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. Author manuscript; available in PMC: 2011 Nov 22.
Published in final edited form as: Am J Obstet Gynecol. 2010 Sep;203(3):283.e1–283.17. doi: 10.1016/j.ajog.2010.06.069

Obesity and diabetes genetic variants associated with gestational weight gain

Alison M Stuebe 1, Helen Lyon 5, Amy Herring 2, Joyee Ghosh 2, Alison Wise 2, Kari E North 3, Anna Maria Siega-Riz 3,4
PMCID: PMC3222335  NIHMSID: NIHMS223681  PMID: 20816152

Abstract

Objective

To determine whether genetic variants associated with diabetes and obesity predict gestational weight gain.

Study Design

960 participants in the Pregnancy, Infection and Nutrition cohorts were genotyped for 27 single-nucleotide polymorphisms (SNPs) associated with diabetes and obesity.

Results

Among white and black women (n=960), KCNQ1 risk allele carriage was directly associated with weight gain (p < 0.01). In Bayesian hierarchical models among white women (N=628), we found posterior odds ratios > 3 for inclusion of TCF2 and THADA SNPs in our models. Among black women (n=332), we found associations between risk allele carriage and weight gain for the THADA and INSIG2 SNPs. In Bayesian variable selection models, we found an interaction between the TSPAN8 risk allele and pre-gravid obesity, with lower weight gain among obese risk allele carriers.

Conclusion

We found evidence that diabetes and obesity risk alleles interact with maternal pre-gravid BMI to predict gestational weight gain.

Keywords: diabetes, gestational weight gain, genetics, obesity, single nucleotide polymorphisms

Introduction

Maternal weight gain during pregnancy is an important predictor of health outcomes for both mother and child1. Inadequate gestational weight gain is associated with preterm birth2, intrauterine growth restriction, low birth weight, and offspring obesity risk3, whereas mothers who gain excessively are more likely to deliver by cesarean section 47, have an unsuccessful trial of labor after c-section8, develop pre-eclampsia6, retain excessive weight after delivery9, 10, and become overweight or obese in later life11, 12. Infants born to women who gain excessively during pregnancy are more likely to be born preterm13, be macrosomic at birth (> 9 lbs)5, 14, 15, and become overweight or obese as toddlers16 and adults3. Based on these well-described epidemiologic associations, gestational weight gain has been targeted as a modifiable risk factor for metabolic disease in both mother and child.

While intervention strategies have targeted health behaviors that affect gestational weight gain, a mother’s genotype is also likely to influence her pattern of weight gain. Recent studies in non-pregnant populations have identified common genetic variants associated with diabetes and obesity. Family and twin studies suggest that 50% of obesity is attributable to genetic causes17. In a recent multicenter study, subjects homozygous for the FTO rs9939609 A allele had a 1.6-fold increased risk of obesity18. Variants in MC4R19 and INSIG220, as well as multiple gene regions recently identified by the GIANT consortium21, are also associated with body mass index (per-allele effect 0.06–0.33 kg/m2). In addition, association studies have identified common genes associated with type 2 diabetes2226, such as PPARG and TCF7L2.

Elucidating the role of genetic variants in gestational weight gain has important implications for public health. If genetic variants associated with diabetes and obesity are also linked with inappropriate weight gain, then excessive or inadequate gain may a marker for genetic predisposition to metabolic disease. No studies to our knowledge have measured the association between genetic variants associated with diabetes and obesity and gestational weight gain. We hypothesized that such genetic variants predict a mother’s total weight gain during pregnancy. We further hypothesized that a woman’s complement of diabetes and obesity risk alleles predicts whether she will gain in excess of IOM guidelines. Finally, we hypothesized that genotype modifies the association between pregravid BMI and gestational weight gain. To test these hypotheses, we measured such associations in a subset of women enrolled in the Pregnancy, Infection and Nutrition Study, 1998–2005, a longitudinal pregnancy cohort study.

Materials and Methods

The Pregnancy, Infection and Nutrition Cohort study comprises three prospective cohorts of more than 5000 women enrolled in early to mid-pregnancy. Participants enrolled in PIN1 and PIN2 were 24–29 weeks gestation at study entry, and were recruited from University of North Carolina Resident and Private Physician Obstetrics Clinic and the Wake County Department of Human Services and Wake Area Health Education Center prenatal care clinics from August 1995 through June 2000. Subjects enrolled in PIN3 were less than 20 weeks gestation at study entry and were recruited from the prenatal clinics at UNC hospitals from January 2001 to June 2005.

Extracted DNA was available for 1363 pregnancies that had undergone prior genotyping for case:control studies of preterm birth, small-for-gestational age birth weight, and placental vascular disease (Figure 1). For 132 pregnancies, there was insufficient DNA available for genotyping, leaving 1231 pregnancies eligible for our study. We allowed for only one pregnancy during the study period. If data were available for multiple pregnancies (N=21), we confirmed that the genotypes were concordant and included the pregnancy with the most complete SNP data. One pair of specimens was not concordant, so this subject was excluded. We further limited our analysis to self- identified black (n = 418) or white (n = 756) women, in order to avoid confounding by population stratification. As we considered ancestry, we removed women missing more than 20% of ancestral data (n = 61). We further removed black women for whom ancestry informative markers indicated a less than 10% probability of Yoruban ancestry (n = 3). Finally, we excluded women who were missing data on gestational age (n = 63), gestational weight gain (n = 64) or pre-gravid BMI (n =12, total removed = 149), leaving 960 women available for analysis (Figure 1).

Figure 1. Flow diagram.

Figure 1

Determination of pre-gravid BMI

Pre-gravid BMI was calculated based on self-reported pre-gravid weight and height at the first prenatal visit. Self-reported pre-gravid weights were examined for biological plausibility and imputed if deemed appropriate (<5% of weights were imputed). This imputed weight was calculated using the measured weight at the first prenatal visit (if taken prior to 15 weeks) minus the recommended amount of weight to be gained in the first and second trimesters as defined by the Institute of Medicine{Institute of Medicine, 1990 #1097}27.

Study covariates

The PIN datasets include information from telephone interviews, self-administered questionnaires, medical chart abstraction, and biological specimen collection. Information on race/ethnicity (non-Hispanic white, non-Hispanic black, and other) and maternal age was self-reported by the mother. Gestational age was estimated based on an algorithm that combined ultrasound dating with last menstrual period. If an ultrasound was done before 22 weeks gestation, it was used to date the pregnancy. If no ultrasound was done or it was done later in pregnancy, last menstrual period was used to date the pregnancy. In the PIN cohorts, 90.7% had an ultrasound that was used to date the pregnancy with the remaining 9.3% based on LMP.

Outcome assessment

Clinically obtained weights were recorded at each prenatal visit. We calculated gestational weight gain as the difference between pre-gravid self-reported weight and the last weight prior to delivery. We defined excessive or inadequate weight gain based on the 1990 Institute of Medicine (IOM) recommendations28; these were as follows: 28 to 40 lbs for low BMI (<19.8), 25–35 lbs for normal BMI (19.8 to 26.0), 15 to 25 lbs for overweight BMI (>26 to 29) and at least 15 pounds of gain for obese BMI (> 29). The IOM did not specify an upper limit for this group. For purposes of this analysis, excessive gain in the obese group was defined as greater than 18 lbs of gain, consistent with other analyses in the PIN cohorts. To calculate adequacy of gain for any given time point in pregnancy, the upper and lower limits of the weight gain intervals were extrapolated based on IOM-recommended rates of weight gain for the second and third trimesters29, consistent with earlier studies in this cohort3032.

Genotyping

The Sequenom iPLEX platform33 was used to genotype 27 SNPs associated with obesity and diabetes19, 2126, 34. For the purpose of quality control, 6 SNPs that had been previously assessed in the PIN cohorts were also genotyped. All SNPs were tested for Hardy-Weinberg equilibrium among self-identified white participants.

Population stratification

In genetic association studies, differences in allele frequency among ethnic groups can confound relationships between genotype and disease outcome. To address population stratification in this cohort, genotyping was performed for 37 ancestry-informative markers that have been successfully in other genetic association studies35. STRUCTURE was used to infer population substructure and assign individuals to populations using probabilistic clustering methods36. We analyzed self-identified white and black participants separately, and we included probability of Yoruban ancestry as a covariate among self-identified black women.

Statistical analysis

The DNA used for this study had been extracted for previous case:control studies of SGA, preterm birth and placental vascular disease, so prevalence of these outcomes was high. In order to produce estimates of the association between genotype and outcome that would approximate what we would have observed for the full study cohort, we calculated the probability of each participant’s inclusion in our study population. We used inverse probability weights to adjust our findings in all regression analyses. We used the SAS 9.2 surveylogistic and surveyreg for these analyses.

We used linear regression to model associations between maternal genotype and total gestational weight gain, adjusting for maternal age, linear and quadratic gestational age at birth, as well as probability of Yoruban ancestry among self-identified black women. We similarly used logistic regression to model associations between maternal genotype and probability of excessive gestational weight gain. We did not include in our models reproductive and obstetric factors that may be affected by genotype and may also affect weight gain, such as gestational diabetes and preeclampsia. These factors are potential intermediates on the causal pathway between genotype and weight gain, and including them in our models would attenuate the true association between maternal genotype and the outcome of interest. Moreover, because genotype may impact parity, we did not include parity as a covariate in our models.

We next considered models incorporating pre-gravid BMI in addition to gestational age and maternal age. Because the association between pre-gravid BMI and gestational weight gain is non-linear, both linear and quadratic terms were included. We then used hierarchical selection to model 1) Quadratic models including the joint effects of SNP allele carriage and interactions between SNP carriage and both log BMI and log BMI squared; 2) Linear models including the effects of SNP carriage and interactions between SNP carriage and log BMI; and 3) main effect models including only SNP allele carriage. If the Wald chi square p value for model 1 was < 0.05, the wald chi square p value for the quadratic interaction term was determined. If this was < 0.1, then the quadratic interaction term was retained. We similarly evaluated the linear model, retaining the interaction term if the SNP and SNP * log BMI p was < 0.05 and the SNP * log BMI term was < 0.1. Finally, we retained the main effects model if the p for the SNP term was < 0.05. To avoid false-positive findings due to small cell sizes, we excluded SNPs with fewer than 5 homozygous low or high-risk allele participants from these interaction models.

We did not to adjust alpha levels for multiple comparisons in this analysis. We recognize that this approach is may produce false positive associations. However, the purpose of our pilot study was to investigate the strength and direction of associations between these diabetes and obesity SNPs and gestational weight gain. All results should be viewed as exploratory findings pending confirmation in larger cohorts.

We next considered the simultaneous effects of multiple SNPs, using Bayesian models. For these analyses, we analyzed the data for subjects with complete information on genotypes using additive parameterization for SNPs. We used linear regression with gestational weight gain as the response variable, and SNP carriage, obesity and their interactions as covariates, adjusting for maternal age, linear and quadratic terms for gestational age at birth, and probability of Yoruban ancestry among self-identified black women. We avoided using a model with interactions between SNPs and log(BMI), log(BMI) squared as it would lead to a much larger model space and induce high correlations in the design matrix. The Bayesian variable selection framework allows each covariate to be either included or excluded from the model with a pre-assigned prior probability, which we chose as 0.5. After observing the data, the idea is to search over the list of all models, which includes models with no covariates, 1 covariate, …., all covariates, to identify the models which explain the observed data the best. With our choice of prior distributions, the prior odds ratio of including a covariate versus excluding is 1. We report the covariates with posterior (after observing the data) odds ratios greater than 3.

Results

Of the 79 SNPs genotyped, 71 genotyped for more than 90% of samples and were in Hardy-Weinberg equilibrium for the self-described White/Caucasian population. We anticipated that some SNPs would not be in HWE for African American participants due to admixture within African American populations in the US, and we found that one diabetes SNP and 4 of 37 ancestry-informative marker SNPs were not in HWE in this group. Our results were 99.5% concordant for SNPs that had previously been genotyped in the PIN cohort. Compared with white participants in our cohort, African American women were younger, had slightly higher pre-gravid BMIs, lower gestational weight gain and lower birth weight infants than Caucasian women (Table 1).

Table 1.

Characteristics of participants in the PIN3 study, n=960, mean (SD).

Caucasian African American
N 628 332
Maternal age 27.7 (6.2) 23.9 (5.3)
Pregravid BMI, kg/m2 25.0 (6.6) 27.4 (8.1)
GA at delivery, wks 40.1 (0.9) 39.9 (1.1)
Infant birth weight, g 3258 (672) 2939 (753)
Gestational weight gain, kg 15.3 (6.2) 13.4 (7.8)
Glucose loading test, mg/dL 108.4 (25.9) 105.6 (31.0)
Gestational diabetes, % (n) 7.2 (45) 5.7 (19)
Small-for-gestational age, % (n) 12.3 (77) 18.7 (62)
Birth<37 wks, % (n) 21.2 (133) 28.0 (93)
Excessive weight gain, % (n) 65.5 (411) 58.4 (194)

In linear regression analyses adjusted for maternal age and gestational age at birth and weighted to reflect the full PIN study population, we found associations between risk-allele carriage and gestational weight gain for several diabetes-associated variants (Table 2, Figure 1a and b). The KCNQ1 risk allele was associated with higher gestational weight gain (Caucasian 1 risk allele: 2.8 kg, 95% CI 0.4–5.1; 2 risk alleles: 2.9 kg, 95% CI 1.3 to 4.6; African American 1 risk allele: 3.4 kg, 95% CI 0.6 to 6.3; 2 risk alleles: 2.7 kg, 95% CI 0.5 to 4.8). Among Caucasian participants, PPARG risk allele carriage was associated with lower gestational weight gain (1 risk allele: −7.9 kg, 95% CI −15.4 to −0.4; 2 risk alleles: −7.6 kg, 95% CI −15.1 to −0.2). No African American participants were homozygous for the low-risk PPARG variant.

Table 2.

SNP frequencies and total gestational weight gain, kg, for Caucasian and African American participants in the PIN studies, n=960.

Gestational Weight Gain, kg
Caucasian
African-American
Gene / SNP Effect
allele /
other
allele
Risk
alleles
N* Mean
(SD)
Adjusted effect
estimate (95%
CI)
N* Mean
(SD)
Adjusted effect
estimate (95% CI)
N 628 332
PPARG C/G 0 7 21.7 (9.5) 0.00 (ref) 0 - -
rs1801282 1 118 14.8 (5.9)   −7.9 (−15.4, −0.4) 20 13.4 (8.5)   0.6 (−2.9, 4.1)
2 500 15.4 (6.2)   −7.6 (−15.1, −0.2) 309 13.4 (7.8) 0.00 (ref)
KCNJ11 C/T 0 243 15.5 (6.3) 0.00 (ref) 295 13.4 (7.8) 0.00 (ref)
rs5215 1 291 15.5 (6.1)   0.3 (−0.7, 1.3) 34 13.7 (7.8)   0.2 (−2.5, 3.0)
2 94 14.3 (6.6)   −0.7 (−2.1, 0.8) 3 17.6 (4.1)   4.5 (0.2, 8.7)
TCF7L2 T/C 0 285 15.5 (6.1) 0.00 (ref) 109 14.0 (7.4) 0.00 (ref)
rs7901695 1 277 15.4 (6.4)   −0.1 (−1.1, 0.9) 152 12.8 (8.1)   −1.5 (−3.5, 0.4)
2 65 14.2 (6.0)   −1.4 (−3.0, 0.2) 71 13.9 (7.7)   −0.4 (−2.6, 1.9)
TCF2 A/G 0 153 15.0 (5.9) 0.00 (ref) 145 13.1 (7.1) 0.00 (ref)
rs4430796 1 294 14.9 (6.2)   −0.7 (−1.8, 0.4) 150 13.5 (8.3)   0.4 (−1.5, 2.2)
2 179 16.3 (6.5)   1.1 (−0.2, 2.4) 37 14.7 (8.0)   0.1 (−3.1, 3.3)
WFS1 A/G 0 236 15.7 (6.0) 0.00 (ref) 136 14.2 (7.7) 0.00 (ref)
rs10010131 1 286 15.1 (6.5)   −0.8 (−1.8, 0.2) 158 12.9 (7.3)   −1.4 (−3.3, 0.5)
2 105 14.9 (6.1)   −0.4 (−1.7, 0.9) 38 12.8 (9.7)   −1.9 (−4.9, 1.1)
HHEX_IDE C/T 0 108 15.3 (6.6) 0.00 (ref) 17 13.3 (6.1) 0.00 (ref)
rsllll875 1 297 15.2 (6.6)   0.1 (−1.3, 1.5) 127 14.2 (7.9)   0.1 (−3.4, 3.6)
2 221 15.5 (5.5)   0.3 (−1.0, 1.7) 188 12.9 (7.8)   −0.3 (−3.7, 3.2)
SLC30A8 C/T 0 55 14.3 (7.2) 0.00 (ref) 3 12.3 (8.0) 0.00 (ref)
rs13266634 1 273 15.4 (6.2)   1.0 (−0.7, 2.7) 61 15.0 (8.5)   8.6 (1.4, 15.8)
2 300 15.4 (6.1)   1.2 (−0.5, 2.9) 268 13.1 (7.6)   6.0 (−0.8, 12.8)
CDKAL1 C/A 0 285 15.7 (6.7) 0.00 (ref) 45 12.0 (6.6) 0.00 (ref)
rs10946398 1 289 14.9 (5.9)   −1.0 (−2.0, 0.0) 162 13.9 (8.5)   2.6 (0.3, 4.8)
2 52 15.6 (5.3)   0.0 (−1.5, 1.5) 121 13.4 (7.2)   2.2 (−0.1, 4.5)
CDKN2A2B C/T 0 425 15.5 (6.2) 0.00 (ref) 287 13.1 (7.7) 0.00 (ref)
rs10811661 C/T 1 172 15.0 (6.3)   −0.2 (−1.3, 1.0) 42 15.1 (7.8)   2.5 (−0.4, 5.4)
2 21 13.6 (5.9)   −1.4 (−3.6, 0.8) 1 26.8 (.)   12.5 (11.0, 13.9)
IGF2BP2 T/G 0 276 15.6 (6.2) 0.00 (ref) 68 14.3 (7.0) 0.00 (ref)
rs4402960 1 275 15.2 (6.3)   −0.2 (−1.2, 0.8) 176 13.2 (8.3)   −0.3 (−2.6, 2.1)
2 74 14.8 (6.3)   −0.2 (−1.8, 1.4) 81 13.3 (7.4)   −0.8 (−3.3, 1.6)
JAZF1 T/C 0 152 14.8 (6.3) 0.00 (ref) 18 12.9 (8.0) 0.00 (ref)
rs864745 1 303 15.4 (6.0)   0.2 (−1.0, 1.4) 126 13.7 (7.7)   1.6 (−1.9, 5.1)
2 169 15.7 (6.5)   0.5 (−0.9, 1.9) 188 13.3 (7.8)   1.2 (−2.2, 4.6)
CDC123 G/A 0 424 15.3 (6.3) 0.00 (ref) 242 12.9 (7.8) 0.00 (ref)
rs12779790 1 176 15.5 (5.9)   0.4 (−0.7, 1.4) 82 14.8 (7.9)   2.0 (−0.1, 4.1)
2 18 15.2 (6.8)   −0.4 (−3.2, 2.5) 4 15.0 (7.1)   3.0 (0.4, 5.6)
TSPAN8 C/T 0 323 15.3 (6.0) 0.00 (ref) 220 13.5 (7.6) 0.00 (ref)
rs7961581 1 239 15.6 (6.6)   0.1 (−0.9, 1.2) 97 13.5 (8.0)   −1.3 (−3.2, 0.7)
2 56 13.5 (6.2)   −2.0 (−3.6, −0.4) 12 10.3 (9.1)   −1.6 (−6.2, 3.1)
THADA T/C 0 6 15.5 (2.5) 0.00 (ref) 24 15.5 (6.3) 0.00 (ref)
rs7578597 1 118 15.7 (6.8)   1.7 (−1.2, 4.5) 109 13.1 (7.9)   −3.3 (−5.9, −0.7)
2 496 15.2 (6.1)   0.7 (−2.0, 3.4) 197 13.4 (7.8)   −2.5 (−5.0, −0.1)
ADAMTS9 C/T 0 42 13.0 (7.1) 0.00 (ref) 28 12.6 (5.2) 0.00 (ref)
rs4607103 1 247 15.8 (5.9)   1.3 (−0.8, 3.4) 139 14.0 (9.2)   1.2 (−1.3, 3.8)
2 339 15.3 (6.3)   1.2 (−0.9, 3.3) 165 13.1 (6.8)   −0.6 (−2.9, 1.8)
NOTCH2 T/G 0 506 15.3 (6.2) 0.00 (ref) 153 13.8 (8.1) 0.00 (ref)
rs10923931 1 115 15.4 (6.5)   0.3 (−0.8, 1.5) 140 13.2 (7.5)   −0.9 (−2.8, 1.0)
2 4 16.0 (3.5)   −0.6 (−2.9, 1.7) 39 12.8 (7.8)   −1.1 (−4.3, 2.0)
KCNQ1 C/T 0 4 13.4 (1.6) 0.00 (ref) 2 5.9 (1.3) 0.00 (ref)
rs2237892 1 61 14.6 (6.6)   2.8 (0.4, 5.1) 51 14.1 (7.6)   3.4 (0.6, 6.3)
2 542 15.4 (6.2)   2.9 (1.3, 4.6) 273 13.3 (7.7)   2.7 (0.5, 4.8)
G6PC2 A/G 0 309 15.3 (6.1) 0.00 (ref) 286 13.2 (8.0) 0.00 (ref)
rs560887 1 262 15.1 (6.5)   0.4 (−0.6, 1.4) 42 14.7 (6.5)   2.1 (−0.1, 4.2)
2 52 15.9 (5.9)   1.3 (−0.2, 2.9) 0 - -
INSIG2 C/G 0 301 15.2 (6.6) 0.00 (ref) 183 12.8 (7.5) 0.00 (ref)
rs7566605 1 255 15.5 (6.1)   0.2 (−0.8, 1.2) 126 14.9 (8.0)   2.0 (0.2, 3.9)
2 72 15.4 (5.2)   0.2 (−1.1, 1.6) 22 10.5 (7.7)   −2.5 (−6.0, 1.1)
FTO A/T 0 246 15.5 (6.8) 0.00 (ref) 83 12.9 (8.5) 0.00 (ref)
rs9939609 1 270 14.9 (5.7)   −0.4 (−1.5, 0.6) 158 13.4 (8.0)   0.5 (−1.7, 2.7)
2 94 15.9 (6.4)   0.4 (−1.1, 1.9) 81 13.8 (7.0)   0.9 (−1.4, 3.3)
MC4R C/T 0 369 15.7 (6.1) 0.00 (ref) 162 12.5 (7.0) 0.00 (ref)
rs17782313 1 219 14.9 (6.5)   −0.7 (−1.7, 0.3) 135 14.2 (8.4)   1.1 (−0.8, 2.9)
2 34 13.9 (6.6)   −1.6 (−3.6, 0.4) 33 14.8 (8.7)   3.8 (0.0, 7.7)
TMEM18 C/T 0 19 14.4 (3.4) 0.00 (ref) 7 13.9 (6.1) 0.00 (ref)
rs6548238 1 167 15.2 (7.1)   1.1 (−0.8, 2.9) 58 15.1 (8.0)   2.9 (−2.4, 8.2)
2 441 15.4 (6.0)   1.4 (−0.3, 3.0) 266 13.0 (7.7)   0.7 (−4.4, 5.8)
GNPDA2 G/A 0 195 15.5 (6.6) 0.00 (ref) 185 13.0 (8.2) 0.00 (ref)
rs10938397 1 308 15.5 (5.7)   0.2 (−0.9, 1.3) 131 14.1 (7.4)   0.9 (−1.0, 2.7)
2 114 14.8 (6.4)   0.0 (−1.4, 1.5) 15 12.8 (5.9)   −1.0 (−4.1, 2.1)
SH2B1 G/A 0 249 15.5 (5.9) 0.00 (ref) 178 14.1 (7.8) 0.00 (ref)
rs7498665 1 280 15.2 (6.3)   −0.3 (−1.3, 0.8) 121 12.9 (7.3)   −0.5 (−2.4, 1.4)
2 98 15.4 (6.7)   −0.1 (−1.6, 1.3) 33 11.9 (9.2)   −2.3 (−5.5, 0.9)
MTCH2 G/A 0 257 15.8 (6.3) 0.00 (ref) 267 13.1 (7.8) 0.00 (ref)
rs10838738 1 289 14.9 (6.1)   −0.9 (−1.9, 0.2) 60 14.6 (7.4)   1.9 (0.0, 3.9)
2 82 15.1 (6.4)   −0.3 (−1.9, 1.3) 5 15.1 (9.1)   0.4 (−6.6, 7.3)
KCTD15 G/A 0 73 15.5 (6.1) 0.00 (ref) 50 11.3 (9.1) 0.00 (ref)
rs11084753 1 288 15.2 (6.6)   −0.1 (−1.6, 1.5) 155 13.7 (7.6)   1.1 (−1.8, 3.9)
2 262 15.3 (5.8)   0.0 (−1.5, 1.6) 126 13.9 (7.4)   1.3 (−1.6, 4.2)
NEGR1 T/C 0 97 16.1 (6.9) 0.00 (ref) 87 13.3 (6.6) 0.00 (ref)
rs2815752 1 285 15.1 (6.0)   −0.7 (−2.2, 0.7) 169 13.7 (8.0)   0.9 (−1.0, 2.8)
2 244 15.3 (6.2)   −0.4 (−1.9, 1.1) 76 13.0 (8.6)   0.9 (−1.7, 3.4)
*

Frequencies sum to less than 628 or 332 because participants were excluded from an analysis if their samples did not genotype successfully.

Model covariates include log pregravid BMI, log pregravid BMI squared, gestational age at birth, gestational age at birth squared, and maternal age. Effect estimates among self-identified African American participants further adjusted for probability of Yoruban ancestry. All models weighted to reflect the composition of the full PIN studies population.

We found different patterns of association for Caucasian and African American participants for several other diabetes-associated SNPs (Table 2, Figure 2a and 2b). Among Caucasian participants, we further identified associations between gestational weight gain and CKDAL1 as well as TSPAN8. Among African American participants, we found associations between gestational weight gain and CDKAL1, CDKN2A2B, KCNJ11, SLC30A8, CDC123, and THADA.

Figure 2. a and 2b: Diabetes-associated SNPs and gestational weight gain.

Figure 2

Figure 2

Multivariate-adjusted§ effect estimate (95% CI) for change in gestational weight gain associated with risk allele carriage for single nucleotide polymorphisms associated with diabetes in non-pregnant populations. Caucasian participants (n=628) on left, African-American participants (n=332) on right.

* p < 0.05 for partial F test for this SNP. # p < 0.05 for comparison with 0 risk alleles (referent).

§ Model covariates include log pregravid BMI, log pregravid BMI squared, gestational age at birth, gestational age at birth squared, and maternal age. Effect estimates among self-identified African American participants further adjusted for probability of Yoruban ancestry. All models weighted to reflect the composition of the full PIN studies population.

In our adjusted models for obesity-related risk variants (Table 2, Figure 3), we found higher gestational weight gain for African American participants with 2 MC4R risk alleles (3.8 kg, 95% CI 0.01 to 2.9), compared with women with no MC4R risk alleles. We found no other consistent patterns of association between obesity risk variants and gestational weight gain among African-American women, although individuals with one risk allele for INSIG2 had higher weight gain than women with 0 or 2 risk alleles. In contrast to our findings for MC4R among African American women, among Caucasian women, MC4R carriage was inversely associated with weight gain (1 risk allele: −0.7 kg, 95% CI −1.7 to 0.3; 2 risk alleles: −1.6 kg, 95% CI −3.6 to 0.4), although confidence intervals were wide.

Figure 3. Obesity-associated SNPs and gestational weight gain.

Figure 3

Multivariate-adjusted§ effect estimate (95% CI) for change in gestational weight gain associated with risk allele carriage for single nucleotide polymorphisms associated with obesity in non-pregnant populations. Caucasian participants (n=628) on left, African-American participants (n=332) on right.

* p < 0.05 for comparison with 0 risk alleles (referent).

§ Model covariates include log pregravid BMI, log pregravid BMI squared, gestational age at birth, gestational age at birth squared, and maternal age. Effect estimates among self-identified African American participants further adjusted for probability of Yoruban ancestry. All models weighted to reflect the composition of the full PIN studies population.

In logistic regression models of associations between diabetes SNPs and excessive gestational weight gain (Table 3, Figure 4a and 4b), we found higher risks for excessive gain among Caucasian participants with 2 copies of the TCF2 risk allele (OR 1.8, 95% CI 1.1–3.0, vs. 0 copies of the risk allele) or 2 copies of the G6PC2 risk allele (OR 2.4, 95% CI 1.1–5.0), and lower risks among participants with 2 copies of the TSPAN8 risk allele (OR 0.4, 95% CI 0.2–0.8, vs. 0 copies). Among African American participants, NOTCH2 risk allele carriage was associated with reduced risk for excess gain (OR for 1 risk allele 0.5, 95% CI 0.3–0.9; OR for 2 risk alleles, 0.5, 95% CI 0.2–1.1, vs 0 risk alleles). THADA risk allele carriage was also associated with less excessive gain (OR for 1 risk allele 0.2, 95% CI 0.1–0.8, and for 2 risk alleles, 0.3, 95% CI 0.1–0.9, vs. 0 risk alleles), but confidence intervals were wide. SLC30A8 risk allele carriage was associated with markedly increased excessive weight gain, but there were only 3 participants with 0 risk alleles in our study population, leading to imprecise effect estimates.

Table 3.

Risk allele carriage and odds of excessive gestational weight gain* for Caucasian and African American participants in the PIN studies, n=960.

Caucasian African-American
Effect
allele /
other
allele
Risk
alleles
Excessive
/ Total
Excessive
weight
gain, %
Adjusted OR
excessive
gain (95% CI)
Excessive
/ Total
Excessive
weight
gain, %
Adjusted OR
excessive gain
(95% CI)
411/628 65.5 194/332 58.4
PPARG C/G 0 5/7 71.4 1.0 (ref) ./.   .
rs1801282 1 72/118 61.0   0.6 (0.1, 3.4) 12/20 60.0 1.0 (ref)
2 332/500 66.4   0.8 (0.1, 3.9) 180/309 58.3   1.2 (0.4, 3.2)
KCNJ11 C/T 0 160/243 65.8 1.0 (ref) 171/295 58.0 1.0 (ref)
rs5215 1 188/291 64.6   0.9 (0.6, 1.4) 21/34 61.8   1.2 (0.5, 3.0)
2 63/94 67.0   1.0 (0.6, 1.8) 2/3 66.7   2.1 (0.2, 18.6)
TCF7L2 T/C 0 188/285 66.0 1.0 (ref) 68/109 62.4 1.0 (ref)
rs7901695 1 184/277 66.4   1.1 (0.7, 1.6) 83/152 54.6   0.6 (0.3, 1.1)
2 38/65 58.5   0.7 (0.4, 1.3) 43/71 60.6   0.7 (0.4, 1.5)
TCF2 A/G 0 92/153 60.1 1.0 (ref) 85/145 58.6 1.0 (ref)
rs4430796 1 190/294 64.6   1.2 (0.8, 1.9) 87/150 58.0   0.8 (0.5, 1.4)
2 129/179 72.1   1.8 (1.1, 3.0) 22/37 59.5   0.8 (0.3, 2.1)
WFS1 A/G 0 159/236 67.4 1.0 (ref) 87/136 64.0 1.0 (ref)
rs10010131 1 179/286 62.6   0.7 (0.5, 1.1) 87/158 55.1   0.6 (0.3, 1.0)
2 73/105 69.5   1.1 (0.6, 1.9) 20/38 52.6   0.6 (0.2, 1.4)
HHEX_IDE C/T 0 67/108 62.0 1.0 (ref) 12/17 70.6 1.0 (ref)
rsllll875 1 195/297 65.7   1.2 (0.7, 2.0) 79/127 62.2   0.8 (0.2, 2.6)
2 149/221 67.4   1.2 (0.7, 2.1) 103/188 54.8   0.6 (0.2, 2.1)
SLC30A8 C/T 0 37/55 67.3 1.0 (ref) 1/3 33.3 1.0 (ref)
rs13266634 1 182/273 66.7   1.2 (0.6, 2.3) 41/61 67.2   15.3 (1.4–167.5)
2 192/300 64.0   1.1 (0.6, 2.1) 152/268 56.7   10.9 (1.1–110.8)
CDKAL1 C/A 0 185/285 64.9 1.0 (ref) 25/45 55.6 1.0 (ref)
rs10946398 1 188/289 65.1   0.9 (0.6, 1.3) 100/162 61.7   1.5 (0.7, 3.3)
2 38/52 73.1   1.5 (0.8, 3.0) 67/121 55.4   1.3 (0.6, 2.9)
CDKN2A2B C/T 0 284/425 66.8 1.0 (ref) 165/287 57.5 1.0 (ref)
rs10811661 1 109/172 63.4   0.9 (0.6, 1.3) 27/42 64.3   1.3 (0.6, 2.7)
2 11/21 52.4   0.6 (0.2, 1.5) 1/1 100.0 -
IGF2BP2 T/G 0 190/276 68.8 1.0 (ref) 43/68 63.2 1.0 (ref)
rs4402960 1 169/275 61.5   0.7 (0.5, 1.0) 96/176 54.5   0.8 (0.4, 1.5)
2 51/74 68.9   0.9 (0.5, 1.7) 52/81 64.2   1.0 (0.5, 2.3)
JAZF1 T/C 0 91/152 59.9 1.0 (ref) 10/18 55.6 1.0 (ref)
rs864745 1 202/303 66.7   1.4 (0.9, 2.2) 76/126 60.3   1.5 (0.5, 5.0)
2 115/169 68.0   1.6 (1.0, 2.7) 108/188 57.4   1.2 (0.4, 3.9)
CDC123 G/A 0 275/424 64.9 1.0 (ref) 142/242 58.7 1.0 (ref)
rs12779790 1 119/176 67.6   1.1 (0.7, 1.7) 47/82 57.3   0.9 (0.5, 1.6)
2 13/18 72.2   1.4 (0.4, 5.1) 3/4 75.0   5.8 (0.7, 45.9)
TSPAN8 C/T 0 217/323 67.2 1.0 (ref) 128/220 58.2 1.0 (ref)
rs7961581 1 154/239 64.4   0.9 (0.6, 1.3) 57/97 58.8   0.8 (0.4, 1.4)
2 32/56 57.1   0.4 (0.2, 0.8) 6/12 50.0   0.9 (0.3, 3.1)
THADA T/C 0 4/6 66.7 1.0 (ref) 18/24 75.0 1.0 (ref)
rs7578597 1 78/118 66.1   1.2 (0.1, 11.1) 63/109 57.8   0.2 (0.1, 0.8)
2 322/496 64.9   1.1 (0.1, 9.5) 112/197 56.9   0.3 (0.1, 0.9)
ADAMTS9 C/T 0 23/42 54.8 1.0 (ref) 14/28 50.0 1.0 (ref)
rs4607103 1 174/247 70.4   2.0 (0.9, 4.2) 89/139 64.0   1.8 (0.7, 4.8)
2 214/339 63.1   1.5 (0.7, 3.0) 91/165 55.2   1.1 (0.4, 2.8)
NOTCH2 T/G 0 326/506 64.4 1.0 (ref) 101/153 66.0 1.0 (ref)
rs10923931 1 79/115 68.7   1.3 (0.8, 2.1) 74/140 52.9   0.5 (0.3, 0.9)
2 3/4 75.0   1.8 (0.2, 13.4) 19/39 48.7   0.5 (0.2, 1.1)
KCNQ1 C/T 0 2/4 50.0 1.0 (ref) 2/2 100.0 1.0 (ref)
rs2237892 1 37/61 60.7   1.7 (0.2, 14.5) 34/51 66.7 -
2 357/542 65.9   2.5 (0.3, 20.6) 154/273 56.4 -
G6PC2 A/G 0 197/309 63.8 1.0 (ref) 164/286 57.3 1.0 (ref)
rs560887 1 174/262 66.4   1.2 (0.8, 1.7) 28/42 66.7   1.8 (0.8, 4.0)
2 38/52 73.1   2.4 (1.1, 5.0) ./.   .
INSIG2 C/G 0 200/301 66.4 1.0 (ref) 101/183 55.2 1.0 (ref)
rs7566605 1 160/255 62.7   0.9 (0.6, 1.3) 82/126 65.1   1.6 (0.9, 2.7)
2 51/72 70.8   1.3 (0.7, 2.3) 11/22 50.0   0.6 (0.2, 1.7)
FTO A/T 0 162/246 65.9 1.0 (ref) 43/83 51.8 1.0 (ref)
rs9939609 1 172/270 63.7   1.1 (0.7, 1.6) 93/158 58.9   1.2 (0.6, 2.1)
2 65/94 69.1   1.2 (0.7, 2.2) 50/81 61.7   1.4 (0.7, 2.8)
MC4R C/T 0 251/369 68.0 1.0 (ref) 88/162 54.3 1.0 (ref)
rs17782313 1 137/219 62.6   0.7 (0.5, 1.1) 84/135 62.2   1.2 (0.7, 2.1)
2 21/34 61.8   0.9 (0.4, 2.0) 21/33 63.6   2.2 (0.9, 5.5)
TMEM18 C/T 0 13/19 68.4 1.0 (ref) 5/7 71.4 1.0 (ref)
rs6548238 1 107/167 64.1   0.8 (0.3, 2.4) 36/58 62.1   1.1 (0.2, 8.3)
2 290/441 65.8   0.8 (0.3, 2.4) 152/266 57.1   0.7 (0.1, 4.9)
GNPDA2 G/A 0 127/195 65.1 1.0 (ref) 103/185 55.7 1.0 (ref)
rs10938397 1 200/308 64.9   1.0 (0.7, 1.5) 82/131 62.6   1.4 (0.8, 2.3)
2 77/114 67.5   1.0 (0.6, 1.8) 8/15 53.3   0.9 (0.3, 2.8)
SH2B1 G/A 0 160/249 64.3 1.0 (ref) 100/178 56.2 1.0 (ref)
rs7498665 1 180/280 64.3   1.0 (0.7, 1.5) 74/121 61.2   1.2 (0.7, 2.2)
2 70/98 71.4   1.4 (0.8, 2.4) 20/33 60.6   1.1 (0.5, 2.7)
MTCH2 G/A 0 174/257 67.7 1.0 (ref) 148/267 55.4 1.0 (ref)
rs10838738 1 182/289 63.0   0.9 (0.6, 1.3) 43/60 71.7   3.1 (1.5, 6.5)
2 55/82 67.1   1.1 (0.6, 2.1) 3/5 60.0   0.7 (0.1, 5.7)
KCTD15 G/A 0 53/73 72.6 1.0 (ref) 24/50 48.0 1.0 (ref)
rs11084753 1 184/288 63.9   0.8 (0.4, 1.4) 95/155 61.3   1.2 (0.5, 2.5)
2 170/262 64.9   0.8 (0.4, 1.5) 74/126 58.7   1.3 (0.6, 2.9)
NEGR1 T/C 0 65/97 67.0 1.0 (ref) 49/87 56.3 1.0 (ref)
rs2815752 1 184/285 64.6   0.8 (0.5, 1.3) 103/169 60.9   1.1 (0.6, 2.1)
2 161/244 66.0   0.8 (0.5, 1.5) 42/76 55.3   1.1 (0.5, 2.3)
*

1990 Institute of Medicine (IOM) recommendations

Frequencies sum to less than 628 or 332 because participants were excluded from an analysis if their samples did not genotype successfully.

Model covariates include log pregravid BMI, log pregravid BMI squared and maternal age. Effect estimates among self-identified African American participants further adjusted for probability of Yoruban ancestry. All models weighted to reflect the composition of the full PIN studies population.

Figure 4. a and 4b: Diabetes-associated SNPs and excessive gestational weight gain.

Figure 4

Figure 4

Multivariate-adjusted§ odds ratio (95% CI) for excessive weight gain by risk allele carriage for single nucleotide polymorphisms associated with diabetes in non-pregnant populations. Caucasian participants (n=628) on left, African-American participants (n=332) on right.

* p < 0.05 for Wald Chi Square test; # p <0.05 for comparison with 0 risk alleles (referent).

§ Model covariates include log pregravid BMI, log pregravid BMI squared, and maternal age. Effect estimates among self-identified African American participants further adjusted for probability of Yoruban ancestry. All models weighted to reflect the composition of the full PIN studies population.

In our analysis of obesity SNPs and excessive weight gain (Table 3, Figure 5), carriage of one copy of the MTCH2 risk allele was associated with excessive gain among YRI participants (OR 3.1, 95% CI 1.5–6.5, vs 0 risk alleles). There were no statistically significant associations between obesity risk allele carriage and excessive weight gain risk among CEU participants (Figure 5).

Figure 5. Obesity-associated SNPs and excessive gestational weight gain.

Figure 5

Multivariate-adjusted§ odds ratio (95% CI) for excessive weight gain by risk allele carriage for single nucleotide polymorphisms associated with obesity in non-pregnant populations. Caucasian participants (n=628) on left, African-American participants (n=332) on right.

* p < 0.05 for Wald Chi Square test; # p <0.05 for comparison with 0 risk alleles (referent).

§ Model covariates include log pregravid BMI, log pregravid BMI squared, and maternal age. Effect estimates among self-identified African American participants further adjusted for probability of Yoruban ancestry. All models weighted to reflect the composition of the full PIN studies population.

We found interactions between risk allele carriage and pre-gravid BMI for TCF7L2, TCF2, CDKAL1, THADA, ADAMTS9, NOTCH2, FTO and TMEM18, as well as main effects for TSPAN8 (Figure 6). Among African-American participants, we found interactions between risk allele carriage and pre-gravid BMI for WFS1, ADAMTS9, TMEM18 and MTCH2 and main effects for THADA and INSIG2 (Figure 7).

Figure 6. Interactions between pre-gravid BMI and SNP carriage, Caucasian participants.

Figure 6

Multivariate-adjusted§ mean predicted gestational weight gain as a function of body mass index and risk allele carriage among self-identified Caucasian participants, N=628.

§ Model covariates include log pregravid BMI, log pregravid BMI squared, and maternal age. All models weighted to reflect the composition of the full PIN studies population.

Figure 7. Interactions between pre-gravid BMI and SNP carriage, African-American participants.

Figure 7

Multivariate-adjusted§ mean predicted gestational weight gain as a function of body mass index and risk allele carriage among self-identified African-American participants, N=332.

§ Model covariates include log pregravid BMI, log pregravid BMI squared, and maternal age, and probability of Yoruban ancestry. All models weighted to reflect the composition of the full PIN studies population.

Finally, we used Bayesian variable selection models to test the additive effect of multiple SNPs on gestational weight gain. Among Caucasian women, we found a posterior odds ratio > 3 for greater weight gain with carriage of the TCF2 risk allele (1.1 kg per allele, 95% CI 0 to 2.7, posterior OR 4.0) and for lower weight gain among obese women carrying the THADA risk allele (−1.7 kg per allele, 95% CI −4.2 to 0.07, posterior OR 4.26). Among African-American women, we found a posterior odds ratio >3 for an interaction between the TSPAN8 risk allele and obesity, with lower weight gain among obese risk allele carriers (−2.4 kg per allele, 95% CI −6.7 to 0.3, posterior OR 3.2).

Comment

In this prospective longitudinal study of pregnant women, we found several associations between diabetes and obesity SNPs and gestational weight gain. The effect of risk allele carriage varied with pre-gravid body mass index, suggesting that genotype may modify the effect of a woman’s body composition prior to pregnancy on weight gain trajectory.

Our findings confirm and extend earlier work on associations between diabetes and obesity SNPs and weight trajectory. We found greater weight gain among women with the Ala12Ala PPARG genotype than those with Pro12Pro genotype, although the number of Ala12Ala participants was small (N=7), and our findings may be sensitive to two of the seven Ala12Ala participants with weight gains of 28 and 40 kg. In a small study of women with gestational diabetes (N=62), Tok et al found greater weight gain among women with the Pro12Ala genotype than women with the Pro12Pro genotype. PPARG is expressed primarily in adipocytes, and this gene appears to regulate triglyceride storage in adipose tissue3739. It is plausible that Ala12Ala carriers have increased capacity for triglyceride storage, leading to greater gestational weight gain.

We also found greater gestational weight gain among women with one or two copies of the KCNQ1 risk allele, compared to homozygous low-risk women, although the number of low-risk homozygotes was low (4 Caucasian women and 2 African-American women). The low-risk KCNQ1 rs2237892 variant has been associated with increased c-peptide levels at 30 minutes after oral glucose load 40. It is plausible that more efficient insulin release lowers postprandial glucose concentrations and thus reduces gestational weight gain.

Among African-American participants, we found greater weight gain among MC4R high-risk homozygotes. The MC4R rs17782313 variant is associated with increased energy intake, increased total fat and protein intake, and greater weight gain over time in the predominantly-Caucasian Nurses’ Health Study cohort41. Interestingly, MC4R risk allele carriage was not associated with obesity among African-American children in a large case:control study42.

We also found interactions between pre-gravid BMI and genotype for several diabetes and obesity risk alleles in our population. These results suggest that a woman’s pre-gravid BMI as well as her genotype influence gestational weight gain. For example, in analyses of FTO rs9939609 risk allele carriage among Caucasian women, thin or obese women homozygous for the high risk allele gained more weight than low-risk allele carriers, but among women of average pre-gravid BMI, weight gain was similar regardless of allele carriage. These results suggest that it may be important to consider baseline BMI in longitudinal studies of genetic determinants of weight trajectory.

Our results must be interpreted within the context of the study design. Strengths of this study include our prospective collection of gestational weight gain data and the use of ancestry informative markers to adjust for population stratification. In addition, we used innovative techniques to model the role of pre-gravid BMI in modifying the effect of genotype on pregnancy phenotype. Our study also has several limitations. This is a secondary analysis of data collected over a 10-year period, and secular changes in medical recommendations, diet and physical activity, as well as the evolving nature of the PIN studies, may have modified the association between genotype and weight gain. Bias is also a concern, because we used samples from a subset of a larger cohort. Our use of sampling weights allowed us to produce estimates that approximate what we may have observed from a complete data set, but we were unable to adjust for the possibility that a woman’s willingness to allow genetic analysis or provide a blood sample may be non-random. Moreover, this is a pilot study, and our sample size was small, reducing our ability to detect differences among women with differing genotypes. In GWAS studies of obesity risk alleles and body mass index, risk allele carriage has been associated with differences of 0.10 to 0.33 kg/m221, which are considerably smaller than what we could detect in our population. In addition, pregnancy weight gain was measured in a clinical setting, without assessment of water weight vs. adipose tissue. Associated measurement error may further reduce our power to detect associations between genotype and outcome. At the same time, multiple testing is a concern. To address this issue, we limited our analysis to candidate SNPs that have been validated in multiple large studies. Nevertheless, we recognize that some of our findings may be false positives. With 18 diabetes SNPs and 2 comparisons for each SNP, we would expect to find 1.8 significant associations by chance alone, and with 9 obesity SNPs, we would expect to find 0.9 significant association by chance alone, if we conservatively assume independence of all SNPs.

In conclusion, we found evidence that maternal diabetes- and obesity-risk allele genotype interact with pre-gravid BMI to affect gestational weight gain. These results suggest that excessive or inadequate gain may be marker for maternal genotype, and these differences in genetic risk may explain some observed associations between gestational weight gain and long term health outcomes for mothers and infants. Further studies in larger cohorts will be needed to delineate further the role of genotype in maternal weight gain during pregnancy.

Acknowledgements

We would like to thank all of the PIN investigators that are not coauthors (David Savitz, John Thorp, Kelly Evenson, and Nancy Dole) for their help in obtaining funding and designing the study, and we would like to thank Kathryn Carrier for technical assistance. Additionally, we would like to thank the field collection staff for their dedication and hard work, and we would like to thank all the families involved in the PIN studies for their participation.

Funding: This study received support from the Eunice Kennedy Shriver National Institute of Child Health and Human Development (HD28684, HD28684A, HD37584, HD39373), the National Institute of Diabetes and Digestive and Kidney Diseases (DK61981, DK56350), the National Cancer Institute (CA109804-01), National Institute of Health General Clinical Research Center (RR00046), the Carolina Population Center, the UNC University Research Council and the Nutrition and Obesity Research Council (DK056350). Dr. Stuebe receives support from the WRHR Career Development Center at UNC (5K12HD050113-04). Dr. Ghosh receives support from NIEHS 5T32ES007018 and NIEHS P30 ES10126.

Footnotes

Publisher's Disclaimer: This is a PDF file of an unedited manuscript that has been accepted for publication. As a service to our customers we are providing this early version of the manuscript. The manuscript will undergo copyediting, typesetting, and review of the resulting proof before it is published in its final citable form. Please note that during the production process errors may be discovered which could affect the content, and all legal disclaimers that apply to the journal pertain.

Location where study was conducted: Central North Carolina.

Prior presentation: Preliminary findings were presented at the 30th Annual Meeting of the Society for Maternal-Fetal Medicine on February 5, 2010, Chicago, IL, as poster presentation #592.

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