0.9300 | C13—H13A | 0.9300 |
| C2—C3 | 1.387 (3) | C14—C15 | 1.383 (3) |
| C2—H2A | 0.9300 | C15—H15A | 0.9300 |
| C3—C4 | 1.376 (3) | ||
| C6—N1—C5 | 112.13 (18) | N2—C7—C8 | 125.39 (19) |
| C6—N1—H1A | 123.9 | N2—C7—C6 | 128.0 (2) |
| C5—N1—H1A | 123.9 | C8—C7—C6 | 106.59 (17) |
| C7—N2—N3 | 116.52 (17) | C1—C8—C5 | 119.6 (2) |
| N2—N3—C9 | 118.39 (17) | C1—C8—C7 | 133.39 (19) |
| N2—N3—H3A | 120.8 | C5—C8—C7 | 107.01 (18) |
| C9—N3—H3A | 120.8 | O2—C9—N3 | 120.4 (2) |
| C14—N4—H4C | 117 (2) | O2—C9—C10 | 122.86 (19) |
| C14—N4—H4B | 113.9 (19) | N3—C9—C10 | 116.76 (18) |
| H4C—N4—H4B | 113 (3) | C15—C10—C11 | 119.5 (2) |
| C2—C1—C8 | 118.6 (2) | C15—C10—C9 | 116.88 (19) |
| C2—C1—H1B | 120.7 | C11—C10—C9 | 123.6 (2) |
| C8—C1—H1B | 120.7 | C12—C11—C10 | 118.7 (2) |
| C1—C2—C3 | 120.5 (2) | C12—C11—H11A | 120.6 |
| C1—C2—H2A | 119.7 | C10—C11—H11A | 120.6 |
| C3—C2—H2A | 119.7 | C13—C12—C11 | 121.2 (2) |
| C4—C3—C2 | 121.7 (2) | C13—C12—H12A | 119.4 |
| C4—C3—H3B | 119.2 | C11—C12—H12A | 119.4 |
| C2—C3—H3B | 119.2 | C12—C13—C14 | 120.9 (2) |
| C5—C4—C3 | 117.3 (2) | C12—C13—H13A | 119.6 |
| C5—C4—H4A | 121.4 | C14—C13—H13A | 119.6 |
| C3—C4—H4A | 121.4 | C15—C14—C13 | 117.9 (2) |
| C4—C5—C8 | 122.3 (2) | C15—C14—N4 | 120.5 (2) |
| C4—C5—N1 | 128.8 (2) | C13—C14—N4 | 121.5 (2) |
| C8—C5—N1 | 108.91 (19) | C14—C15—C10 | 121.7 (2) |
| O1—C6—N1 | 127.9 (2) | C14—C15—H15A | 119.1 |
| O1—C6—C7 | 126.8 (2) | C10—C15—H15A | 119.1 |
| N1—C6—C7 | 105.3 (2) | ||
| C7—N2—N3—C9 | −170.74 (18) | N1—C5—C8—C7 | 0.4 (2) |
| C8—C1—C2—C3 | −0.5 (3) | N2—C7—C8—C1 | 0.8 (4) |
| C1—C2—C3—C4 | 1.1 (4) | C6—C7—C8—C1 | 179.3 (2) |
| C2—C3—C4—C5 | −0.6 (3) | N2—C7—C8—C5 | −177.82 (19) |
| C3—C4—C5—C8 | −0.4 (3) | C6—C7—C8—C5 | 0.6 (2) |
| C3—C4—C5—N1 | 178.9 (2) | N2—N3—C9—O2 | −2.5 (3) |
| C6—N1—C5—C4 | 179.2 (2) | N2—N3—C9—C10 | 178.53 (17) |
| C6—N1—C5—C8 | −1.4 (2) | O2—C9—C10—C15 | −19.6 (3) |
| C5—N1—C6—O1 | −178.1 (2) | N3—C9—C10—C15 | 159.37 (19) |
| C5—N1—C6—C7 | 1.7 (2) | O2—C9—C10—C11 | 160.6 (2) |
| N3—N2—C7—C8 | 178.30 (18) | N3—C9—C10—C11 | −20.5 (3) |
| N3—N2—C7—C6 | 0.2 (3) | C15—C10—C11—C12 | −0.2 (3) |
| O1—C6—C7—N2 | −3.2 (4) | C9—C10—C11—C12 | 179.6 (2) |
| N1—C6—C7—N2 | 177.0 (2) | C10—C11—C12—C13 | −0.7 (4) |
| O1—C6—C7—C8 | 178.4 (2) | C11—C12—C13—C14 | 0.2 (4) |
| N1—C6—C7—C8 | −1.4 (2) | C12—C13—C14—C15 | 1.2 (4) |
| C2—C1—C8—C5 | −0.5 (3) | C12—C13—C14—N4 | 179.1 (2) |
| C2—C1—C8—C7 | −179.0 (2) | C13—C14—C15—C10 | −2.2 (3) |
| C4—C5—C8—C1 | 1.0 (3) | N4—C14—C15—C10 | 179.9 (2) |
| N1—C5—C8—C1 | −178.47 (19) | C11—C10—C15—C14 | 1.7 (3) |
| C4—C5—C8—C7 | 179.85 (19) | C9—C10—C15—C14 | −178.15 (19) |
Hydrogen-bond geometry (Å, °)
| D—H···A | D—H | H···A | D···A | D—H···A |
| N1—H1A···O2i | 0.86 | 2.02 | 2.785 (2) | 148 |
| N3—H3A···O1 | 0.86 | 2.09 | 2.757 (2) | 133 |
| N4—H4C···N2ii | 0.86 (2) | 2.61 (2) | 3.423 (3) | 158 (2) |
| C12—H12A···O1iii | 0.93 | 2.59 | 3.424 (3) | 149 |
Symmetry codes: (i) x, −y+1/2, z−1/2; (ii) −x+1, y+1/2, −z+1/2; (iii) −x+2, −y+1, −z.
Footnotes
Supplementary data and figures for this paper are available from the IUCr electronic archives (Reference: PV2431).
References
- Ashiq, U., Ara, R., Mahroof-Tahir, M., Maqsood, Z. T., Khan, K. M., Khan, S. N., Siddiqui, H. & Choudhary, M. I. (2008). Chem. Biodivers. 5, 82–92. [DOI] [PubMed]
- Bai, Z.-C., Li, H., Liu, Y. & Jing, Z.-L. (2006). Acta Cryst. E62, o2295–o2296.
- Bruker (2000). SADABS, SMART and SAINT Bruker AXS Inc., Madison, Wisconsin, USA.
- Maqsood, Z. T., Khan, K. M., Ashiq, U., Ara, R., Chohan, Z. H., Mahroof-Tahir, M. & Supuran, C. T. (2006). J. Enz. Inhib. Med. Chem. 21, 37–42. [DOI] [PubMed]
- Nardelli, M. (1995). J. Appl. Cryst. 28, 659.
- Sarangapani, M. & Reddy, V. M. (1994). Indian J. Pharm. Sci. 56, 174–177.
- Sheldrick, G. M. (2008). Acta Cryst. A64, 112–122. [DOI] [PubMed]
- Spek, A. L. (2009). Acta Cryst. D65, 148–155. [DOI] [PMC free article] [PubMed]
- Yang, J.-G. & Pan, F.-Y. (2004). Acta Cryst. E60, o2009–o2010.
Associated Data
This section collects any data citations, data availability statements, or supplementary materials included in this article.
Supplementary Materials
Crystal structure: contains datablock(s) global, I. DOI: 10.1107/S1600536811029242/pv2431sup1.cif
Structure factors: contains datablock(s) I. DOI: 10.1107/S1600536811029242/pv2431Isup2.hkl
Supplementary material file. DOI: 10.1107/S1600536811029242/pv2431Isup3.cml
Additional supplementary materials: crystallographic information; 3D view; checkCIF report


